Moc11g25640 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g25640
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 18765857 .. 18768084 (-)
RNA-Seq ExpressionMoc11g25640
SyntenyMoc11g25640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGAGTTCCATTTGGAATCCCTTAAAGCGCAGTACAATATTCTTGCCTTAATTGGTCTCTGCTTGTTTGAGGATGGCGAGACTGAGCATAATATGCTTTACTTCTCTTACACTCTTTAGGTAAAATATTTATGAATAAGGTCAACTTCGCTCTAGCTCAAGTCGTTCCCAATGAATGGGCAGTCCTCTATAGGCCTAGGGTTATTTGGTGGTTGAAATGTGAGGAGGAGGATGGCCCTATACTATTAAACACTAACCAGCTGCTCGCCTACTTCAAGGTGAAGAGGGCTCATAGGATGGGGAGCCGCTTCTATCTATGTATTTGGAAAATATTGGGCACAGTCATTGAGGGTCTTTCCTCTGTGAAGAAGAAGGAGAGAGAAATGGTTCTACGCTTCTAGGGACTGGCTCGCTCTAGATGAGCTGAACGAGCCTTCTTATGAGGTTCCTCACAGAATTGGAAATTTAGGTACAGTAAGCTTACTTTAGTTTCAAGTTCATTCCTTCTAATTGCGTACTTAATCATTTCTCTCTTTTACAGTGTCCTGAATACCTATACCAGAGCTGATCGAGAAGAGTATTAAAGTGTAACACCCCGACGTGACTTTCTACTGCCCTGAAGCTTAGACCCGTAGCCCAGCACATGAACCCGCCTCTCCGACGACTCGTTTTGCAATCTCAATGCCAACAGTAGCAGATTAGTGTGTTTCTTTGTTCCGGCGACAGTCGGTGTTGATCTATCCTTGTTCGGAGCTGGTTTTGAGTTACCCACACCTAAACGGGACTAGATTTGAGTTAACCGCCCCTATTTGGATCCAAATAGACGTTACCCATTGCTTTTCGGCAACGGACCAGCAAGTGCGTAGCCTTTCGAACTTGGATTTGGAAGCCCAAACCTCCTTGGCGTCGACCCACTCCTAACCCAAGCAGTTCTAGTGTGAGTTAGTAGGTAAAATTCACCAAAACTTTGTTTCGATTCAAATTAAGCGTTTTTAGATGAACTCTATCCCGAGTTTGGTTGTTTTTGGATTTAGGAACCTTTCGGCGAGCTTAGTAGCGTGTTAGGACCTTGGTAGTAAGTAGTTCTTACTTGGGGGATGTTTGTTGTTTCAATATGAATGAATTGTTTGGTGCTTTCTATGTGTTTATTATTCGTTAATATGTAAGTTGATTATCTCTTTGTGAATCTTGGCTAATGATTCTGAGTAGTTTAGATCAAATCATGTTTGTCCTGGTTGTTTATAACTGATTTGTTTTGCGTTGTTGGATTTGATGCTCAATAATATTTATGAAAGCATTATTGATTATGAATGGTTTTATCGTTGTACGTTTGTGTTCATAAAAAAGTACACTGAAATAATTTGGGATAAATCTGTTGTGTTGTGCATACATGTTGGACACGTCGTTTCATTATTAGCTTACTGTTTTTGGTTATGAAAGCAAGCTGGTTTTCTTGTGAGTTCAGTGCTTCATGGGTCATGGCCTAGAAAGTATGTAGTATAACTCTGGTGAGAGTTTGGTTCTATAATGAAGTGAATGGGTGAGTATCAGGGCATGAGGGCTGATACGTCACTAGTTGGTTGCCGAGGCTCCAAGTACAAAGGTCGGGGATCGATACGCCAATTGTGGATAAAGATGAGTGTCGAGACCTTAACTATGCATGGTTAGGGGTCGGCACAGTGAGTCTTAGTGGAAGACAAGTATTAGAGCCTTGAGAGAGAAGGACAAGGTCCAATAGCTTGCAAAGTCATCGATGCCTTAACTATGCGTCATTAGGGGTCTGTGCAATAGTTCGAGGCCTTGGCTATGCGTGGTCCAGGGTCGAATGCCAAGCGTCGTAGAGAAGTTGACTATCAAGGCTTGAGGCAACTTTTAGAAGTTGGATTAAGGCTGAATATTCGAGCAACTCATGATTCGCGTAGATCGACTCTTTAAGTAGTGACTCACAAAGGTAGGCTTTGAGAGGGCTAACATTTTAAGTTGGCATTGTTGACGTTGGAATATAACTCGTACAATTGGTGGATCGTGTAGTTCGACTTTTCAAGCATCTGTCTTAAGGTTTGTCTACCATGTTCCGACTTTTGGCCTTAGGAGAAATTCGCCTTGATAGCACATTGTTAAGTTTAGAGCTTCGCGAAGTTCGGCTTAATCTTTTGCTTAAGTTGCTAATGACACATTGCTTGAGTTTGGAGCTTTGCGAACTCAGCTTAAGCTTGCGCGGCTAA

mRNA sequence

ATGCCAGAGTTCCATTTGGAATCCCTTAAAGCGCAGTACAATATTCTTGCCTTAATTGGTAAAATATTTATGAATAAGGTCAACTTCGCTCTAGCTCAAGTCGTTCCCAATGAATGGGCAGTCCTCTATAGGCCTAGGGTTATTTGGTGGTTGAAATGTGAGGAGGAGGATGGCCCTATACTATTAAACACTAACCAGCTGCTCGCCTACTTCAAGGTGAAGAGGGCTCATAGGATGGGGAGCCGCTTCTATCTATGTATTTGGAAAATATTGGGCACAGTCATTGAGGGTCTTTCCTCTGTGAAGAAGAAGGAGAGAGAAATGGGCATGAGGGCTGATACGTCACTAGTTGGTTGCCGAGGCTCCAAGTACAAAGGTCGGGGATCGATACGCCAATTGTGGATAAAGATGAGTGTCGAGACCTTAACTATGCATGGGTCGAATGCCAAGCGTCGTAGAGAAGTTGACTATCAAGGCTTGAGGCAACTTTTAGAAGTTGGATTAAGGCTGAATATTCGAGCAACTCATGATTCGCGAGAAATTCGCCTTGATAGCACATTGTTAAGTTTAGAGCTTCGCGAAGTTCGGCTTAATCTTTTGCTTAAGTTGCTAATGACACATTGCTTGAGTTTGGAGCTTTGCGAACTCAGCTTAAGCTTGCGCGGCTAA

Coding sequence (CDS)

ATGCCAGAGTTCCATTTGGAATCCCTTAAAGCGCAGTACAATATTCTTGCCTTAATTGGTAAAATATTTATGAATAAGGTCAACTTCGCTCTAGCTCAAGTCGTTCCCAATGAATGGGCAGTCCTCTATAGGCCTAGGGTTATTTGGTGGTTGAAATGTGAGGAGGAGGATGGCCCTATACTATTAAACACTAACCAGCTGCTCGCCTACTTCAAGGTGAAGAGGGCTCATAGGATGGGGAGCCGCTTCTATCTATGTATTTGGAAAATATTGGGCACAGTCATTGAGGGTCTTTCCTCTGTGAAGAAGAAGGAGAGAGAAATGGGCATGAGGGCTGATACGTCACTAGTTGGTTGCCGAGGCTCCAAGTACAAAGGTCGGGGATCGATACGCCAATTGTGGATAAAGATGAGTGTCGAGACCTTAACTATGCATGGGTCGAATGCCAAGCGTCGTAGAGAAGTTGACTATCAAGGCTTGAGGCAACTTTTAGAAGTTGGATTAAGGCTGAATATTCGAGCAACTCATGATTCGCGAGAAATTCGCCTTGATAGCACATTGTTAAGTTTAGAGCTTCGCGAAGTTCGGCTTAATCTTTTGCTTAAGTTGCTAATGACACATTGCTTGAGTTTGGAGCTTTGCGAACTCAGCTTAAGCTTGCGCGGCTAA

Protein sequence

MPEFHLESLKAQYNILALIGKIFMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSRFYLCIWKILGTVIEGLSSVKKKEREMGMRADTSLVGCRGSKYKGRGSIRQLWIKMSVETLTMHGSNAKRRREVDYQGLRQLLEVGLRLNIRATHDSREIRLDSTLLSLELREVRLNLLLKLLMTHCLSLELCELSLSLRG
Homology
[Close]
BLAST of Moc11g25640 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 77  FYMCARKGAGGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 77  FYMCARKGAGGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   L + +QLLA F+ KR  +   R
Sbjct: 110 FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGR 169

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 170 FYMCARKGAGGIVKGPTSIK 189

[Close]
BLAST of Moc11g25640 vs. NCBI nr
Match: XP_022158650.1 (uncharacterized protein LOC111025108 [Momordica charantia])

HSP 1 Score: 65.1 bits (157), Expect = 8.8e-07
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K    +++G +S+K
Sbjct: 77  FYMCARKGADGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. NCBI nr
Match: XP_022155229.1 (uncharacterized protein LOC111022371 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRVRDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K    +++G +S+K
Sbjct: 77  FYMCARKGAXGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 77  FYMCARKGAGGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 77  FYMCARKGAGGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   L + +QLLA F+ KR  +   R
Sbjct: 110 FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGR 169

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K  G +++G +S+K
Sbjct: 170 FYMCARKGAGGIVKGPTSIK 189

[Close]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match: A0A6J1DWF1 (uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025108 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.3e-07
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K    +++G +S+K
Sbjct: 77  FYMCARKGADGIVKGPTSIK 96

[Close]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match: A0A6J1DPM7 (uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022371 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.6e-07
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 23  FMNKVNFALAQVVPNEWAVLYRPRVIWWLKCEEEDGPILLNTNQLLAYFKVKRAHRMGSR 82
           F+ +   A AQV PN W V++   +++WL+  + +   LL+ +QLLA F+ KR  +   R
Sbjct: 17  FLFRTGLAPAQVAPNGWGVIFALAILFWLRVRDSEEAELLDVDQLLACFEAKRIAKKPGR 76

Query: 83  FYLCIWKILGTVIEGLSSVK 103
           FY+C  K    +++G +S+K
Sbjct: 77  FYMCARKGAXGIVKGPTSIK 96

The following BLAST results are available for this feature:
BLAST of Moc11g25640 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158122.11.4e-0736.25uncharacterized protein LOC111024680 [Momordica charantia][more]
XP_022144034.11.4e-0736.25uncharacterized protein LOC111013826 [Momordica charantia][more]
XP_022159063.15.2e-0735.00uncharacterized protein LOC111025502, partial [Momordica charantia][more]
XP_022158650.18.8e-0735.00uncharacterized protein LOC111025108 [Momordica charantia][more]
XP_022155229.11.2e-0635.00uncharacterized protein LOC111022371 [Momordica charantia][more]
BLAST of Moc11g25640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CR426.6e-0836.25uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DWD26.6e-0836.25uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DXS52.5e-0735.00uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DWF14.3e-0735.00uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DPM75.6e-0735.00uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Moc11g25640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g25640.1Moc11g25640.1mRNA