Moc11g14710 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g14710
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Locationchr11: 10987221 .. 10988756 (+)
RNA-Seq ExpressionMoc11g14710
SyntenyMoc11g14710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCTCAAGTTAGTAAGAACTGATCTATACTCTCAGGACGAGTATAACACTCAAATCTTAGCTAGGATTCGGACCAAGATTTGGCAATTAATTGCCCCAACATTTCCCTGCGACCTGACTGCATCACTGTCTTTATCTGAGCTACACTTAGAAGAGCATGTTGGGTTTTGGCAAAATATTGGAATGGAAGTTGTCCCAGATTGGAAAAGTAGAAGGATGGAGATCCAAGTGCTAGAAGTTGTCCCACATCGGAAAGGTACAAGAGGGGGGTGTGTTCCAACTACTATAAAAGGAGTCTATGACCTTGGGTTTTAATCATCCCAATTGAAAAACTTTAAGCCTAGTGTACCAGCTCTAGTTAACTGAGCGGTATTTGCTTTGACAGAGTGTTTTGTGTAATTAAGGTCGGGGAGAGAAATCTATGTAATTGTGATAATTTTTCACATAGTGGATTTTTCCTTGTGGCCCGTGGTTTTTTATCGGATTTGGAGTTTTCCACATTAATTCTTGTGTTTCTTTATTTTATTGCTTTCTTTAAATTTTCTGTTTATTCTTGCGATAAAAAGTAGGGGATTTTTTCCCATCAAGTGGTATCAGAGCTTTAGGTTTGTAGTTAGCTTCGGTTCTGTGAATAGTATGGGTTGTTCACTATTTGCAAATTCGCCAGGAGTGTGAAGCATATATGTCATTCTTTATGAGTCTAGTGAAGATTAACGTGGAGAAATTTGATTGAAGGATCAATTTTTGTTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCATTGAAGGGAAGACTAGGCCATGATGTTTCTGAAAAGCTAAGCGGTGATTGTGGTTCAGTGGAGTCCAGCAGAGGTTCTAAGAAGTCCAACATGAGTGATGAAGATTGGAAGGAAATGAATTTGAGGGCTGCAAGCGCGATACGAACAGGTTTGATTAAAAATAATCTTGCAAATGTACATGGAATTTCAATAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATTAGGCAAAGGACATCTCAAATCGACTGTACCTGAAGGAGCAGTTTCACACGTTGCGAATGGAAGAAGGTACGAAAATTTCAAATCATCTGAGTAATCTCAATAGCATCATCTTTGAGCTGCAGGAAAGATCGAAGTGAAGATAGATGACGAAAATAAGACACTCATACTCAACTTGTCACTACCACTTTCTTATGAACACATGAAGTCGATCTTGATATATGGGAATGATACTTTGAATTTTGTCGAGACTACTAATAAACTATTGTTAGAGGAAAGAAGTCTGAAGAGTGAAGGTCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGAACAAAAGAAAGCTTGTTGTTGGGGATGCGAACAGTCTAGGCATATGAAGAAAGATTGTCCTAACAGAGTCAATTCGTCAAAGGGCTCTGGGTCGGATGCTGACAGTGTTTCTCTCATCAGGGGAGAGAATGATCTCTTCCTTTGA

mRNA sequence

ATGACGCTCAAGTTAGTAAGAACTGATCTATACTCTCAGGACGAGTATAACACTCAAATCTTAGCTAGGATTCGGACCAAGATTTGGCAATTAATTGCCCCAACATTTCCCTGCGACCTGACTGCATCACTGTCTTTATCTGAGCTACACTTAGAAGAGCATGTTGGGTTTTGGCAAAATATTGGAATGGAAGTTGTCCCAGATTGGAAAAGTAGAAGGATGGAGATCCAAGTGCTAGAAGTTGTCCCACATCGGAAAGGTACAAGAGGGGGGATCAATTTTTGTTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCATTGAAGGGAAGACTAGGCCATGATGTTTCTGAAAAGCTAAGCGGTGATTGTGGTTCAGTGGAGTCCAGCAGAGGTTCTAAGAAGTCCAACATGAGTGATGAAGATTGGAAGGAAATGAATTTGAGGGCTGCAAGCGCGATACGAACAGGAAAGATCGAAGTGAAGATAGATGACGAAAATAAGACACTCATACTCAACTTGTCACTACCACTTTCTTATGAACACATGAAGTCGATCTTGATATATGGGAATGATACTTTGAATTTTGTCGAGACTACTAATAAACTATTGTTAGAGGAAAGAAGTCTGAAGAGTGAAGGTCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGAACAAAAGAAAGCTTGTTGTTGGGGATGCGAACAGTCTAGGCATATGAAGAAAGATTGTCCTAACAGAGTCAATTCGTCAAAGGGCTCTGGGTCGGATGCTGACAGTGTTTCTCTCATCAGGGGAGAGAATGATCTCTTCCTTTGA

Coding sequence (CDS)

ATGACGCTCAAGTTAGTAAGAACTGATCTATACTCTCAGGACGAGTATAACACTCAAATCTTAGCTAGGATTCGGACCAAGATTTGGCAATTAATTGCCCCAACATTTCCCTGCGACCTGACTGCATCACTGTCTTTATCTGAGCTACACTTAGAAGAGCATGTTGGGTTTTGGCAAAATATTGGAATGGAAGTTGTCCCAGATTGGAAAAGTAGAAGGATGGAGATCCAAGTGCTAGAAGTTGTCCCACATCGGAAAGGTACAAGAGGGGGGATCAATTTTTGTTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCATTGAAGGGAAGACTAGGCCATGATGTTTCTGAAAAGCTAAGCGGTGATTGTGGTTCAGTGGAGTCCAGCAGAGGTTCTAAGAAGTCCAACATGAGTGATGAAGATTGGAAGGAAATGAATTTGAGGGCTGCAAGCGCGATACGAACAGGAAAGATCGAAGTGAAGATAGATGACGAAAATAAGACACTCATACTCAACTTGTCACTACCACTTTCTTATGAACACATGAAGTCGATCTTGATATATGGGAATGATACTTTGAATTTTGTCGAGACTACTAATAAACTATTGTTAGAGGAAAGAAGTCTGAAGAGTGAAGGTCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCGAACAAAAGAAAGCTTGTTGTTGGGGATGCGAACAGTCTAGGCATATGAAGAAAGATTGTCCTAACAGAGTCAATTCGTCAAAGGGCTCTGGGTCGGATGCTGACAGTGTTTCTCTCATCAGGGGAGAGAATGATCTCTTCCTTTGA

Protein sequence

MTLKLVRTDLYSQDEYNTQILARIRTKIWQLIAPTFPCDLTASLSLSELHLEEHVGFWQNIGMEVVPDWKSRRMEIQVLEVVPHRKGTRGGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDWKEMNLRAASAIRTGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNFVETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPNRVNSSKGSGSDADSVSLIRGENDLFL
Homology
BLAST of Moc11g14710 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 7.8e-56
Identity = 139/245 (56.73%), Postives = 146/245 (59.59%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVE----SSRGSKKSNMS 149
           G INF LWQVQVKDVLIQS LHKALKGR     SEKLS D G +E    SSRGSKKS+MS
Sbjct: 311 GMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSRGSKKSSMS 370

Query: 150 DEDWKEMNLRAASAIRTG------------------------------------------ 209
            EDW+EM+LRAASAIRT                                           
Sbjct: 371 YEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLKEQFH 430

Query: 210 -------------------------KIEVKIDDENKTLILNLSLPLSYEHMKSILIYGND 264
                                     IEVKIDDE+K L L LSLP SYEHMK IL+YG D
Sbjct: 431 TLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSLPXSYEHMKPILMYGKD 490

BLAST of Moc11g14710 vs. NCBI nr
Match: KAE8709065.1 (hypothetical protein F3Y22_tig00110332pilonHSYRG00834 [Hibiscus syriacus])

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-31
Identity = 99/236 (41.95%), Postives = 128/236 (54.24%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 12  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 71

Query: 150 KEMNLRAASAIR-------------------------------------TGKIEVKIDDE 209
           +E+++RAAS IR                                        I VKIDDE
Sbjct: 72  EELDMRAASQIRLCLAKNVLANEKFHKLQMEEGTKISDHLSALNGIVSELESIGVKIDDE 131

Query: 210 NKTLILNLSLPLSYEHMKSILIYGNDTLNFVETTNKLLLEERSLKSEGRTSHEDSALVAS 269
           +K L L  SLP SYEHM+++L+Y  + +NF E T+KL+ EER LK+    S E  AL   
Sbjct: 132 DKALRLIWSLPSSYEHMQTVLMYEKENVNFSEVTSKLISEERRLKNGENKSSESGALSVC 191

Query: 270 NWKKKKDSEQKKACCWGCEQSRHMKKDCPN-RVNSSKGSGSDADSVSLIRGENDLF 288
             +KK    ++K  CWGC Q  H+K DC N   NS+  S SD  +V +   E+D F
Sbjct: 192 GNRKKYKGSKRKIICWGCGQPGHLKNDCKNGGANSANDSKSDVTNVVVFENEDDEF 245

BLAST of Moc11g14710 vs. NCBI nr
Match: KAE8717380.1 (hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus])

HSP 1 Score: 145.6 bits (366), Expect = 6.7e-31
Identity = 103/267 (38.58%), Postives = 133/267 (49.81%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 12  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 71

Query: 150 KEMNLRAASAIR------------------------------------------------ 209
           +E+++RAAS IR                                                
Sbjct: 72  EELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLYLKEKFHKLQM 131

Query: 210 -------------------TGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNF 269
                                 I V+IDDE+K L L  SLP SYEHM+++L+YG + +NF
Sbjct: 132 EEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQTVLMYGKENVNF 191

Query: 270 VETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPN 289
            E T+KL+ EER LK+    S E  AL     +KK    +KK  CWGC Q  H+KKDC N
Sbjct: 192 SEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGHLKKDCKN 251

BLAST of Moc11g14710 vs. NCBI nr
Match: KAF3622233.1 (hypothetical protein FXO38_31400 [Capsicum annuum] >KAF3630407.1 hypothetical protein FXO37_28487 [Capsicum annuum])

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-30
Identity = 109/277 (39.35%), Postives = 137/277 (49.46%), Query Frame = 0

Query: 82  VPHR---KGTR-------GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCG 141
           VPH    +GT+       G INF +WQVQVKDVLIQSGLHKALK R     SEK + D  
Sbjct: 63  VPHEHMLEGTKFEIEKFDGRINFGVWQVQVKDVLIQSGLHKALKER---PTSEKGNKDSE 122

Query: 142 SVESSRGSKKSNMSDEDWKEMNLRAASAIR------------------------------ 201
             ESS+ S+KS +SDE+W+E++++AAS IR                              
Sbjct: 123 KSESSKDSEKSKISDEEWEELDMKAASQIRLYLAKNVLANVIGLSTTKELWEKLEELYQT 182

Query: 202 -------------------------------------TGKIEVKIDDENKTLILNLSLPL 261
                                                   I VKI+DE+K L L   LP 
Sbjct: 183 KSISNRLYLKEQFHKLQMAEGTTISDHLSVLNGIVSELESIGVKINDEDKALRLIWFLPS 242

Query: 262 SYEHMKSILIYGNDTLNFVETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKK 280
           SY+HM+ ILIYG  T+ FVE T+KL+ EE+ LK+    S EDSALV     K K S +KK
Sbjct: 243 SYKHMQPILIYGKKTVIFVEVTSKLISEEKRLKNGDEKSLEDSALVVKG--KWKQSSKKK 302

BLAST of Moc11g14710 vs. NCBI nr
Match: XP_039060075.1 (G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Hibiscus syriacus])

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-30
Identity = 102/266 (38.35%), Postives = 131/266 (49.25%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    + E    D  S +SS    KS MS+E+W
Sbjct: 474 GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLFEGKEPDKPS-DSSGDKGKSKMSEEEW 533

Query: 150 KEMNLRAASAIR------------------------------------------------ 209
           +E+++RAAS IR                                                
Sbjct: 534 EELDMRAASQIRLCLAKNVLANVARWSSTKELWENLEEMYKAKSLSNRLYLKEKFHKLQM 593

Query: 210 -------------------TGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNF 269
                                 I V+IDDE+K L L  SLP SYEHM+++L+YG + +NF
Sbjct: 594 EEGTKISDHLSALNGIVSEMESIGVEIDDEDKALRLIWSLPSSYEHMQTVLMYGKENVNF 653

Query: 270 VETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPN 288
            E T+KL+ EER LK+    S E  AL     +KK    +KK  CWGC Q  H+KKDC N
Sbjct: 654 SEVTSKLISEERRLKNGENKSSESEALSVCGNRKKYKGSKKKIICWGCGQPGHLKKDCKN 713

BLAST of Moc11g14710 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 64/270 (23.70%), Postives = 110/270 (40.74%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEK-----LSGDCGSVESSRGSK---- 149
           G   F  WQ +++D+LIQ GLHK L      DV  K      + D   ++    S     
Sbjct: 13  GDNGFSTWQRRMRDLLIQQGLHKVL------DVDSKKPDTMKAEDWADLDERAASAIRLH 72

Query: 150 -----KSNMSDED-----WKEMNLRAASAIRTGK-------------------------- 209
                 +N+ DED     W  +     S   T K                          
Sbjct: 73  LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 132

Query: 210 --------IEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNFVETTNKLLLEER-- 269
                   + VKI++E+K ++L  SLP SY+++ + +++G  T+   + T+ LLL E+  
Sbjct: 133 GLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMR 192

Query: 270 --------SLKSEGR-----TSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCP 289
                   +L +EGR      S  +     +  K K  S+ +   C+ C Q  H K+DCP
Sbjct: 193 KKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCP 252

BLAST of Moc11g14710 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.8e-56
Identity = 139/245 (56.73%), Postives = 146/245 (59.59%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVE----SSRGSKKSNMS 149
           G INF LWQVQVKDVLIQS LHKALKGR     SEKLS D G +E    SSRGSKKS+MS
Sbjct: 311 GMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSRGSKKSSMS 370

Query: 150 DEDWKEMNLRAASAIRTG------------------------------------------ 209
            EDW+EM+LRAASAIRT                                           
Sbjct: 371 YEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLKEQFH 430

Query: 210 -------------------------KIEVKIDDENKTLILNLSLPLSYEHMKSILIYGND 264
                                     IEVKIDDE+K L L LSLP SYEHMK IL+YG D
Sbjct: 431 TLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALRLILSLPXSYEHMKPILMYGKD 490

BLAST of Moc11g14710 vs. ExPASy TrEMBL
Match: A0A6A3B141 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110332pilonHSYRG00834 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.5e-32
Identity = 99/236 (41.95%), Postives = 128/236 (54.24%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 12  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 71

Query: 150 KEMNLRAASAIR-------------------------------------TGKIEVKIDDE 209
           +E+++RAAS IR                                        I VKIDDE
Sbjct: 72  EELDMRAASQIRLCLAKNVLANEKFHKLQMEEGTKISDHLSALNGIVSELESIGVKIDDE 131

Query: 210 NKTLILNLSLPLSYEHMKSILIYGNDTLNFVETTNKLLLEERSLKSEGRTSHEDSALVAS 269
           +K L L  SLP SYEHM+++L+Y  + +NF E T+KL+ EER LK+    S E  AL   
Sbjct: 132 DKALRLIWSLPSSYEHMQTVLMYEKENVNFSEVTSKLISEERRLKNGENKSSESGALSVC 191

Query: 270 NWKKKKDSEQKKACCWGCEQSRHMKKDCPN-RVNSSKGSGSDADSVSLIRGENDLF 288
             +KK    ++K  CWGC Q  H+K DC N   NS+  S SD  +V +   E+D F
Sbjct: 192 GNRKKYKGSKRKIICWGCGQPGHLKNDCKNGGANSANDSKSDVTNVVVFENEDDEF 245

BLAST of Moc11g14710 vs. ExPASy TrEMBL
Match: A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.2e-31
Identity = 103/267 (38.58%), Postives = 133/267 (49.81%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 12  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 71

Query: 150 KEMNLRAASAIR------------------------------------------------ 209
           +E+++RAAS IR                                                
Sbjct: 72  EELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLYLKEKFHKLQM 131

Query: 210 -------------------TGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNF 269
                                 I V+IDDE+K L L  SLP SYEHM+++L+YG + +NF
Sbjct: 132 EEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQTVLMYGKENVNF 191

Query: 270 VETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPN 289
            E T+KL+ EER LK+    S E  AL     +KK    +KK  CWGC Q  H+KKDC N
Sbjct: 192 SEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGHLKKDCKN 251

BLAST of Moc11g14710 vs. ExPASy TrEMBL
Match: A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-30
Identity = 102/267 (38.20%), Postives = 131/267 (49.06%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 12  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 71

Query: 150 KEMNLRAASAIR------------------------------------------------ 209
           +E+++RAAS IR                                                
Sbjct: 72  EELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLYLKEKFHKLQM 131

Query: 210 -------------------TGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNF 269
                                 I V IDDE+K L L  SLP SYEHM+++L+YG + +NF
Sbjct: 132 EEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIWSLPSSYEHMQTVLMYGKENVNF 191

Query: 270 VETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPN 289
            E T+KL+ EER LK+    S E  AL     +KK    +KK  CWGC Q  H+KKDC N
Sbjct: 192 SEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGHLKKDCKN 251

BLAST of Moc11g14710 vs. ExPASy TrEMBL
Match: A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-30
Identity = 102/267 (38.20%), Postives = 132/267 (49.44%), Query Frame = 0

Query: 90  GGINFCLWQVQVKDVLIQSGLHKALKGRLGHDVSEKLSGDCGSVESSRGSKKSNMSDEDW 149
           G INF LWQVQVKD+LIQSGL+KALKG+    +SE    D  S +SS    KS MS+E+W
Sbjct: 98  GRINFGLWQVQVKDILIQSGLYKALKGKPA-SLSEGKEPDKPS-DSSGDKGKSKMSEEEW 157

Query: 150 KEMNLRAASAIR------------------------------------------------ 209
           +E+++RAAS IR                                                
Sbjct: 158 EELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLYLKEKFHKLQM 217

Query: 210 -------------------TGKIEVKIDDENKTLILNLSLPLSYEHMKSILIYGNDTLNF 269
                                 I V+IDDE+K L L  SL  SYEHM+++L+YG + +NF
Sbjct: 218 EEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLSSSYEHMQTVLMYGKENVNF 277

Query: 270 VETTNKLLLEERSLKSEGRTSHEDSALVASNWKKKKDSEQKKACCWGCEQSRHMKKDCPN 289
            E T+KL+ EER LK+    S E  AL     +KK    +KK  CWGC Q  H+KKDC N
Sbjct: 278 SEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGHLKKDCKN 337

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022139673.17.8e-5656.73uncharacterized protein LOC111010521 [Momordica charantia][more]
KAE8709065.11.8e-3141.95hypothetical protein F3Y22_tig00110332pilonHSYRG00834 [Hibiscus syriacus][more]
KAE8717380.16.7e-3138.58hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus][more]
KAF3622233.13.3e-3039.35hypothetical protein FXO38_31400 [Capsicum annuum] >KAF3630407.1 hypothetical pr... [more]
XP_039060075.15.6e-3038.35G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Hibiscus syr... [more]
Match NameE-valueIdentityDescription
P109781.7e-0823.70Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A6J1CG823.8e-5656.73uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6A3B1418.5e-3241.95CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... [more]
A0A6A3BK593.2e-3138.58CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... [more]
A0A6A3CWI32.7e-3038.20CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... [more]
A0A6A2YS902.7e-3038.20Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..277
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 90..161
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 173..254
NoneNo IPR availablePANTHERPTHR34676:SF6SUBFAMILY NOT NAMEDcoord: 173..254
coord: 90..161
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 247..262
score: 8.581337

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g14710.1Moc11g14710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding