Moc11g11260 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTGTGAATTTTTTTTTTTTTTAAATGATGATTCTAAATTCCATGATATAATTAAAAGCACTTTTAAAATTTCCCACTAGATTTATAAATGAAAAAAAGTCAATGCATCAAGTGAAAAGTAATTCTAGTTCATTAAAATGAAGTATTTTTCCTTTTCAAAAAATTATCCCAAATTTCAATGCCCTTAAAATAATTTGTGAAAAAAAAAAAAGAAAAATTTCTTGAGGTGGGTTTTGTTTGATGTGTTTAAACTTTCTGAACTCAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTAATTAATAAATATTTACTAAAGTTTCAAACTTTAATCTGATTAGCAATTTTCTCGAGAAAAGAAACACTAATTTTCCGGGAAAATGGATGTTTTGTTTTGTGGGCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAATAA ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAATAA ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAATAA MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCEYTQLKKRGLCLVPLSMVVNYLAE Homology
BLAST of Moc11g11260 vs. NCBI nr
Match: XP_022139703.1 (uncharacterized protein LOC111010550 [Momordica charantia]) HSP 1 Score: 238.4 bits (607), Expect = 4.6e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Moc11g11260 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 175.3 bits (443), Expect = 4.8e-40 Identity = 114/190 (60.00%), Postives = 127/190 (66.84%), Query Frame = 0
BLAST of Moc11g11260 vs. NCBI nr
Match: XP_031739077.1 (vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical protein Csa_010736 [Cucumis sativus]) HSP 1 Score: 161.0 bits (406), Expect = 9.4e-36 Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 0
BLAST of Moc11g11260 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-35 Identity = 97/165 (58.79%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of Moc11g11260 vs. NCBI nr
Match: XP_022976591.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-35 Identity = 97/165 (58.79%), Postives = 116/165 (70.30%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09 Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07 Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04 Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy TrEMBL
Match: A0A6J1CGB1 (uncharacterized protein LOC111010550 OS=Momordica charantia OX=3673 GN=LOC111010550 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.2e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.9e-36 Identity = 97/165 (58.79%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy TrEMBL
Match: A0A6J1IHA8 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35 Identity = 97/165 (58.79%), Postives = 116/165 (70.30%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy TrEMBL
Match: A0A6J1J018 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 6.5e-35 Identity = 105/191 (54.97%), Postives = 128/191 (67.02%), Query Frame = 0
BLAST of Moc11g11260 vs. ExPASy TrEMBL
Match: A0A6J1FLD8 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 7.2e-34 Identity = 103/188 (54.79%), Postives = 122/188 (64.89%), Query Frame = 0
BLAST of Moc11g11260 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10 Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of Moc11g11260 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08 Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0
BLAST of Moc11g11260 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07 Identity = 47/131 (35.88%), Postives = 60/131 (45.80%), Query Frame = 0
BLAST of Moc11g11260 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 8.2e-06 Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|