Moc11g04760 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g04760
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein FAM33A
Locationchr11: 3104085 .. 3107940 (+)
RNA-Seq ExpressionMoc11g04760
SyntenyMoc11g04760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTTCATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGGCGAACTTGTTCACGAAGGCGAATCATGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTCCAGCAAATCTATCCCGACAGCGTAAGAGCACTAATTGGTTTGCGGAGGAATTTCTGTGTCCTGGAATGAATGTAGAATTATTTTTCAGTACTAGTACAAGATCTTTGAGCTTGTTGTAGATTTATTTCATTCTACGGGTACGGCGTAAGAGCAAGTAATCTATTTCTGACAGCGGTAGAGCAACATACTTTTGTCTATTTATTTATTTATTTTCTAATCGAGGCACTATTTTGTGTGAGGAGGAAATACTAGGTCTTGAAATGAATGTAGAATTATTTCATTCTCTCTTCGAGTGCTGGTACATGATCCTTGAGTTTGATATAGAATTATTTCATTCTACTGCGCAAGAGAAATAACGTATCTTAGAGCGGTAGAGCGACATGCGTTTATTTGTTCTTTCTTGGCTGTTAGTATTTCACTGTACTAGTCAGCAATTTGTTGTGGCTCTTGATTTTAGAAGGTTCGTTTTGCGGTATAAATATGTTTGTTCAGACAATGGACTACATGATTTTTAGGTTTATTTTTCCTGGTAACACGATCACCTGCTGTTTCTCTTAATTTTTGAAATTCTGAATTTCTGATTTTAGTGATCCTTCTGAATTTTGGAAAAAGCACCTGAAGAAAATTTGCTGTGTGTTCCACGACGAGATAACCACGGATTGATGTGGAACTCGATCTCATTTTTTCTTTCCAGATTTTCTTGGGGAAAAATAAATTCGAATCTTCTCCTGTTCAAGTGGTGTTTTTCATTTAAGTTTTTGTAACTTTTTGGCAGGCTAATCCGATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGACGATATATCAACCTTGCAAGAGCAGTGTCGTGAAATTTTGATGGCCAAACAGGTACATCGTGCTTTTACATTTTTCCAGAAAGGTATTGACTAGGGTAAACATACGTGTTTAAACTGCTAGAGTTCATGCTTTTCAAGAAATAGGTCTGAAACTTCATTTCACCTTGATTCGATTTGAAGAAATGTTGATATAGATATATTTAACTTGGAATGTTTGGTATGCATAAATGAGAATTTGAAGTTTGCGCACGTGACGTTTAAGAATAGAATGATTGTGTTTGGTGTATGTGAATGAGATTTATGAAATGCGATTTAGATTTTTCTTTGTCTATAATCTAAAATCTAATGATAACTTTTATGAGATGCAGTTATATTGATAATATTGTTTAAAATATTACTGCACACCAAATTTAAAATGTTATCTAATAAAAAACTGAATAATTGAAATCAAAGAAATTAAAATAAGTTGTCAATGCTTCATTGTAGTAGTATGGGTTTAAAACTTAAGTTAATGCCTTGATGGTCGATGGTTTTTTGCTCTTCGCTCGCTGATGGAGGACGAGGACTGCAAAAACATTGGTAATTGAAGAAACGATTCTAATGTACATTATTTATTCTTGTTCTAGAACTGAGCTTGAGCCATCTCAATACCTATTGCTAATTTATGCAACGATCATGTGCGGTTGTTGATAAAATTATCACTTCGTTTCATTAAGGAATTAGTTTTCTTTTCACTTTTCAAATGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCATACCCCTTGTCAGCGATCTCGATGATCATGCTTTTGCGCAATTCAAGAAGGTATTCCTTGCTAATGCCCCTTGGTTTTCATTTTGTGAGCAGTAGTAGTACTATGCATCGATTATTCCACGGCCCTAAGCCTGAATTGCGTTACCACGCATATGCAAAGGACTGTAGCATTTAGATTAGATTTGATGTCATTTTTTACACTCTGTGCTCTTTTTCCTCTTTATTCCACCATTAACTGTGAACGTTTAGGCTCTGTTTGATAACCATTTCGATATTGATTTCTGTTTTTAAAAATTAAGTTTAGAAATATAGGTGTTCCTTTGTTTTGTTTTATAGTTTTTCTGAAAATTTTTAAAATCAAGGCCAAGTTTTGAAATCCTAGAAAAAGTAATTTTTAAATGTTTGTTTTTGTTTTTTGAAATTTGGTAGAAATCAAATATGCTTTTAGAGAGATGTTCAAAAACATGTATAATCTTTTTAGAACAGGAAATTAAAACAAAACAGTTTAACGGCACATTAACACTAAGTATGTAGTGAATACATATTTTTCATATCATTCTCCACTTGCCAATCAGTCGCGAATGAAAGTGATGTAAGCGTGCGTTTTTGTATTCTTCTCGACCTACAAGAAAGATAAACAGAGTGAAGTAGGCACTTGACGTTTCTTGACCACTTTTAGCATTCGTTTTTCAAGTGCTCTCTCATCTACTTTATTTTTTGTTTTTTTTTCTTTCTAAAAGGTTGTAATTTCCAAGTGGTGCTTGTAGTTTTCGTACCATTTGCCAGCAAGCAACCAATATTAAATTTGCAAAAGGCTTTTACGAGTGAATATCCACACTAGATGGTATGTGGGTATCTTCGATCTTTTGGATAAAGCTTACACAACCAAATGGTAGTCAAGTGTTTACTAGTTAGTATCCATGTCTTCCTTTTTGACAAATAGGAAAGAAGAATACATAAAAGAAGATAATTTTTTCCTTTTTCAAAAAAATATAAAACATTCAAATTTTTTGTATTTGGTGGGTAGAAAGATAGGTGCTGATCACCAAGTGCATGAACATTTTCTTAAAATATCCTCCTCATTTGGTAGTGTCATGTGCACATGTGCACATGTGCAGAGTCATTCTTCTTATGTAGAATGTCTTGAACTGTGAAATTTTTAGCGGTGGTCCGTAGAAAGATAGATGTTGACCAATAAGTACTTAAATACTGTTTAATAATATATTTTTTTTTATTTAGTAGTGTCATGCCTTTAAACCATTTACTGAATTTCCGCCTGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGTAACGATTATTTTCAAGCTTTCTACAGAGATTGCTGACGTGGGTAAATTAATTTTGCTTGTTTGCAAAGGCGTGCATAGTTCGTTACTTTCTGTTTGTAAAATTAGTATTTACAATCAAAATTTAGAGCCGATTTCTACCTCAACTTTCCCAGTACACACAAGTCACAACCACTAGAATCGTAGATCACAAGTATGATCTAAGTTCTAATTTACGGTACATTATTCGAAAATATCACCCAACCCTGATACTGATAGTGAACCATTTTATTTACAAAAATATTAATAAAAGTATCGACCCTAAATTACAAGTATCTATCTAAAAATTAAGTTCATCAACGTCTCCATAACTCAATTGCATTTGCAACACGAAGCTAGAAAATTTCATTTCCATAATTTCTTTCTATTTGATTGTTTTTTTTCTAATAATAATTTGGGGACGTCTAGGGGATTTCGAAGATTTTGGCTTGTTGTTTTAGAGTCTTAGGATATGTTTGCCATTTTTTAAAATAACTTAATGGTAAGACATTACTATTTGATATGGAAGTAATTTGACAATAGAAAAAGAGTGATTTTGATCATTTCGAGATCTGAGAAAAATAATTTTGACTATGCCAATTACTCTCTAACATGCCTTTAGACTATTGTTTAGAGCCGTATGATTTATATATTTAACTGTTTTGTTTGGCGCCAAAACAGGGGACGACGGGCAGGAGGACGCCGACTCTAATGACGTAAATAAGTTGCTATTCTCGGCCGTAGTGCACACCAACCACTAA

mRNA sequence

ATGGGGCTTCATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGGCGAACTTGTTCACGAAGGCGAATCATGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTCCAGCAAATCTATCCCGACAGCGCTAATCCGATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGACGATATATCAACCTTGCAAGAGCAGTGTCGTGAAATTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCATACCCCTTGTCAGCGATCTCGATGATCATGCTTTTGCGCAATTCAAGAAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGACGACGGGCAGGAGGACGCCGACTCTAATGACGTAAATAAGTTGCTATTCTCGGCCGTAGTGCACACCAACCACTAA

Coding sequence (CDS)

ATGGGGCTTCATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGGCGAACTTGTTCACGAAGGCGAATCATGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTCCAGCAAATCTATCCCGACAGCGCTAATCCGATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGACGATATATCAACCTTGCAAGAGCAGTGTCGTGAAATTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCATACCCCTTGTCAGCGATCTCGATGATCATGCTTTTGCGCAATTCAAGAAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGACGACGGGCAGGAGGACGCCGACTCTAATGACGTAAATAAGTTGCTATTCTCGGCCGTAGTGCACACCAACCACTAA

Protein sequence

MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
Homology
[Close]
BLAST of Moc11g04760 vs. NCBI nr
Match: XP_022141272.1 (spindle and kinetochore-associated protein 2 [Momordica charantia])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH 159
           TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH 158

[Close]
BLAST of Moc11g04760 vs. NCBI nr
Match: XP_038898183.1 (spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1 spindle and kinetochore-associated protein 2 [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 138/154 (89.61%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           M L HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKIRD
Sbjct: 1   MVLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQK+QASMG+P VSDLDD AFA+FK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKLQASMGVPFVSDLDDPAFAEFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWT QVQSK G+DGQEDAD NDVNKLLFSAVV
Sbjct: 121 TEEWTRQVQSKFGEDGQEDADYNDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 272.3 bits (695), Expect = 2.6e-69
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKIG+DGQEDA+ +DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. NCBI nr
Match: XP_023534877.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 4.9e-68
Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           M L  LHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNML KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. ExPASy Swiss-Prot
Match: Q8WVK7 (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-06
Identity = 33/110 (30.00%), Postives = 56/110 (50.91%), Query Frame = 0 

Query: 14  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCR 73
           D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  I+    TL  + +
Sbjct: 6   DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFK 65

Query: 74  EILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSDLDDHAFAQFK 119
            + + +++   +    +    NM+QK+Q    + L  ++  +  A  QFK
Sbjct: 66  PVAVEQKESKSRICATVKKTMNMIQKLQKQTDLELSPLTKEEKTAAEQFK 115

[Close]
BLAST of Moc11g04760 vs. ExPASy Swiss-Prot
Match: Q4R8E8 (Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05
Identity = 31/110 (28.18%), Postives = 56/110 (50.91%), Query Frame = 0 

Query: 14  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCR 73
           D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  ++    TL  + +
Sbjct: 6   DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSALKSRYQTLYARFK 65

Query: 74  EILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPL--VSDLDDHAFAQFK 119
            + + +++   +    +    N++QK+Q    + L  ++  +  A  QFK
Sbjct: 66  PVAVEQKETKSRICATVNKTMNVIQKLQKQTDLELSPLTKEEKTAAEQFK 115

[Close]
BLAST of Moc11g04760 vs. ExPASy Swiss-Prot
Match: Q2TBY0 (Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-05
Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 0 

Query: 14  DGLANLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLQEQCR 73
           D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L+  +  I+    TL  + +
Sbjct: 6   DKLELMFQKADSDLDYIQYRLEYEIKTNYPDSAGKKNPVTLLKELSAIKSRYQTLHVRFK 65

Query: 74  EILMAKQDVIDKARTVLVGNRNM--LQKMQASMGIPLV 107
            I + +++   K+R     N+ M  +Q++Q    + L+
Sbjct: 66  PIAVEQKET--KSRICATFNKTMTLIQELQKETDMELL 101

[Close]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH 159
           TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVVHTNH 158

[Close]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match: A0A6J1IP41 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.3e-68
Identity = 135/154 (87.66%), Postives = 143/154 (92.86%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           M L  LHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCR++LMAKQDVIDKARTVLVGNRNML+KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV 154

[Close]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match: A0A6J1FBS9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0 

Query: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           TEEWTTQVQSKI  DGQEDA+S+DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVV 152

[Close]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match: A0A5A7VFB8 (Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001430 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 134/155 (86.45%), Postives = 145/155 (93.55%), Query Frame = 0 

Query: 1   MGL-HHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60
           MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKK 120
           DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQASMGIP VSDLDD A A+FK+
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 155
           ITEEWTTQVQSK G+D QEDAD ++VNKLLFSAVV
Sbjct: 121 ITEEWTTQVQSKFGEDAQEDADCSNVNKLLFSAVV 155

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BLAST of Moc11g04760 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43
Identity = 85/152 (55.92%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 7   HQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLQ 66
           + HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D++ L+
Sbjct: 4   NHHHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDVTLLK 63

Query: 67  EQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKITEEWTT 126
            QC ++L AKQD+IDKA+T LVGN N++QKM AS+G     D DD A A F +I +EWT 
Sbjct: 64  HQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIIDEWTM 123

Query: 127 QVQSK-IGDDGQEDADSNDVNKLLFSAVVHTN 158
           QV+S+ +G+   EDAD  D+NK+LFSA+ HTN
Sbjct: 124 QVRSRTVGE--TEDADKEDINKMLFSAICHTN 152

The following BLAST results are available for this feature:
BLAST of Moc11g04760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141272.12.7e-82100.00spindle and kinetochore-associated protein 2 [Momordica charantia][more]
XP_038898183.11.8e-7089.61spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1... [more]
XP_022935897.12.6e-6988.96spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata][more]
KAG6591515.19.8e-6988.31hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023534877.14.9e-6888.31spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. p... [more]
BLAST of Moc11g04760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8WVK79.4e-0630.00Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=... [more]
Q4R8E82.7e-0528.18Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=S... [more]
Q2TBY04.7e-0532.65Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 ... [more]
BLAST of Moc11g04760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CJF11.3e-82100.00Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1[more]
A0A6J1F6V91.3e-6988.96Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1[more]
A0A6J1IP415.3e-6887.66Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1[more]
A0A6J1FBS92.6e-6788.31Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1[more]
A0A5A7VFB84.5e-6786.45Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00143... [more]
BLAST of Moc11g04760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24970.11.2e-4355.92unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.1380coord: 10..124
e-value: 2.9E-27
score: 96.9
IPR042091Ska2, N-terminalPFAMPF16740SKA2coord: 10..118
e-value: 2.6E-42
score: 143.1
IPR026762Spindle and kinetochore-associated protein 2PANTHERPTHR32017SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2coord: 12..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g04760.1Moc11g04760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0007059 chromosome segregation
biological_process GO:0000278 mitotic cell cycle
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000940 outer kinetochore
cellular_component GO:0005876 spindle microtubule
molecular_function GO:0008017 microtubule binding