Moc10g15870 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g15870
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr10: 12037541 .. 12046924 (-)
RNA-Seq Expression	Moc10g15870
Synteny	Moc10g15870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACACCCTGCTGTTTCCACTGGTTCGAGCCATCCAAGTCGTCGTAACAATAATGGAGACCCCGACCTCCAACACGAGGTGAATTCAAAGAATGTTGAGGACCAACTGCATGGAGATTGAGTGGGCGATCCCCCCCGCAGGTCGACCCGCAATGCTCAAAAACCACTTCCTCCTACTCATCAACGCGACTACCCGCCGAGCACGAGGAGCATCCAAAAAGACTACCCAGAAGTCTTCTCGTTAGGTAGATTCTGATGTTCTGGCCGTATTTCAGCTCGAGTTGGATAGTATGCAAACAAAAGTCTAGACGATGGAGGAGTCCTACAAAAACCTCCTACAAGCTAACCGAACTGATTCTCATTCTGGGAACTAGAAGGAGGACCAGGAACGATCCTTGCAGGCCAATGCCCATGATGATAATCAACACTCGGTTAATAATAATGGCCGCGTCATGATGGAGCTGATTACAGTTACTAGGAGGGCGACCTGCGAAAGTATCTTGCAGACAAAAAGGGGAATAACTCCGCGTTTGGGGGCGTGGACGTCTCCCCAAGCTGCTGGCAAAAAATTCCAAACAACAAAGCTCAATCTCAATTCACTCTGGTCGCGCTTCAGGGAGTGATTACAAGGGAAGAGTTTGACCTGATGAAGAGTAAGTTTGATGCCCAGGTCGAGGCTCTACAGAAGAAGTGCAAAAAAAGGGATAGTTTGTTTGATGATGGTGAGCCGGGCGAATCACCATTCACCTTGGACATTCTTGAGGCGTCGATTCCAACAAAGTTCAAAACACCCAGCATGAAGCCTTATGATGGGTCTAAGGACCCAAAAGACGATGTTGATGTCTTTGTGGGTTTCATGGACTTTCAGGTCGCAACCAATGCGATAAAATGTCAAACGTTCCAAATTCCCTTAATAGGGAGTGCCCGACCTGGTACAAAAGGTTGCCCTCAAAGTCGATCTCCACCTAGGAGCCAGCAGAGAAGAGAGTTCATCAACCAGTTCTCTACTTAGTACTATGACAAGAAGACAACAACTCATATCGCCACCATTCTTCAAAAGGAAGTCGAAACACTGCAAGAATATGTAACCATGACAAGAAGACAACAACTCATCTCGTCACCATTTGTCAAAAGGAAGTTGAAACACTGCGAGAATATGTAACCAGGTCCTAAGAGGAACAGCTCAAGGTCACTCACTGCTCGGACGACTCTACTATGTGCTACTTCCTCAGTAGTTTAACAGATGAAGCGTTAACTGTTAAACTCATAGTTTACTTTTATGTAAAAACAAATTTATATTCAAGAAAATTATATTAAATCAATTTGTTGTTGAATTCATGACATTGCAATTATCTAATCCAATAAATTAAACATCCAAGGTTATTGTCATGTAACTGGGACAGTATATATACTGGGTATATATTTGATATACTTTTGATATACAAGTGGATAATGTCTCAAGAATAACCTAAAGGGTCTATGGTATATGGATAAAGCTGGGTACCTTATCTTGGCAACACTATGGATACGACCCACTTTGTAAATGTTACAAACAACCCGTTCCAGGTCGTTCATGTGGAGACATGCGAGTAGGGGTATCTTATACAATGAGTTTGTATAAGACCGGACCACGAATAGCCAATCTTTAGATGTAATGCTGTTGACTAATAGATTGCTATTTTATAGCACTAGGCAACTCATTCTCAATCCTGAGTGAGTTATGAACTTCTGCCCGTGAGGGCTCGTTCTTTGACCTATATGGGTGAGAGTGGCTCTAGTCGCCGACTCAATATTCACAACATTTTGGGGGACAAGATCGAGTGGAGAGCTGGAAACATAACTACACAAGATGTAATTCACTCCTACCCGACTTTAGGGGAGTAGATGATTGTTCCATTTAGTGCTGAATCCGAGACTTGAACAAGGGGCCTCATCTTTTTACTGGCCCAAGAGGGCCTTCCGGTTATTGGTCGGACCATAACAGGGTTGTTCATTAGAGGATTAGCGGTATTTAACGTACAAGATATAACACAGGGGTAAAATAATAATTGGACCCATCTGTGGTTACGAACACTCGTGAAGGATTGACTTGCCATTAATTGTCGATATCCATAGACACATAAATATTCTATAGTGAGAAGAGTGCTGCTGCGGGTTTTTAGTGGAGTAGCCCGTAGTTAATGTATGTTGATTAAGGTGGTTAATGAGTTTAACCAATTAATTTCGTAAAGTTGGAGCTTCTGATCTATAGGTCCATTAGGTCCCCTTGGTAGATTGTAAATGGTAATTAAGAACATTAATTCTAGGAAGAAATTCGAATTGTTCAAATTTAATTAAAAGGAAATTTGAGTTAATTGCGTATGACACAATTTAATATAATGTATGATGATACATTTTAAAAATATATATTATGAGATAATAATGTGAATATGATTCATATTAAAACTATAGGTTAAAGTTTAATGTAAATTAGATTCATATTAAATACTATAGGTTATGAGGTAAATGTATATTTGAATATGATTCAAATATTTATTGATTTAATTAAATTATATTTAATTGCCAAAGTGAGCATAGCTCAGTGGTAATTGGCATATAAGAAAGGATCCCACAATCCGTTATTGATTCTAGAGTTTTAGCAAGGTTGCTAAGTGGCAGTGTCCAACTTTTGGGTTCGTACATTTGGGTTCGTTTGTTCGCACGGAAACAAATTTTGTGCTCGAGGAAGAAGGGTTGCTAACGGTCTTCAAATGTAAGTCGTTTCTTCCTCCCAAGAGGCTTAACCTCGTTATTAATAGAAATGTTCTGTTTTTTTTTTAAAACCGGTATTGTTCCGTTTCTAATCTGAGTTGAATCACAAGCAATCAACCGCTTCCGTTGAGGATTCGATCACTTCAATTGGTATCAGAGCCAAATGTGATTCACTTTCGATTAGGACAAAAAGATATTGGTTTTTGGTGGGTTATTTTGATGCATTTGATGTATGTTGGTTTGCTAGTGGATGGTTTCAGTTTTTGGCATTTAGATTTACAATTATTGTTGATTCGATCAACGTAAGGGCCCGCTGTTTTGGGCATTTTGTTGTAATCGAGTTTGTACAGTCCGGGTCATTTGTAGAAAAGAGTTGTTGCAAAGAAAGGCCGATTTTCGATAATTTTAGAGGTTTTCGGTGCTGGAACAGAGAGTATAGCAGCAGACCCGTGACAGCAGCGCCGTGGTGCCATTTTACAACACCGTGGCGTTGCAGCAAATTTCCAGCAAGTGTTGCGGCGCCGTGGCGCTGCAGCTGCTGGATTTTGCTGCAGCAGCGCCGCGACGCTGTCCCTGGTGTTTTTTCAACCTCCGGTTCGTGTGTTCGAGGCTCCGCAGGTGTTTTTCTGTGTTGTTTTAAATTGACATAAATTAGTTTATATAAATTTAATTGTAACATAAGATGCCAAAAACCGGTCTACTTAGCTATTTAATTTACTGCATTATGAATGTAATTATATTATGAATTATATGCTGCATAAAGTATGCCATATAGTGTTAAAATCCCACCATAGCTTAAGTATGATCATGCATCATATGTATATAATAGTTATAATATATGATAACATGTTTTACTTTCATAATTGATTCATATAAATGTTGTATTAATTAGATGAAAATTAAATTGCATCGAACATGACATTTCTTTAGATAATATAATTGTTATATTAATGTATGTTGTCAATGCATGATTATAGGTTTAATTTCTTGAATTTGATAAGAGTTATAAAATTTTGGTAGATAGAAATTAAAATCTATAATAAAAAATTGCATGCAAACATAGGGTCTAAGTTAATTAATTTTAAAGGGGTTTAAAATTAATTAGACCTTAGGTTATATCTTCTAATATGATTAGGAGATGATCTTTTATTTTGTTTTAACTAGGTTTAAAATGAAATAATAAAAGACTAAATATAAAATATATTGCCTATAAGGGAACCATGTCTAAGGAAGGTTCTGTCTAGGTTGAGGTATTTAAACTGACCATAAGGGAACACCTCTACCTGAGAACCGACCTAGGGGTTGAATTTGTCGATATTTTATATGCATGCAATAATGTCATTAGTTTATTAAAACGTTTGATAAACTAAAACATTAATGTACAACATCAAATATAAGTAGTTATATTGTGCTGACTAAACATTCACTTAGTTAATTTCACTTAGTCAGGATTTACCTAAGTAATATATCATAGTCTTAGAATACTAAGTGGGAGTAAAAGAGAATGTGTAATATACCACGTATATTTTTGATATACGAGGTATATATGACATATTTCCTTTTCCCTCACGTTTCTCCTTAATGTTCACACTTTGAGTTCTATGCTCAGCCTCCTGTCGCCCTAGGTGCGGTCTCCCTACGGAAGGTGTTTGCATGGTTCAATATCGAGGTGAATGGAGATAGTATTCATACTAACTGGGAGAAAGACATGTGACGACACATCCTACGGTCTCTACCATTAGTTTGTACCATGAGATTTCATACATGACCTGCGTATCGTCATGGAGCAATCATTCCTATGGAGGGTCCATTGTATGGAATCGAAATCAAGGCAAACTCCAAAAATGGATAAGGGTTTCTTAGGTTTTGATCCAATATTTTCATTCCTTACGACGAGATTATTGGAACGGACCTCTGAGGTCTGAAAATGGTGGGTCACTCTTACGGGGAGTTGTTAAGCTAGTTAGCAAGTTCCTGACCAAATAAACGGTGACTAAAGATTAAAGGAATAATAGTTATTATAGTGAGATTTAGTTGAGACGTCTCAATTCAATGAAGGGGTAGATGTCTGCCCTATGGTGGCTGTTGCTCTAAATCACTGAAACATGAAGGCCTTAAGTTCATTTACAACTCTCGCATGAAGGAGGGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTTGATCGGGGCCGTCATAGACGAGCAGAGGCATGTCAGCTTCATTCTGGAATCTCTTTCGAAGAGTTTCCTGTCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCTTAAATGAGCTGCAAACCTACCAGTCTCTTATGAAAAGTAAGGGACAAGAGGGGGAGTCAAATGTTGCCACCTAAAATAGGTTCAACCGAGGTTCGTCTTCTGGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGGCTATTAGTAAGGGGTCTAAACATGACTCCGTTGTTGCCGCTGCCAAGAAAGGCAAGACCAAGGTTGCAAAGAAAGAAAAGTGTTTCTACTGCAATATGGACGGGCATTGGAAGCGCAACTGCCCAAAATACTTGGCTGAAAATAAGAAAGCCAACGAAGGTAAATATGATTTACTAGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCTGCCTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCGTGGAGGCAGCTTGACGCCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTAGGGGAGCTCAAGTTGTTTACGAACAAGAATATGTATATATTATTAGGTAATGTGTATGTAGTTCCTAAAAATAAAATGAACTTAATTTCAGTTTCTTGTTTGTTAGAACATTTATATTCCATTTCATTTAATTTGAATGAAGCGTTCATTTCAAGAAATGGTGTTAATATTTATTATGCTTTGCTTGAAAACACTTGTATGTGCTAAGACCAACCATAACTAAAGCAGTTTTAAATACCGAGTTGTTTAAAAATGCTAGAACTCAAAATAAAAGGCAAAAAATTTCTCACAAAGAAAATACCTTTTTTTGGCACTTAAGATTAGGTCACATTAATCACAATAGGATTGGGAGGTTGGTTGAGAATGACATTCTAAGTGGGTTAGAAGACGATTCTTTACCACCATTTGAGTCTTGTCTTGAAGCAAGATGACTAAAAGACCTTTTACTAGAAAAGGTTATAAAGCCAAAGAGCCCTTGGAACTTATACATTCAGACCTTTGTGGTCCGATGAATGTTAAAGCTCGAGGAGGGTATGAATACTTCATCTCTTTTATAGATGATTATTCAAGGTATGGTTATTTATACCTAATGCAATATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAGTACAAGACAAAAGTTGAAAATCAATTAGGTAAAACCATTAAAACACTTCGATCTGATCGGGGTGGAGAGTATATGGACTTGAGATTCCAGGATTATATGATAGAACATGGAATCACGTCCCAACTCTCAGCCCTTGGTACACCTCAACAAAACGGTGTATCAGAAAGGAGAAACAGAACCCTAATGGACATAGTTCGATCAATGATGAGCTATGCTCAGTTGCGTAACTCATTTTGAGGTTTCGCGGTGGAGACTGCGGTTTATATTTTGAAGATAGTTCCATCAAAGAGTGTTTCTGAAACACCCTTTAAGCTATGGAAGGGTCGTAAAGTTAGTTTACGTTATTTTCGCATTTGGGGATGCCCGGGACATGTGCTCTTGACTAACCCAAAGAAACTACAGCCTCGTTCAAAAGTATGCCTATTCGTAGGTTACCCTAAAGAGACAAGAGGTGGTCTACTCTTCGATCCTCAAGAAAACAGAGTTTTTGTATCGACAAATGCCACTTTCAAGGAAGAAGACCACGTTCCAGATGATAAACCACAGAGTAAGGTAGTGATTAACGAGATTTCCGAAGAGGCTACAAACACGTCGACAAGAGTTGTTGATGAAGCCAGTACATCACGTCAGTCACATCCACCTCAAGTATTGAGGGTGCCTCAACGTAGTGGGAGGATTGTGTCACAACCTTACCGCTACGTATGTTTAACAGAAACCCAAGTTGTCATACTTGATGATGGCGACGAGGATCCATTGACCTACAAAAAGGCAATGGAAGATACTGACAAGGACAAATGGGTCAAAGCAATGGACCTGGAAATGGAGTCGATGTACTTTAATTCCGTTTGGGAACTTGTAGATCAACCTGACGGGGTAAAACCCATAGGGTGCAAATGGATCTATAAGCGAAAACGAGACGCTGAAGGAAAGGTACAGACCTATAAGGCGAGACTTGTGGCAAAAGGCTACACACAAAGGGAAGGGGTGGACTATGAAGAAACCTTCTGCCCTGTAGCTATGCTTAAGTCCATTAGAATACTTTTGTCCATTGCCACATATTATGACTATGAGATATGGCAAATGGAAGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAAATTATTTATATGTCTCAACTCGAAGGGTTTATAACACAAGGTCAAGAGCAAAAGGTTTGCAAGCTTAAACGGTCAATATATGGATTGAAACAAGCATCTCGATCTGGGAACATAAGGTTTGATACTGCGATCAAATCTTATGGTTTTGACCAAAATGTTGATGAGCCTTGTGTATACAAGAAGATCATCAACAACATTGTAGCCTTCTTAGTGTTGTATGTGGATGATATCGTACTCATTGGGAATGATGTAGGATACCTCACTGACATAAAGAAGTGGCTAGCGACTGAGTTCCAAATGAAGGATTTGGGAGAAGCTCCGTATGTTCTTGGCATCCAAATTCTACGGGATCGCAAGAACAAAACGTTAGTCCTGTCTCAAGCAACTTATATCGACATATGCTTGTTCGATGTTCGATGCAGAATTCCAAGAAAGGCTTATTACCCTTCAGGCATGGAATTCATCTGTCTAAGAAACAATGTCCTGAGACACCTCAAGGAGTTGAGGATATGAGACGTATACCCTATGCTTCAACAGTGAGCAGCCTGATGTACGCTATGTTGTGCACTAGGCCTGACATTTGCTATGCAGTAGGGATGGTCAGTAGGTGCCAATCCAACCCAGGATATGATCACTGGACTGCTGTTAAGGGAATCCTCAAGTATCTAAGGAGAACGAGGGACTACAAGCTCGTGTATGGCTCTAAGGATTTGATCCTTACAGGATACATTGATTCTGACTTCCAAACAGTCAAGGATTCAAGGAAATCCACGTCGGGGTATTCACTCTTAATGGAGGAGCGGTAGTTTGGCGAAGCATCAAACAAGGATGCATCGCAGACTCCACCATGGAGGCTGAGTATGTTGCAGCTTGTGAAGCAGCAAAAGAGGCGTTTTGGCTTAGAAAGTTCTTGACAGATTTGGAAGTCGTTCCAAACATGAACTTGCCCATCACACTTTATTGTGATAACAGTGGTGCTGTGGCAAATTCTAAAGAACCTCGAAGCCACAAGAGAGGCAAACACATCGAAAGGAAGTACCATCTTATACGGGAGATAGTGCAACGGGGAGATGTGATCGTCACAAAGATCGCTTCAGAGCACAACATTGCTGATCTTTTTATGAAGGCACTCACGGCTAAAGTGTTTGAGGGCCATTTAGAAAGTCTAGGTCTACGAGCATTGTACAGTTAGTTTAGGGCAAGTGGAAGAAATGTAATGGGTATAGTGTATGCCCAAGTTTATTGTATTTTCCCTTTGCTGTATGATAATGTACATCCCGCTCGAGTCTAGTTCAAGTGGGAGTTTGTTGGGTGTGTTGCCCTAAACTCGTAGTTTGTAATTATGTAAAAACCAAATGTGTATTCAATAAAGTTTTATTCAATAAATTTTTTGTTGAATTCATAGCATTGCATTGTCCAAAATCCAATAAACTAAACATCCAAGGTTATTATCATGTAACCGAGATAATATATATACTGGGTATATATTTGATATACTAGGTATATATTTGATATACCCCTGATATACGAGGTATATATTTGATATACCCCTGATATACGAGTGGATAATGTCCCGTGAATAACCTAAAGGGTCTATAGTATATGGATAAGGTTGGGTACCTTATCCTGACAACACAATGGATATGGCCTACTTTGTAAATGTTACAGACGACTCGATCCAGGTTGTTCGTGTGGAGACATGCGAGTGAGGGTATCCTATACAATGAGTTTGTATAAGATCGGACTGCAAAATAGACAATCTTTAGATGTAACGCCGTTGACTAATAGATTGCTATTTCATAGGATGACCAAACAACTCATTCTCAATCCTGAGTGAGTTATGGACTCCTGCCCTTGAGGGCTCGTCCTTTGATCTGTATGGGTGAGAGTGGCCCAAGATGCCGACTCAATATTCCTACCATTTTGGGGACGAGACCAAGTGGGGAGCTGGGAACATAACTTCACAAGACGGAATTCACTCCTCCCCGACTTTAGGGGAGTCGGGACTTGAACAAGGGGCCCTACCCTCACACGATAACTTCACACGATAG

mRNA sequence

ATGGTACACCCTGCTGTTTCCACTGGTTCGAGCCATCCAAGTCGTCGTAACAATAATGGAGACCCCGACCTCCAACACGAGGAGGGCGACCTGCGAAAGTATCTTGCAGACAAAAAGGGGAATAACTCCGCGTTTGGGGGCGTGGACGTCTCCCCAAGCTGCTGGCAAAAAATTCCAAACAACAAAGCTCAATCTCAATTCACTCTGGTCGCGCTTCAGGGAGTGATTACAAGGGAAGAGTTTGACCTGATGAAGAGTAAGTTTGATGCCCAGGTCGAGGCTCTACAGAAGAAGTGCAAAAAAAGGGATAGTTTGTTTGATGATGGTGAGCCGGGCGAATCACCATTCACCTTGGACATTCTTGAGGCGTCGATTCCAACAAAGTTCAAAACACCCAGCATGAAGCCTTATGATGGGTCTAAGGACCCAAAAGACGATGTTGATGTCTTTGTGGGTTTCATGGACTTTCAGCAATCAACCGCTTCCGTTGAGGATTCGATCACTTCAATTGGTATCAGAGCCAAATGTGATTCACTTTCGATTAGGACAAAAAGATATTGGTTTTTGGTGGGTTATTTTGATGCATTTGATGTATGTTGGTTTGCTAGTGGATGGTTTCAGTTTTTGGCATTTAGATTTACAATTATTGTTGATTCGATCAACGTAAGGGCCCGCTGTTTTGGGCATTTTGTTGTAATCGAGTTTGTACAGTCCGGGTCATTTGTAGAAAAGAGTTGTTGCAAAGAAAGGCCGATTTTCGATAATTTTAGAGGTTTTCGGTGCTGGAACAGAGAGTATAGCAGCAGACCCGTGACAGCAGCGCCGTGGTGCCATTTTACAACACCGTGGCGTTGCAGCAAATTTCCAGCAAGTGTTGCGGCGCCGTGGCGCTGCAGCTGCTGGATTTTGCTGCAGCAGCGCCGCGACGCTGTCCCTGGTGTTTTTTCAACCTCCGGTTCGTGTGTTCGAGGCTCCGCAGGCCTTAAGTTCATTTACAACTCTCGCATGAAGGAGGGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTTGATCGGGGCCGTCATAGACGAGCAGAGGCATGTCAGCTTCATTCTGGAATCTCTTTCGAAGAGTTTCCTGTCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTTCAACCGAGGTTCGTCTTCTGGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGGCTATTAGTAAGGGGTCTAAACATGACTCCGTTGTTGCCGCTGCCAAGAAAGGCAAGACCAAGGTTGCAAAGAAAGAAAAGTGTTTCTACTGCAATATGGACGGGCATTGGAAGCGCAACTGCCCAAAATACTTGGCTGAAAATAAGAAAGCCAACGAAGGTAAATATGATTTACTAGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCTGCCTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCGTGGAGGCAGCTTGACGCCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGAAGAAGACCACGTTCCAGATGATAAACCACAGAGTAAGGTAGTGATTAACGAGATTTCCGAAGAGGCTACAAACACGTCGACAAGAGTTGTTGATGAAGCCAGTACATCACGTCAGTCACATCCACCTCAAGTATTGAGGGTGCCTCAACGTAGTGGGAGGATTGTGTCACAACCTTACCGCTACATGCCGACTCAATATTCCTACCATTTTGGGGACGAGACCAAGTGGGGAGCTGGGAACATAACTTCACAAGACGGAATTCACTCCTCCCCGACTTTAGGGGAGTCGGGACTTGAACAAGGGGCCCTACCCTCACACGATAACTTCACACGATAG

Coding sequence (CDS)

ATGGTACACCCTGCTGTTTCCACTGGTTCGAGCCATCCAAGTCGTCGTAACAATAATGGAGACCCCGACCTCCAACACGAGGAGGGCGACCTGCGAAAGTATCTTGCAGACAAAAAGGGGAATAACTCCGCGTTTGGGGGCGTGGACGTCTCCCCAAGCTGCTGGCAAAAAATTCCAAACAACAAAGCTCAATCTCAATTCACTCTGGTCGCGCTTCAGGGAGTGATTACAAGGGAAGAGTTTGACCTGATGAAGAGTAAGTTTGATGCCCAGGTCGAGGCTCTACAGAAGAAGTGCAAAAAAAGGGATAGTTTGTTTGATGATGGTGAGCCGGGCGAATCACCATTCACCTTGGACATTCTTGAGGCGTCGATTCCAACAAAGTTCAAAACACCCAGCATGAAGCCTTATGATGGGTCTAAGGACCCAAAAGACGATGTTGATGTCTTTGTGGGTTTCATGGACTTTCAGCAATCAACCGCTTCCGTTGAGGATTCGATCACTTCAATTGGTATCAGAGCCAAATGTGATTCACTTTCGATTAGGACAAAAAGATATTGGTTTTTGGTGGGTTATTTTGATGCATTTGATGTATGTTGGTTTGCTAGTGGATGGTTTCAGTTTTTGGCATTTAGATTTACAATTATTGTTGATTCGATCAACGTAAGGGCCCGCTGTTTTGGGCATTTTGTTGTAATCGAGTTTGTACAGTCCGGGTCATTTGTAGAAAAGAGTTGTTGCAAAGAAAGGCCGATTTTCGATAATTTTAGAGGTTTTCGGTGCTGGAACAGAGAGTATAGCAGCAGACCCGTGACAGCAGCGCCGTGGTGCCATTTTACAACACCGTGGCGTTGCAGCAAATTTCCAGCAAGTGTTGCGGCGCCGTGGCGCTGCAGCTGCTGGATTTTGCTGCAGCAGCGCCGCGACGCTGTCCCTGGTGTTTTTTCAACCTCCGGTTCGTGTGTTCGAGGCTCCGCAGGCCTTAAGTTCATTTACAACTCTCGCATGAAGGAGGGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTTGATCGGGGCCGTCATAGACGAGCAGAGGCATGTCAGCTTCATTCTGGAATCTCTTTCGAAGAGTTTCCTGTCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTTCAACCGAGGTTCGTCTTCTGGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGGCTATTAGTAAGGGGTCTAAACATGACTCCGTTGTTGCCGCTGCCAAGAAAGGCAAGACCAAGGTTGCAAAGAAAGAAAAGTGTTTCTACTGCAATATGGACGGGCATTGGAAGCGCAACTGCCCAAAATACTTGGCTGAAAATAAGAAAGCCAACGAAGGTAAATATGATTTACTAGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCTGCCTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCGTGGAGGCAGCTTGACGCCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGAAGAAGACCACGTTCCAGATGATAAACCACAGAGTAAGGTAGTGATTAACGAGATTTCCGAAGAGGCTACAAACACGTCGACAAGAGTTGTTGATGAAGCCAGTACATCACGTCAGTCACATCCACCTCAAGTATTGAGGGTGCCTCAACGTAGTGGGAGGATTGTGTCACAACCTTACCGCTACATGCCGACTCAATATTCCTACCATTTTGGGGACGAGACCAAGTGGGGAGCTGGGAACATAACTTCACAAGACGGAATTCACTCCTCCCCGACTTTAGGGGAGTCGGGACTTGAACAAGGGGCCCTACCCTCACACGATAACTTCACACGATAG

Protein sequence

MVHPAVSTGSSHPSRRNNNGDPDLQHEEGDLRKYLADKKGNNSAFGGVDVSPSCWQKIPNNKAQSQFTLVALQGVITREEFDLMKSKFDAQVEALQKKCKKRDSLFDDGEPGESPFTLDILEASIPTKFKTPSMKPYDGSKDPKDDVDVFVGFMDFQQSTASVEDSITSIGIRAKCDSLSIRTKRYWFLVGYFDAFDVCWFASGWFQFLAFRFTIIVDSINVRARCFGHFVVIEFVQSGSFVEKSCCKERPIFDNFRGFRCWNREYSSRPVTAAPWCHFTTPWRCSKFPASVAAPWRCSCWILLQQRRDAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRHVSFILESLSKSFLSFRSNAVMNKLEFNRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHWKRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAEEDHVPDDKPQSKVVINEISEEATNTSTRVVDEASTSRQSHPPQVLRVPQRSGRIVSQPYRYMPTQYSYHFGDETKWGAGNITSQDGIHSSPTLGESGLEQGALPSHDNFTR

Homology

[Close]

BLAST of Moc10g15870 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 95  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 154

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 155 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 214

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 215 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 274

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 275 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 334

[Close]

BLAST of Moc10g15870 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 213 DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 272

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 273 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 332

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 333 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 392

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 393 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 452

[Close]

BLAST of Moc10g15870 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

[Close]

BLAST of Moc10g15870 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-02
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 589  SQPYRYMPTQYSYHFGDETKWGAGNITSQDGIHS 623
            ++P    PTQY+YHFGD + WGAGN  +Q+GIHS
Sbjct: 1319 TKPLTAKPTQYAYHFGDSSDWGAGNAATQEGIHS 1352

HSP 2 Score: 283.9 bits (725), Expect = 1.7e-72
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 0


Query: 309 DAVPGVFSTSGSCVRGSAGLKFIYNSRMKEGSSVREHVLNLMVHFNVAELIGAVIDEQRH 368
           D++  +F  +   ++  A LK+IYN+RM EG+SVREHVLN+MVHFNVAE+ GAVIDE   
Sbjct: 96  DSLQEMFGQASYQIKHDA-LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQ 155

Query: 369 VSFILESLSKSFLSFRSNAVMNKL----------------------------------EF 428
           VSFILESL +SFL FRSNAVMNK+                                  +F
Sbjct: 156 VSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKF 215

Query: 429 NRGSSSGTKSAPSSSGSKTFKKKAISKGSKHDSVVAAAKKGKTKVAKKEKCFYCNMDGHW 488
           +RGS+SGTKS PSSSG+K +KKK   +G+K +  +AAAK  K   A K  CF+CN +GHW
Sbjct: 216 HRGSTSGTKSMPSSSGNKKWKKKKGGQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHW 275

Query: 489 KRNCPKYLAENKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLD 533
           KRNCPKYLAE KKA +GKYDLLVLETCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+
Sbjct: 276 KRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLE 335

The following BLAST results are available for this feature:

BLAST of Moc10g15870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048404.1	3.5e-72	60.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	3.5e-72	60.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	3.5e-72	60.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	3.5e-72	60.47	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0047792.1	3.5e-72	60.47	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc10g15870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc10g15870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	1.7e-72	60.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	1.7e-72	60.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7V4M1	1.7e-72	60.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7TWB9	1.7e-72	60.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5A7TWB9	1.9e-02	58.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

Pages

BLAST of Moc10g15870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 444..460 e-value: 0.0055 score: 25.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 444..460 score: 9.372511
None	No IPR available	GENE3D	4.10.60.10		coord: 418..473 e-value: 1.1E-7 score: 33.6
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 331..389 e-value: 3.9E-7 score: 29.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 555..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..629
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..644
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 435..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g15870.1	Moc10g15870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding