Moc10g12800 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g12800
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr10: 9727828 .. 9737760 (+)
RNA-Seq Expression	Moc10g12800
Synteny	Moc10g12800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATCCGGGCAACAAGCGGAGTCTGCTTCTAGTTATACTAGATATCCTGTATGCAAGAATTGTGGTAAGTCGCACAGGGGTGAATGCCTCTAGAGGGCGAGCATTGTTTGTTATAACTGCGGGCAAGTAGGTCATATGAAAAGAGAATGTCCTTAGTTGTGGCAGGAAGGTAGTGCGTCCCAAGGAGCTTCCTCAAGACCGACGGTACAGGGACATTCAGATTCACAAGCAAAACCCGTGAGTGAGGGGCAACCAAGTACAGGAAATTCTAGTGGCGTTAAGTCGAAGGGTCAGGTAGGCAGACCACGTGGTCAGGGAAAGATATTTGCAATGACGCAGCATGAGGCTGAAGAACTGCCAAATGTAGTTACAGGTACGCTGAATATCTTCGATAAAAATGCTCATGTTTTATTCGATCCGGGTGCTACACATGCATTTATTTCTATCATGTTCTCTGTTGGGTTAGATAAAAAGTTAGAACCCTTACCTAGTGAATTGGTAATAGCTACACCGGGTGGTATATCTTTGATAGCAGACGGTGTGTATCGTGATTGCATAATTGATTTGGGTGATAGGCAGTTTAATGTGGATTTAGTCCCATTGAATATTCGTGAGTTTGATGTTATTTTGGGAATGGATTTCCTGTTCACACATCATGCATCGATTGACTGTTATCAGAAAGAGGTTATATTTAAACGGCCAGGGGAGGCTGAGATTATCTATAGAGGTGAAAGAAAAATTCGTCCCAGCATGTGTAATATCTGCAATGAAGGCTAGTAAATTGTTGAATAAATGGTGTACAGCATACTTAGCGTATGTTGTTGATCAGCGGATTGAAAAAGGGAAGCTTGAAGATATACCAGTTGTGCGAGAATTTCCAGACGTATTTCCAGATGATTTATCTGGGTTGCCACCTGATCGGGAGGTTGAGTTTGTGATTCATTTAATACCAGGCACTGCTCTGATATCTCAAGCACCATACAGAATGGCTCCTACAGAATTAAAAGAATTGAAGACACAGTTGTAGGAATTAGTTGACAAAGGTTACATTAGACCTAGTGTGTCACCGTGGGGTGCGCCAGTATTATTTGTGAAAAAGAAAGACGGTACTCTGAGGTTGTGTGTTGATTATAGACAACTGAATAAGGTAACGATACTAAACAGATATCCATTTCCTCGAATAGATGATTTGTTTGATCAGCTTAAAGGTACTGCAGTGTTCTCAAAAATTGATTTGTGATCCGGATATCATCAGTTAAAGGTAAGAGAAGCAGATGTGCCAAAAACTACATTTAGAACACGATATGGGCATTACGAGTTCCTAGTTATACCTTTCGGGTTGACTAACGCACCAGCATCATTTATGGATTTTATGAATAGAGTATTTCATCTGTACCTAGACCGATTTGTAATTGTGTTCATTGATGATATACTAGTGTTTTCCGGCAGCCAGAGCGAGCATGTAGAGCATCTTAGAACTGTGCTACAGACGTTACGTGATAGGAAGTTGTATGTAAAATTTAGCAAAAGTGAATTTTGGCTTGATCATGTGATGTTTTTGGGCCATGTTGTCTCTGCAGAAGGTATTTATGTTGATCCACAGAAAATTGAAGCAGTTGTGAAATGGGAACAGCCTACTACTGTTACAGAGGTTCGTAGTTTCCTCGGTTTGGCAGGATATTATCGTCGATTTGTTGAGGGATTTTCGAAGATAGCACTTCCTTTAACTAATTTGACTAGGAAGAATTCAAAATTTGTGTGGACAGAAAAGTGTGAGCAGAGCTTCTAAGAGTTGAAGAAGAGATTAGTTCTGCACCTATATTAGCACTTCCGACACCTGGAACAGAATTTGATGTTTATAGTGATGCTTCTCATCAGGGTCTAGGGTGTGTTTTGATGCAGAATGGGAAAGTAATAGCTTATGCGTCGAGACAGTTGGGAAATCATGAATGTAATTACCCGACCCACGATCTTGAATTGCTTGCTGTAGTTTTGGCATTGAAAGTTTGGCGACATTACTTGTTTAGAGAAAAATGTCATATTTATACAGATCACAAAAGTCTTAAATATATTTTTGATCAAAAAGAGTTGAATTTACGACAGAGAAGGTGGCTTGAGTTGATAAAAGAATACGATTGTACTATTGAGTATCATCCAAGAAAGGCTAATGTTGTAGCTGATGCTTTAAGCAGAAAACCTCGTGGTTCAGAAGATTCACCAAATGCAGTTAGTTTTTCAACATTGGGTGAGTTGGGCCGTTTGAATGCAAAAGTAGAAGTTAATGATCGAGGTGCCTTATTGGCTCATTTCCAGGTAAGGCCTACTTTGATTGATAGAATTGTAACAGCTCAGCTTGAAGATTCAGTACTGAGTAAGATAAAAGAAGAAGTAAAAAGCAGTCAGCGAGTAGATTATACAGTGAGAGATGATGGAGCTCTAGTTAAATATGATCGATTGTGTGTTCCTAATAATTTGAACTTGAAAAATGAAATGTTAGAAGAAGCTCATAGTTCGATTTATGCTATGCATCCAGAAAGTACAAAAATGTATCGAGCGTTGAAAGAGCACTACTGGTGGCCAGGTATGAAGAGAGAAATAGCGGAATATGTATCTAGATGTTTGATTTGCCAGCAAGTGAAACCGATACGTCAGAACGTCGCAGGACCCTTGATTTCACTTCCTATTTCAGAATGGAAATGGGAGCATGTTACGATGGATTTTCTGTTTGGACTTCCTCGTACCTTGAGTGTTTATGATGGTATTTGAGTGATAGTAGACAGGTTAACTAAAACTGCTCGATTTTTACCAATTAAAATCAATTACACGCTTGATAAGCTAGCTAAGTTATATGTTGATGAGATAGTTAGCTCGTATGGGACTCCTGTATCTATTGTTTCAGATAGAGATACCAGATTTACTTCTAAGTTCTGGCCTAGTTTACAGCAAGCTTTAGGTACTAAATTATATTTTAGTACGGCTTTTCATCCTTAGACAGATGGCCAGTCAGAGAGAACGATCAAAACTCTAGAGGATATGTTACGAGCTTGTGTTTTACAGTTCAAGGGTAGTTGGGATACTCATTTGCCTCTCATGGAATTTGCTTATAATAATATTTATCGTTCTAGTATAGAGATGGCACCGTTTGAAGCATTGTATGGCAGAAAATGTCGAACACCAGTTTGTTGGGATGAAGTTGGAGAAAGAAAGTTATTGGGGCCTGAGCTTGTTCAGATTACTACTGACAAGGTAAAGATAATTAAAGAGAATCTGAAAGTAGCACAAGACAGACATAAGAGTTATGCTGATAAACGTCGAAAAGATCTTGAATTTTCAGTAGGTGATAAAGTTTTTCTTCGCTTGTCACCGTGGAAGGGTGTTTTGAGATTCGGCCGAAAGGGGAAGTTAGGTCCTAGATATATTGGTCCATATGAGATTCTTGAGCGTGTTGGGCCAGTAGCGTATCGTTTAGCACTGCCTATGTAGCTTTCTAAGATTCATGATGTGTTTTATGTTTCTATGTTGCGTAAGTATGTACCCGACCCATTGCATATTCTTGAATCGTAGCCAGTGCAGTTAAGTGAGAATTTGTCTTACGAAGAGAAGCCAGTGCAGATTTTAGATAGGAAAGAATAGGTGTTGCGAAACAAGACTATTCCGTTAGTTAAAGTCTTATGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATAGATGCGTACTCAATACCCTCGTCTATTTCCTTAATTGTTCTGATTGAATTTCGAGGACGAAATTCTTAAAACGAGGTAATATTTTGTAAGGGTGTTTTCGTAATTTTAGGTTTTTTTTTTAAAGAAAAAAGAAAAGAAGAAAATAAAATAAAAGAAAAGGAAAGTGGAAAAGTGAGAAACAGAAGAAGATATAAAAATAATAGAGGGGGTGGTCGTCATCAATGGTGCTCAAGAAACAGGATTCAATGCTAAATTTGTCATAAATTTGGTCACACGACTGACAGATGTTATTTTCGCATGTCATACATAACACATAATGGTGCTTATACATCGAACAAATCACACCCATCCTTTACACCCGGAAGTTTTAATCAACAACCACCCATGACGGCTATGCTGATGTCTTCAGATTTGAATCGTGATACCAACTGGTATCCTGACTCGGGGGCCACTAATCATATCACTCATGATATGAATAATCTAGATATCAGTCATGAGGCCCCTAATGGCCAACAGATACAGGCAGCGAATGGATCAGGTATGAGCATAACCCATACTGGTTCTTCTTCTTTTATCTCACCTACCAACCATATTTTTCATCTTAAAAATCTCTTACACGTTCCTACTGTTACCAAAATCTCCTTAGTGTAAGCCAATTTGCTAGAGATAATCACATCTACTTTGAATTTCATCCCTCTCTTTGTTTTGTCAAGGACCAAGCCACTGGTAACACCCTTCTCCAAGGAACTATCAAGGATTGGCTCTATTCTTTTCAGTTGGATGCATCCTCAAAACTTCTAAGGATTCCTTTCTTCTCAATCCCACTATCAACAATGATGCTCAATCTTCAATCTCAGCACATTCTGCAACATATACTACTATTTGTATTTCTCAAATTGATCTATGGCATACACGTTTACGCCATCCCTCCCCCATTGTAATTAGTCAAGTTCTTAAATCTTGTACTCCACAGTTGAAAATCAATAAAAATCCTTCTTTTTGCCATGCTTGTGCCATTAGCAAACATCACTCTCTTCCTTTCCCCTCCTCAAATACTTCTTATACTGCCCCTCTCTAATTAGTGGTCTCTGATTTATGGGACCAACTTACAAATCCTTTAAAAATGGTTATAAGTACTACATTTCTTTTATTGATGTCTTTTCTCGTTTTACTTGGATCTACTTTCTAGAATCTAAGACTCAAGCTTTCTCGACTTTCGTACAATTCAAAACCCTTGTTGAAAACCTATTAAACGCTAAAATTCTCACTTTTAAACCAAACGATGGTGGGGAGTTTAAATCATTTAGTTCCTATCTAAAAACTCATGGCATTCAACATCGAATCTCCTGCCCATATACTTCCCAACAGATTGAGATATCTGAAAGAAAACACTGCCACATTGTTGACACTAGCCTAACCATGTTATCTCATTCTTCCATGCCTCTTGAATTTTGGGATGATGCATTCTTAACCGTCGTTTACCTCATTAACAGACTCCCATCACATCTCTTGATTGGCAAAGTCCTTTGGAAAAACTCTTTAATAAAAAACCCAACTACTCATTCCCAAAAACCTTCGGGTGCCTATGCTATCCATATCTTCGCCCTTACAATAATTACAAACTTCAACCTCGATGTACTCCTTGTAACTTCTTAGGCTATAGTAATATTCATAAAGGCTTCAAATGTCGTTATTCTAATGGCTGCCTTTATATTTCCCGTCATGTTCTTTTCCATATCCCTATCAAACACAAATTCAATCTCCTAATCTTACCTCTCATCCTTCCTCACTGGTACACTCATCTATTACCTGTCTCTCTCCTCCATCCACATTCCATTTCTCACCAAATTCTTCCCCAACTAGGCCCATTCCTTCGTGTCCTGTCCCTTTTAACAACAACCCCACTTAATCAATCTACTTCTCTGCCTAGTCAACCTACTCCACTGCCTTCTCCCTCGTCTACATTACCTAATCCTGACCAACCTATCAGTAATCCACCTACCATTTTACCATCATCACCTATATTACTTACTCCAACATCATCCCTACCTTCACCTACACACCCTATACCTACATCTTCTGCTCCTGCCATACCTGATCCACAAGCTATGGCTGCCTTAAATAATCACTCCATGGTCACTCGTTCTAAGAATGGCATTTTTAAATCCAAAGTGTTTCTTACTGACTATAAAGAGATAGAACCTACTACAGCCAAAGATGTCCTTAAACATTCTCATTGAAGACAGGTTATGGAAGAAGAGTACCAAGCACTTATGAAAATAATACTTGGGAGTTAGTGTCTCCTTCCTCTGATTAGAAAAGTGTGGGGTGCAAGTGGTCTTCAAGGTCAAACGAAATACGGATGGATCAATATCCCAATATAAGGCCAGACTTGTTGCCAAAGGTTTCCATCAGGCTGCCGATATTGATTACTCCGAAACGTTCATTCGAGTGGTTAAACCAATAACAATTAGAGTTCTTTTTACTCTAACCTTGGCCAATGGTTGGGATCTTCCTCAAATAGACATCAACAATGCGTTTCTACATGATTTATTACATGAAACCATTTTTATGGAGCAACCTATAGGTTTTACTAACCCGGGTTCTGGCCAACTTGTATGCAAACTGAAAAAAGCTTTATATGGTCTCAAACAGTCACCTAGGGCGTGGTTTGAATGGTTGAGCACTTTTTTGATCCAACTTGGATTTATTGGATTTAAGGCAGACCCATCCTTATTTTTCAGATTTCAAGGAGGTCATCGTTGCAACATTTTGATCTATGTGGATGATATTGTTCTCACAGGGAGCTCTAATATTGAGATTCAAACCTTAATCTCAGCTCTTCATAGCAAATTCTCCCTTAAAGACCTTGGGAAGCTCAGCTACTTCCTAGGAATTGAAGTCTTTTATCCTACAACTGATAGCATTTTTCTTTCTCAATCTAAGTATGTCACAGACCTACTATAGAAAGCTAAAATGATCGATGCAAACGCGGTAGCCACACCTATGTCTAGTGGCTCGATATTATCTGCTCGCCATGGTGATTTGCTTGCTGAACCTTTCCTCTACAGGAGCATCGTAGGGGCCTTACAGTATCTTACACTAACCTGCCCAAAAATTTCTTACTATGTTAATAAAGTATGCCAATTCATGCAGTCTCCTACTACTACCCATTGGCAACTAGTCAAGCGCATACTTTGCTATCTTAAGGGACGTTTAATCATGGTTTGTTACTTACAAAACCAGCAAACTTACATCTACATGGATATTCTGTTGCCGATTGGGCATCAGACTCTGATGACAGGAAATCTACTTCAGGGTTTTGCATTTATTTTGGAAATAACCCTATCTCTTGGGGATCTAAAAAGCAAGCCATCATTTCAAGATCAAGTACAGAGGCAGAGTACCGTGCACTAGCACTTGCTGCTTCCAAGTTGATTGGTTGAGATCTCTCTTCTCTAAGCTATGCATTTCAGTATCTCAGCCGCCTATCCTATGGTGTGATAATCTCAGCTCCGTTCACCTCTCTGCCAACCCTATTCTGCACTCACGGACAAAGCATGTTGAAATTGACATCTACTTTGTCTGTGTCTTGGTTATTTCAGTCAAACTTAAAGTGCAGCACCTTCCCTCGATTGCCCAAATTGCCGATGCTCTAACCAAGCCTCTGTCGTTTGCTCAATTTCAAGCTCTCAATGACACACTTAACGTTAAATCACCATCCACAATCGGCTTGAGGGGGGAGTTAAGAATAATCATTAAGGTTGGGTTTTGTTATTTCTTATGGTTGGCCTGTTATAACAAAATTGGGCTACTGTTGTGAAGTTTGTAATGGGCCAGACTCTATATATAGCCCTATGTTACTTATCTTAAGAAAAAAGAATCCAAGCTAATAAAAGAATTCATTCCGGATCCAAGATTTCTTTGATTTTGTCTGCCCTCTTGGGGACTGCATTGCTGGTTGCAGATGAGTACGCCCACCGCACCACCATCACGACGGTGGAGGTGGAGAAAGACAACCAATTTCCGTTCGGGAGTGGAGAAAAGTGTTAGAAGATGAGGCCCCGCGACTGCGAGAGGTTCATGAGGCAGGTGCTAGAGCGCACCAGAAGAAAGGACAACCACAACCACTGGCCGCAGGGTGAGAGGGAGAAGTAGAGCTTCGAAGAGTGCTATGGAGAGCTGAGGAATGTGGATGAGAATTGCAGGTGCGATGTGTTGGGGTAGGTTCTGTTGGCTTTTCGAGCTTCAATCATACCATATGTTTTGATGATAACAAACTTAATCTACTGATGATTTTTTGTGTCTCAAAGTGTTCAAAGTGTAGAGCTTGAAAAGACGAATCTAACGCAATTTGAATCGCTCAAATCGGAGTATAAACGAAGAAGTTAGGGCCAAAACAAAATTGGGAAGGAAAATCCTACGTGGATGATGACGTGGACACACAGACCAACCAGAATATGACACGTGGCAACATGCTGACGTGGAGCCGACGTGGATTTTCAACGGTCAGATTTTGATGATGTGACAGCTGACGTGGCACTCCAACGGTCGGATTTGATGACGTGGCATATGACGTGGCAGATGACGTGGCAACCAACTGATCTATTTGCTGATGTGACGTGACGACCAACTGATCTATTTCCCTCATAACCTATATTATTTAATATGAATCTAATTCACATTATATTAATATGAATCTTATTCATATTATTCTCATAATATATAGTTTTATAATGTATCATCATACATTATTTTAAATTGTATCATACACAATTAACTCAAATTCCCTTTAATTAAATTTGAACAATTCAAATTACTTTCCAAGATTTTATGTTCTTAATTACCCTTTACGAGCTAGCAAGGGGACCTAATGAACCTATACATCAAAAGCTTCAACGTTACGAGATTAATTTGGTTAAACTCATTAACCAACTTAATCACCATACGTTAACTACGAAGCAAGTATAAAAGGATTTTCGAGTAGCTATGTTATCAAAAGCTCCTTATCCTACATTACATACTCTTACATATATACTTCAATAGACCAATAGATCTGATAGTAGCTCACCATCATGAGAATATAGCTTGACATTAAGCTGGAATCACACAACGCTGACCCCCTTGACTGGCTTGCCAAAAAGTTGAACTGCTCGTCATTTTCGATAGGGTGGACCCTCCTTACCCCTCCCATTGACTAAGATTCATTCTTTTTTAAGTCAATATATATATCATTTTTCTTTGAGATCCATATGAGAATACTTTTCTTAACAGCATCAAACAAAAAAAACTATATCATAAGGTAAAACATACAATACCTTATTCAATGTCAAGATAAATATTGCAATATTTTTTTAATTTAAGGTAAAAATTTCAACAATTATTCAAGTTTTTTAAGAAGTAATTTGATAAAATTGTAAGCTTATACATAACAACAACGGGTAAAAATTGACCTACCTTGCCAAATTTAAGGATAAAAATTAATGTTTTCCCCGCAGTTTTTTTTCATGGGTTCATATACCATTAATATTTGGTAAATTATTGTGAAAAGTAAAAATATTTCAACTAATTTTATATTTTCTTTAATCAATTTATCAAGACACCTTTTCATATGGAAAACATCACCAAAACAGATCTGTCCTCCAAAAAGTTGTAAAAATCAAAGTACATGCATCTAGGATACAATTTAGTTGAATTTGGAGACTTTGTTCGTTCAACTTCCCAAAAATCGTTTTCTTCCTTTCCCTTTAACTTCAATGCAAAAACTCATACCCTTAACCGTATGACTATAAATTTGTGGACAAAATCTGTTTGCAGACATTCAAACCAAAAGCAAATTCTGTTCCATTTCATCACACAACTCGTTCCTTCAATAAACCACAGTAGGGTTATTTTTCTACTCATCCGAGTCATATATTATATATATTTTTCAAACAAACCGTATTGATATTTGTAATGGGTTTGAATATACGGATGCAGATCTTCGTGAAAACTCTCTGTGGGAAGAGAATTGGTTTAGACGTTTTAACGTCGGATAAGATCGCCGACGTGAAGGCCAAAATCCAAGCTGAGGTCGGCATTAGCCCTGATCGGATGAAGCTGGCTTTTGCTGGAAAAGAGCTTGACAATGCCAAAACTCTCACTCACTATGATGTGAACACCGACCGTGCATTGCACCTGGTTTATCGTGCTAATGGAGGATTTTAA

mRNA sequence

ATGCAATCCGGGCAACAAGCGGAGTCTGCTTCTAGTTATACTAGATATCCTGTATGCAAGAATTGTGGTAGTGCGTCCCAAGGAGCTTCCTCAAGACCGACGGTACAGGGACATTCAGATTCACAAGCAAAACCCGTGAGTGAGGGGCAACCAAGTACAGGAAATTCTAGTGGCGTTAAGTCGAAGGGTCAGGTAGGCAGACCACGTGGTCAGGGAAAGATATTTGCAATGACGCAGCATGAGGCTGAAGAACTGCCAAATGTAGTTACAGATAAAAAGTTAGAACCCTTACCTAGTGAATTGGTAATAGCTACACCGGGTGGTATATCTTTGATAGCAGACGGTGTGTATCGTGATTGCATAATTGATTTGGGTGATAGGCAGTTTAATGTGGATTTAGTCCCATTGAATATTCGTGAGTTTGATGTTATTTTGGGAATGGATTTCCTGTTCACACATCATGCATCGATTGACTGTTATCAGAAAGAGGTTATATTTAAACGGCCAGGGGAGGCTGAGATTATCTATAGAGATTTGAATCGTGATACCAACTGGTATCCTGACTCGGGGGCCACTAATCATATCACTCATGATATGAATAATCTAGATATCAGTCATGAGGCCCCTAATGGCCAACAGATACAGGCAGCGAATGGATCAGATGAGTACGCCCACCGCACCACCATCACGACGGTGGAGGTGGAGAAAGACAACCAATTTCCGTTCGGGAGTGGAGAAAAGTATTTTGATGATGTGACAGCTGACGTGGCACTCCAACGGTCGGATTTGATGACGTGGCATATGACGTGGCAGATGACGTGGCAACCAACTGATCTATTTGCTGATATCTTCGTGAAAACTCTCTGTGGGAAGAGAATTGGTTTAGACGTTTTAACGTCGGATAAGATCGCCGACGTGAAGGCCAAAATCCAAGCTGAGGTCGGCATTAGCCCTGATCGGATGAAGCTGGCTTTTGCTGGAAAAGAGCTTGACAATGCCAAAACTCTCACTCACTATGATGTGAACACCGACCGTGCATTGCACCTGGTTTATCGTGCTAATGGAGGATTTTAA

Coding sequence (CDS)

ATGCAATCCGGGCAACAAGCGGAGTCTGCTTCTAGTTATACTAGATATCCTGTATGCAAGAATTGTGGTAGTGCGTCCCAAGGAGCTTCCTCAAGACCGACGGTACAGGGACATTCAGATTCACAAGCAAAACCCGTGAGTGAGGGGCAACCAAGTACAGGAAATTCTAGTGGCGTTAAGTCGAAGGGTCAGGTAGGCAGACCACGTGGTCAGGGAAAGATATTTGCAATGACGCAGCATGAGGCTGAAGAACTGCCAAATGTAGTTACAGATAAAAAGTTAGAACCCTTACCTAGTGAATTGGTAATAGCTACACCGGGTGGTATATCTTTGATAGCAGACGGTGTGTATCGTGATTGCATAATTGATTTGGGTGATAGGCAGTTTAATGTGGATTTAGTCCCATTGAATATTCGTGAGTTTGATGTTATTTTGGGAATGGATTTCCTGTTCACACATCATGCATCGATTGACTGTTATCAGAAAGAGGTTATATTTAAACGGCCAGGGGAGGCTGAGATTATCTATAGAGATTTGAATCGTGATACCAACTGGTATCCTGACTCGGGGGCCACTAATCATATCACTCATGATATGAATAATCTAGATATCAGTCATGAGGCCCCTAATGGCCAACAGATACAGGCAGCGAATGGATCAGATGAGTACGCCCACCGCACCACCATCACGACGGTGGAGGTGGAGAAAGACAACCAATTTCCGTTCGGGAGTGGAGAAAAGTATTTTGATGATGTGACAGCTGACGTGGCACTCCAACGGTCGGATTTGATGACGTGGCATATGACGTGGCAGATGACGTGGCAACCAACTGATCTATTTGCTGATATCTTCGTGAAAACTCTCTGTGGGAAGAGAATTGGTTTAGACGTTTTAACGTCGGATAAGATCGCCGACGTGAAGGCCAAAATCCAAGCTGAGGTCGGCATTAGCCCTGATCGGATGAAGCTGGCTTTTGCTGGAAAAGAGCTTGACAATGCCAAAACTCTCACTCACTATGATGTGAACACCGACCGTGCATTGCACCTGGTTTATCGTGCTAATGGAGGATTTTAA

Protein sequence

MQSGQQAESASSYTRYPVCKNCGSASQGASSRPTVQGHSDSQAKPVSEGQPSTGNSSGVKSKGQVGRPRGQGKIFAMTQHEAEELPNVVTDKKLEPLPSELVIATPGGISLIADGVYRDCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIYRDLNRDTNWYPDSGATNHITHDMNNLDISHEAPNGQQIQAANGSDEYAHRTTITTVEVEKDNQFPFGSGEKYFDDVTADVALQRSDLMTWHMTWQMTWQPTDLFADIFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVNTDRALHLVYRANGGF

Homology

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BLAST of Moc10g12800 vs. NCBI nr
Match: KAA0060484.1 (Gag protease polyprotein-like protein [Cucumis melo var. makuwa] >TYK18569.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-30
Identity = 86/178 (48.31%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 11  SSYTRYPVCKNCGSASQGASSRPTVQGHSDSQAKPVSE---GQP-----STGNSSGVKSK 70
           S  ++  VC NCG         P +    ++  K  S+    QP     S   SSG K K
Sbjct: 314 SESSKSSVCYNCGQPGHYRRDCPHLIPGGNTILKTTSQTVSQQPRITITSGEGSSGGKQK 373

Query: 71  GQVGRPRGQGKIFAMTQHEAEELPNVVT---DKKLEPLPSELVIATPGGISLIADGVYRD 130
           G VGR R +GK+FAMTQ EA + PNVVT   DK+LE L  EL+I+T  G S I + VYR 
Sbjct: 374 GPVGRSRQEGKVFAMTQQEAADAPNVVTVGIDKELESLTEELLISTRIGDSFIVNSVYRK 433

Query: 131 CIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIYR 178
           C I +      VDL PLNI+EFDVILGMDFL  H+AS++C+QKE++FKRPG +EI++R
Sbjct: 434 CSILIDGETLEVDLNPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPGMSEILFR 491

[Close]

BLAST of Moc10g12800 vs. NCBI nr
Match: KAA0026229.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30722.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-28
Identity = 83/188 (44.15%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 18  VCKNCGSASQGASSRPTVQGHSDSQAKPVSEGQPSTGNSSGVKSKGQVGRPRGQGKIFAM 77
           VC NCG         P  Q H D   + V +G  S   S G    GQ GRPR QG +FAM
Sbjct: 211 VCYNCGQPGHFRKECP--QLHKD---RKVGQGASSQSVSQGY--SGQAGRPRVQGMVFAM 270

Query: 78  TQHEAEELPNVVT-------------------------------DKKLEPLPSELVIATP 137
           TQ EA + P +VT                               DK LE LPSEL+IATP
Sbjct: 271 TQQEAHKTPEIVTGMLSILGKYARVLIDPGATHSFISTMFTARIDKNLELLPSELLIATP 330

Query: 138 GGISLIADGVYRDCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIF 175
            G +L+A+ VYR+C+  +  ++   +L+PL+I EFDVILGMDFL  HHASIDC++KEV F
Sbjct: 331 VGKTLVANNVYRNCVAQIDGKELTANLIPLDIHEFDVILGMDFLSVHHASIDCHRKEVAF 390

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BLAST of Moc10g12800 vs. NCBI nr
Match: KAA0067055.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK26292.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-28
Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 18  VCKNCGSASQGASSRP--------TVQGHSDSQAKPVSEGQPSTGNSSGVKSKGQVGRPR 77
           VC NCG         P         ++  S + ++ +   + S   SSG K  G VGR R
Sbjct: 310 VCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSR 369

Query: 78  GQGKIFAMTQHEAEELPNVVT---DKKLEPLPSELVIATPGGISLIADGVYRDCIIDLGD 137
            +GK+ AMTQ EA + PNVVT   DK+LE L  EL+I+T  G S I + VYR C I + D
Sbjct: 370 QEGKVCAMTQQEAADAPNVVTIGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDD 429

Query: 138 RQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIY 177
               VDL+PLNI+EFDVILGMDFL  H+AS++C++KE++FKRP ++EII+
Sbjct: 430 ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIF 479

[Close]

BLAST of Moc10g12800 vs. NCBI nr
Match: XP_022887797.1 (uncharacterized protein LOC111403499 [Olea europaea var. sylvestris])

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-27
Identity = 75/188 (39.89%), Postives = 105/188 (55.85%), Query Frame = 0


Query: 23  GSASQGASSRPTVQGHSDSQAK--PVSEGQPSTGNSSGVKSKGQVGRPRGQGKIFAMTQH 82
           GS   GA      Q  +    K    S  Q     SSG + KGQ GRPR +G++FA+TQH
Sbjct: 314 GSLQSGAGISRQNQNQNTLAGKEGATSAIQSDATGSSGTRQKGQAGRPRTKGRVFAVTQH 373

Query: 83  EAEELPNVV---------------------------TDKKLEPLPSELVIATPGGISLIA 142
           + +E PNVV                           TD   E   S+LV+AT  G  L+A
Sbjct: 374 DVDESPNVVMGTLSIFGKKAHSLIDSGTISYAFAIYTDHMSESFDSDLVVATAVGDLLLA 433

Query: 143 DGVYRDCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAE 182
           +GVY+DC+I + D +   +L+PL+I +FDVILGM+FL  ++AS+DC++KEV+F+RPGE E
Sbjct: 434 NGVYKDCVIRVNDHELKANLIPLDIHDFDVILGMNFLSVNYASVDCFRKEVVFRRPGEPE 493

[Close]

BLAST of Moc10g12800 vs. NCBI nr
Match: KAA0035138.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-26
Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 2   QSGQQAESASSYTRYPVCKNCGSASQGASSRPTVQGHSDSQAKPVSEGQPST---GNSSG 61
           Q GQ  ES +S  R   C +CG   +       VQ     +++ V + + S      +SG
Sbjct: 349 QPGQ--ESIASTVRRTPCTSCGKNHR-------VQRDQGVRSQTVEKSRVSVVPIEGTSG 408

Query: 62  VKSKGQVGRPRGQGKIFAMTQHEAEELPNVVTDKKLEPLPSELVIATPGGISLIADGVYR 121
            + KG VGRPR QGK++AMTQ EAE+ P+V+T    EPL   L I TP G  L+ + V R
Sbjct: 409 ARQKGVVGRPRQQGKVYAMTQQEAEDAPDVIT----EPLSEGLAIYTPVGDVLLVNEVLR 468

Query: 122 DCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIYRD 181
           +C + +      VDL+PL ++  DVILGMDFLF H+AS+DC++KEV+FK+PG AE+++R 
Sbjct: 469 NCEVLVEGISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFKKPGFAEVVFRG 518

[Close]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot
Match: P59669 (Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V  SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL+ Y++ 
Sbjct: 383 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 443 KESTLHLVLRLRGGF 457

[Close]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot
Match: P0CG68 (Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.1e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V  SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL+ Y++ 
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 518

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 519 KESTLHLVLRLRGGF 533

[Close]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot
Match: P0CG85 (Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.1e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 443 KESTLHLVLRLRGGF 457

[Close]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot
Match: P0CG84 (Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.1e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 303 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 362

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 363 KESTLHLVLRLRGGF 377

[Close]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot
Match: P69322 (Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 5.1e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 367 KESTLHLVLRLRGGF 381

[Close]

BLAST of Moc10g12800 vs. ExPASy TrEMBL
Match: A0A5A7UZM6 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00750 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-30
Identity = 86/178 (48.31%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 11  SSYTRYPVCKNCGSASQGASSRPTVQGHSDSQAKPVSE---GQP-----STGNSSGVKSK 70
           S  ++  VC NCG         P +    ++  K  S+    QP     S   SSG K K
Sbjct: 314 SESSKSSVCYNCGQPGHYRRDCPHLIPGGNTILKTTSQTVSQQPRITITSGEGSSGGKQK 373

Query: 71  GQVGRPRGQGKIFAMTQHEAEELPNVVT---DKKLEPLPSELVIATPGGISLIADGVYRD 130
           G VGR R +GK+FAMTQ EA + PNVVT   DK+LE L  EL+I+T  G S I + VYR 
Sbjct: 374 GPVGRSRQEGKVFAMTQQEAADAPNVVTVGIDKELESLTEELLISTRIGDSFIVNSVYRK 433

Query: 131 CIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIYR 178
           C I +      VDL PLNI+EFDVILGMDFL  H+AS++C+QKE++FKRPG +EI++R
Sbjct: 434 CSILIDGETLEVDLNPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPGMSEILFR 491

[Close]

BLAST of Moc10g12800 vs. ExPASy TrEMBL
Match: A0A5A7SLT2 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00540 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.3e-29
Identity = 83/188 (44.15%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 18  VCKNCGSASQGASSRPTVQGHSDSQAKPVSEGQPSTGNSSGVKSKGQVGRPRGQGKIFAM 77
           VC NCG         P  Q H D   + V +G  S   S G    GQ GRPR QG +FAM
Sbjct: 211 VCYNCGQPGHFRKECP--QLHKD---RKVGQGASSQSVSQGY--SGQAGRPRVQGMVFAM 270

Query: 78  TQHEAEELPNVVT-------------------------------DKKLEPLPSELVIATP 137
           TQ EA + P +VT                               DK LE LPSEL+IATP
Sbjct: 271 TQQEAHKTPEIVTGMLSILGKYARVLIDPGATHSFISTMFTARIDKNLELLPSELLIATP 330

Query: 138 GGISLIADGVYRDCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIF 175
            G +L+A+ VYR+C+  +  ++   +L+PL+I EFDVILGMDFL  HHASIDC++KEV F
Sbjct: 331 VGKTLVANNVYRNCVAQIDGKELTANLIPLDIHEFDVILGMDFLSVHHASIDCHRKEVAF 390

[Close]

BLAST of Moc10g12800 vs. ExPASy TrEMBL
Match: A0A5D3DS52 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00670 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28
Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 18  VCKNCGSASQGASSRP--------TVQGHSDSQAKPVSEGQPSTGNSSGVKSKGQVGRPR 77
           VC NCG         P         ++  S + ++ +   + S   SSG K  G VGR R
Sbjct: 310 VCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSR 369

Query: 78  GQGKIFAMTQHEAEELPNVVT---DKKLEPLPSELVIATPGGISLIADGVYRDCIIDLGD 137
            +GK+ AMTQ EA + PNVVT   DK+LE L  EL+I+T  G S I + VYR C I + D
Sbjct: 370 QEGKVCAMTQQEAADAPNVVTIGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDD 429

Query: 138 RQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIY 177
               VDL+PLNI+EFDVILGMDFL  H+AS++C++KE++FKRP ++EII+
Sbjct: 430 ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIF 479

[Close]

BLAST of Moc10g12800 vs. ExPASy TrEMBL
Match: A0A5A7SX06 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002230 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.8e-27
Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 2   QSGQQAESASSYTRYPVCKNCGSASQGASSRPTVQGHSDSQAKPVSEGQPST---GNSSG 61
           Q GQ  ES +S  R   C +CG   +       VQ     +++ V + + S      +SG
Sbjct: 349 QPGQ--ESIASTVRRTPCTSCGKNHR-------VQRDQGVRSQTVEKSRVSVVPIEGTSG 408

Query: 62  VKSKGQVGRPRGQGKIFAMTQHEAEELPNVVTDKKLEPLPSELVIATPGGISLIADGVYR 121
            + KG VGRPR QGK++AMTQ EAE+ P+V+T    EPL   L I TP G  L+ + V R
Sbjct: 409 ARQKGVVGRPRQQGKVYAMTQQEAEDAPDVIT----EPLSEGLAIYTPVGDVLLVNEVLR 468

Query: 122 DCIIDLGDRQFNVDLVPLNIREFDVILGMDFLFTHHASIDCYQKEVIFKRPGEAEIIYRD 181
           +C + +      VDL+PL ++  DVILGMDFLF H+AS+DC++KEV+FK+PG AE+++R 
Sbjct: 469 NCEVLVEGISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFKKPGFAEVVFRG 518

[Close]

BLAST of Moc10g12800 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-25
Identity = 80/226 (35.40%), Postives = 115/226 (50.88%), Query Frame = 0


Query: 8   ESASSYTRYPVCKNCGSASQG----------------------ASSRPTVQGHSDSQAKP 67
           ES +S ++   C +CG + QG                         R  V+     ++  
Sbjct: 527 ESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHFKRDCPQLRVVVRRDQGVESHT 586

Query: 68  VSEGQPSTG---NSSGVKSKGQVGRPRGQGKIFAMTQHEAEELPNVVTD----------- 127
           V + + ST     +SG + KG VGRPR QGK++AMTQ EAE+ P+V+T+           
Sbjct: 587 VEQSRISTAAGEETSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITETILICNVPTRV 646

Query: 128 --------------------KKLEPLPSELVIATPGGISLIADGVYRDCIIDLGDRQFNV 178
                               + LEPLP ELVI TP G  L+   V  DC + +     +V
Sbjct: 647 LLDSGATHSFVSSMFLTKINRMLEPLPEELVICTPVGDVLLVSEVLCDCEVVVEGLYMSV 706

[Close]

BLAST of Moc10g12800 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 443 KESTLHLVLRLRGGF 457

[Close]

BLAST of Moc10g12800 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 215 KESTLHLVLRLRGGF 229

[Close]

BLAST of Moc10g12800 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 215 KESTLHLVLRLRGGF 229

[Close]

BLAST of Moc10g12800 vs. TAIR 10
Match: AT4G05320.3 (polyubiquitin 10 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 367 KESTLHLVLRLRGGF 381

[Close]

BLAST of Moc10g12800 vs. TAIR 10
Match: AT4G05320.4 (polyubiquitin 10 )

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-16
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 283 IFVKTLCGKRIGLDVLTSDKIADVKAKIQAEVGISPDRMKLAFAGKELDNAKTLTHYDVN 342
           IFVKTL GK I L+V +SD I +VKAKIQ + GI PD+ +L FAGK+L++ +TL  Y++ 
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442

Query: 343 TDRALHLVYRANGGF 358
            +  LHLV R  GGF
Sbjct: 443 KESTLHLVLRLRGGF 457

The following BLAST results are available for this feature:

BLAST of Moc10g12800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060484.1	7.0e-30	48.31	Gag protease polyprotein-like protein [Cucumis melo var. makuwa] >TYK18569.1 Gag...	[more]
KAA0026229.1	1.7e-28	44.15	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30722.1 D...	[more]
KAA0067055.1	2.2e-28	46.47	reverse transcriptase [Cucumis melo var. makuwa] >TYK26292.1 reverse transcripta...	[more]
XP_022887797.1	7.2e-27	39.89	uncharacterized protein LOC111403499 [Olea europaea var. sylvestris]	[more]
KAA0035138.1	1.6e-26	42.62	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc10g12800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59669	3.9e-15	54.67	Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2	[more]
P0CG68	5.1e-15	54.67	Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1	[more]
P0CG85	5.1e-15	54.67	Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1	[more]
P0CG84	5.1e-15	54.67	Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1	[more]
P69322	5.1e-15	54.67	Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2	[more]

BLAST of Moc10g12800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZM6	3.4e-30	48.31	Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7SLT2	8.3e-29	44.15	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3DS52	1.1e-28	46.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]
A0A5A7SX06	7.8e-27	42.62	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BTP3	3.3e-25	35.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]

BLAST of Moc10g12800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05320.2	3.6e-16	54.67	polyubiquitin 10	[more]
AT4G02890.1	3.6e-16	54.67	Ubiquitin family protein	[more]
AT4G05050.1	3.6e-16	54.67	ubiquitin 11	[more]
AT4G05320.3	3.6e-16	54.67	polyubiquitin 10	[more]
AT4G05320.4	3.6e-16	54.67	polyubiquitin 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 312..332 score: 45.26 coord: 291..311 score: 56.95 coord: 333..354 score: 34.97
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 281..352 e-value: 1.4E-11 score: 54.5
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 283..352 e-value: 2.2E-17 score: 62.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 281..356 score: 18.628063
None	No IPR available	PFAM	PF08284	RVP_2	coord: 94..169 e-value: 9.2E-17 score: 61.1
None	No IPR available	GENE3D	3.10.20.90		coord: 280..357 e-value: 1.2E-22 score: 81.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..69
None	No IPR available	PANTHER	PTHR10666:SF238	GH17761P	coord: 205..356
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 205..356
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 93..150 e-value: 1.8265E-8 score: 49.2572
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 77..174 e-value: 1.2E-10 score: 43.1
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 270..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g12800.1	Moc10g12800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding