Moc10g07970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g07970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	40S ribosomal protein S10-1-like
Location	chr10: 5830988 .. 5836045 (-)
RNA-Seq Expression	Moc10g07970
Synteny	Moc10g07970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGAACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTTAGTATAGGTCAGATTCCTAGTTTAGTTCGAGGTCAGAAATCATCGTACCTGATCGTGGAGGGTACAACTCAAACTTTTGAAACAATATATATATATTTTTAAGGAACTTGAAACAATATTTTTAAAACTAACCTCATTTTAGCCAAAAATATTATTAACAAAACAAAAAAAAAATTGGTTTAGTCCAAGAGGGCCGATTTTTGTTAACATACATCACATATCCTTCATCAGCAAACGCGTAGGGGATAATGCCAAATAAAATATCATAATGCATTTTGCCAAAATAAAAAAATAAATTGTTTTATCCTTACGTTTTTAGTATATTATATGGCTGACCTTGACCCACAAACATCAACATAATAGTTAGTATATATCACAAAGTAATTTTTTCGATATGTAATTTTGATTTAATAATATTTGGGGAGGGGTACGAAGATCATTAGAAGTTTTGTTAAGCATAGTTGGATTTAAAAGTGTCACCTTTTAAAAGGAGAAAACTTGGTTCCTGAAGATTGAGCAAGCTCCTCCTCCTGAATACCTGTGTGGTCCAGTGACATATAGATAAATGTTTTTCATTTTGGCCGTCTACTTTTTGGATCACAATTTCAACAAAACACTACGATCAATAAATTTTTTATAATATAGTTAGAGCGTTAGTATTAAAAGGTCTCATTGTATATGAATTTGAGTTAAATTTTGTTTGAACAATGACTAAAATTATCTTCAAAACTAGAGAGACTAAAACGAAGGTTTGAAAGAAAGGTATTTGAGTGTTGGCATGAGAAAGAAAAAGCAATAATTGATGGTTGAAATAATTATAGTTTGATAATACATTGATAAGTAAAAGGTAGAGAAAAGAATTTGTGTAGAAAAGTTGGAAGAAAATGGTGGGGAATTTTGTGTTAATATTAGGGAGTGAGTTAGAATTTAGAATTTAAAAAGAAAAAGCAATAATAGAATAGAAATGAAAGAGAAGCCGACAGTAGAGGCGCGTTAGTACTTGGCACTATTGGCATTACCATATGGACTGTTGGGTTGGCCTCCCTCTCGCAACCTTTTCCATTCATTCATTGTAGTAGTAGAATGGGCTGGGCTGGGGCCTAAATATATTATATTATTTTATATTTTATTTTTAGTAGCTCTGTCTGATAAACAATCATCTATTTATGGTGAATTATGATTGGTGCAAGAATTGGAGGGGTTAGATTCAAGAAGTGGGAAAGAACCTGCCTAGAGAAATAAAAGAGCCTAATGCTCTAGTATGTAGAATTCGAGATATGATCTTAATACGCGGAATTAGATTCACGTACCACTTGAAGTCTGTTTTTGTATTTTTAGACATTGACGAGTAGGGATCCACTCAACGGTCACGACTTGAGGTTTCAAGGGTAAGATCTACAGTAGTGGGTGAGTATTTGAGAGAGATTTTATTTGATACCTTGACTTGACCTTTATTATGATTGGAGTCTAAGTGAGGTTGGATTTGAGATACGACATAATTATTTATTGTTTATTCTTTTTTGACAAGTGAATGAACTACGTTTAGTAACTGTTTTTTCTTTCTTACCCTTTACTTTCAAGAAATAAGACAGTAATATGTTTCGCAAATGAGTCTCTTCGATTTTTTTTTATTATTATTATTATTATTTTTTTTTTTTGTAGATTACAATTAGTTTAAGAAGTTTGCTTGATGCTTGTACAGTGATGCTATGGATTCGATTTTTGTCTTTTCTTTTCTAATGTTGTGTAGTTGCTGGGGTGTTCCAAACTCATCAATTCGGTTTGGTTCTCCAAAATAATTTAATGAGAAAACAAAATCAAACTACTATATATACACAAAAACAAACAAGGCGATTTTGATTTAATTTAAATTTGATCAATATAATCTTAAAAGTTAAAATTTTCATTTTAATTATTATAATTACAGTTTAGCTTCCAGGCATAAAATTTTAGTTTGGTTCCATTTTAGTTTATATAATTACTGAAATTTCACAAATTATTCTTACACCTCTTTGATTCAGTCCTCAATTTCTTCTATTTTCAACTCAGTCATATATCTTAATATATTCAACTAATACATTTAGTTAAGCAGGGAACATAACTCATTGCTATATAAATAAAAAATTTATCATGTTGAACATTTTTTTTTAGTAATTTTGACATTAATAAGGATAATTTATGATATTTGGCTAAATATTAAATAATATAGATCAAATTACTTTTTTATAAATAGATCGAATTGAAACTTAGTCCAAACCATAAAGTAAAAATCAAATTAAAACTTGGAGCAGTTGCAAAAATATATAAAAAAATAATAGGAATTTACAAAATAGTAATCACTCTTAAATTTTGAAAAAAAAAATATATATCTATATACATATTCAAAAAATATATATCTATATACGTAGATGTCTAATCAACGCAAAAGAAACAAAAGTTTAATATACCCTTCATGAACATGGAGCACAAACGAAAATATACTTTACTATATCACTCATTTGATACACCGTTGATATTTGAAAATAAATTTGGAAGGGTAAAATTGAAATACGAAAAATAAAAAAAAAATGATTTCAAATATTTTACCATATTCGTAAAAACACGAGAGCTATTGCTATATTTGAAATATGAAAAAATTTTTAGCTCCACGCAAAACTTTTGAAACCATGGGGTCATCAAAATTATGTTCAATTCACAAGTACAAATCTTATTCAGAAAAAAAAAAGAAAAAAAAGAAATCAGAAGTACAAATCCGTAATTTAACCCATACCTTAGAGCCCATCTCCTAGTTATCCGTCCAGCAGCCCATTCTACGCAGCCCAGCGGCCCATCTATCATCTACACAGCCCACGGCCCATCCAACGCTCACAAACCCTAGCCGCTAGCTCCCCTTCTTCTCTTTTCACGGCTGCTTCCTCTTCTTCCCTTTCTACGCCCGCTCCTCCTTCTCCCATTCTTGCTGCGCGCCTCTCCCCTCTCGCCTCTACTGCTGCTGTGTTCCGTTCTTTGTGAACTTCAACCATGGTACACTCTCGCTTGTTCATCCCTCTCTTCTCTTTCAAAGCGTCTAATTTATATTTGTTTCTGTTTTCTGGTTCCAAGAATCGTGGGGGGTGTTCACAAAACGAATTGGTTTCGATCCGAGAGTGGGATTTGGAACCCTTTCGTGTATTTTGAATTGTTGTAGCGAGTAGTCGAAAATTTTGGCCACGACATTTTCTTTTCCTTGTAATGTAATTTTTCTCGTTTTGCCGTTGGTTTGGTGTGGTTTTCGGTCTCTTATAATTTATTTAACTTTTATCATTCAGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGGTATAGCCGAACTCAGTTACTCTTAAATTGGATTTTTCCTGATTCAAGGATAATTTTGAAAGTTTATTTGTTTATTGTTGTTACCATTTCAGAGGGAGTCTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATAAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTTCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTCCGGACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCAACCTTGAAAAAACAAGCCAAGCCAGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGTAAATTACCTATTCGTCATGGTTCTTTGTGGATTCATCTGTGCTTTTGGAATGGTGGTTATGGATTTTGTCGTTACAGTCTTAGTATTATAATTGGATGTGTTATTTGTAATGTGATAGTGTAATACAAATGGCTTATTTGAGTAGCTGTTTGTGTACTCTACATCTGCTTTTTTATTTAGTAGGTTATATTTATTCTTATTAGTATCATGATTGAGTTGTTGTGATTCTTATGAATTAGGGGTCCACCACGTTTTGAGGGCGAGCGGAGGTTTGGTGACCGGGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGATTTTGGTGGTGACAAGGGTGGAGCACCTGCAGACTACAGGCCTTCTTTTGGGGTAATCTTTAGACCAAACAAACCATTTTATATCATCATAGCACATCCACATGGTTGATTCTCTCGACATTTTATAATGCTGCTTTTTCCTGCTTTTGTTTTACCAACCTTGGGATGGTTATTGGAGAAAGTTCTTAAAAGCAAATAACAATCAATAGTTCATGTATCTAGTTAGAATTTTTTATTAATCTAAAGCCGTTGCACCATGAGATGGTAAAATGGTTTTGTCATTCTTAAGTAATTCGTTTATGAGTTGATTGAATGGCATCTTATAGTTATAACTTAGCCTCTTTATCTGTTCATGTCATGCTTTCATTAAAAGTGCCCCTCAATCAATTTGTATTCTCTGTTAATCACTCAGATTATAATGTCAAGTAGTATTTTATTTTCTTGTGGAATTTGCATGTCATGGTTTCTGGTAACTTGAAATAAGTTGATTTTCTTGGGATCAAGTGAAACTGAGGATTACTGGTGGTTGACATTAGCTAAGTTGGTTTTAATGATCTTTAACAATAGAGAACAGGGTGAAACTGAAATGATAAAAATGTTCTTAGAATTGAATTTGTTGGTCCTTGTATGCCATTATAAGATCGATGCCTGAATGAATTTGGACTTTATGAAACTGAAATGATAAAAATGTCCTTAGAATTGAATTTGTTGATCCTTGTATGCCATTATAAGATCGATGCCTGAATGAATTTGGACTTTATGATATCTGTTTGGTAGTTCGACGCTTTTGTAGATTGTTGTCTCATACCAAAAAAACTTCTCAGGGTCCTGGTGGAAGGCCGGGCTTTGGCCGTGGGGCTGGTAGCTATGGTGGAGGAGCTGCAAGCCCAAACCTTCCTTGA

mRNA sequence

ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGAACCTGCACAAAAAGGTGAGCACTCCGACGATCAAATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGAGTCTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATAAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTTCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTCCGGACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCAACCTTGAAAAAACAAGCCAAGCCAGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGGGTCCACCACGTTTTGAGGGCGAGCGGAGGTTTGGTGACCGGGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGATTTTGGTGGTGACAAGGGTGGAGCACCTGCAGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGCTTTGGCCGTGGGGCTGGTAGCTATGGTGGAGGAGCTGCAAGCCCAAACCTTCCTTGA

Coding sequence (CDS)

ATGCACAACAGTGTATTTCAGATTGCAGCTCGAACTCGGCCTCCGGACCGATCTGAATACTTGGGCGAACCTGCACAAAAAGGTGAGCACTCCGACGATCAAATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGAGTCTGTTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATAAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTTCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATTGAGTTCCTCCGGACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCAACCTTGAAAAAACAAGCCAAGCCAGCTGGTAGGCCCTTTGGCGGACCACCTGGCGATCGCCCACGGGGTCCACCACGTTTTGAGGGCGAGCGGAGGTTTGGTGACCGGGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGATTTTGGTGGTGACAAGGGTGGAGCACCTGCAGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGCTTTGGCCGTGGGGCTGGTAGCTATGGTGGAGGAGCTGCAAGCCCAAACCTTCCTTGA

Protein sequence

MHNSVFQIAARTRPPDRSEYLGEPAQKGEHSDDQIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP

Homology

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BLAST of Moc10g07970 vs. NCBI nr
Match: XP_022136909.1 (40S ribosomal protein S10-1-like [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 7.5e-96
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR 121

Query: 155 FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP 214
           FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
Sbjct: 122 FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP 180

[Close]

BLAST of Moc10g07970 vs. NCBI nr
Match: XP_004146529.1 (40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein Csa_014962 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA S NL
Sbjct: 122 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNL 181

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BLAST of Moc10g07970 vs. NCBI nr
Match: TYK16623.1 (40S ribosomal protein S10-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 25  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 84

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 85  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 144

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NL
Sbjct: 145 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNL 204

[Close]

BLAST of Moc10g07970 vs. NCBI nr
Match: XP_008452010.1 (PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NL
Sbjct: 122 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNL 181

[Close]

BLAST of Moc10g07970 vs. NCBI nr
Match: XP_022982956.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023528948.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 5.5e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA-ASPNL 214
           RFGDRDGYRGGPRGP G+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA AS NL
Sbjct: 122 RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSNL 181

[Close]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-74
Identity = 145/181 (80.11%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           II +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W
Sbjct: 2   IIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGER 154
            +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG+R
Sbjct: 62  QYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDR 121

Query: 155 -RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPN 213
            RFGDRDGYRGGPRG  GDFGG+KGGAPA+++PSF   GGRPGFGR G G +G G  S +
Sbjct: 122 PRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSSS 181

[Close]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-74
Identity = 145/181 (80.11%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           II +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W
Sbjct: 2   IIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGER 154
            +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG+R
Sbjct: 62  QYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDR 121

Query: 155 -RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAASPN 213
            RFGDRDGYRGGPRG  GDFGG+KGGAPA+++PSF   GGRPGFGR G G +G G  S +
Sbjct: 122 PRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSSS 181

[Close]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-73
Identity = 142/176 (80.68%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER- 154
           MHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G+R 
Sbjct: 62  MHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRP 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS 210
           RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Sbjct: 122 RFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPS 172

[Close]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 7.3e-70
Identity = 140/176 (79.55%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER- 154
           MHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGP    G+R 
Sbjct: 62  MHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDRP 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS 210
           RFGDRDGYR GPR  GG+FGG+KGGAPADY+PSF G G   GFGRGAG Y   A S
Sbjct: 122 RFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPS 174

[Close]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 9.5e-70
Identity = 145/182 (79.67%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFA 94
           IISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 2   IISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFA 61

Query: 95  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER 154
           WMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR +GER
Sbjct: 62  WMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPN 214
           RFGDRDGYRGGP+  GG++ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  +
Sbjct: 122 RFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGSD 180

[Close]

BLAST of Moc10g07970 vs. ExPASy TrEMBL
Match: A0A6J1C5N2 (40S ribosomal protein S10-1-like OS=Momordica charantia OX=3673 GN=LOC111008485 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.6e-96
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR 121

Query: 155 FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP 214
           FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP
Sbjct: 122 FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAASPNLP 180

[Close]

BLAST of Moc10g07970 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.4e-92
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA S NL
Sbjct: 122 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNL 181

[Close]

BLAST of Moc10g07970 vs. ExPASy TrEMBL
Match: A0A5D3CXK7 (40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004510 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 25  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 84

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 85  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 144

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NL
Sbjct: 145 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNL 204

[Close]

BLAST of Moc10g07970 vs. ExPASy TrEMBL
Match: A0A1S3BST3 (40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA-SPNL 214
           RFGDRDGYRGGPRGPGG+FGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA S NL
Sbjct: 122 RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNL 181

[Close]

BLAST of Moc10g07970 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.7e-91
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE-GER 154
           MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFE GER
Sbjct: 62  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG-AASPNL 214
           RFGDRDGYRGGPRGP G+FGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AAS NL
Sbjct: 122 RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNL 181

[Close]

BLAST of Moc10g07970 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 142/176 (80.68%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER- 154
           MHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G+R 
Sbjct: 62  MHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRP 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS 210
           RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Sbjct: 122 RFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPS 172

[Close]

BLAST of Moc10g07970 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 265.0 bits (676), Expect = 5.2e-71
Identity = 140/176 (79.55%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER- 154
           MHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGP    G+R 
Sbjct: 62  MHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDRP 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS 210
           RFGDRDGYR GPR  GG+FGG+KGGAPADY+PSF G G   GFGRGAG Y   A S
Sbjct: 122 RFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPS 174

[Close]

BLAST of Moc10g07970 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 264.6 bits (675), Expect = 6.8e-71
Identity = 145/182 (79.67%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFA 94
           IISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 2   IISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFA 61

Query: 95  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGER 154
           WMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR +GER
Sbjct: 62  WMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGER 121

Query: 155 RFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAASPN 214
           RFGDRDGYRGGP+  GG++ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  +
Sbjct: 122 RFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGSD 180

[Close]

BLAST of Moc10g07970 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 221.9 bits (564), Expect = 5.0e-58
Identity = 118/175 (67.43%), Postives = 128/175 (73.14%), Query Frame = 0


Query: 35  IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAW 94
           IISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAW
Sbjct: 2   IISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAW 61

Query: 95  MHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERR 154
           MHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G              
Sbjct: 62  MHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG-------------- 121

Query: 155 FGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAS 210
                             G +KGGAPAD++PSF G GGRPGFGRGAG Y   A S
Sbjct: 122 ------------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPS 144

[Close]

BLAST of Moc10g07970 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-51
Identity = 110/137 (80.29%), Postives = 120/137 (87.59%), Query Frame = 0


Query: 79  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 138
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 139 PGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSF-GGPGG-RPGF 198
            GDRPRGPPR +GERRFGDRDGYRGGP+  GG++ GDK GAPADY+P F GG GG R GF
Sbjct: 61  GGDRPRGPPRGDGERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGF 120

Query: 199 GRGAGSYGGGAASPNLP 214
           GRGAG +GGGAA  +LP
Sbjct: 121 GRGAGGFGGGAAGSDLP 134

The following BLAST results are available for this feature:

BLAST of Moc10g07970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136909.1	7.5e-96	100.00	40S ribosomal protein S10-1-like [Momordica charantia]	[more]
XP_004146529.1	1.1e-91	97.79	40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein C...	[more]
TYK16623.1	3.2e-91	97.24	40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]	[more]
XP_008452010.1	3.2e-91	97.24	PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]	[more]
XP_022982956.1	5.5e-91	97.24	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosoma...	[more]

BLAST of Moc10g07970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKK8	3.7e-74	80.11	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	3.7e-74	80.11	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9SW09	3.2e-73	80.68	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
Q9LTF2	7.3e-70	79.55	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	9.5e-70	79.67	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Moc10g07970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5N2	3.6e-96	100.00	40S ribosomal protein S10-1-like OS=Momordica charantia OX=3673 GN=LOC111008485 ...	[more]
A0A0A0KUQ3	5.4e-92	97.79	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]
A0A5D3CXK7	1.6e-91	97.24	40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BST3	1.6e-91	97.24	40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV...	[more]
A0A6J1JA51	2.7e-91	97.24	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]

BLAST of Moc10g07970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	2.3e-74	80.68	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	5.2e-71	79.55	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	6.8e-71	79.67	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	5.0e-58	67.43	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	2.1e-51	80.29	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 35..137 e-value: 4.2E-46 score: 157.1
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 36..127 e-value: 1.6E-42 score: 143.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..33
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 22..213
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 22..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g07970.1	Moc10g07970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome