Moc09g30990 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g30990
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ubiquitin carboxyl-terminal hydrolase
Location	chr9: 23421348 .. 23421674 (+)
RNA-Seq Expression	Moc09g30990
Synteny	Moc09g30990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAACGGAGTACAAGAGCCAGTAGAAGACGAGGGCGGCGGCGATCAAGAGCGCGTTCCGCTGGCTCTTCATGATGGATTTCTGGTGGCGAAGGAACTCGGAGGGGGTGCAGGAGTCAGATTCGCAACTGGGGCGAGTCTCGTATTTCCAGTAGATGTCCATGAGCAAGAAGAGGCAAAAGGGGACGACGGAGAGGAAGGGCTTGAGGAGATTGCGAGTGACGGCGATGAGGCCCTTGCGGAGGCCGTCGAGGCCTGGGATGGTGAGGAGGAGGACCATGATCGCCTCGGCGGCGGCAGCGTAGCCAAGAACAACCCATTCTAG

mRNA sequence

ATGAGTAACGGAGTACAAGAGCCAGTAGAAGACGAGGGCGGCGGCGATCAAGAGCGCGTTCCGCTGGCTCTTCATGATGGATTTCTGGTGGCGAAGGAACTCGGAGGGGGTGCAGGAGTCAGATTCGCAACTGGGGCGAGTCTCGTATTTCCAGTAGATGTCCATGAGCAAGAAGAGGCAAAAGGGGACGACGGAGAGGAAGGGCTTGAGGAGATTGCGAGTGACGGCGATGAGGCCCTTGCGGAGGCCGTCGAGGCCTGGGATGGTGAGGAGGAGGACCATGATCGCCTCGGCGGCGGCAGCGTAGCCAAGAACAACCCATTCTAG

Coding sequence (CDS)

ATGAGTAACGGAGTACAAGAGCCAGTAGAAGACGAGGGCGGCGGCGATCAAGAGCGCGTTCCGCTGGCTCTTCATGATGGATTTCTGGTGGCGAAGGAACTCGGAGGGGGTGCAGGAGTCAGATTCGCAACTGGGGCGAGTCTCGTATTTCCAGTAGATGTCCATGAGCAAGAAGAGGCAAAAGGGGACGACGGAGAGGAAGGGCTTGAGGAGATTGCGAGTGACGGCGATGAGGCCCTTGCGGAGGCCGTCGAGGCCTGGGATGGTGAGGAGGAGGACCATGATCGCCTCGGCGGCGGCAGCGTAGCCAAGAACAACCCATTCTAG

Protein sequence

MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEAKGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNPF

Homology

[Close]

BLAST of Moc09g30990 vs. NCBI nr
Match: TQD73298.1 (hypothetical protein C1H46_041171 [Malus baccata])

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28
Identity = 72/107 (67.29%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV+EPVED+GGGDQERV LALHD  LVA+ L G AGV FA  ASLV PVDVHEQEEA
Sbjct: 86  VGDGVEEPVEDQGGGDQERVALALHDRLLVAEVLRGSAGVAFAARASLVLPVDVHEQEEA 145

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNP 108
           +    E+  EE+  DGDEALAEAVEA D EEE HDRL GG V ++NP
Sbjct: 146 ERHHREKRFEEVTGDGDEALAEAVEAGDREEEHHDRLRGGGVPEDNP 192

[Close]

BLAST of Moc09g30990 vs. NCBI nr
Match: KOM26843.1 (hypothetical protein LR48_Vigan325s001500 [Vigna angularis])

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV+EPVE+EGGGD++ V L LHDGFLVA+  GGGAG   A GA LV PV+VHE+EEA
Sbjct: 86  VGDGVEEPVEEEGGGDEKGVALTLHDGFLVAEVFGGGAGFTLAAGARLVLPVNVHEEEEA 145

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVA 104
           +GDD EE L+++A D D+  AE +EA D EE DH  L GGSVA
Sbjct: 146 EGDDREERLQQVAGDRDQTFAEGIEAGDREENDHYGLCGGSVA 188

[Close]

BLAST of Moc09g30990 vs. NCBI nr
Match: AFK37444.1 (unknown [Lotus japonicus])

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV++PVE+E G D+ERV LALHDGFLV + L   AG+  A    LV PV+VH++EE 
Sbjct: 29  VGDGVEKPVEEERGSDEERVALALHDGFLVTEVLRRSAGITVAAWPRLVLPVNVHQEEET 88

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNP 108
           +    +E LEE+  D DEAL E VEA D E++ H RL GGSV +NNP
Sbjct: 89  ERHHRQERLEEVPGDRDEALPETVEAGDREQQHHYRLRGGSVTENNP 135

[Close]

BLAST of Moc09g30990 vs. NCBI nr
Match: KZV33777.1 (ubiquitin carboxyl-terminal hydrolase [Dorcoceras hygrometricum])

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-18
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 3   NGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEAKG 62
           N V+EPVE++   DQ RV L LH  FLVA+ L GGA + FATG+ LV PVDVH++E+ +G
Sbjct: 38  NRVEEPVENQRRRDQNRVALRLHGRFLVAEVLRGGARLGFATGSGLVLPVDVHKKEQTEG 97

Query: 63  DDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNPF 109
           ++GEE L++  S  DEALA+ V+A + ++E+HD L    VA+NNPF
Sbjct: 98  NNGEERLQQAPSHADEALAKRVQARNCQQEEHDCLRRSRVAQNNPF 143

[Close]

BLAST of Moc09g30990 vs. NCBI nr
Match: KAD7478503.1 (hypothetical protein E3N88_01639 [Mikania micrantha])

HSP 1 Score: 84.7 bits (208), Expect = 5.2e-13
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + N VQ+PV+ E    ++RV LALHD FLV + +GG A  RFA G   V PVDV +QE+A
Sbjct: 37  LGNRVQDPVKHERSRYKQRVALALHDRFLVMEMIGGQAVHRFAAGPGFVLPVDVQQQEDA 96

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEA 87
           K DDGEEG EE   +GD+A  E  +A
Sbjct: 97  KRDDGEEGFEEAGCNGDQAFPEGAQA 122

[Close]

BLAST of Moc09g30990 vs. ExPASy TrEMBL
Match: A0A540KGE3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_041171 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.8e-28
Identity = 72/107 (67.29%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV+EPVED+GGGDQERV LALHD  LVA+ L G AGV FA  ASLV PVDVHEQEEA
Sbjct: 86  VGDGVEEPVEDQGGGDQERVALALHDRLLVAEVLRGSAGVAFAARASLVLPVDVHEQEEA 145

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNP 108
           +    E+  EE+  DGDEALAEAVEA D EEE HDRL GG V ++NP
Sbjct: 146 ERHHREKRFEEVTGDGDEALAEAVEAGDREEEHHDRLRGGGVPEDNP 192

[Close]

BLAST of Moc09g30990 vs. ExPASy TrEMBL
Match: A0A0L9T8D3 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan325s001500 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV+EPVE+EGGGD++ V L LHDGFLVA+  GGGAG   A GA LV PV+VHE+EEA
Sbjct: 86  VGDGVEEPVEEEGGGDEKGVALTLHDGFLVAEVFGGGAGFTLAAGARLVLPVNVHEEEEA 145

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVA 104
           +GDD EE L+++A D D+  AE +EA D EE DH  L GGSVA
Sbjct: 146 EGDDREERLQQVAGDRDQTFAEGIEAGDREENDHYGLCGGSVA 188

[Close]

BLAST of Moc09g30990 vs. ExPASy TrEMBL
Match: I3SB02 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.8e-20
Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + +GV++PVE+E G D+ERV LALHDGFLV + L   AG+  A    LV PV+VH++EE 
Sbjct: 29  VGDGVEKPVEEERGSDEERVALALHDGFLVTEVLRRSAGITVAAWPRLVLPVNVHQEEET 88

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNP 108
           +    +E LEE+  D DEAL E VEA D E++ H RL GGSV +NNP
Sbjct: 89  ERHHRQERLEEVPGDRDEALPETVEAGDREQQHHYRLRGGSVTENNP 135

[Close]

BLAST of Moc09g30990 vs. ExPASy TrEMBL
Match: A0A2Z7BI88 (Ubiquitin carboxyl-terminal hydrolase OS=Dorcoceras hygrometricum OX=472368 GN=F511_16010 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.3e-19
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 3   NGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEAKG 62
           N V+EPVE++   DQ RV L LH  FLVA+ L GGA + FATG+ LV PVDVH++E+ +G
Sbjct: 38  NRVEEPVENQRRRDQNRVALRLHGRFLVAEVLRGGARLGFATGSGLVLPVDVHKKEQTEG 97

Query: 63  DDGEEGLEEIASDGDEALAEAVEAWDGEEEDHDRLGGGSVAKNNPF 109
           ++GEE L++  S  DEALA+ V+A + ++E+HD L    VA+NNPF
Sbjct: 98  NNGEERLQQAPSHADEALAKRVQARNCQQEEHDCLRRSRVAQNNPF 143

[Close]

BLAST of Moc09g30990 vs. ExPASy TrEMBL
Match: A0A5N6Q248 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_01639 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MSNGVQEPVEDEGGGDQERVPLALHDGFLVAKELGGGAGVRFATGASLVFPVDVHEQEEA 60
           + N VQ+PV+ E    ++RV LALHD FLV + +GG A  RFA G   V PVDV +QE+A
Sbjct: 37  LGNRVQDPVKHERSRYKQRVALALHDRFLVMEMIGGQAVHRFAAGPGFVLPVDVQQQEDA 96

Query: 61  KGDDGEEGLEEIASDGDEALAEAVEA 87
           K DDGEEG EE   +GD+A  E  +A
Sbjct: 97  KRDDGEEGFEEAGCNGDQAFPEGAQA 122

The following BLAST results are available for this feature:

BLAST of Moc09g30990 vs. NCBI nr


Match Name	E-value	Identity	Description
TQD73298.1	5.8e-28	67.29	hypothetical protein C1H46_041171 [Malus baccata]	[more]
KOM26843.1	1.0e-24	61.17	hypothetical protein LR48_Vigan325s001500 [Vigna angularis]	[more]
AFK37444.1	9.8e-20	53.27	unknown [Lotus japonicus]	[more]
KZV33777.1	1.1e-18	52.83	ubiquitin carboxyl-terminal hydrolase [Dorcoceras hygrometricum]	[more]
KAD7478503.1	5.2e-13	52.33	hypothetical protein E3N88_01639 [Mikania micrantha]	[more]

BLAST of Moc09g30990 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g30990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A540KGE3	2.8e-28	67.29	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_041171 PE=4 SV=1	[more]
A0A0L9T8D3	4.9e-25	61.17	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan325s001500 P...	[more]
I3SB02	4.8e-20	53.27	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
A0A2Z7BI88	5.3e-19	52.83	Ubiquitin carboxyl-terminal hydrolase OS=Dorcoceras hygrometricum OX=472368 GN=F...	[more]
A0A5N6Q248	2.5e-13	52.33	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_01639 PE=4 SV=1	[more]

BLAST of Moc09g30990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g30990.1	Moc09g30990.1	mRNA