Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACGAAGGATTCTTCGGGTCAACCTCTAACAACTCTCAACAAGCCACTGCCTTTTCAGCCATCAACATGTCATTCAGCCACCCTCTAAGCACAGTTCTCACAGTAAAACTTGACGACAAGAACTACACACTATGGAAAGGAATGGTCCTTGCGGTCTTGCGAGGTCAAAAAGTCGACGGCTATGTTCTCGAGATAAAAACATGTCCTTCCAAATACACTAGGACAACAAGTGACACTGGGTTAGAACCAGCACTCAATCCGGCATACGAAGAATGGTTCGCTGTAGACTAGGCCCTTTGTGGATGGCTGTTCGGGTCCATGACACCATCCATCACTGCTGATGTTGTCAATCTCCAAACCTAAAATGAAGTATGGACTGCTCTAGAAATGCTCTTCGGGTCAACCAGCAAGGCACGCATCAATCAATTAAGAAACAGTCTGCAAAACACCAAAAAGGGAGCCATGAAAATGACAAAATATCTCGCTTTCATGAAACAGACCTCCGAAGATCTGAAACTCGCTGGTGAACCCGTTACGCTAAGCTATTTGTCATCATGCATATTGACGGGCCTTGAGGCAGAATATTTACCGATTCTTTGCACAATCGAAGATAAAGGTATACTATCTTGGCAAGATTTATATTCTACTCTTATAACGTTTGAAAATACTCTTGTGCGACTCAACTTGGTGAATACAAGTGGAGATCTAGGAAATGTCATTGCCAATTATGTTTACAGCCGATAGAGCCAACCCTACAACAATAGACAGCAGCAATATTCTTCAAATCGATTCCATGGACAGTCACGGGAAAGCAACAACAGTGCACGGGGGACTGGTAGAAACAGAGGGCAAGGTGAGGTAG
mRNA sequence
ATGGCAAACGAAGGATTCTTCGGGTCAACCTCTAACAACTCTCAACAAGCCACTGCCTTTTCAGCCATCAACATGTCATTCAGCCACCCTCTAAGCACAGTTCTCACAGTAAAACTTGACGACAAGAACTACACACTATGGAAAGGAATGGTCCTTGCGGTCTTGCGAGGTCAAAAAGTCGACGGCTATGTTCTCGAGATAAAAACATGTCCTTCCAAATACACTAGGACAACAAGTGACACTGGGTTAGAACCAGCACTCAATCCGGCATACGAAGAATGCAAGGCACGCATCAATCAATTAAGAAACAGTCTGCAAAACACCAAAAAGGGAGCCATGAAAATGACAAAATATCTCGCTTTCATGAAACAGACCTCCGAAGATCTGAAACTCGCTGGTGAACCCGTTACGCTAAGCTATTTGTCATCATGCATATTGACGGGCCTTGAGGCAGAATATTTACCGATTCTTTGCACAATCGAAGATAAAGCCGATAGAGCCAACCCTACAACAATAGACAGCAGCAATATTCTTCAAATCGATTCCATGGACAGTCACGGGAAAGCAACAACAGTGCACGGGGGACTGGTAGAAACAGAGGGCAAGGTGAGGTAG
Coding sequence (CDS)
ATGGCAAACGAAGGATTCTTCGGGTCAACCTCTAACAACTCTCAACAAGCCACTGCCTTTTCAGCCATCAACATGTCATTCAGCCACCCTCTAAGCACAGTTCTCACAGTAAAACTTGACGACAAGAACTACACACTATGGAAAGGAATGGTCCTTGCGGTCTTGCGAGGTCAAAAAGTCGACGGCTATGTTCTCGAGATAAAAACATGTCCTTCCAAATACACTAGGACAACAAGTGACACTGGGTTAGAACCAGCACTCAATCCGGCATACGAAGAATGCAAGGCACGCATCAATCAATTAAGAAACAGTCTGCAAAACACCAAAAAGGGAGCCATGAAAATGACAAAATATCTCGCTTTCATGAAACAGACCTCCGAAGATCTGAAACTCGCTGGTGAACCCGTTACGCTAAGCTATTTGTCATCATGCATATTGACGGGCCTTGAGGCAGAATATTTACCGATTCTTTGCACAATCGAAGATAAAGCCGATAGAGCCAACCCTACAACAATAGACAGCAGCAATATTCTTCAAATCGATTCCATGGACAGTCACGGGAAAGCAACAACAGTGCACGGGGGACTGGTAGAAACAGAGGGCAAGGTGAGGTAG
Protein sequence
MANEGFFGSTSNNSQQATAFSAINMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKYTRTTSDTGLEPALNPAYEECKARINQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPILCTIEDKADRANPTTIDSSNILQIDSMDSHGKATTVHGGLVETEGKVR
Homology
BLAST of Moc09g27700 vs. NCBI nr
Match:
XP_022143579.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia])
HSP 1 Score: 340.5 bits (872), Expect = 1.0e-89
Identity = 187/248 (75.40%), Postives = 190/248 (76.61%), Query Frame = 0
Query: 1 MANEGFFGSTSNNSQQATAFSAINMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKV 60
MANEGF GST+NNSQQAT FSAIN+SF HPLST LTVKLDDKNYTLWKGMVLAVL GQKV
Sbjct: 1 MANEGFSGSTTNNSQQATVFSAINISFGHPLSTALTVKLDDKNYTLWKGMVLAVLPGQKV 60
Query: 61 DGYVLEIKTCPSKYTRTTSDTG-LEPALNPAYEE-------------------------- 120
DGYVL KTCPSKYT TTSDTG LEP LNPAYEE
Sbjct: 61 DGYVLRTKTCPSKYTTTTSDTGMLEPTLNPAYEEWSAVDQAFCGWLFGSMTPSIAADVVN 120
Query: 121 ------------------CKARINQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEP 180
KARINQLRNSLQNTKKGAMKMT YLAFMKQTSEDLKLAGEP
Sbjct: 121 LQTSNEVWTALEMLFGSTSKARINQLRNSLQNTKKGAMKMTXYLAFMKQTSEDLKLAGEP 180
Query: 181 VTLSYLSSCILTGLEAEYLPILCTIEDKADRANPTTIDSSNILQIDSMDSHGKATTVHGG 204
VTLSYLSSCILTG EAEYLPILCTIEDKADRANPTTID+SNILQIDSMD HGKATTVHGG
Sbjct: 181 VTLSYLSSCILTGXEAEYLPILCTIEDKADRANPTTIDNSNILQIDSMDCHGKATTVHGG 240
BLAST of Moc09g27700 vs. NCBI nr
Match:
XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])
HSP 1 Score: 158.7 bits (400), Expect = 5.4e-35
Identity = 93/186 (50.00%), Postives = 107/186 (57.53%), Query Frame = 0
Query: 24 NMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKY--TRTTSDT 83
N SF HPL TVLTVKLDDKNY+LW+GMVLAVLRGQK DGYVL P ++ + T T
Sbjct: 31 NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90
Query: 84 GLEPALNPAYEE--------------------------------------------CKAR 143
+NP Y E KAR
Sbjct: 91 SDHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKAR 150
Query: 144 INQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPIL 164
INQLRN LQNTKK ++KM++YL MKQ SE LKLAGEPV +YL SC+L+GLEAEYLPI+
Sbjct: 151 INQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210
BLAST of Moc09g27700 vs. NCBI nr
Match:
XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])
HSP 1 Score: 158.7 bits (400), Expect = 5.4e-35
Identity = 93/186 (50.00%), Postives = 107/186 (57.53%), Query Frame = 0
Query: 24 NMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKY--TRTTSDT 83
N SF HPL TVLTVKLDDKNY+LW+GMVLAVLRGQK DGYVL P ++ + T T
Sbjct: 31 NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90
Query: 84 GLEPALNPAYEE--------------------------------------------CKAR 143
+NP Y E KAR
Sbjct: 91 SDHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKAR 150
Query: 144 INQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPIL 164
INQLRN LQNTKK ++KM++YL MKQ SE LKLAGEPV +YL SC+L+GLEAEYLPI+
Sbjct: 151 INQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210
BLAST of Moc09g27700 vs. NCBI nr
Match:
GAU21262.1 (hypothetical protein TSUD_286720 [Trifolium subterraneum])
HSP 1 Score: 96.7 bits (239), Expect = 2.5e-16
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 0
Query: 21 SAINMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKYTRTTSD 80
SA N + + L T ++VKLD NY LWK +VL ++RG ++DGY+L K CP K+ T +
Sbjct: 3 SAANTNQKNDLPTTVSVKLDRDNYPLWKSLVLPLIRGCRLDGYMLGTKECPEKFVTTNNT 62
Query: 81 TGLEPALNPAYEE--------------------------------------------CKA 140
T +NP YEE ++
Sbjct: 63 T---KKVNPEYEEWIAHDQALLGWLRNSMAIDIATQLLHCETSKELWDEAQSLAGAHTRS 122
Query: 141 RINQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPI 164
RI L++ NT+KG MKM +YL MK ++ LK+AG P++ S L L GL+AE+ P+
Sbjct: 123 RIIYLKSEFHNTRKGEMKMDQYLIKMKNLADKLKMAGSPISNSDLMIQTLNGLDAEHNPV 182
BLAST of Moc09g27700 vs. NCBI nr
Match:
TXG47047.1 (hypothetical protein EZV62_026341 [Acer yangbiense])
HSP 1 Score: 95.1 bits (235), Expect = 7.3e-16
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0
Query: 29 HPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKYTR--TTSDTGLEPA 88
HPL + +VKL+ +NY LWK +VL V+RG +++G++ + CP KY + + E
Sbjct: 170 HPLGSYCSVKLNHENYLLWKNLVLPVIRGNRLEGFITGTRKCPPKYVPAIVSEEVSDEAQ 229
Query: 89 LNPAYEE----------------------------CKARINQLRNSLQNTKKGAMKMTKY 148
NP +EE K+ I + Q KKG MKM+ Y
Sbjct: 230 ENPEHEEWVVQDQILLGCETSKDLWDSIKDLFGIKTKSNIAYYKKEFQELKKGGMKMSDY 289
Query: 149 LAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEA-EYLPILCTIEDKAD 166
L K+ ++L LAG PV L L S IL GL++ EY P++C I +K D
Sbjct: 290 LKMAKRLIDNLALAGRPVPLEDLVSQILNGLDSHEYNPLVCQINEKED 337
BLAST of Moc09g27700 vs. ExPASy TrEMBL
Match:
A0A6J1CPQ7 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111013443 PE=4 SV=1)
HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 187/248 (75.40%), Postives = 190/248 (76.61%), Query Frame = 0
Query: 1 MANEGFFGSTSNNSQQATAFSAINMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKV 60
MANEGF GST+NNSQQAT FSAIN+SF HPLST LTVKLDDKNYTLWKGMVLAVL GQKV
Sbjct: 1 MANEGFSGSTTNNSQQATVFSAINISFGHPLSTALTVKLDDKNYTLWKGMVLAVLPGQKV 60
Query: 61 DGYVLEIKTCPSKYTRTTSDTG-LEPALNPAYEE-------------------------- 120
DGYVL KTCPSKYT TTSDTG LEP LNPAYEE
Sbjct: 61 DGYVLRTKTCPSKYTTTTSDTGMLEPTLNPAYEEWSAVDQAFCGWLFGSMTPSIAADVVN 120
Query: 121 ------------------CKARINQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEP 180
KARINQLRNSLQNTKKGAMKMT YLAFMKQTSEDLKLAGEP
Sbjct: 121 LQTSNEVWTALEMLFGSTSKARINQLRNSLQNTKKGAMKMTXYLAFMKQTSEDLKLAGEP 180
Query: 181 VTLSYLSSCILTGLEAEYLPILCTIEDKADRANPTTIDSSNILQIDSMDSHGKATTVHGG 204
VTLSYLSSCILTG EAEYLPILCTIEDKADRANPTTID+SNILQIDSMD HGKATTVHGG
Sbjct: 181 VTLSYLSSCILTGXEAEYLPILCTIEDKADRANPTTIDNSNILQIDSMDCHGKATTVHGG 240
BLAST of Moc09g27700 vs. ExPASy TrEMBL
Match:
A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 2.6e-35
Identity = 93/186 (50.00%), Postives = 107/186 (57.53%), Query Frame = 0
Query: 24 NMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKY--TRTTSDT 83
N SF HPL TVLTVKLDDKNY+LW+GMVLAVLRGQK DGYVL P ++ + T T
Sbjct: 31 NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90
Query: 84 GLEPALNPAYEE--------------------------------------------CKAR 143
+NP Y E KAR
Sbjct: 91 SDHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKAR 150
Query: 144 INQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPIL 164
INQLRN LQNTKK ++KM++YL MKQ SE LKLAGEPV +YL SC+L+GLEAEYLPI+
Sbjct: 151 INQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210
BLAST of Moc09g27700 vs. ExPASy TrEMBL
Match:
A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 2.6e-35
Identity = 93/186 (50.00%), Postives = 107/186 (57.53%), Query Frame = 0
Query: 24 NMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKY--TRTTSDT 83
N SF HPL TVLTVKLDDKNY+LW+GMVLAVLRGQK DGYVL P ++ + T T
Sbjct: 31 NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90
Query: 84 GLEPALNPAYEE--------------------------------------------CKAR 143
+NP Y E KAR
Sbjct: 91 SDHLQVNPEYVEWQAVDQALLGWLFGSMTPSIACDVVDFRSSREVWKALEDLYGATSKAR 150
Query: 144 INQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPIL 164
INQLRN LQNTKK ++KM++YL MKQ SE LKLAGEPV +YL SC+L+GLEAEYLPI+
Sbjct: 151 INQLRNVLQNTKKNSLKMSEYLGLMKQASESLKLAGEPVAFNYLMSCVLSGLEAEYLPIV 210
BLAST of Moc09g27700 vs. ExPASy TrEMBL
Match:
A0A2Z6M732 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_286720 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 0
Query: 21 SAINMSFSHPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKYTRTTSD 80
SA N + + L T ++VKLD NY LWK +VL ++RG ++DGY+L K CP K+ T +
Sbjct: 3 SAANTNQKNDLPTTVSVKLDRDNYPLWKSLVLPLIRGCRLDGYMLGTKECPEKFVTTNNT 62
Query: 81 TGLEPALNPAYEE--------------------------------------------CKA 140
T +NP YEE ++
Sbjct: 63 T---KKVNPEYEEWIAHDQALLGWLRNSMAIDIATQLLHCETSKELWDEAQSLAGAHTRS 122
Query: 141 RINQLRNSLQNTKKGAMKMTKYLAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEAEYLPI 164
RI L++ NT+KG MKM +YL MK ++ LK+AG P++ S L L GL+AE+ P+
Sbjct: 123 RIIYLKSEFHNTRKGEMKMDQYLIKMKNLADKLKMAGSPISNSDLMIQTLNGLDAEHNPV 182
BLAST of Moc09g27700 vs. ExPASy TrEMBL
Match:
A0A5C7GRG7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026341 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 3.5e-16
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0
Query: 29 HPLSTVLTVKLDDKNYTLWKGMVLAVLRGQKVDGYVLEIKTCPSKYTR--TTSDTGLEPA 88
HPL + +VKL+ +NY LWK +VL V+RG +++G++ + CP KY + + E
Sbjct: 170 HPLGSYCSVKLNHENYLLWKNLVLPVIRGNRLEGFITGTRKCPPKYVPAIVSEEVSDEAQ 229
Query: 89 LNPAYEE----------------------------CKARINQLRNSLQNTKKGAMKMTKY 148
NP +EE K+ I + Q KKG MKM+ Y
Sbjct: 230 ENPEHEEWVVQDQILLGCETSKDLWDSIKDLFGIKTKSNIAYYKKEFQELKKGGMKMSDY 289
Query: 149 LAFMKQTSEDLKLAGEPVTLSYLSSCILTGLEA-EYLPILCTIEDKAD 166
L K+ ++L LAG PV L L S IL GL++ EY P++C I +K D
Sbjct: 290 LKMAKRLIDNLALAGRPVPLEDLVSQILNGLDSHEYNPLVCQINEKED 337
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022143579.1 | 1.0e-89 | 75.40 | ankyrin repeat-containing protein NPR4-like [Momordica charantia] | [more] |
| XP_022157748.1 | 5.4e-35 | 50.00 | uncharacterized protein LOC111024384 isoform X1 [Momordica charantia] | [more] |
| XP_022157750.1 | 5.4e-35 | 50.00 | uncharacterized protein LOC111024384 isoform X2 [Momordica charantia] | [more] |
| GAU21262.1 | 2.5e-16 | 32.62 | hypothetical protein TSUD_286720 [Trifolium subterraneum] | [more] |
| TXG47047.1 | 7.3e-16 | 34.52 | hypothetical protein EZV62_026341 [Acer yangbiense] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CPQ7 | 4.8e-90 | 75.40 | ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LO... | [more] |
| A0A6J1DU77 | 2.6e-35 | 50.00 | uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1DTZ7 | 2.6e-35 | 50.00 | uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
| A0A2Z6M732 | 1.2e-16 | 32.62 | Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ... | [more] |
| A0A5C7GRG7 | 3.5e-16 | 34.52 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026341 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
