Moc09g16450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g16450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Signal anchor, putative
Location	chr9: 13306850 .. 13307806 (-)
RNA-Seq Expression	Moc09g16450
Synteny	Moc09g16450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGGGCCCCCCCGGAAGGGGGCCTTCTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCAATTGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCAACGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGGTATTTTCTCTACCCCTTCTTACCCTGAAAAAGCAGGGGCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACCACTGCTCGCGCGGGTGCTTCCCTCTAA

mRNA sequence

ATGGCTCGGGCCCCCCCGGAAGGGGGCCTTCTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCAATTGGTCTTTCTGTCCAGGTGCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACCACTGCTCGCGCGGGTGCTTCCCTCTAA

Coding sequence (CDS)

ATGGCTCGGGCCCCCCCGGAAGGGGGCCTTCTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCAATTGGTCTTTCTGTCCAGGTGCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACCACTGCTCGCGCGGGTGCTTCCCTCTAA

Protein sequence

MARAPPEGGLLRPPPKLRRKGPKPIPGNSEASIGLSVQVQVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLARASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVTQADILASASSTTARAGASL

Homology

[Close]

BLAST of Moc09g16450 vs. NCBI nr
Match: XP_010104773.1 (uncharacterized protein LOC21401786 [Morus notabilis] >EXC01914.1 hypothetical protein L484_018826 [Morus notabilis])

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-52
Identity = 110/139 (79.14%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYG+GYFSAVAP    L 
Sbjct: 53  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGIGYFSAVAP---CLL 112

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
           R S   R   G+              FGLILGPDSPSVDEPC GTLRFSGHWILTNVCVT
Sbjct: 113 RPSGPTRGSTGIFTCCPSTT-----PFGLILGPDSPSVDEPCRGTLRFSGHWILTNVCVT 172

Query: 160 QADILASASSTTARAGASL 179
           QADILASASSTTARAGASL
Sbjct: 173 QADILASASSTTARAGASL 183

[Close]

BLAST of Moc09g16450 vs. NCBI nr
Match: KAF3449793.1 (hypothetical protein FNV43_RR05871 [Rhamnella rubrinervis])

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-46
Identity = 100/137 (72.99%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAP      
Sbjct: 203 QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAP------ 262

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
                                          GPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 263 -------------------------------GPDSPSVDEPCGGTLRFSGHWILTNVCVT 302

Query: 160 QADILASASSTTARAGA 177
           QADILASASSTTARAGA
Sbjct: 323 QADILASASSTTARAGA 302

[Close]

BLAST of Moc09g16450 vs. NCBI nr
Match: KAB5534301.1 (hypothetical protein DKX38_017387 [Salix brachista])

HSP 1 Score: 196.1 bits (497), Expect = 2.7e-46
Identity = 100/139 (71.94%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFS VAP      
Sbjct: 250 QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSVVAP------ 309

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
                                          GPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 310 -------------------------------GPDSPSVDEPCGGTLRFSGHWILTNVCVT 351

Query: 160 QADILASASSTTARAGASL 179
           QADILASASST ARAGASL
Sbjct: 370 QADILASASSTPARAGASL 351

[Close]

BLAST of Moc09g16450 vs. NCBI nr
Match: KAG9438446.1 (hypothetical protein H6P81_021616 [Aristolochia fimbriata])

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-41
Identity = 94/138 (68.12%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPY+VLRL GDLCFW             YGMGYFSAVAPGTRTLA
Sbjct: 327 QVTNFLDLPALGRRQPPYVVLRLRGDLCFW------SFELFLGYGMGYFSAVAPGTRTLA 386

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
           R          + ++           FGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 387 RGIFSTPSYPALKKQGIFTCCPSTTPFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 446

Query: 160 QADILASASSTTARAGAS 178
           QADILASASST ARA ++
Sbjct: 447 QADILASASSTPARAASA 458

[Close]

BLAST of Moc09g16450 vs. NCBI nr
Match: KAG6467715.1 (hypothetical protein ZIOFF_074353 [Zingiber officinale])

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-37
Identity = 92/160 (57.50%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MARAPPEGGLLRPPPKLRRKGPKPIPGNSEASIGLSVQV--------------------- 60
           MARAPPEGGLLR PPKLRRK PKPIPG S A IGLSVQV                     
Sbjct: 1   MARAPPEGGLLRLPPKLRRKSPKPIPGKSSAKIGLSVQVRVVRIFTDMSISPSLSPRQCP 60

Query: 61  ---------------------------------------QVTNFLDLPALGRRQPPYMVL 101
                                                  QVTNFLDLPALGRRQPPYMVL
Sbjct: 61  DRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDLPALGRRQPPYMVL 120

[Close]

BLAST of Moc09g16450 vs. ExPASy Swiss-Prot
Match: Q3BAI2 (Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0


Query: 40 QVTNFLDLPALGRRQPPYMVLRLCGDLCFW 70
          QVTNFLDLPALGRRQPPYMVLRLCGDLCFW
Sbjct: 62 QVTNFLDLPALGRRQPPYMVLRLCGDLCFW 91

[Close]

BLAST of Moc09g16450 vs. ExPASy TrEMBL
Match: W9S092 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018826 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 110/139 (79.14%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYG+GYFSAVAP    L 
Sbjct: 53  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGIGYFSAVAP---CLL 112

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
           R S   R   G+              FGLILGPDSPSVDEPC GTLRFSGHWILTNVCVT
Sbjct: 113 RPSGPTRGSTGIFTCCPSTT-----PFGLILGPDSPSVDEPCRGTLRFSGHWILTNVCVT 172

Query: 160 QADILASASSTTARAGASL 179
           QADILASASSTTARAGASL
Sbjct: 173 QADILASASSTTARAGASL 183

[Close]

BLAST of Moc09g16450 vs. ExPASy TrEMBL
Match: A0A5N5KVY8 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017387 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 100/139 (71.94%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFS VAP      
Sbjct: 250 QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSVVAP------ 309

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
                                          GPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 310 -------------------------------GPDSPSVDEPCGGTLRFSGHWILTNVCVT 351

Query: 160 QADILASASSTTARAGASL 179
           QADILASASST ARAGASL
Sbjct: 370 QADILASASSTPARAGASL 351

[Close]

BLAST of Moc09g16450 vs. ExPASy TrEMBL
Match: G7JVL6 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g006070 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 82/138 (59.42%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           QVTNFL+LPALGRRQPPYMVLRLCGDLCF                             L 
Sbjct: 270 QVTNFLNLPALGRRQPPYMVLRLCGDLCF----------------------------CLL 329

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
           R S   R   G+              FGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 330 RPSGPTRGSTGIFTCCPSTT-----PFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 374

Query: 160 QADILASASSTTARAGAS 178
           QADILASASS  ARAG S
Sbjct: 390 QADILASASSNPARAGTS 374

[Close]

BLAST of Moc09g16450 vs. ExPASy TrEMBL
Match: G7K1Z2 (Signal anchor, putative OS=Medicago truncatula OX=3880 GN=MTR_5g080940 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 81/138 (58.70%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 40  QVTNFLDLPALGRRQPPYMVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLA 99
           +VTNFL+LPALGRRQPPYMVLRLCGDLCF                             L 
Sbjct: 343 RVTNFLNLPALGRRQPPYMVLRLCGDLCF----------------------------CLL 402

Query: 100 RASSVPRDQQGVVQEYSPVVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 159
           R S   R   G+              FGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT
Sbjct: 403 RPSGPTRGSTGIFTCCPSTT-----PFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVT 447

Query: 160 QADILASASSTTARAGAS 178
           QADILASASS  ARAG S
Sbjct: 463 QADILASASSKPARAGTS 447

[Close]

BLAST of Moc09g16450 vs. ExPASy TrEMBL
Match: A0A2N9HVI7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43596 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.7e-27
Identity = 73/121 (60.33%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 58  MVLRLCGDLCFWYPFVEGRSSFSWEYGMGYFSAVAPGTRTLARASSVPRDQQGVVQEYSP 117
           + L  C    + YPFVEGRSSFSWEYGMGYFSAVAP                        
Sbjct: 286 LYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAP------------------------ 345

Query: 118 VVHRLRLSFGLILGPDSPSVDEPCGGTLRFSGHWILTNVCVTQADILASASSTTARAGAS 177
                        GPDSPSVDEPCGGTLRFSGHWILTNVCVTQADILASASSTTA AGAS
Sbjct: 346 -------------GPDSPSVDEPCGGTLRFSGHWILTNVCVTQADILASASSTTALAGAS 369

Query: 178 L 179
           L
Sbjct: 406 L 369

The following BLAST results are available for this feature:

BLAST of Moc09g16450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_010104773.1	3.2e-52	79.14	uncharacterized protein LOC21401786 [Morus notabilis] >EXC01914.1 hypothetical p...	[more]
KAF3449793.1	1.2e-46	72.99	hypothetical protein FNV43_RR05871 [Rhamnella rubrinervis]	[more]
KAB5534301.1	2.7e-46	71.94	hypothetical protein DKX38_017387 [Salix brachista]	[more]
KAG9438446.1	5.7e-41	68.12	hypothetical protein H6P81_021616 [Aristolochia fimbriata]	[more]
KAG6467715.1	2.9e-37	57.50	hypothetical protein ZIOFF_074353 [Zingiber officinale]	[more]

BLAST of Moc09g16450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3BAI2	1.3e-11	100.00	Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=3088...	[more]

BLAST of Moc09g16450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9S092	1.6e-52	79.14	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018826 PE=4 SV=1	[more]
A0A5N5KVY8	1.3e-46	71.94	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017387 PE=4 SV=1	[more]
G7JVL6	1.5e-31	59.42	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g006070 PE=4 SV=1	[more]
G7K1Z2	5.8e-31	58.70	Signal anchor, putative OS=Medicago truncatula OX=3880 GN=MTR_5g080940 PE=4 SV=1	[more]
A0A2N9HVI7	1.7e-27	60.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43596 PE=4 SV=1	[more]

BLAST of Moc09g16450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g16450.1	Moc09g16450.1	mRNA