Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTTAGAATCGTCGAAAAACACCTCTGAAATATCGATCACAAATCAGCATATTCAGGTTATTAATCCTGGTAACAAGATCTCTACAGTCAAATTGACTGATGATAATTTCTTGTTGTGGCGATTGCACGTTCTGACTGCTCAAGGCCATGGACTGGAGGACTTCATCGATCCTGAAGGTCCAATTCCATCGGAAAATATCACTGTTGAAGGAGAACGTTCATCTTCATCAACTTAGAATCAGGAATATCTAAATTGGAAGCGACAACATAAATTGATTACATTGTGGCTTCTTGGATCTATGTCTAAAGAAGTATTATCTCAAATGCTTGAGTGTGAAACCTCAAAAAGAGATTTGGTCTGTTCTGAATAGTCTCTTTTCATCGAGAAACCTAGCTCGTGTTATGGAGTTAAAATCGAAGCTTGAAAACCTAAAGAAAGGGAGCCTCAGTCTAAAGGAGTATTTTGCAAAGGCAAAGCAAATTGTTGATGCCCTAACTGCTGCTAGTAAACCAATTTCGAAGACTGATCATATAATGCATCTATTAGCCGGTCTAGGAACCGAATTCGATTCAACTGTGTCGGTAATTTCTGCGCGTGTTGATCCTCCAACAATTCAAGAAACGTATTCATTACTACTTGCTCAAGAAGGAAGGAACGAGAGGAATGCTATCAATACTGAGGTATCACTACCATCAGTGAATTTAACAACTCAAGAACAATCGAAGAAGGGACATCAAGCTAATTCTACAGATACTAGAGGAAATTGGAACAATAACAGAGGAAGAAGAGGCAATCGATCAAACCGTGGGCGAAATTGGAATAACAATTTCAGAATTCAGTGTCAACTTTGCGGTCGATTTGGCCATACTGCCTCGAGGTGTTATCAACGCTTTGATCGGAGTTTTCAGGGCCCTCATTCGTCGGCTTATTCGTTCGGATTTCATCCGACCCCTTCGTATGGTTCAGCATCAAATCCTAATCAACCTCAGATGAATGCTTTTACTCTTTCTCAGGAGCTCAATCGGGACACTAACTGGTATCCAGATTCTGGTGCTTCACATCACGTCACAAATGATCTTGGAAATTTGTCTATTGGAGCTGAAAGTCATGGCAATAACAGAGTTCTTGTAGGCAACGACTCAGGTTTGAACGTTTCACATATTGGATCTACCTTTCTTAAATCTTCTTCTGCCCCTTCTAATATCTTTTTGCTAAATAATCTGCTCCATGTTCCTCAAATTACCAAAAATCTCATTAGTGTTAGTAAATTTGCAAAAGATAATAATGTTTACTTTGAGTTTCATTCCTCTAATTGTTTTGTGAAGGACCTTCAAACTGGCCAAATTCTACTCCAGGGCACAGGGCAAAGTTTCTGATGGGCTGTACACATTCTCTTTGGACAAGGCTAAGTCTTCTACATCATTCCCTTCCACCATTCTTTCTCATGGCTCTTCTTCTTCAACCATCACTCTTCAGGTTCTTCATACATTAGCTTCTCCTGCTACTTCTTTTCCATGTGATACTGATTCTGCTGAACAATTTACACCTTTCACACAATGTAAGCCTTCTGTTTTAGATATATGGCACTGA
mRNA sequence
ATGACGTTAGAATCGTCGAAAAACACCTCTGAAATATCGATCACAAATCAGCATATTCAGGTTATTAATCCTGGTAACAAGATCTCTACAGTCAAATTGACTGATGATAATTTCTTGTTGTGGCGATTGCACGTTCTGACTGCTCAAGGCCATGGACTGGAGGACTTCATCGATCCTGAAGCTCGTGTTATGGAGTTAAAATCGAAGCTTGAAAACCTAAAGAAAGGGAGCCTCAGTCTAAAGGAGTATTTTGCAAAGGCAAAGCAAATTGTTGATGCCCTAACTGCTGCTAGTAAACCAATTTCGAAGACTGATCATATAATGCATCTATTAGCCGGTCTAGGAACCGAATTCGATTCAACTGTGTCGGTAATTTCTGCGCGTGTTGATCCTCCAACAATTCAAGAAACGTATTCATTACTACTTGCTCAAGAAGGAAGGAACGAGAGGAATGCTATCAATACTGAGGTATCACTACCATCAGTGAATTTAACAACTCAAGAACAATCGAAGAAGGGACATCAAGCTAATTCTACAGATACTAGAGGAAATTGGAACAATAACAGAGGAAGAAGAGGCAATCGATCAAACCGTGGGCGAAATTGGAATAACAATTTCAGAATTCAGTGTCAACTTTGCGGTCGATTTGGCCATACTGCCTCGAGGTGTTATCAACGCTTTGATCGGAGTTTTCAGGGCCCTCATTCGTCGGCTTATTCGTTCGGATTTCATCCGACCCCTTCGTATGGTTCAGCATCAAATCCTAATCAACCTCAGATGAATGCTTTTACTCTTTCTCAGGAGCTCAATCGGGACACTAACTGGTATCCAGATTCTGGTGCTTCACATCACGTCACAAATGATCTTGGAAATTTGTCTATTGGAGCTGAAAGTCATGGCAATAACAGAGTTCTTGTAGGCAACGACTCAGGTTTGAACGGCAAAGTTTCTGATGGGCTGTACACATTCTCTTTGGACAAGGCTAAGTCTTCTACATCATTCCCTTCCACCATTCTTTCTCATGGCTCTTCTTCTTCAACCATCACTCTTCAGGTTCTTCATACATTAGCTTCTCCTGCTACTTCTTTTCCATGTGATACTGATTCTGCTGAACAATTTACACCTTTCACACAATGTAAGCCTTCTGTTTTAGATATATGGCACTGA
Coding sequence (CDS)
ATGACGTTAGAATCGTCGAAAAACACCTCTGAAATATCGATCACAAATCAGCATATTCAGGTTATTAATCCTGGTAACAAGATCTCTACAGTCAAATTGACTGATGATAATTTCTTGTTGTGGCGATTGCACGTTCTGACTGCTCAAGGCCATGGACTGGAGGACTTCATCGATCCTGAAGCTCGTGTTATGGAGTTAAAATCGAAGCTTGAAAACCTAAAGAAAGGGAGCCTCAGTCTAAAGGAGTATTTTGCAAAGGCAAAGCAAATTGTTGATGCCCTAACTGCTGCTAGTAAACCAATTTCGAAGACTGATCATATAATGCATCTATTAGCCGGTCTAGGAACCGAATTCGATTCAACTGTGTCGGTAATTTCTGCGCGTGTTGATCCTCCAACAATTCAAGAAACGTATTCATTACTACTTGCTCAAGAAGGAAGGAACGAGAGGAATGCTATCAATACTGAGGTATCACTACCATCAGTGAATTTAACAACTCAAGAACAATCGAAGAAGGGACATCAAGCTAATTCTACAGATACTAGAGGAAATTGGAACAATAACAGAGGAAGAAGAGGCAATCGATCAAACCGTGGGCGAAATTGGAATAACAATTTCAGAATTCAGTGTCAACTTTGCGGTCGATTTGGCCATACTGCCTCGAGGTGTTATCAACGCTTTGATCGGAGTTTTCAGGGCCCTCATTCGTCGGCTTATTCGTTCGGATTTCATCCGACCCCTTCGTATGGTTCAGCATCAAATCCTAATCAACCTCAGATGAATGCTTTTACTCTTTCTCAGGAGCTCAATCGGGACACTAACTGGTATCCAGATTCTGGTGCTTCACATCACGTCACAAATGATCTTGGAAATTTGTCTATTGGAGCTGAAAGTCATGGCAATAACAGAGTTCTTGTAGGCAACGACTCAGGTTTGAACGGCAAAGTTTCTGATGGGCTGTACACATTCTCTTTGGACAAGGCTAAGTCTTCTACATCATTCCCTTCCACCATTCTTTCTCATGGCTCTTCTTCTTCAACCATCACTCTTCAGGTTCTTCATACATTAGCTTCTCCTGCTACTTCTTTTCCATGTGATACTGATTCTGCTGAACAATTTACACCTTTCACACAATGTAAGCCTTCTGTTTTAGATATATGGCACTGA
Protein sequence
MTLESSKNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTAQGHGLEDFIDPEARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSKKGHQANSTDTRGNWNNNRGRRGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHVTNDLGNLSIGAESHGNNRVLVGNDSGLNGKVSDGLYTFSLDKAKSSTSFPSTILSHGSSSSTITLQVLHTLASPATSFPCDTDSAEQFTPFTQCKPSVLDIWH
Homology
BLAST of Moc09g14400 vs. NCBI nr
Match:
XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])
HSP 1 Score: 260.4 bits (664), Expect = 2.5e-65
Identity = 169/405 (41.73%), Postives = 222/405 (54.81%), Query Frame = 0
Query: 5 SSKNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE--- 64
SS S+ + Q + INPG+K+S V+L DDN LLW+ + TA QG+GLE +ID
Sbjct: 5 SSIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYIDSNEDT 64
Query: 65 ------------------------------------------------------------ 124
Sbjct: 65 PAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNEDILSQMLDCKSAREIWT 124
Query: 125 -----------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMH 184
ARVM+LK KLEN KKG+LSLK+YF K K +VD+L A K +S DHIMH
Sbjct: 125 VLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDSLAIAGKKLSTEDHIMH 184
Query: 185 LLAGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQ 244
+LAGLG EFD+ +SVI+AR P T+QE SLLL QEGRNERN IN++ SLPSVNLT +
Sbjct: 185 ILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNLINSDGSLPSVNLTLNDS 244
Query: 245 SKKG--HQANSTDTRGNWNNNRGR-RGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQR 304
SKK HQ+ + + + RGR NRS+ RNW N + QCQ+CGRFGHTA RCY R
Sbjct: 245 SKKNNLHQSKCFNPHQSNYSQRGRGTNNRSSNRRNWTGNNKPQCQICGRFGHTALRCYMR 304
Query: 305 FDRSFQGPHSSAYSF---GFHP-----TPSYGSASNP------------NQPQMNAFTLS 312
F+R+F GP+ + +F GF TPS+ + S+P + QM A ++
Sbjct: 305 FERNFLGPNMNPNTFSPAGFSSGFPLNTPSHNAFSSPATQNGNFSMNSASPSQMQALMVA 364
BLAST of Moc09g14400 vs. NCBI nr
Match:
XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia])
HSP 1 Score: 235.0 bits (598), Expect = 1.1e-57
Identity = 137/270 (50.74%), Postives = 180/270 (66.67%), Query Frame = 0
Query: 61 ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDS 120
ARVM+LKSKLEN+KKG+L LK+YF K K +VD+L AA K ++ DHIMH+L GL +EF+S
Sbjct: 46 ARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFES 105
Query: 121 TVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSKKGHQANSTD 180
TVSVISAR T+QE YSLLL+ EGRNERN+INT+ +LPSVNLT +Q+K + A S D
Sbjct: 106 TVSVISARTQTQTLQEVYSLLLSHEGRNERNSINTDGTLPSVNLT--QQTKNSNSAQSID 165
Query: 181 -TRGNWNNNRGRRGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSA- 240
R NNR + N RNWN+N R QCQ+ G+FGHTA RCY RF+++F GP+ +
Sbjct: 166 GQRPYMQNNRSKNSGNPNFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSH 225
Query: 241 ----YSFGFHPTPSYGSASNPNQPQ-------------MNAFTLSQELNRDTNWYPDSGA 300
+S G + + + + NQ Q M AF Q+ NRDTNWYPDSGA
Sbjct: 226 MQHKFSGGSNSSINSNMTAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGA 285
Query: 301 SHHVTNDLGNLSIGAESHGNNRVLVGNDSG 312
++HVT++ NL+ E G+N+V +GN +G
Sbjct: 286 TNHVTSNFNNLATSTEYTGDNQVRIGNGTG 313
BLAST of Moc09g14400 vs. NCBI nr
Match:
XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia])
HSP 1 Score: 233.0 bits (593), Expect = 4.3e-57
Identity = 136/267 (50.94%), Postives = 178/267 (66.67%), Query Frame = 0
Query: 61 ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDS 120
ARVM+LKSKLEN+KKG+L LK+YF K K +VD+L AA K ++ DHIMH+L GL +EF+S
Sbjct: 46 ARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFES 105
Query: 121 TVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSKKGHQANSTD 180
TVSVISAR T+QE YSLLL+ EGRNERN+INT+ +LPSVNLT +Q+K + A S D
Sbjct: 106 TVSVISARTQTQTLQEVYSLLLSHEGRNERNSINTDGTLPSVNLT--QQTKNSNSAQSID 165
Query: 181 -TRGNWNNNRGRRGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSA- 240
R NNR + N RNWN+N R QCQ+ G+FGHTA RCY RF+++F GP+ +
Sbjct: 166 GQRPYMQNNRSKNSGNPNFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSH 225
Query: 241 ----YSFGFHPTPSYGSASNPNQPQ-------------MNAFTLSQELNRDTNWYPDSGA 300
+S G + + + + NQ Q M AF Q+ NRDTNWYPDSGA
Sbjct: 226 MQHKFSGGSNSSINSNMTAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGA 285
Query: 301 SHHVTNDLGNLSIGAESHGNNRVLVGN 309
++HVT++ NL+ E G+N+V +GN
Sbjct: 286 TNHVTSNFNNLATSTEYTGDNQVRIGN 310
BLAST of Moc09g14400 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 218.0 bits (554), Expect = 1.4e-52
Identity = 152/387 (39.28%), Postives = 210/387 (54.26%), Query Frame = 0
Query: 7 KNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE----- 66
+NT S N Q+ GNKIS VKL DD FLLW+ +LTA + + LE+F++ E
Sbjct: 11 ENTEASSPIN---QIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESESEPPS 70
Query: 67 ------------------------------------------------------------ 126
Sbjct: 71 KYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETL 130
Query: 127 ---------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLL 186
A+ M+ K+KL N+KKGS+ LKEYF K Q VDAL + +KP+S DHI+++L
Sbjct: 131 QGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYIL 190
Query: 187 AGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSK 246
AGLG+++ S +SVISAR D P++QE SLLL QE +NE I +E +LPSVN+ TQ ++
Sbjct: 191 AGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLI-SETALPSVNIVTQ-TTE 250
Query: 247 KGHQANSTDTRGNWNNN-----RGRRGN-RSNRGRNWNNNFRIQCQLCGRFGHTASRCYQ 306
KG ++ + N++NN RG RGN RSNRGR N N + QCQ+C + G++A RC+
Sbjct: 251 KGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN-KPQCQICAKLGYSADRCFF 310
Query: 307 RFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHV 313
R+ +SS YS H T SY + + N PQM+A + +LN D+NWYPDSGA++H+
Sbjct: 311 RYT---PRSNSSGYSPNSHNT-SYTNMN--NHPQMSAMVAALDLNIDSNWYPDSGATNHL 370
BLAST of Moc09g14400 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 218.0 bits (554), Expect = 1.4e-52
Identity = 152/387 (39.28%), Postives = 210/387 (54.26%), Query Frame = 0
Query: 7 KNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE----- 66
+NT S N Q+ GNKIS VKL DD FLLW+ +LTA + + LE+F++ E
Sbjct: 11 ENTEASSPIN---QIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESESEPPS 70
Query: 67 ------------------------------------------------------------ 126
Sbjct: 71 KYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETL 130
Query: 127 ---------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLL 186
A+ M+ K+KL N+KKGS+ LKEYF K Q VDAL + +KP+S DHI+++L
Sbjct: 131 QGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYIL 190
Query: 187 AGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSK 246
AGLG+++ S +SVISAR D P++QE SLLL QE +NE I +E +LPSVN+ TQ ++
Sbjct: 191 AGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLI-SETALPSVNIVTQ-TTE 250
Query: 247 KGHQANSTDTRGNWNNN-----RGRRGN-RSNRGRNWNNNFRIQCQLCGRFGHTASRCYQ 306
KG ++ + N++NN RG RGN RSNRGR N N + QCQ+C + G++A RC+
Sbjct: 251 KGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN-KPQCQICAKLGYSADRCFF 310
Query: 307 RFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHV 313
R+ +SS YS H T SY + + N PQM+A + +LN D+NWYPDSGA++H+
Sbjct: 311 RYT---PRSNSSGYSPNSHNT-SYTNMN--NHPQMSAMVAALDLNIDSNWYPDSGATNHL 370
BLAST of Moc09g14400 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 3.3e-12
Identity = 73/257 (28.40%), Postives = 122/257 (47.47%), Query Frame = 0
Query: 63 VMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDSTV 122
V +L+++L+ KG+ ++ +Y D L KP+ + + +L L E+ +
Sbjct: 125 VTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVI 184
Query: 123 SVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSV-------NLTTQEQSKKGHQ 182
I+A+ PPT+ E + LL E ++ A+++ +P N TT + G++
Sbjct: 185 DQIAAKDTPPTLTEIHERLLNHE--SKILAVSSATVIPITANAVSHRNTTTTNNNNNGNR 244
Query: 183 ANSTDTRGNWNNNRGRRGNRSNRGRNWNNN--FRIQCQLCGRFGHTASRCYQRFDRSFQG 242
N D R N NN++ + + +N N N + + +CQ+CG GH+A RC Q + F
Sbjct: 245 NNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQL--QHFLS 304
Query: 243 PHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHVTNDLGNLS 302
+S P+P P QP+ N S NW DSGA+HH+T+D NLS
Sbjct: 305 SVNSQQP----PSP-----FTPWQPRANLALGSP--YSSNNWLLDSGATHHITSDFNNLS 364
Query: 303 IGAESHGNNRVLVGNDS 311
+ G + V+V + S
Sbjct: 365 LHQPYTGGDDVMVADGS 366
BLAST of Moc09g14400 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.2e-08
Identity = 61/226 (26.99%), Postives = 104/226 (46.02%), Query Frame = 0
Query: 92 DALTAASKPISKTDHIMHLLAGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERN 151
D L KP+ + + +L L ++ + I+A+ PP++ E + L+ +E ++
Sbjct: 135 DQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRE--SKLL 194
Query: 152 AINTEVSLP-SVNLTTQEQSKKGHQANSTDTRGNWNNNRGRRGN--RSNRGRNWNNN--- 211
A+N+ +P + N+ T + N+ N+NNN R + S+ G +N
Sbjct: 195 ALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPK 254
Query: 212 -FRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFT 271
+ +CQ+C GH+A RC Q FQ + S S P QP+ N
Sbjct: 255 PYLGRCQICSVQGHSAKRCPQL--HQFQSTTNQQQS---------TSPFTPWQPRAN-LA 314
Query: 272 LSQELNRDTNWYPDSGASHHVTNDLGNLSIGAESHGNNRVLVGNDS 311
++ N + NW DSGA+HH+T+D NLS G + V++ + S
Sbjct: 315 VNSPYNAN-NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGS 345
BLAST of Moc09g14400 vs. ExPASy TrEMBL
Match:
A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 169/405 (41.73%), Postives = 222/405 (54.81%), Query Frame = 0
Query: 5 SSKNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE--- 64
SS S+ + Q + INPG+K+S V+L DDN LLW+ + TA QG+GLE +ID
Sbjct: 5 SSIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYIDSNEDT 64
Query: 65 ------------------------------------------------------------ 124
Sbjct: 65 PAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNEDILSQMLDCKSAREIWT 124
Query: 125 -----------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMH 184
ARVM+LK KLEN KKG+LSLK+YF K K +VD+L A K +S DHIMH
Sbjct: 125 VLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDSLAIAGKKLSTEDHIMH 184
Query: 185 LLAGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQ 244
+LAGLG EFD+ +SVI+AR P T+QE SLLL QEGRNERN IN++ SLPSVNLT +
Sbjct: 185 ILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNLINSDGSLPSVNLTLNDS 244
Query: 245 SKKG--HQANSTDTRGNWNNNRGR-RGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQR 304
SKK HQ+ + + + RGR NRS+ RNW N + QCQ+CGRFGHTA RCY R
Sbjct: 245 SKKNNLHQSKCFNPHQSNYSQRGRGTNNRSSNRRNWTGNNKPQCQICGRFGHTALRCYMR 304
Query: 305 FDRSFQGPHSSAYSF---GFHP-----TPSYGSASNP------------NQPQMNAFTLS 312
F+R+F GP+ + +F GF TPS+ + S+P + QM A ++
Sbjct: 305 FERNFLGPNMNPNTFSPAGFSSGFPLNTPSHNAFSSPATQNGNFSMNSASPSQMQALMVA 364
BLAST of Moc09g14400 vs. ExPASy TrEMBL
Match:
A0A6J1C6N9 (dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58
Identity = 137/270 (50.74%), Postives = 180/270 (66.67%), Query Frame = 0
Query: 61 ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDS 120
ARVM+LKSKLEN+KKG+L LK+YF K K +VD+L AA K ++ DHIMH+L GL +EF+S
Sbjct: 46 ARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFES 105
Query: 121 TVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSKKGHQANSTD 180
TVSVISAR T+QE YSLLL+ EGRNERN+INT+ +LPSVNLT +Q+K + A S D
Sbjct: 106 TVSVISARTQTQTLQEVYSLLLSHEGRNERNSINTDGTLPSVNLT--QQTKNSNSAQSID 165
Query: 181 -TRGNWNNNRGRRGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSA- 240
R NNR + N RNWN+N R QCQ+ G+FGHTA RCY RF+++F GP+ +
Sbjct: 166 GQRPYMQNNRSKNSGNPNFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSH 225
Query: 241 ----YSFGFHPTPSYGSASNPNQPQ-------------MNAFTLSQELNRDTNWYPDSGA 300
+S G + + + + NQ Q M AF Q+ NRDTNWYPDSGA
Sbjct: 226 MQHKFSGGSNSSINSNMTAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGA 285
Query: 301 SHHVTNDLGNLSIGAESHGNNRVLVGNDSG 312
++HVT++ NL+ E G+N+V +GN +G
Sbjct: 286 TNHVTSNFNNLATSTEYTGDNQVRIGNGTG 313
BLAST of Moc09g14400 vs. ExPASy TrEMBL
Match:
A0A6J1C8R2 (dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 2.1e-57
Identity = 136/267 (50.94%), Postives = 178/267 (66.67%), Query Frame = 0
Query: 61 ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFDS 120
ARVM+LKSKLEN+KKG+L LK+YF K K +VD+L AA K ++ DHIMH+L GL +EF+S
Sbjct: 46 ARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFES 105
Query: 121 TVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSKKGHQANSTD 180
TVSVISAR T+QE YSLLL+ EGRNERN+INT+ +LPSVNLT +Q+K + A S D
Sbjct: 106 TVSVISARTQTQTLQEVYSLLLSHEGRNERNSINTDGTLPSVNLT--QQTKNSNSAQSID 165
Query: 181 -TRGNWNNNRGRRGNRSNRGRNWNNNFRIQCQLCGRFGHTASRCYQRFDRSFQGPHSSA- 240
R NNR + N RNWN+N R QCQ+ G+FGHTA RCY RF+++F GP+ +
Sbjct: 166 GQRPYMQNNRSKNSGNPNFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSH 225
Query: 241 ----YSFGFHPTPSYGSASNPNQPQ-------------MNAFTLSQELNRDTNWYPDSGA 300
+S G + + + + NQ Q M AF Q+ NRDTNWYPDSGA
Sbjct: 226 MQHKFSGGSNSSINSNMTAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGA 285
Query: 301 SHHVTNDLGNLSIGAESHGNNRVLVGN 309
++HVT++ NL+ E G+N+V +GN
Sbjct: 286 TNHVTSNFNNLATSTEYTGDNQVRIGN 310
BLAST of Moc09g14400 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 6.9e-53
Identity = 152/387 (39.28%), Postives = 210/387 (54.26%), Query Frame = 0
Query: 7 KNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE----- 66
+NT S N Q+ GNKIS VKL DD FLLW+ +LTA + + LE+F++ E
Sbjct: 11 ENTEASSPIN---QIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESESEPPS 70
Query: 67 ------------------------------------------------------------ 126
Sbjct: 71 KYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETL 130
Query: 127 ---------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLL 186
A+ M+ K+KL N+KKGS+ LKEYF K Q VDAL + +KP+S DHI+++L
Sbjct: 131 QGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYIL 190
Query: 187 AGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSK 246
AGLG+++ S +SVISAR D P++QE SLLL QE +NE I +E +LPSVN+ TQ ++
Sbjct: 191 AGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLI-SETALPSVNIVTQ-TTE 250
Query: 247 KGHQANSTDTRGNWNNN-----RGRRGN-RSNRGRNWNNNFRIQCQLCGRFGHTASRCYQ 306
KG ++ + N++NN RG RGN RSNRGR N N + QCQ+C + G++A RC+
Sbjct: 251 KGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN-KPQCQICAKLGYSADRCFF 310
Query: 307 RFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHV 313
R+ +SS YS H T SY + + N PQM+A + +LN D+NWYPDSGA++H+
Sbjct: 311 RYT---PRSNSSGYSPNSHNT-SYTNMN--NHPQMSAMVAALDLNIDSNWYPDSGATNHL 370
BLAST of Moc09g14400 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 6.9e-53
Identity = 152/387 (39.28%), Postives = 210/387 (54.26%), Query Frame = 0
Query: 7 KNTSEISITNQHIQVINPGNKISTVKLTDDNFLLWRLHVLTA-QGHGLEDFIDPE----- 66
+NT S N Q+ GNKIS VKL DD FLLW+ +LTA + + LE+F++ E
Sbjct: 11 ENTEASSPIN---QIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLESESEPPS 70
Query: 67 ------------------------------------------------------------ 126
Sbjct: 71 KYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSAKEIWETL 130
Query: 127 ---------ARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLL 186
A+ M+ K+KL N+KKGS+ LKEYF K Q VDAL + +KP+S DHI+++L
Sbjct: 131 QGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSDDHILYIL 190
Query: 187 AGLGTEFDSTVSVISARVDPPTIQETYSLLLAQEGRNERNAINTEVSLPSVNLTTQEQSK 246
AGLG+++ S +SVISAR D P++QE SLLL QE +NE I +E +LPSVN+ TQ ++
Sbjct: 191 AGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLI-SETALPSVNIVTQ-TTE 250
Query: 247 KGHQANSTDTRGNWNNN-----RGRRGN-RSNRGRNWNNNFRIQCQLCGRFGHTASRCYQ 306
KG ++ + N++NN RG RGN RSNRGR N N + QCQ+C + G++A RC+
Sbjct: 251 KGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRN-KPQCQICAKLGYSADRCFF 310
Query: 307 RFDRSFQGPHSSAYSFGFHPTPSYGSASNPNQPQMNAFTLSQELNRDTNWYPDSGASHHV 313
R+ +SS YS H T SY + + N PQM+A + +LN D+NWYPDSGA++H+
Sbjct: 311 RYT---PRSNSSGYSPNSHNT-SYTNMN--NHPQMSAMVAALDLNIDSNWYPDSGATNHL 370
BLAST of Moc09g14400 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 48.5 bits (114), Expect = 1.4e-05
Identity = 43/146 (29.45%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 60 EARVMELKSKLENLKKGSLSLKEYFAKAKQIVDALTAASKPISKTDHIMHLLAGLGTEFD 119
+AR + L S+L G + + +Y+ K K++ D+L P++ + +M++L GL +FD
Sbjct: 111 DARALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFD 170
Query: 120 STVSVISARVDPPTIQETYSLLLAQEGRNER----NAINTEVSLPSVNLTTQEQSKKGHQ 179
+ ++VI R P+ + ++L +E R +R N + + S S L E
Sbjct: 171 NIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPP---V 230
Query: 180 ANSTDTRGNWNNNRGR-RGNRSNRGR 201
N + GN RGR RGN RGR
Sbjct: 231 TNFQRSGGNQMGYRGRGRGNNIFRGR 253
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154487.1 | 2.5e-65 | 41.73 | uncharacterized protein LOC111021757 [Momordica charantia] | [more] |
XP_022136882.1 | 1.1e-57 | 50.74 | dr1-associated corepressor homolog isoform X1 [Momordica charantia] | [more] |
XP_022136883.1 | 4.3e-57 | 50.94 | dr1-associated corepressor homolog isoform X2 [Momordica charantia] | [more] |
KAA0048297.1 | 1.4e-52 | 39.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 1.4e-52 | 39.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 3.3e-12 | 28.40 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.2e-08 | 26.99 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DLT9 | 1.2e-65 | 41.73 | uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A6J1C6N9 | 5.4e-58 | 50.74 | dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1C8R2 | 2.1e-57 | 50.94 | dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A5A7U233 | 6.9e-53 | 39.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 6.9e-53 | 39.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
AT1G34070.1 | 1.4e-05 | 29.45 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |