Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCAAGGTCGGCGGATGTCACAGATGATAAGTGGAATAAGATGGAGGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGGGAAGAAAACTACGAATGAGATTTGGGATCATCTCGAAAAGTTGTACGAGACCAGATCACTTCACAACAAGATTTTCCTTAAGAGGATATTGTATACTCTTCGGATGTCAGAATCTACTCCAATGACGGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGGTTGTAAAATAGAGCCAAATGAATGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTCGTCATCAACTTGACAAATAATGTTCTCACCGACTATTTAAACTTTGAAGATATTGGAGCTACTGTCCTGGAAGAGGAAAATCGGCGTAGAAACAAAGTAGATAAGTTGGCGAGTTCGCAACAAGCAGAGGCTCTAGTGGTGACAAGAGGTAGATCAACGGAACTTGGCTCAAATGGGAGCCAAAATCAAGGAAAGGGCAAAATTAAGAAGTAAGAAGAACATAAAGTGCTACCATTGTGGCAAAAAGGAACATCTGAAGAAGGATTGTTGGAGTCTAAATAAGAAAGATTTCAATCCTCAAAGAAATGTAGCAAGCACTTCAAATGAAGGTGATATCTTGTGTTGTGATGCAGCGACAACGGTTGGAGGCAGAAATAGTTTAGCTGACGTGTGGTTCATCGACTTATGAGCCATTTATCACATGACCTCTCAACGAGAATGGTTCCATCATTATGAACCTGTCTTTGGACAATTTGTGTTTAGCTGTGACGATCACGCCTTGAAGATTGTCAGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAAAAAGTGCAACATGTAGAAGGTCTGACAAAGAACTTCCTCTCGGTAGGTCAACTAGATAACCTTGATTGCAAGGTGATTGGGGAGAAAAGTATTATAAAGGTGATGTGA
mRNA sequence
ATGAAGGTTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCAAGGTCGGCGGATGTCACAGATGATAAGTGGAATAAGATGGAGGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGGGAAGAAAACTACGAATGAGATTTGGGATCATCTCGAAAAGTTGTACGAGACCAGATCACTTCACAACAAGATTTTCCTTAAGAGGATATTGTATACTCTTCGGATGTCAGAATCTACTCCAATGACGGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGGTTGTAAAATAGAGCCAAATGAATGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTCGTCATCAACTTGACAAATAATGTTCTCACCGACTATTTAAACTTTGAAGATATTGGAGCTACTGTCCTGGAAGAGGAAAATCGGCGTAGAAACAAAGTAGATAAGTTGGCGAGTTCGCAACAAGCAGAGGCTCTAGTGGTGACAAGAGGTAGATCAACGGAACTTGGCTCAAATGGGAGCCAAAATCAAGGAAAGGGCAAAATTAAGAACTGTGACGATCACGCCTTGAAGATTGTCAGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAAAAAGTGCAACATGTAGAAGGTCTGACAAAGAACTTCCTCTCGGTAGGTCAACTAGATAACCTTGATTGCAAGGTGATTGGGGAGAAAAGTATTATAAAGGTGATGTGA
Coding sequence (CDS)
ATGAAGGTTATCTTGAGAAAAGATAATTGCCTTGCAGCCATCAGTGCAAGGTCGGCGGATGTCACAGATGATAAGTGGAATAAGATGGAGGGGAATGCTGTTGCAAATCTTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGGGAAGAAAACTACGAATGAGATTTGGGATCATCTCGAAAAGTTGTACGAGACCAGATCACTTCACAACAAGATTTTCCTTAAGAGGATATTGTATACTCTTCGGATGTCAGAATCTACTCCAATGACGGAGCACATCAACACGTTGAATACTCTATTTTCTCAACTCACATCATTGGGTTGTAAAATAGAGCCAAATGAATGTGCTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTCGTCATCAACTTGACAAATAATGTTCTCACCGACTATTTAAACTTTGAAGATATTGGAGCTACTGTCCTGGAAGAGGAAAATCGGCGTAGAAACAAAGTAGATAAGTTGGCGAGTTCGCAACAAGCAGAGGCTCTAGTGGTGACAAGAGGTAGATCAACGGAACTTGGCTCAAATGGGAGCCAAAATCAAGGAAAGGGCAAAATTAAGAACTGTGACGATCACGCCTTGAAGATTGTCAGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAAAAAGTGCAACATGTAGAAGGTCTGACAAAGAACTTCCTCTCGGTAGGTCAACTAGATAACCTTGATTGCAAGGTGATTGGGGAGAAAAGTATTATAAAGGTGATGTGA
Protein sequence
MKVILRKDNCLAAISARSADVTDDKWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIWDHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECAELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALVVTRGRSTELGSNGSQNQGKGKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVEGLTKNFLSVGQLDNLDCKVIGEKSIIKVM
Homology
BLAST of Moc09g13150 vs. NCBI nr
Match:
KAA0026163.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa])
HSP 1 Score: 328.2 bits (840), Expect = 6.7e-86
Identity = 187/329 (56.84%), Postives = 217/329 (65.96%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MKV+LR DNCL AI A++TDD KWN+M+GNA+ N+HLALAD VLSSI+ KK EIW
Sbjct: 22 MKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIHLALADNVLSSIKEKKIAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KLYET+SLHNKIFLKR LYTLRMSEST MTEH+NTLNTLFSQL LG KIEPNE A
Sbjct: 82 DHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNTLNTLFSQLALLGYKIEPNERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSL DSYDQLVINL NN+L DYL+F+D+ + VLEEENRR+NK DKL + QQAEAL
Sbjct: 142 ELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEEENRRKNKEDKLITLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQ-------------------------------GK---------- 240
VTRGR EL + + Q GK
Sbjct: 202 VTRGRPLELAAKIKEGQSHEKDSNPQGNVASTINEGGALSCEAVTTTEGKKRMADGWFFD 261
Query: 241 ----------------------GKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVE 266
G + +C+DHALKIV IGTIKLK HDN V TIQ+V+HVE
Sbjct: 262 SGATYHMTSRREWFHNYKPISGGSLFSCNDHALKIVDIGTIKLKLHDNIVCTIQQVRHVE 321
BLAST of Moc09g13150 vs. NCBI nr
Match:
GEW42722.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium])
HSP 1 Score: 325.5 bits (833), Expect = 4.3e-85
Identity = 177/297 (59.60%), Postives = 213/297 (71.72%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDDKWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIWD 60
MK ILRKD CLAAI R ADVTDDKW +M+GNA++NLHLALAD VLSSIE K+T EI D
Sbjct: 22 MKAILRKDKCLAAIGERPADVTDDKWEEMDGNAISNLHLALADGVLSSIEEKRTAKEICD 81
Query: 61 HLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECAE 120
HL +LYETRSLHNKIFLKR LY LRM+EST +T+H+N LNTLFSQL SL C IEP E A+
Sbjct: 82 HLARLYETRSLHNKIFLKRKLYALRMTESTSVTKHVNNLNTLFSQLASLRCIIEPQERAK 141
Query: 121 LLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALVV 180
+LLQSLPDSYDQL+I+LT NVLTD+L F+D+ A VLEE NRR N+ D+ ASS+Q EAL V
Sbjct: 142 ILLQSLPDSYDQLIISLTGNVLTDFLVFDDVAAAVLEEGNRRNNREDRQASSRQVEALAV 201
Query: 181 TRGRSTELGSNG-----SQNQGKGKIKN---------------------------CDDHA 240
TR RS E GS+G + Q + +I N C+DH
Sbjct: 202 TRERSIEPGSSGVITVVNLKQERRRILNASNVASKVILRKIVERLQMKAGRDLQICNDHE 261
Query: 241 LKIVSIGTIKLKFHDNTVRTIQKVQHVEGLTKNFLSVGQLDNLDCKVIGEKSIIKVM 266
LKI+ IG++ +K HD TVRTIQ V+HVEGL KN LS+GQLD+L CKV + I+K++
Sbjct: 262 LKIIGIGSVMVKMHDGTVRTIQDVRHVEGLKKNLLSLGQLDDLGCKVKIQNKIMKII 318
BLAST of Moc09g13150 vs. NCBI nr
Match:
KAA0061179.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa])
HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 176/291 (60.48%), Postives = 199/291 (68.38%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MKV+LRKDNCL + R A++ DD KWN+M+GNA AN+HLALAD VLSSIE KKT EIW
Sbjct: 22 MKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIHLALADNVLSSIEEKKTAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KLY+ +SLHNKIFLKR LYTLRMSEST MTEH+N LNTLFSQLT L KIEPNE A
Sbjct: 82 DHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNILNTLFSQLTLLAYKIEPNERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ + VLEEENRR+NK DKL SSQQAEALV
Sbjct: 142 ELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEEENRRKNKEDKLVSSQQAEALV 201
Query: 181 VTRGRSTELGSNGSQNQGK----------------------------------------- 231
VTRGRS+E S+GS+NQG+
Sbjct: 202 VTRGRSSECNSSGSKNQGRSKSRRNVASTINEGGALSCEAVTTMEGKKRMADGWFFDLGA 261
BLAST of Moc09g13150 vs. NCBI nr
Match:
KAE8713996.1 (hypothetical protein F3Y22_tig00110202pilonHSYRG00134 [Hibiscus syriacus])
HSP 1 Score: 316.6 bits (810), Expect = 2.0e-82
Identity = 168/265 (63.40%), Postives = 201/265 (75.85%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MK ILRKD CLA I+ D DD KWN+M+GNA+AN +LALAD+VLSSIE KKT EIW
Sbjct: 22 MKAILRKDGCLAVINEMPMDFADDNKWNEMDGNAMANFNLALADEVLSSIEEKKTAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KL+E SLHNKIFLKR LYTLRMSEST +T+H+NTLNTLFSQLTSL CKI E A
Sbjct: 82 DHLTKLHEATSLHNKIFLKRKLYTLRMSESTSVTDHLNTLNTLFSQLTSLSCKIVEQERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQL+INLTNN +T L F+D+ VL+EENR +NK D+ + QQAEAL
Sbjct: 142 ELLLQSLPDSYDQLIINLTNNNVTS-LVFDDVAVVVLQEENRHKNKEDRQVNLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQGKGKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVEGLT 240
RGRSTE G + S G G + +C+DHAL+IV +GTIKLK +D T++ ++ V+H++GL
Sbjct: 202 TMRGRSTERGQSSSHKHG-GSVYSCNDHALEIVGVGTIKLKMYDGTIKVVRDVRHLKGLK 261
Query: 241 KNFLSVGQLDNLDCKVIGEKSIIKV 265
KN LS G LDN K+ K IIKV
Sbjct: 262 KNLLSYGLLDNNASKIETRKGIIKV 284
BLAST of Moc09g13150 vs. NCBI nr
Match:
GEX02811.1 (hypothetical protein [Tanacetum cinerariifolium])
HSP 1 Score: 314.3 bits (804), Expect = 1.0e-81
Identity = 174/321 (54.21%), Postives = 208/321 (64.80%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MK ILRKD CLAAI R A+V DD KW++M+ NA ANLHLA+AD VLSSIE KK+ EIW
Sbjct: 59 MKAILRKDKCLAAIGERPAEVMDDSKWDEMDRNAFANLHLAVADGVLSSIEEKKSAKEIW 118
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL +LYE RSLHNK FLKR +Y LRM+EST +TEH+N LNTL+SQLTSL CKI+ E A
Sbjct: 119 DHLARLYEARSLHNKFFLKRKIYALRMTESTSVTEHVNNLNTLYSQLTSLSCKIDSQERA 178
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
E+LLQSLPDSYDQ++INLTNNVL+DYL F+D+ A +LEEENRR N+ D+ SS+Q EALV
Sbjct: 179 EILLQSLPDSYDQVIINLTNNVLSDYLVFDDVAAAILEEENRRNNREDRQTSSRQVEALV 238
Query: 181 VTRGRSTELGSNGSQNQGK----------------------------------------- 240
VTRGR G N QG
Sbjct: 239 VTRGRKDCQGLNTYNTQGNIASTSEDGNALCCEAAIANENMKKFADVWLFDTGATFYMSA 298
Query: 241 --------------GKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVEGLTKNFLS 266
G I +C+DH LKI+ IG+I +K HD TV TIQ V+HVEGL KN LS
Sbjct: 299 RKEWFHQYKPISGGGSIYSCNDHELKIIGIGSIMVKMHDGTVHTIQDVRHVEGLKKNLLS 358
BLAST of Moc09g13150 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 67/191 (35.08%), Postives = 103/191 (53.93%), Query Frame = 0
Query: 24 DKWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIWDHLEKLYETRSLHNKIFLKRILYT 83
+ W ++ A + + L L+D V+++I + T IW LE LY +++L NK++LK+ LY
Sbjct: 50 EDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYA 109
Query: 84 LRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECAELLLQSLPDSYDQLVINLTNNVLT 143
L MSE T H+N N L +QL +LG KIE + A LLL SLP SYD L + + T
Sbjct: 110 LHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT 169
Query: 144 DYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALVVT-RGRSTELGSNG---------S 203
+ +D+ + +L E R+ Q +AL+ RGRS + SN S
Sbjct: 170 --IELKDVTSALLLNEKMRKK------PENQGQALITEGRGRSYQRSSNNYGRSGARGKS 229
Query: 204 QNQGKGKIKNC 205
+N+ K +++NC
Sbjct: 230 KNRSKSRVRNC 232
BLAST of Moc09g13150 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 41/164 (25.00%), Postives = 82/164 (50.00%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDDKWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIWD 60
++ +L + + L + + DD W K E A + + L+D L+ T +I +
Sbjct: 23 IRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILE 82
Query: 61 HLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECAE 120
+L+ +YE +SL +++ L++ L +L++S + H + + L S+L + G KIE +
Sbjct: 83 NLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKIS 142
Query: 121 LLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRN 165
LL +LP YD +I + + L + +L++E + +N
Sbjct: 143 HLLITLPSCYDG-IITAIETLSEENLTLAFVKNRLLDQEIKIKN 185
BLAST of Moc09g13150 vs. ExPASy TrEMBL
Match:
A0A5A7SNG9 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 SV=1)
HSP 1 Score: 328.2 bits (840), Expect = 3.2e-86
Identity = 187/329 (56.84%), Postives = 217/329 (65.96%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MKV+LR DNCL AI A++TDD KWN+M+GNA+ N+HLALAD VLSSI+ KK EIW
Sbjct: 22 MKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIHLALADNVLSSIKEKKIAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KLYET+SLHNKIFLKR LYTLRMSEST MTEH+NTLNTLFSQL LG KIEPNE A
Sbjct: 82 DHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNTLNTLFSQLALLGYKIEPNERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSL DSYDQLVINL NN+L DYL+F+D+ + VLEEENRR+NK DKL + QQAEAL
Sbjct: 142 ELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEEENRRKNKEDKLITLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQ-------------------------------GK---------- 240
VTRGR EL + + Q GK
Sbjct: 202 VTRGRPLELAAKIKEGQSHEKDSNPQGNVASTINEGGALSCEAVTTTEGKKRMADGWFFD 261
Query: 241 ----------------------GKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVE 266
G + +C+DHALKIV IGTIKLK HDN V TIQ+V+HVE
Sbjct: 262 SGATYHMTSRREWFHNYKPISGGSLFSCNDHALKIVDIGTIKLKLHDNIVCTIQQVRHVE 321
BLAST of Moc09g13150 vs. ExPASy TrEMBL
Match:
A0A5A7V644 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 SV=1)
HSP 1 Score: 317.4 bits (812), Expect = 5.7e-83
Identity = 176/291 (60.48%), Postives = 199/291 (68.38%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MKV+LRKDNCL + R A++ DD KWN+M+GNA AN+HLALAD VLSSIE KKT EIW
Sbjct: 22 MKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIHLALADNVLSSIEEKKTAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KLY+ +SLHNKIFLKR LYTLRMSEST MTEH+N LNTLFSQLT L KIEPNE A
Sbjct: 82 DHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNILNTLFSQLTLLAYKIEPNERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQLVINLTNN+LTDYL+F+D+ + VLEEENRR+NK DKL SSQQAEALV
Sbjct: 142 ELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEEENRRKNKEDKLVSSQQAEALV 201
Query: 181 VTRGRSTELGSNGSQNQGK----------------------------------------- 231
VTRGRS+E S+GS+NQG+
Sbjct: 202 VTRGRSSECNSSGSKNQGRSKSRRNVASTINEGGALSCEAVTTMEGKKRMADGWFFDLGA 261
BLAST of Moc09g13150 vs. ExPASy TrEMBL
Match:
A0A6A3BAP3 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110202pilonHSYRG00134 PE=4 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 9.7e-83
Identity = 168/265 (63.40%), Postives = 201/265 (75.85%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MK ILRKD CLA I+ D DD KWN+M+GNA+AN +LALAD+VLSSIE KKT EIW
Sbjct: 22 MKAILRKDGCLAVINEMPMDFADDNKWNEMDGNAMANFNLALADEVLSSIEEKKTAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KL+E SLHNKIFLKR LYTLRMSEST +T+H+NTLNTLFSQLTSL CKI E A
Sbjct: 82 DHLTKLHEATSLHNKIFLKRKLYTLRMSESTSVTDHLNTLNTLFSQLTSLSCKIVEQERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQL+INLTNN +T L F+D+ VL+EENR +NK D+ + QQAEAL
Sbjct: 142 ELLLQSLPDSYDQLIINLTNNNVTS-LVFDDVAVVVLQEENRHKNKEDRQVNLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQGKGKIKNCDDHALKIVSIGTIKLKFHDNTVRTIQKVQHVEGLT 240
RGRSTE G + S G G + +C+DHAL+IV +GTIKLK +D T++ ++ V+H++GL
Sbjct: 202 TMRGRSTERGQSSSHKHG-GSVYSCNDHALEIVGVGTIKLKMYDGTIKVVRDVRHLKGLK 261
Query: 241 KNFLSVGQLDNLDCKVIGEKSIIKV 265
KN LS G LDN K+ K IIKV
Sbjct: 262 KNLLSYGLLDNNASKIETRKGIIKV 284
BLAST of Moc09g13150 vs. ExPASy TrEMBL
Match:
A0A6A3AGK4 (Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110480pilonHSYRG00021 PE=3 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 1.4e-81
Identity = 169/286 (59.09%), Postives = 202/286 (70.63%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
MK ILRKD CLAAIS R D DD KWN+M+GNA++N HLALAD+VLSSIE KKT EIW
Sbjct: 22 MKAILRKDGCLAAISERPVDFIDDNKWNEMDGNAMSNFHLALADEVLSSIEEKKTAKEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL KLYE SLHNKIFLKR LYTLRMSEST +TEH+NTLNTLFSQLTSL C I E
Sbjct: 82 DHLTKLYEVTSLHNKIFLKRKLYTLRMSESTSVTEHLNTLNTLFSQLTSLRCTIGEQERV 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQL+INLTN+ +T + F+D+ A VL+EENRR+NK D+ + QQAEAL
Sbjct: 142 ELLLQSLPDSYDQLIINLTNSNVTSIV-FDDVAAAVLQEENRRKNKEDRQVNLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQGK---------------------GKIKNCDDHALKIVSIGTIK 240
RGRS E G + S G G + +C+DHAL+I+ +GTIK
Sbjct: 202 TMRGRSAERGQSSSHKHGNTANSSDDGDTLLCEASTTVEGGSVYSCNDHALEIIGVGTIK 261
Query: 241 LKFHDNTVRTIQKVQHVEGLTKNFLSVGQLDNLDCKVIGEKSIIKV 265
LK +D T++ ++ V+HV+GL KN LS G LDN K+ K I+KV
Sbjct: 262 LKMYDGTIKVVRDVRHVKGLKKNLLSYGLLDNNASKIETRKGIMKV 306
BLAST of Moc09g13150 vs. ExPASy TrEMBL
Match:
Q6BCY1 (Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.8e-81
Identity = 177/352 (50.28%), Postives = 216/352 (61.36%), Query Frame = 0
Query: 1 MKVILRKDNCLAAISARSADVTDD-KWNKMEGNAVANLHLALADKVLSSIEGKKTTNEIW 60
+K ILRKDNCLAAIS R D TDD KW++M +A+A+L+L++AD VLSSIE KKT NEIW
Sbjct: 22 VKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLYLSIADGVLSSIEEKKTANEIW 81
Query: 61 DHLEKLYETRSLHNKIFLKRILYTLRMSESTPMTEHINTLNTLFSQLTSLGCKIEPNECA 120
DHL +LYE +SLHNKIFLKR LYTLRMSEST +TEH+NTLNTLFSQLTSL CKIEP E A
Sbjct: 82 DHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNTLNTLFSQLTSLSCKIEPQERA 141
Query: 121 ELLLQSLPDSYDQLVINLTNNVLTDYLNFEDIGATVLEEENRRRNKVDKLASSQQAEALV 180
ELLLQSLPDSYDQL+INLTNN+LTDYL F+D+ A VLEEE+RR+NK D+ + QQAEAL
Sbjct: 142 ELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEEESRRKNKEDRQVNLQQAEALT 201
Query: 181 VTRGRSTELGSNGSQNQGK----------------------------------------- 240
V RGRSTE G + + + K
Sbjct: 202 VMRGRSTERGQSSGRGRSKSSKKNLTCYNCGKKGHLKKDCWNLAQNSNPQGNVASTSDDG 261
Query: 241 ----------------------------------------------GKIKNCDDHALKIV 265
G + +CDDHAL+I+
Sbjct: 262 SALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFHHYEPISGGSVYSCDDHALEII 321
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0026163.1 | 6.7e-86 | 56.84 | Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa... | [more] |
GEW42722.1 | 4.3e-85 | 59.60 | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerarii... | [more] |
KAA0061179.1 | 1.2e-82 | 60.48 | Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa... | [more] |
KAE8713996.1 | 2.0e-82 | 63.40 | hypothetical protein F3Y22_tig00110202pilonHSYRG00134 [Hibiscus syriacus] | [more] |
GEX02811.1 | 1.0e-81 | 54.21 | hypothetical protein [Tanacetum cinerariifolium] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.4e-22 | 35.08 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 1.1e-09 | 25.00 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SNG9 | 3.2e-86 | 56.84 | Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 S... | [more] |
A0A5A7V644 | 5.7e-83 | 60.48 | Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 S... | [more] |
A0A6A3BAP3 | 9.7e-83 | 63.40 | Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110202pilon... | [more] |
A0A6A3AGK4 | 1.4e-81 | 59.09 | Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=... | [more] |
Q6BCY1 | 1.8e-81 | 50.28 | Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |