Moc09g10660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g10660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 9065036 .. 9067897 (-)
RNA-Seq Expression	Moc09g10660
Synteny	Moc09g10660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGATCGACCATTAGGCAAGGCCTTCAGGTCGACCTTTATGGGAGCTCTTCAGATCAGCCACTTCAGGTCGACCACCCTAGAAGACCTAAGGTCGGCCACCAGGGAAGACCTTTACAGTTAGACATTTCTTTGTCCTCCACGTGGTAGTAACATTTTCACCCCAAAAATCTTGATAAGATTTTTCACGGTAGGTACCAAATTGGTCAAAAATTTAAACTATAGAGACTAAATTGTTACATATCAAAGTTTAGAGACGGTATTATTACCAATTTGAAAGTATAGAGACTAAATCATTACTTTAGTAAAAGTACGAGTTATTTTTCATTCAAATTTTTTAAAATATTTAATTATATTCTTTAAAATAAAGTTTAAATATTATTTTTGTGTAGTTTTATAGCTTTGGTTGATTTTAAAATTTTGCACAATTACATTAATTATATATATATATATATTCTAATAAAATTGAAAATTATATTTAAAACATCAACTCCTCCACTATTTTTTTTTTTCCTTAGATCACCACCCCACCCCTGTAACTATCATAATATCTTCTTTTATTTGCAAAAGGATAATGTTTTAAATTGACCCTTGAATTTTTAGAATTTTTAGAATAGGTATAGGAAACAACTTTAGAACCACTATACATTTTTAATTCTTCAAAATCATTAGCTAGAGAATAGTGATTTTCTACCACATTTATTTTAGCAGAGTAGGAGGAAGAAACCCATTTGAATTTCTGAGTCCGAAGGATGTAAGTAATGTATTTATCAGTTGAATTATGTTAATGTTAACTTTATTACCGAATATTTCAACTACTCGTTTGAAAATAAGAATGAAAAAGATATTTTAAAATCAATTTCTCAAAATAAACCCTTAATTTGACAAATTTTGTCCTTAAATATTAATATTACTTTTTATTAAGCTTCATGCCAAAAGTATCATAAAATTACGTTTGAATGATATTATGTCTTTACACTATCAAAATTATTACTTTTTTGTTTATGAACTTCTAAATATATTTCTTAGTGCCGTGAATTTATAGGGTTTATTATATCTTCATGAAGTTTCAAAGTATATGCTTTAATCAATGTACTAAAAGAAATAATCATTTTAGATCTCATTGTTATTTTGTCCTTAATGGTTTAATGGATACACAATACGAGGTTTCAAATATATGTTAACATGCTGATGTGATGTTAACTTAGGTTGGTTAACCAAAAAGGTCTTCAACCACATTAATTAACCACGAAATAATTTTCGTCGCATTTCCAGCAACGAAATCAATTTATCGTCGCAGACTAGCAACGAAAATGATTTTGCGTCGCTGGAGAACCTTTCATCGCTGCAAAGCGACGAAATGTCAAACGACGCCATTTTGGGCGGACGATGAAACTATTTTCGTCGCCCAGCCCCTCAAACAACTCAACCCTTCCCTTTCTCCTCATTTGTTACGTTTCTGCCTCTTCCATTTCTCTCCCCCATTTTCGTGTTCCAACACTGCCGCCCGCCTCAAAGGTCGTCCTTGCCGTCTGTTTCTTCAACAAAATCATCGGCTGTTGGTTCGTTTCAATACCTAGGTAAGTATATTTGGTTTTTGAGTTTTATTTTTGTTGATTTATACCTTATATGCCCTATTTTGTGTGTATAATCGGCCCTCATGGTTTGGGACTTCTTTTCGCCGGAATTCTTTCATCGATCCTTGTTTTGCACTAAAGGATTTAGCATATTGGTACAAACTTTTTTCTTTTCATTTTATTTAAAGTAGGTTTATTATTTCAATTGATTTATTGTGTTATGCATGTTTTGTTTAGGGTCCAATAATTAAATTTGTGTTAAATATATACGTTTGAAATTTACTTTTGATTTTGTTTAGACTTTGATTGGAATTAAGTTTAAGATCGTTCATGTACATTGAAAAAGTATGTCTATTATTTGAATTTATTTATGTATTACGTTTGAAATTTAGTTTAAATTTTATTTTGAATTTGCTTTGAATTAATTTTAAGAATGTTCTTATCAAGTTATTTTAAAATTAAATTCTTAATGAAATATGTTTGTTTAGAGTTCTTTTTAAAATTATTCTTTGTAAGTTTTTTAATTGGAATAATGAAATTTTCTTGAAAATATGTTTGGAATTAGTTTTGTTGTTTAGAATTTGCTTTAAATTATACTTTTAATATATTTGCTTTTGTTGGGTAGAAAATGATTGATGACCTTAGATAAGATATGAACTTATGATTTGTAGTAGTATGTTATATGTTTTGCATCTCATTATTGTTAATAATATGATGCTATAGAAAAAAGAAGATGATACATATTTGAGCTCCTTTGAGCTTTTTTACGCGACACATTGCCATCCGACAAAGACTTGGACCAACGAAGCTGCTCAAAATGCATATGCAAGTACTAAGCTGATGATATAAATTTAGTGGTAATATCTAATCAGAATTCTAGCTAATATATTTGTTTGTGCAGGACAAAATGGTGGCCTTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCTATGGAGATAGCCCTCGGAAAAAGATCATCATACACTAAAGGGATAGGATATGGTTCGAAGCCACCTAGTAAAAAAGCGTCGGCAAGATGCTCACAAGAATACGTACTGACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTAAAGAGCCAACGAGAGGAATTATTAGAGGCACAACGTTTGCAGGCTGAACAACAAGCAAGTCAACACAAGACTTACTTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAAATGGAAAAAATTCTCAATAGCTTTACAGGAGGAGGAGGAAGTTCATCGTTGA

mRNA sequence

ATGGTAAGATCGACCATTAGGCAAGGCCTTCAGGTCGACCTTTATGGGAGCTCTTCAGATCAGCCACTTCAGGTCGACCACCCTAGAAGACCTAAGGACAAAATGGTGGCCTTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCTATGGAGATAGCCCTCGGAAAAAGATCATCATACACTAAAGGGATAGGATATGGTTCGAAGCCACCTAGTAAAAAAGCGTCGGCAAGATGCTCACAAGAATACGTACTGACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTAAAGAGCCAACGAGAGGAATTATTAGAGGCACAACGTTTGCAGGCTGAACAACAAGCAAGTCAACACAAGACTTACTTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAAATGGAAAAAATTCTCAATAGCTTTACAGGAGGAGGAGGAAGTTCATCGTTGA

Coding sequence (CDS)

ATGGTAAGATCGACCATTAGGCAAGGCCTTCAGGTCGACCTTTATGGGAGCTCTTCAGATCAGCCACTTCAGGTCGACCACCCTAGAAGACCTAAGGACAAAATGGTGGCCTTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCTATGGAGATAGCCCTCGGAAAAAGATCATCATACACTAAAGGGATAGGATATGGTTCGAAGCCACCTAGTAAAAAAGCGTCGGCAAGATGCTCACAAGAATACGTACTGACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTAAAGAGCCAACGAGAGGAATTATTAGAGGCACAACGTTTGCAGGCTGAACAACAAGCAAGTCAACACAAGACTTACTTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAAATGGAAAAAATTCTCAATAGCTTTACAGGAGGAGGAGGAAGTTCATCGTTGA

Protein sequence

MVRSTIRQGLQVDLYGSSSDQPLQVDHPRRPKDKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGIGYGSKPPSKKASARCSQEYVLTLEARVARNEELLKSQREELLEAQRLQAEQQASQHKTYLICNDRNMREDLAKWKKFSIALQEEEEVHR

Homology

[Close]

BLAST of Moc09g10660 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-05
Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 29  RRPKDKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGIGYGSKPP-SKKASARCSQE 88
           R   ++M+ L      +G E +EE+ ME  LGKRS+Y  G+GYG KP  +K +S++ S E
Sbjct: 106 REDSEEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 165

Query: 89  YVLTLEARVARN-EELLKSQREELLEAQRLQAEQ 121
           YV +LEAR+ ++ EE+ ++ +E++ +A   Q+++
Sbjct: 166 YVESLEARLQKHEEEMARTTQEQIQKALEAQSQE 199

[Close]

BLAST of Moc09g10660 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-05
Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 29  RRPKDKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGIGYGSKPP-SKKASARCSQE 88
           R   ++M+ L      +G E +EE+ ME  LGKRS+Y  G+GYG KP  +K +S++ S E
Sbjct: 101 REDSEEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 160

Query: 89  YVLTLEARVARN-EELLKSQREELLEAQRLQAEQ 121
           YV +LEAR+ ++ EE+ ++ +E++ +A   Q+++
Sbjct: 161 YVESLEARLQKHEEEMARTTQEQIQKALEAQSQE 194

[Close]

BLAST of Moc09g10660 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05
Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 29  RRPKDKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGIGYGSKPP-SKKASARCSQE 88
           R   ++M+ L      +G E +EE+ ME  LGKRS+Y  G+GYG KP  +K +S++ S E
Sbjct: 101 REDSEEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 160

Query: 89  YVLTLEARVARN-EELLKSQREELLEAQRLQAEQ 121
           YV +LEAR+ ++ EE+ ++ +E++ +A   Q+++
Sbjct: 161 YVESLEARLQKHEEEMARTTQEQIQKALEAQSQE 194

[Close]

BLAST of Moc09g10660 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05
Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 29  RRPKDKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGIGYGSKPP-SKKASARCSQE 88
           R   ++M+ L      +G E +EE+ ME  LGKRS+Y  G+GYG KP  +K +S++ S E
Sbjct: 106 REDSEEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDE 165

Query: 89  YVLTLEARVARN-EELLKSQREELLEAQRLQAEQ 121
           YV +LEAR+ ++ EE+ ++ +E++ +A   Q+++
Sbjct: 166 YVESLEARLQKHEEEMARTTQEQIQKALEAQSQE 199

The following BLAST results are available for this feature:

BLAST of Moc09g10660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148911.1	5.9e-05	38.30	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_022143616.1	5.9e-05	38.30	uncharacterized protein LOC111013476 [Momordica charantia]	[more]

BLAST of Moc09g10660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g10660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQT5	2.8e-05	38.30	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1D6S9	2.8e-05	38.30	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Moc09g10660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	COILS	Coil	Coil	coord: 89..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g10660.1	Moc09g10660.1	mRNA