Moc09g04820 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g04820
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein YLS3-like
Location	chr9: 3687376 .. 3688930 (-)
RNA-Seq Expression	Moc09g04820
Synteny	Moc09g04820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCCATTTTGCTTTCAAATTGCTTCTGTTAACCCTCCTGCTAACGTCACCGGCGGTGAGGTTGGTGACAGCAGATGCAGAGAAAGACAAGGAGGAGTGCACGCAGCAATTGGCGGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAATCTCCCACACCCGACTGTTGCAATGGGCTGAAGGAAGTTCTGAAGAGCAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGATTTGGGGCTTCAGATTAATGTCACGCTCGCCTTGGGCTTGCCTGATTCTTGCCATGCCTCGGCCAATGTCTCCAATTGTCCCGGTAAATTGAACCGAATCGAACTCTATTAAATTGGTCATTTAAACTAAGCTATTTTTTAAAATTTTTAATTATTTTCTTTTGACTTCGACCGTTACAAACGGATAATTGAATCATTAATTTTGAAGATGATAATAGATGTTTTATTTACTGAACTAATATTGAAATTTCCGCCCACTATTTTGTTGGGACAAAAAGCGAATATTATAAATATTCATTATTTGTGCACGCTTTGCACTACTTTGTACCACTTCAAATTAATGTTCTTTTAATTACATTTAATCTAATTAAATGTGTTTAGTTACTTAGAGTTTGATTAGAACTCTTTTTATCAATTAAATAGATGAACTTTAATAATTTGTTCATAAATTAAACTAAACCACACACTGATGACATGCTGGTGGTAGAGCCATAAATTTTTTATTGAAAAATGATAAAAGGAAGTCTTAGAGATTTTAAAATTTTAGGGACAGATTAGAAAGGAAAGCTCCAAAATCTTAATACTTCATATAATTTTTTTTGTATTCAAACCAAAATGCAGTACTAGACTCTGCAAGATCTTAAGTTAGATTCTATTTTGAGTTGTCTCTCGTACTCTTTGAATTGATAGATGTACGTAAATTATCTTATCATCAAATTCGATATGTGATATGATTATAAAGGAGAAACTAAATATGGACGGTTCCAATAAGATTTCGTTACTGAACGAACCCTTTTTTTTTAAATTTATTTCATCTATTTCATGATTGGAACCAGAGGAATACACCTTACACCGCAATTTTTATTTAATTTGGTATGTTTGTTTGTTTTTGTTATTTTTTTTCTTTAAATTCTAATGGGATATGTAAAAAAATGGGATTGATGCAGCTCTTTTAAACTTGCCACCAAATTCCCCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGAGCAACAGCTCCTCTGCTGCTGCTTCAGCAGCTGCTCCAATTAGCCCTTCTTCTACCACTAATTCTACTGGTAAATTGGCTTTTGAAATTTCTTAACTTTTGGAGTTTGGAAAAGAAAATGATGCTCATTAATGGCTTAATTCTCCTTCAATACATTGCAGTTGGAGGGGGAAGCAGAATTGGACCAGACAAGGGTGAAGCTTGCTACAGAGGAAACAAATGGCTGCCATTGGAGAACTTGGTTTTTGGAGCTCTTTTACTCTGTTTTTTCTTGGATTCACTCTATGTGTAG

mRNA sequence

ATGGACTTCCATTTTGCTTTCAAATTGCTTCTGTTAACCCTCCTGCTAACGTCACCGGCGGTGAGGTTGGTGACAGCAGATGCAGAGAAAGACAAGGAGGAGTGCACGCAGCAATTGGCGGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAATCTCCCACACCCGACTGTTGCAATGGGCTGAAGGAAGTTCTGAAGAGCAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGATTTGGGGCTTCAGATTAATGTCACGCTCGCCTTGGGCTTGCCTGATTCTTGCCATGCCTCGGCCAATGTCTCCAATTGTCCCGCTCTTTTAAACTTGCCACCAAATTCCCCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGAGCAACAGCTCCTCTGCTGCTGCTTCAGCAGCTGCTCCAATTAGCCCTTCTTCTACCACTAATTCTACTGTTGGAGGGGGAAGCAGAATTGGACCAGACAAGGGTGAAGCTTGCTACAGAGGAAACAAATGGCTGCCATTGGAGAACTTGGTTTTTGGAGCTCTTTTACTCTGTTTTTTCTTGGATTCACTCTATGTGTAG

Coding sequence (CDS)

ATGGACTTCCATTTTGCTTTCAAATTGCTTCTGTTAACCCTCCTGCTAACGTCACCGGCGGTGAGGTTGGTGACAGCAGATGCAGAGAAAGACAAGGAGGAGTGCACGCAGCAATTGGCGGGGATGGCCACGTGTCTGCCGTACGTGAGCGGTGACGCAAAATCTCCCACACCCGACTGTTGCAATGGGCTGAAGGAAGTTCTGAAGAGCAACAAGAAGTGCTTGTGCGTTATAGTTAAAGACCGAAATGACCCTGATTTGGGGCTTCAGATTAATGTCACGCTCGCCTTGGGCTTGCCTGATTCTTGCCATGCCTCGGCCAATGTCTCCAATTGTCCCGCTCTTTTAAACTTGCCACCAAATTCCCCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGAGCAACAGCTCCTCTGCTGCTGCTTCAGCAGCTGCTCCAATTAGCCCTTCTTCTACCACTAATTCTACTGTTGGAGGGGGAAGCAGAATTGGACCAGACAAGGGTGAAGCTTGCTACAGAGGAAACAAATGGCTGCCATTGGAGAACTTGGTTTTTGGAGCTCTTTTACTCTGTTTTTTCTTGGATTCACTCTATGTGTAG

Protein sequence

MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLENLVFGALLLCFFLDSLYV

Homology

[Close]

BLAST of Moc09g04820 vs. NCBI nr
Match: XP_022150545.1 (protein YLS3-like [Momordica charantia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC
Sbjct: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP
Sbjct: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL
Sbjct: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDSLYV 200
           ENLVFGALLLCFFLDSLYV
Sbjct: 181 ENLVFGALLLCFFLDSLYV 199

[Close]

BLAST of Moc09g04820 vs. NCBI nr
Match: XP_038899115.1 (non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 8.3e-81
Identity = 161/197 (81.73%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 3   FHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCN 62
           FHF +K LLLTLLLTSP V  V  D EKDKEECTQQLAGMATCLPYVSG AK+PTPDCC+
Sbjct: 4   FHFTWKWLLLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGGAKAPTPDCCS 63

Query: 63  GLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNS 122
           GLKEVLK+NKKCLCVI+KDRNDPDLGLQINVTLALGLPD CHA+ANVSNCPALLNLPPNS
Sbjct: 64  GLKEVLKNNKKCLCVIIKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALLNLPPNS 123

Query: 123 PEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLEN 182
            EAQVFYQLGK NSSS+A  A APISPS T NSTVGGGSRIGPDKG A   G KWLPLE 
Sbjct: 124 AEAQVFYQLGKGNSSSSAV-APAPISPSPTINSTVGGGSRIGPDKGGAYNIGKKWLPLET 183

Query: 183 LVFGALLLCFFLDSLYV 200
           L  GALLL F+LDS +V
Sbjct: 184 LAVGALLLLFWLDSYHV 199

[Close]

BLAST of Moc09g04820 vs. NCBI nr
Match: XP_023513729.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 156/196 (79.59%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           M FHF  K LLL LLL SPAV  +  DAEKD+EECTQQLAGMATCL YVSGDAK+PTPDC
Sbjct: 1   MGFHFGCKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           C+GLK VLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSNCPALLNLPP
Sbjct: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           NSPEAQVFYQ GK+ SSSA   AAAPISPS   NST GGGSR G DKGEA   GNKWLPL
Sbjct: 121 NSPEAQVFYQFGKAQSSSA---AAAPISPSPAINSTGGGGSRNGTDKGEAYTIGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDS 197
           ++LV  ALL+ F LDS
Sbjct: 181 KSLVVAALLVLFLLDS 193

[Close]

BLAST of Moc09g04820 vs. NCBI nr
Match: XP_022959693.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 9.5e-77
Identity = 155/196 (79.08%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           M FHFA K LLL LLL SPAV  +  DAEKD+EECTQQLAGMATCL YVSGDAK+PTPDC
Sbjct: 1   MGFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           C+GLK VLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSNCPALLNLPP
Sbjct: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           +SPEAQVFYQ GK+ SSSA   AAAPISPS   +ST GGGSR G DKGEA   GNKWLPL
Sbjct: 121 SSPEAQVFYQFGKAQSSSA---AAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDS 197
           ++LV  ALL+ F LDS
Sbjct: 181 KSLVVAALLVLFLLDS 193

[Close]

BLAST of Moc09g04820 vs. NCBI nr
Match: XP_023004343.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 156/199 (78.39%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           M FHF  K LLLTLLL SPAV  +  DAEKD+EECTQQLAGMATCL YVSGDAK+PTPDC
Sbjct: 1   MGFHFGCKWLLLTLLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           C+GLK VLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVS CPALLNLPP
Sbjct: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSTCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           +SPEAQVFYQ GK+ SSSA   AAAPISPS   NST GGGSR G DKGEA   GNKWLPL
Sbjct: 121 SSPEAQVFYQFGKAQSSSA---AAAPISPSPAINSTGGGGSRNGTDKGEAYTVGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDSLYV 200
           + L  GALL+ F LDS  V
Sbjct: 181 KTLFVGALLVLFLLDSCRV 196

[Close]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-47
Identity = 106/185 (57.30%), Postives = 127/185 (68.65%), Query Frame = 0


Query: 8   KLLLLTLLLTSPAVRLVTA---DAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGL 67
           K+ L+   +    V +V A   D  KDKEECT+QL GMATCLPYV G AKSPTPDCC+GL
Sbjct: 5   KINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGL 64

Query: 68  KEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPE 127
           K+VL SNKKCLCVI++DRNDPDLGLQINV+LAL LP  CHA+A+V+ CPALL+L PNSP+
Sbjct: 65  KQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPD 124

Query: 128 AQVFYQLGKSNSSSAAASA-----AAPISPSSTTNSTVG---GGSRIGPDKGEACYRGNK 182
           AQVFYQL K  + +  ASA       PIS S T+ S  G   G +   P +  A     +
Sbjct: 125 AQVFYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQ 184

[Close]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.9e-46
Identity = 98/191 (51.31%), Postives = 129/191 (67.54%), Query Frame = 0


Query: 12  LTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEVLKSN 71
           + L++ +  V    AD  KDKEECT QL GMATCLPYV G AKSPTPDCC+GLK+V+ S+
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 72  KKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPEAQVFYQL 131
            KCLC+I+++RNDPDLGLQ+NV+LAL LP  CHA+A+++ CPALL+L PNSP+AQVFYQL
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 132 GKS-----NSSSAAASAAAPISPSSTTNSTVG---GGSRIGPDKGEACYRGNKWLPLENL 191
            K      ++S+   SA+ P S SST  S+ G   G +   P    A     +WL LE +
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEVV 192

Query: 192 VFGALLLCFFL 195
               ++   F+
Sbjct: 193 AHFFVIFYIFI 203

[Close]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 72/187 (38.50%), Postives = 118/187 (63.10%), Query Frame = 0


Query: 8   KLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEV 67
           + L +T+++TS  +    +D  +D+EECT QL  ++TC+PYV GDAK+PT DCC G  +V
Sbjct: 6   RTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQV 65

Query: 68  LKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASA-NVSNCPALLNLPPNSPEAQ 127
           ++ ++KC+C++V+D++DP LG++IN TLA  LP +CH +A N+++C ++L+LP NS  A+
Sbjct: 66  IRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAK 125

Query: 128 VFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLENLVFG 187
            F  LG+   +  +       SP+       GGG +  P K    ++   WL +E L++ 
Sbjct: 126 EFENLGRIEDNYNST------SPTQIHKDGTGGG-KAEPVKSNG-WKEKSWLGVELLIYL 184

Query: 188 ALLLCFF 194
            + L FF
Sbjct: 186 LVSLIFF 184

[Close]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 53/141 (37.59%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 11  LLTLLLTSPAVRL-VTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEVLK 70
           +L L +T   + L V ++  +D + C   ++ + +CLP+V+  AK+P   CC+ LK  + 
Sbjct: 13  MLALCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 72

Query: 71  --SNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPEAQV 130
               +KCLC +VKDR+DP LG +++   A+ LP +CH  AN+S CP LL+L P+SP +Q+
Sbjct: 73  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQI 132

Query: 131 FYQLGKSNSSSAAASAAAPIS 149
           F Q  +S+S +    A +  S
Sbjct: 133 FKQFTESSSQTVGHKAVSTSS 153

[Close]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot
Match: Q9C7F7 (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana OX=3702 GN=LTPG1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.0e-12
Identity = 51/165 (30.91%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 9   LLLLTL-LLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEV 68
           L+L+T+ ++ S A     A      +EC Q    +  CL + +G A  P+  CC+ ++++
Sbjct: 8   LVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDI 67

Query: 69  LKSNKKCLCVIVKDRND-----PDLGLQINVTLALGLPDSCHA-SANVSNCPALLNLPPN 128
            + + KCLC +++          DLG+Q +  +   LP SC   +A+++NCP LL + P+
Sbjct: 68  KERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQ--LPTSCQLHNASITNCPKLLGISPS 127

Query: 129 SPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPD 167
           SP+A VF     +N+++    A A  SP++   ST  GGS    D
Sbjct: 128 SPDAAVF-----TNNATTTPVAPAGKSPATPATSTDKGGSASAKD 165

[Close]

BLAST of Moc09g04820 vs. ExPASy TrEMBL
Match: A0A6J1D8S3 (protein YLS3-like OS=Momordica charantia OX=3673 GN=LOC111018659 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC
Sbjct: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP
Sbjct: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL
Sbjct: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDSLYV 200
           ENLVFGALLLCFFLDSLYV
Sbjct: 181 ENLVFGALLLCFFLDSLYV 199

[Close]

BLAST of Moc09g04820 vs. ExPASy TrEMBL
Match: A0A6J1H6P3 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111460690 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.6e-77
Identity = 155/196 (79.08%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           M FHFA K LLL LLL SPAV  +  DAEKD+EECTQQLAGMATCL YVSGDAK+PTPDC
Sbjct: 1   MGFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           C+GLK VLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSNCPALLNLPP
Sbjct: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           +SPEAQVFYQ GK+ SSSA   AAAPISPS   +ST GGGSR G DKGEA   GNKWLPL
Sbjct: 121 SSPEAQVFYQFGKAQSSSA---AAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDS 197
           ++LV  ALL+ F LDS
Sbjct: 181 KSLVVAALLVLFLLDS 193

[Close]

BLAST of Moc09g04820 vs. ExPASy TrEMBL
Match: A0A6J1KZ76 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111497688 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.8e-77
Identity = 156/199 (78.39%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MDFHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDC 60
           M FHF  K LLLTLLL SPAV  +  DAEKD+EECTQQLAGMATCL YVSGDAK+PTPDC
Sbjct: 1   MGFHFGCKWLLLTLLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60

Query: 61  CNGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPP 120
           C+GLK VLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVS CPALLNLPP
Sbjct: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSTCPALLNLPP 120

Query: 121 NSPEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPL 180
           +SPEAQVFYQ GK+ SSSA   AAAPISPS   NST GGGSR G DKGEA   GNKWLPL
Sbjct: 121 SSPEAQVFYQFGKAQSSSA---AAAPISPSPAINSTGGGGSRNGTDKGEAYTVGNKWLPL 180

Query: 181 ENLVFGALLLCFFLDSLYV 200
           + L  GALL+ F LDS  V
Sbjct: 181 KTLFVGALLVLFLLDSCRV 196

[Close]

BLAST of Moc09g04820 vs. ExPASy TrEMBL
Match: A0A1S3CDS0 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103499877 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.6e-61
Identity = 139/191 (72.77%), Postives = 147/191 (76.96%), Query Frame = 0


Query: 3   FHFAFKLLLLTLLLTSP-AVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCC 62
           F   FK  LL LLL SP +VR V  D +KDKEECT QLAGMATCLPYVSGDAK+PTPDCC
Sbjct: 4   FRLCFKWFLLMLLLRSPSSVRFVGGDDKKDKEECTPQLAGMATCLPYVSGDAKTPTPDCC 63

Query: 63  NGLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPN 122
           +GLKEVLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA+ANVSNCPALLNLP N
Sbjct: 64  SGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALLNLPSN 123

Query: 123 SPEAQVFYQLGKSNSSSAAASAAAPISPSS--TTNSTVGGGSRIGPDKGEACYRGNKWLP 182
           S EAQVFYQLGK  SSSA A A   ISPSS  T +STVGGGS     K      G KW+P
Sbjct: 124 SSEAQVFYQLGKGKSSSALAPAPI-ISPSSPATISSTVGGGS----TKSGGYKIGKKWVP 183

Query: 183 LENLVFGALLL 191
            E LV    LL
Sbjct: 184 SEILVVVVALL 189

[Close]

BLAST of Moc09g04820 vs. ExPASy TrEMBL
Match: A0A0A0K6P6 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430130 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.4e-59
Identity = 135/190 (71.05%), Postives = 153/190 (80.53%), Query Frame = 0


Query: 5   FAFK-LLLLTLLLTSPA-VRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCN 64
           F+FK L L+ LLL SP+ VR V  D +KD+EECT QLAGMATCLPYVSGDAK+PTPDCC+
Sbjct: 7   FSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCS 66

Query: 65  GLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNS 124
           GLKEVL+++KKCLCVIV+DRNDPDLGLQINVTLAL LPD CHA+ANVSNCPALLN+P NS
Sbjct: 67  GLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNS 126

Query: 125 PEAQVFYQLGKSNSSSAAASAAAPISPSS--TTNSTVGGGSRIGPDKGEACYRGNKWLPL 184
            +AQVFYQLGK  SSSA A A   +SPSS  T NSTVGGGS+ G + GE   RG K + L
Sbjct: 127 SDAQVFYQLGKGKSSSALAPAPM-LSPSSSPTINSTVGGGSKSGAE-GEGYKRGKKRVAL 186

Query: 185 ENLVFGALLL 191
           E LV  A LL
Sbjct: 187 EILVVVAPLL 194

[Close]

BLAST of Moc09g04820 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 2.6e-48
Identity = 106/185 (57.30%), Postives = 127/185 (68.65%), Query Frame = 0


Query: 8   KLLLLTLLLTSPAVRLVTA---DAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGL 67
           K+ L+   +    V +V A   D  KDKEECT+QL GMATCLPYV G AKSPTPDCC+GL
Sbjct: 5   KINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGL 64

Query: 68  KEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPE 127
           K+VL SNKKCLCVI++DRNDPDLGLQINV+LAL LP  CHA+A+V+ CPALL+L PNSP+
Sbjct: 65  KQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPD 124

Query: 128 AQVFYQLGKSNSSSAAASA-----AAPISPSSTTNSTVG---GGSRIGPDKGEACYRGNK 182
           AQVFYQL K  + +  ASA       PIS S T+ S  G   G +   P +  A     +
Sbjct: 125 AQVFYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQ 184

[Close]

BLAST of Moc09g04820 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.9e-47
Identity = 98/191 (51.31%), Postives = 129/191 (67.54%), Query Frame = 0


Query: 12  LTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEVLKSN 71
           + L++ +  V    AD  KDKEECT QL GMATCLPYV G AKSPTPDCC+GLK+V+ S+
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 72  KKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPEAQVFYQL 131
            KCLC+I+++RNDPDLGLQ+NV+LAL LP  CHA+A+++ CPALL+L PNSP+AQVFYQL
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 132 GKS-----NSSSAAASAAAPISPSSTTNSTVG---GGSRIGPDKGEACYRGNKWLPLENL 191
            K      ++S+   SA+ P S SST  S+ G   G +   P    A     +WL LE +
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEVV 192

Query: 192 VFGALLLCFFL 195
               ++   F+
Sbjct: 193 AHFFVIFYIFI 203

[Close]

BLAST of Moc09g04820 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 72/187 (38.50%), Postives = 118/187 (63.10%), Query Frame = 0


Query: 8   KLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEV 67
           + L +T+++TS  +    +D  +D+EECT QL  ++TC+PYV GDAK+PT DCC G  +V
Sbjct: 49  RTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQV 108

Query: 68  LKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASA-NVSNCPALLNLPPNSPEAQ 127
           ++ ++KC+C++V+D++DP LG++IN TLA  LP +CH +A N+++C ++L+LP NS  A+
Sbjct: 109 IRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAK 168

Query: 128 VFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLENLVFG 187
            F  LG+   +  +       SP+       GGG +  P K    ++   WL +E L++ 
Sbjct: 169 EFENLGRIEDNYNST------SPTQIHKDGTGGG-KAEPVKSNG-WKEKSWLGVELLIYL 227

Query: 188 ALLLCFF 194
            + L FF
Sbjct: 229 LVSLIFF 227

[Close]

BLAST of Moc09g04820 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-32
Identity = 72/187 (38.50%), Postives = 118/187 (63.10%), Query Frame = 0


Query: 8   KLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEV 67
           + L +T+++TS  +    +D  +D+EECT QL  ++TC+PYV GDAK+PT DCC G  +V
Sbjct: 49  RTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQV 108

Query: 68  LKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASA-NVSNCPALLNLPPNSPEAQ 127
           ++ ++KC+C++V+D++DP LG++IN TLA  LP +CH +A N+++C ++L+LP NS  A+
Sbjct: 109 IRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAK 168

Query: 128 VFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLENLVFG 187
            F  LG+   +          + +S T    GGG +  P K    ++   WL +E L++ 
Sbjct: 169 EFENLGRIEDN---------YNSTSPTQIHKGGG-KAEPVKSNG-WKEKSWLGVELLIYL 224

Query: 188 ALLLCFF 194
            + L FF
Sbjct: 229 LVSLIFF 224

[Close]

BLAST of Moc09g04820 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 53/141 (37.59%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 11  LLTLLLTSPAVRL-VTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCNGLKEVLK 70
           +L L +T   + L V ++  +D + C   ++ + +CLP+V+  AK+P   CC+ LK  + 
Sbjct: 13  MLALCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 72

Query: 71  --SNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNSPEAQV 130
               +KCLC +VKDR+DP LG +++   A+ LP +CH  AN+S CP LL+L P+SP +Q+
Sbjct: 73  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQI 132

Query: 131 FYQLGKSNSSSAAASAAAPIS 149
           F Q  +S+S +    A +  S
Sbjct: 133 FKQFTESSSQTVGHKAVSTSS 153

The following BLAST results are available for this feature:

BLAST of Moc09g04820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150545.1	3.3e-106	100.00	protein YLS3-like [Momordica charantia]	[more]
XP_038899115.1	8.3e-81	81.73	non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida]	[more]
XP_023513729.1	1.9e-77	79.59	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959693.1	9.5e-77	79.08	protein YLS3-like [Cucurbita moschata]	[more]
XP_023004343.1	1.6e-76	78.39	protein YLS3-like [Cucurbita maxima]	[more]

BLAST of Moc09g04820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64865	3.6e-47	57.30	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	6.9e-46	51.31	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
F4I082	2.1e-31	38.50	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
Q9M2G1	2.6e-21	37.59	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9C7F7	5.0e-12	30.91	Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Moc09g04820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8S3	1.6e-106	100.00	protein YLS3-like OS=Momordica charantia OX=3673 GN=LOC111018659 PE=3 SV=1	[more]
A0A6J1H6P3	4.6e-77	79.08	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111460690 PE=3 SV=1	[more]
A0A6J1KZ76	7.8e-77	78.39	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111497688 PE=3 SV=1	[more]
A0A1S3CDS0	4.6e-61	72.77	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103499877 PE=4 SV=1	[more]
A0A0A0K6P6	7.4e-59	71.05	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430130 P...	[more]

BLAST of Moc09g04820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44300.1	2.6e-48	57.30	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	4.9e-47	51.31	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	1.5e-32	38.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.2	2.0e-32	38.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	1.9e-22	37.59	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 55..69 score: 29.03 coord: 34..50 score: 29.05 coord: 90..107 score: 30.68
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 35..112 e-value: 2.2E-5 score: 33.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 20..112 e-value: 2.9E-14 score: 53.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..112 e-value: 2.0E-14 score: 55.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..113
None	No IPR available	PANTHER	PTHR33044:SF192	PROTEIN YLS3-LIKE ISOFORM X1	coord: 24..190
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 42..104 e-value: 3.08237E-16 score: 67.837
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 24..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g04820.1	Moc09g04820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015293	symporter activity