Moc08g35580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g35580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H-like superfamily protein
Location	chr8: 26131210 .. 26136259 (+)
RNA-Seq Expression	Moc08g35580
Synteny	Moc08g35580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGAGTGTCAGAGAGTCGTTAGAGCAACGTCAGAAGCTCTATCGAAGTTCATCTCTATAAGTAGAGACCCCGCCTCCCACGAAAGGTACGAGATACTATTCTCACTTTGAGTAATAGGTCGGATTGAGTACTACCTTGCTCATCAGAGTGCTAGCTCTGTTTTGCAGATACTTTAGACTTCACACATCTCATCCAAGCTTCATGGAATACGAGTTTGATCATTTTCATGATCAAATAGTTACTAAAGGGTTCATTTGGTACGTTCTCGCTTCTTGTTTTTCGTTTTTCGTTTCATATTTTTAAGAAACGTTTAAAACTAAATTGTGTAGATATTTTGGAAACAACAAACTCAAGTTTTTTTGTTTAGGTTCAGAAAACAATATAAATGTGTTACGATCTCAAAGTTTTGCCCCTCCATAAATTCTCAAAATTAAAATGATCATACATACAAATACGTATACGGCTCCGCCGCCACCCATTTGATCATAACTCAATTAATTAAAGCACATATTTTCGATAAAAATCGTGAATTTTCCCCCAAAAAATATTAAAAAATAAAAATCGAACACCTACATGTCCCAACTATATTTGCAACTAATCATTTTATAGCTTATTTTATAATATTTTATCATAATTATGTTAATAAGTCGGCCATCATTCACTTAAGTTATATTTTCAATATTGTTATTAAATGAGAATAATGTAGCAATCATTGTTGAGTATAAGAAATTTAAAAATAAATAAATAAATAAATTTACTAGGTTGGCCTCTTGTCACTCGAATAAAGAAGAAAAATATCTTATTTTAAAAAATAATAACAATAATTTTGAATTATTGCCATTATTTATAAGGGAAAAAAAAGGGTCGTCATACTTTGAAACCAATAATTTATTAATCACATTAAAAAAAATGATGAAAATGTAGGCTTCATGCCTCTTAGCATGCATTATCAAATAGAATAACTTTAATACAAATGCCCCTTGGCCTCTGTTTCATGAGCCAGGCCATGTTGATAAAACTTTAGTTTAAATCATATTTTTAATCTACAATTTTTAAATATTTTATTTTGGCTCTTGAATTTCGTAAGGAAGTTGAGAGACTATTTTCTTTTTCTTAAGTACAAGAAGTGGGAGTGGGAGATTCGAACTCATGACCTATTCATCGTAGATATATGTTAATTATCACTGAGTTACGTTCATGTTAACATATTTAAAGTGTATTTTAGTTTCAAACAGGGAGGGAAAAAATAGAGAATAAAAGATACATAAATAGTTAGTAAATTAAATCTTATCTAGTCATCTAGAATCGATTGCCATTTTAATTAGACTCCAACTCTACAACCAGCTCGAGATTTGAAACATTAAGTGATGTCTTTTGTTACGATGGTTCGTTAGCAAGTCAAAGTTTGAATTATTCGAAAACAAAAATTTGCTTTCATTGTTGTTCTTCTTGTTCTCGAGTAGTTTTACTTTCTTTGAGAACCCCAAGTTTTGAATGTACACTTTTTTAACTTGTTTTTAAGTGGACATAGAGACGTTTTTTATGTGTCCTCAAATAGTGAGTTTGAAGAACCTATCCACTTTGTTCAAAGTCTCTTCTATGATTAATAAACCATCTAGTAAAGACTTTCGTGAGCTCGACAAAGCCTCCAATAATGAACCTTTATTTCGATCTATATAACAAAAAATAAATTGAGTCATTGAGATTGGAGGAGAAAACTAAGTTAGGATGGTTACAAAAGAATTGAGTTGATTAACATAATTGAAAGTTTTTAAAATTTACAAACTAATTAAACAAACACAAGTATCAAATTTTAGAAGCTAAATTTAAATGTCAATTCGAATATTCTCGAGTTTATAAGACACTTATAACTGTCTTAAAAGTTAATGATTTATTTGTGTATGCAACGGTCTAAAAAAAATCTAAATTTATAATTTAAGCATTATTATATTCATATGAACTAAAATAAAGAGAAACAAAAAAGAAAATTAAAAATTTCTTCCCTTTGTGCTGAATTATATATAATATTGTTGGAGGCGAATTATCGCCTGTGACGTGTCAATATGGGAGATCATCAATCACCCTAATAAATGAAAGAATCTAATGAATCTTATCATTTAGACGATTTCAAACAGCTCAGCAAGGCTTGCCAAAGTCGAGCCATATTTTACTGATCATTGGTTGACATTTTCAAAGGACGAGTCTACCTTGAAAAGTACCTGCAAGTGCAAAGCACCAAACATAATCTCAAACAAGGCACTGAGAATCAGGGGTGGTCGAAGAGCCATTGGAGCACTCTCGAAAGTCCTGTTGGGAGTCCAACTCTATAAATAGAGATCTTCCACCACACGCAAGGTACGCGAAACTATATTCTCTCTCGAGTATAAATCAAATAAGTACTTACTAGAACGTCGAACTGCTAACTCTATTTTGTAGGTCTCTTTATTCGTCGATATATAATCCATCCAAGTTTCGCTAAGAGACTTAATCATTTTCTTGACAAATATATTTATGTAAAACTATGCAGACGAGAATGTTCTTAAACAAAATATATTTATGCAAGAAGCTGATATTATTTAATTAAATCAAATTTAAAAAGTTTGTTTTGATTATTAAAAGAAGAAATATATCTATTCCTTTTTTTTTTTGTGCGACACGACACCGTATCCATCGAGATACACTTCTGAAATAAAAAACATTCGGATCTGAAGTTGCCAAAAGTCAAAATCAAGTACAAGTTTGAAGTCCGTACGAAAATGGTTGTCCAATCAGTTTTTTTTGTTTGTTTGATAGTTTTTTGGTATTTTATTTTTTCCTTTTAATTTATCAAAAATTTGTTGACCGTACAATTTAATAATTACATGGTCTGCTAAGTAACTAATAATACACGTTTTTTTATTAAAAAAATAATAATATTACACGTTAATCATTTCTGCTATCTTTTTATATTTTATCTTGGCGACTCTATTTCAAAATAATGTGTCTTATTAAAATAAATTTAAAATAGTGTGTGGATTAGAATAGTTATTATTATTATTATTTTCGATAAGGGTGGACTAGAATGACTATTGAAATGATATAAATGTTATTAGAATATCATAAGGTTAGATAGTCTCGAGGGATAGTTTGGGTGACTTGAATATGTTTGAGTTATTGGCCTTAGGTAATAAAAAAAATCATAAGATTAGGTAAATAATTTTTGAGAAAATTTCTTTAATGGGCCATTTTATAGAAACCATATTTTATTTTCAAAGTTTTACATATTTGGATTCTCATATTTTAAATTTTCATTAATTTCAAGATTATCCTCTACTATTACTGTTTTACTTGATTAAATTTGTTCTTTATTTAAATGATTCATATTTCGATTTCAAATTTTTGGTCCATATCTTGGCCTCCCTTCTCATTTCTCTCGAAGCAAAGGTCTGGATTGGAATTTTCTAAAAGATAAGATCTGGAAAGTTATGCAAGGTTGGAAACTCAGCTTCTTCTCAGTGGGTGGAAAGGAGGTTCTATTAAAAAGTGTTGGTCAGACAATTCCGACTAATGCTATGAGCGTTTTTAGACTACCAAAAGGTTTCTGCGAAGAGGTTTCTCAAATGTTTGCTCGTTTTTGGTGGGGATCTTCGAACGATACAAAGAAGCTCCACTGGATGAGTTGGGAGAGAATGTGCCTTCCTAAAGAGTTAGGGGGCCTAAACTTCAGAGATTTGGAAGGCTTTAATCAGGCTTTGGTGGCCAAACAGGTCTGGCGTGTTCTTCAGAATCCAAATATCCTCGTTTCCAGAGTCCTAAAAGCAAAATATTTCCATGACTCATCAGTGCTCCAAGCGACTCACCTCCGAAATCAATCATATTTCTGGAAAGGTTTCATTTGGGGGCTGGACCTTCTAATCAAGGGGTTGCGTTCTAGAGTTGGCAATGGTTCGACCATTAATATCTTCTCAGATCCCTGGATTCTGCGACCCTATTCCTTTCGTCCTATCACAGCACCTTTTGGTCCTCATGATGTTAAAGTGGCAGACCTTATCAATCCTAATGGAAAATGGGACGCTTATCTAATCTCTAACATTTTTTGTGAGGAAGACAGAGATCTCATTCTATCGATGCCCGTTAGTCTATACGTTTCTGTTGACTCTTGGATTTGGCATTTTGACAAGAGAGGACACTACAGTGTTAAAAGTGGTTATAAAACTCTATATACATCAGAAGTGCAATGGTGTATCTACAAGTGCAGGCTCTAGGGGATATAATTGGAAGACTTTTTGGGAGCTAAAGGTTCCTTCTAAGATTAAGCTATTCCTATGGAAAGCAGGTCATAATCACATCCCAACAACCCAAAATCTTAGAAATCGTGGAATTGATGTGGTACCTGATTGTATATTTTGTGCTAAGATGGAAAGTACTTCTCACTCTATCTTCCTCTGCAAAAGGGCTAAGAAAATCTGGAATCTGATGTTCCCATCTCTCTTCACTTCTCCAATAAATGGAAATCTCAGTTTTATGGACATTTGGCTGCTTCTTTATGATAAACTAAATCCACAGCAGAGAGATCTTGCTGCTTTTACCTGTTGGGCAATTTGGTGTGATCGGAATTCTATGGCCCATGGTTCTTCTGTCTCCACCCCTGCTTTAAGGTGCAATTGGATTAGTTCCTATTTTCAGAATTACTCACAGGCTCAAGAAAACAAGAGAATCTCACCGCAGCAGAGCTCGGTCCCTCCCCCATTCTGTCGTTGGCTTCCTCCTTGCGACTCAGCTATGAAGGTGAACTCTGATGCAGCCTGCCGTTCTACATCAACAGGACTAGGTCTTATTATTAGAGACCATTTGGGGGTTTTGTTGGTAGCGAAATCACTGTTTCTGCCGATGCCATTGAACCCTCTTTTTGCTGAAATCAGAGGAATTTTGGAAGCTCTAAAGCTCGCTGCCTCACGGAGTTACACTCGCCTGGTTGTAGAATCTGATTGCCAAGAAGTCATTCGCCTCGTTCAAGGAGATCTGTTTTCGATGGGAGAAAAAATGAATTGGATTATGGAAATTTGA

mRNA sequence

ATGTCAGAGTGTCAGAGAGTCGTTAGAGCAACGTCAGAAGCTCTATCGAAGTTCATCTCTATAAGTAGAGACCCCGCCTCCCACGAAAGATACTTTAGACTTCACACATCTCATCCAAGCTTCATGGAATACGAGTTTGATCATTTTCATGATCAAATAGTTACTAAAGGGTTCATTTGCTCAGCAAGGCTTGCCAAAGTCGAGCCATATTTTACTGATCATTGGTTGACATTTTCAAAGGACGAGTCTACCTTGAAAAGTACCTGCAAGTGCAAAGCACCAAACATAATCTCAAACAAGGCACTGAGAATCAGGGGTGGTCGAAGAGCCATTGGAGCACTCTCGAAAGTCCTGTTGGGAGGGTTGCGTTCTAGAGTTGGCAATGGTTCGACCATTAATATCTTCTCAGATCCCTGGATTCTGCGACCCTATTCCTTTCGTCCTATCACAGCACCTTTTGGTCCTCATGATGTTAAAGTGGCAGACCTTATCAATCCTAATGGAAAATGGGACGCTTATCTAATCTCTAACATTTTTTGCTCTAGGGGATATAATTGGAAGACTTTTTGGGAGCTAAAGGTTCCTTCTAAGATTAAGCTATTCCTATGGAAAGCAGGTCATAATCACATCCCAACAACCCAAAATCTTAGAAATCGTGGAATTGATGTGGTACCTGATTGTATATTTTGTGCTAAGATGGAAAGTACTTCTCACTCTATCTTCCTCTGCAAAAGGGCTAAGAAAATCTGGAATCTGATGTTCCCATCTCTCTTCACTTCTCCAATAAATGGAAATCTCAGTTTTATGGACATTTGGCTGCTTCTTTATGATAAACTAAATCCACAGCAGAGAGATCTTGCTGCTTTTACCTGTTGGGCAATTTGGTGTGATCGGAATTCTATGGCCCATGGTTCTTCTGTCTCCACCCCTGCTTTAAGGTGCAATTGGATTAGTTCCTATTTTCAGAATTACTCACAGGCTCAAGAAAACAAGAGAATCTCACCGCAGCAGAGCTCGGTCCCTCCCCCATTCTGTCGTTGGCTTCCTCCTTGCGACTCAGCTATGAAGGTGAACTCTGATGCAGCCTGCCGTTCTACATCAACAGGACTAGGTCTTATTATTAGAGACCATTTGGGGGTTTTGTTGGTAGCGAAATCACTGTTTCTGCCGATGCCATTGAACCCTCTTTTTGCTGAAATCAGAGGAATTTTGGAAGCTCTAAAGCTCGCTGCCTCACGGAGTTACACTCGCCTGGTTGTAGAATCTGATTGCCAAGAAGTCATTCGCCTCGTTCAAGGAGATCTGTTTTCGATGGGAGAAAAAATGAATTGGATTATGGAAATTTGA

Coding sequence (CDS)

ATGTCAGAGTGTCAGAGAGTCGTTAGAGCAACGTCAGAAGCTCTATCGAAGTTCATCTCTATAAGTAGAGACCCCGCCTCCCACGAAAGATACTTTAGACTTCACACATCTCATCCAAGCTTCATGGAATACGAGTTTGATCATTTTCATGATCAAATAGTTACTAAAGGGTTCATTTGCTCAGCAAGGCTTGCCAAAGTCGAGCCATATTTTACTGATCATTGGTTGACATTTTCAAAGGACGAGTCTACCTTGAAAAGTACCTGCAAGTGCAAAGCACCAAACATAATCTCAAACAAGGCACTGAGAATCAGGGGTGGTCGAAGAGCCATTGGAGCACTCTCGAAAGTCCTGTTGGGAGGGTTGCGTTCTAGAGTTGGCAATGGTTCGACCATTAATATCTTCTCAGATCCCTGGATTCTGCGACCCTATTCCTTTCGTCCTATCACAGCACCTTTTGGTCCTCATGATGTTAAAGTGGCAGACCTTATCAATCCTAATGGAAAATGGGACGCTTATCTAATCTCTAACATTTTTTGCTCTAGGGGATATAATTGGAAGACTTTTTGGGAGCTAAAGGTTCCTTCTAAGATTAAGCTATTCCTATGGAAAGCAGGTCATAATCACATCCCAACAACCCAAAATCTTAGAAATCGTGGAATTGATGTGGTACCTGATTGTATATTTTGTGCTAAGATGGAAAGTACTTCTCACTCTATCTTCCTCTGCAAAAGGGCTAAGAAAATCTGGAATCTGATGTTCCCATCTCTCTTCACTTCTCCAATAAATGGAAATCTCAGTTTTATGGACATTTGGCTGCTTCTTTATGATAAACTAAATCCACAGCAGAGAGATCTTGCTGCTTTTACCTGTTGGGCAATTTGGTGTGATCGGAATTCTATGGCCCATGGTTCTTCTGTCTCCACCCCTGCTTTAAGGTGCAATTGGATTAGTTCCTATTTTCAGAATTACTCACAGGCTCAAGAAAACAAGAGAATCTCACCGCAGCAGAGCTCGGTCCCTCCCCCATTCTGTCGTTGGCTTCCTCCTTGCGACTCAGCTATGAAGGTGAACTCTGATGCAGCCTGCCGTTCTACATCAACAGGACTAGGTCTTATTATTAGAGACCATTTGGGGGTTTTGTTGGTAGCGAAATCACTGTTTCTGCCGATGCCATTGAACCCTCTTTTTGCTGAAATCAGAGGAATTTTGGAAGCTCTAAAGCTCGCTGCCTCACGGAGTTACACTCGCCTGGTTGTAGAATCTGATTGCCAAGAAGTCATTCGCCTCGTTCAAGGAGATCTGTTTTCGATGGGAGAAAAAATGAATTGGATTATGGAAATTTGA

Protein sequence

MSECQRVVRATSEALSKFISISRDPASHERYFRLHTSHPSFMEYEFDHFHDQIVTKGFICSARLAKVEPYFTDHWLTFSKDESTLKSTCKCKAPNIISNKALRIRGGRRAIGALSKVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCSRGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI

Homology

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BLAST of Moc08g35580 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 7.3e-109
Identity = 198/210 (94.29%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 233 MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCW 292
           ME TSH I LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFT W
Sbjct: 1   MEXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXW 60

Query: 293 AIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCD 352
           AIWCDRNS AHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPP CRWLPP D
Sbjct: 61  AIWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPSCRWLPPRD 120

Query: 353 SAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAAS 412
           SAMKVNSDAACRSTSTGLGLIIRDH GVLLVAKS+FLPMPLNPLFAEIRGILEALKLAAS
Sbjct: 121 SAMKVNSDAACRSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALKLAAS 180

Query: 413 RSYTRLVVESDCQEVIRLVQGDLFSMGEKM 443
           RSYTRLVVESDCQE IRLVQGDLFSMGE++
Sbjct: 181 RSYTRLVVESDCQEAIRLVQGDLFSMGEEL 210

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BLAST of Moc08g35580 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-75
Identity = 152/386 (39.38%), Postives = 211/386 (54.66%), Query Frame = 0


Query: 117  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLIS 176
            +L+ GLR RVGNGSTI  FSDPW+ RP +F+P+    G  D  VA  I  +G WD   IS
Sbjct: 1010 LLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWDVTSIS 1069

Query: 177  NIFCS-----------------------------------------------------RG 236
            + FC+                                                     RG
Sbjct: 1070 HSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRG 1129

Query: 237  YNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFL 296
              W + W+L VP+KIK+F+W++ H HIPT QNL  RGI  +P C  C  + ES  H+ F 
Sbjct: 1130 TQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFH 1189

Query: 297  CKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMA 356
            CKRA++IW  +FP L       N+SF+++W  L ++L P+  +LAA T W IW DRNS+ 
Sbjct: 1190 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1249

Query: 357  HGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA 416
            HG  VS    +C W++ +  ++SQAQ +      QS+  P    W P    ++K+N+DAA
Sbjct: 1250 HGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309

Query: 417  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVES 449
            CR  ST  G IIRD    L+ A S+ +P PL+PL AEIR ILE LK AA+ ++T L VES
Sbjct: 1310 CRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVES 1369

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BLAST of Moc08g35580 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-32
Identity = 111/388 (28.61%), Postives = 167/388 (43.04%), Query Frame = 0


Query: 116  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI 175
            +V+  G+R R+GNG  I IFSD W+ RP +FRPI     P    VADLI  + +WD   +
Sbjct: 951  QVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVADLIKADNQWDEIKL 1010

Query: 176  ---------------------------------SNIFCSRGYN----------------- 235
                                              N     GY                  
Sbjct: 1011 RQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALRSKFPDSTSCTEAS 1070

Query: 236  ---WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIF 295
               W   W L++P K+K+F+W+A +N +P+ +NL  R +   P C  C   +E+ SH++ 
Sbjct: 1071 HKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALL 1130

Query: 296  LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYD---KLNPQQRDLAAFTCWAIWCDR 355
             CK A+KIW     S F++P     +  DI+  L +   +L     +L    CW+ W  R
Sbjct: 1131 ECKAARKIW---LQSPFSAP-RLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAWYAR 1190

Query: 356  NSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQS----SVPPPFCRWLPPCDSA 415
            N          P +      S    + + ++     PQQS    S+      WLPP  + 
Sbjct: 1191 NKCIFDGRELNPIISAAKAESVLTAFQRVRK-----PQQSHISISIKEKQQEWLPPPQNV 1250

Query: 416  MKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAAS 441
             KVN DAA   ++ S G+G +IRD  G ++ A      +  +   AE   +L  L+LA +
Sbjct: 1251 FKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEAVLWGLQLARN 1310

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BLAST of Moc08g35580 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-31
Identity = 101/376 (26.86%), Postives = 159/376 (42.29%), Query Frame = 0


Query: 116  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI 175
            ++L  GLR RVGNG +I +++D W+  P  F+ ++ P  P    V DL   +G+W+  L+
Sbjct: 848  ELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLL 907

Query: 176  SNIFCSR---------------------------------GYN----------------- 235
             +IF  +                                 GY                  
Sbjct: 908  KDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRV 967

Query: 236  ------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSH 295
                  WK  W LK+P+KIK FLW+   + +P  Q L NR I   P C  C  K ES  H
Sbjct: 968  DLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLH 1027

Query: 296  SIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDR 355
            +++LC+ AK++W              N SF ++W  L    + +++ L A+ CW +W  R
Sbjct: 1028 AVWLCETAKEVWRNSAWGNVCEEWRVN-SFRELWHALQLSSSGEEQGLFAYLCWGLWNRR 1087

Query: 356  NSMAHGSSVSTPALRCNWISSYFQNYSQAQE-NKRISPQQSSVPPPFCRWLPPCDSAMKV 415
            NS        T     + ++   Q +S A   +  I  +QSS   P   W PP     K+
Sbjct: 1088 NSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGIYKI 1147

Query: 416  NSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSY 432
            N D A +S  +  G+G+++R+  G  + A    +         E+   +E L+ A    +
Sbjct: 1148 NVDGAVKSGDSVRGVGVVVRNANGEFMAACVRRIQASYGARQTELMATIEGLRFAIDMGF 1207

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BLAST of Moc08g35580 vs. NCBI nr
Match: RHN55891.1 (putative RNA-directed DNA polymerase [Medicago truncatula])

HSP 1 Score: 146.4 bits (368), Expect = 6.1e-31
Identity = 104/375 (27.73%), Postives = 164/375 (43.73%), Query Frame = 0


Query: 109 RAIGALSKVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPH-DVKVADLINPN 168
           R++ +   +L  G R ++G+GS IN++S PWI    + +P T P   H D+ V+ L+N +
Sbjct: 305 RSLWSTQSLLTLGHRWKIGDGSQINVWSMPWIRNLPTLKPSTPPLLHHADLTVSYLLNSD 364

Query: 169 G-KWDAYLISNIF----------------------------------------CS----- 228
           G  W+  ++ ++F                                        CS     
Sbjct: 365 GNSWNIPIVQSLFNSVDAEAIVSMPLFPRTATDQRIWKATANGSYTVKSAYRLCSDLITA 424

Query: 229 -----RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM-ES 288
                  Y W + W L++P +++ FLW+   + +PT  NL  RGI     CIFC +  E+
Sbjct: 425 INPIQHDYRWNSIWNLQIPPRVRAFLWRLAQHCLPTRANLLTRGIPCDDSCIFCDQFAET 484

Query: 289 TSHSIFLCKRAKKIWNLM-----FPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFT 348
            +H  F+C +A   W L+        L  S  +    F D    L D+L+PQQ+ L A T
Sbjct: 485 QTHVFFVCPKASSCWELLGVNHIIRDLLLSSNDCTSMFFD----LIDRLHPQQQVLVAMT 544

Query: 349 CWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPP 408
            W++W  RNS    ++ +TP             +S  Q  K      +SV      W+ P
Sbjct: 545 LWSLWKSRNSKLWEATDTTPISIVTRAKDVINEWSCMQREKAPIHHANSVH----SWIKP 604

Query: 409 CDSAMKVNSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALK 424
               +K N DAA  + ++  G G+  RD+ G  L+ KS F       L AE   +L+A+K
Sbjct: 605 PIGTIKCNVDAAAFNNNSIMGYGMCFRDYTGTFLLGKSDFHHSSATVLEAESLALLDAIK 664

[Close]

BLAST of Moc08g35580 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 3.5e-109
Identity = 198/210 (94.29%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 233 MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCW 292
           ME TSH I LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFT W
Sbjct: 1   MEXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXW 60

Query: 293 AIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCD 352
           AIWCDRNS AHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPP CRWLPP D
Sbjct: 61  AIWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPSCRWLPPRD 120

Query: 353 SAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAAS 412
           SAMKVNSDAACRSTSTGLGLIIRDH GVLLVAKS+FLPMPLNPLFAEIRGILEALKLAAS
Sbjct: 121 SAMKVNSDAACRSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEALKLAAS 180

Query: 413 RSYTRLVVESDCQEVIRLVQGDLFSMGEKM 443
           RSYTRLVVESDCQE IRLVQGDLFSMGE++
Sbjct: 181 RSYTRLVVESDCQEAIRLVQGDLFSMGEEL 210

[Close]

BLAST of Moc08g35580 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-76
Identity = 152/386 (39.38%), Postives = 211/386 (54.66%), Query Frame = 0


Query: 117  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLIS 176
            +L+ GLR RVGNGSTI  FSDPW+ RP +F+P+    G  D  VA  I  +G WD   IS
Sbjct: 1010 LLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWDVTSIS 1069

Query: 177  NIFCS-----------------------------------------------------RG 236
            + FC+                                                     RG
Sbjct: 1070 HSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRG 1129

Query: 237  YNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFL 296
              W + W+L VP+KIK+F+W++ H HIPT QNL  RGI  +P C  C  + ES  H+ F 
Sbjct: 1130 TQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFH 1189

Query: 297  CKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMA 356
            CKRA++IW  +FP L       N+SF+++W  L ++L P+  +LAA T W IW DRNS+ 
Sbjct: 1190 CKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLI 1249

Query: 357  HGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA 416
            HG  VS    +C W++ +  ++SQAQ +      QS+  P    W P    ++K+N+DAA
Sbjct: 1250 HGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309

Query: 417  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVES 449
            CR  ST  G IIRD    L+ A S+ +P PL+PL AEIR ILE LK AA+ ++T L VES
Sbjct: 1310 CRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVES 1369

[Close]

BLAST of Moc08g35580 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.8e-36
Identity = 108/389 (27.76%), Postives = 169/389 (43.44%), Query Frame = 0


Query: 116 KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKW----- 175
           +V++ G+R R+G G  + I+   WI RP +F+PI+AP    D  VA+LI+ N KW     
Sbjct: 161 QVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKPISAPTLGMDCTVAELIDENQKWKESLI 220

Query: 176 -------DAYLIS---------------------NIFCSRGY------------------ 235
                  DA LIS                     N     GY                  
Sbjct: 221 QQHFNFEDAELISRIQLPISPKPDQILWHYDKKGNYSVKSGYQIAMRIKHPARPSSSSSN 280

Query: 236 --NWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIF 295
              W   W L++P KIK+F+WKA  N +PT++NL  R +   P C  C  K E  +H+I 
Sbjct: 281 LGQWNVIWSLELPEKIKIFMWKAARNFLPTSENLWRRKMVQEPICPRCKMKKEDINHAIM 340

Query: 296 LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSM 355
           +CK AKK+W L  P +    +  N   + +   L ++ +  +  L    CW  W  RN  
Sbjct: 341 VCKAAKKMWKLT-PFVEEMQLLDNQDLLSMLQELVNRRSKDELRLIIALCWTAWHTRNIF 400

Query: 356 AHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDA 415
              +    P +      +  ++Y++ +  K +     ++P    +W+PP     K N DA
Sbjct: 401 VFENKRQDPQISVAKAEAVVESYARVRMTK-VQAAAKAIPAKGAKWIPPPQGHFKANVDA 460

Query: 416 AC--RSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLV 449
           A        GLG++IRD  G +++A         +   AE   +   L++    S + L+
Sbjct: 461 AVNKEKNQVGLGVVIRDDSGAIIIAAVNHTKYHGDVAQAEAAAVNFGLQVVMEASLSPLI 520

[Close]

BLAST of Moc08g35580 vs. ExPASy TrEMBL
Match: A0A803NHG3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-35
Identity = 106/380 (27.89%), Postives = 155/380 (40.79%), Query Frame = 0


Query: 116  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI 175
            +++L G R RVGNG  + +  DPW+ RP SF+    P  P  + V DL +P+G WD   I
Sbjct: 1354 EIILKGYRWRVGNGQQVRVLEDPWLPRPTSFKVYDKPPFPQQLCVVDLTHPSGVWDESFI 1413

Query: 176  SNIF---------------------------------CSRGYN----------------- 235
               F                                    GY                  
Sbjct: 1414 RANFNREDAEMILRLPPLHEDLEDKVMWHYSRNGEYTVRSGYRMAAEIRKSEATLEGQLM 1473

Query: 236  ---WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAK--MESTSHSI 295
               W+  W+LK+P K+K F WK  ++ +PT  NL  R +   P C  C+    E+  H++
Sbjct: 1474 KDWWRKLWKLKLPPKVKHFAWKLANSWLPTHSNLVTRKVMTDPTCHRCSNGVRENIFHAL 1533

Query: 296  FLCKRAKKIWNLMFPSLFTSPI--NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDR 355
            + C   K IW L   S F + I   G    +   + L   +N    +     CW +W  R
Sbjct: 1534 WGCSANKGIWKL---SGFKAEIQRKGGEDVLAFLMRLARGMNQDSYEFFLVLCWQVWYLR 1593

Query: 356  NSMAHGSSVSTPALRCNWISSYFQNY-----SQAQENKRISPQQSSVPPPFCRWLPPCDS 415
            NS  HG  +  PA    W   Y   Y      Q ++ +R   QQS       RW PP   
Sbjct: 1594 NSTKHGGRLPQPAEVVEWCGQYLLEYKQPVLEQGRQGQRQRVQQS-------RWTPPRQG 1653

Query: 416  AMKVNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAA 432
             +K+N D   R     + +G ++R+  G  + A +  LP   +PL  E++ I   L+   
Sbjct: 1654 DVKINVDGGVRKGGGCSSVGCVVREASGSCVFASATVLPCEASPLRVELQAIQLGLQTGI 1713

[Close]

BLAST of Moc08g35580 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.8e-35
Identity = 104/378 (27.51%), Postives = 164/378 (43.39%), Query Frame = 0


Query: 116 KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI 175
           K++L G R RVGNG ++ +  DPW+ RP +F+    P  P ++ V DL   +G+WD   I
Sbjct: 263 KLILKGYRWRVGNGESVRVLEDPWLPRPVTFKVYDQPSLPANLYVTDLKLADGQWDEGFI 322

Query: 176 SNIF------------CS---------------------RGYN----------------- 235
            +IF            CS                      GY                  
Sbjct: 323 RSIFNPTDVDLILGIPCSDWDFEDKILWHYSKYGEYSVKSGYRMAASFTTEQHQSNEHSI 382

Query: 236 ---WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM--ESTSHSI 295
              WK  W LK+P K+K F+WK  HN +P   NL  RGI     C  C+    ES +H++
Sbjct: 383 VQWWKKLWRLKIPPKVKHFVWKVAHNWLPANVNLAKRGIASSVVCSRCSSHVDESVAHAL 442

Query: 296 FLCKRAKKIWNL--MFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDR 355
           + CK +K  W +  ++  L       NL+ +      +DK   ++ +      W IW  R
Sbjct: 443 WECKASKGYWRVSGLYDDLKQMLGEDNLTMLMRIAAEWDK---EKLEFFLLVSWNIWNVR 502

Query: 356 NSMAHGSSVSTPALRCNWISSYFQNY--SQAQENKRISPQQSSVPPPFCRWLPPCDSAMK 415
           N++ HG     P     W  ++  ++     +E  + S + S       RW+PP    + 
Sbjct: 503 NTVVHGGYHPKPEEMIEWCGNFLADFRGDTGRERSQRSSEDS-------RWVPPARDQVT 562

Query: 416 VNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRS 433
           +N DA  +     +GLG ++RD  GV+L A +  L   L PL  E+  I + +++   + 
Sbjct: 563 INVDAGVKQGGLISGLGYVVRDAAGVVLSAAATVLQQELPPLQLELMAIKKGIQVGIQQR 622

[Close]

BLAST of Moc08g35580 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-21
Identity = 74/256 (28.91%), Postives = 119/256 (46.48%), Query Frame = 0


Query: 190 WELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKK 249
           W L +  K+K FLW+A    + TT+ L  RG+ + P C  C  + ES +H++F C  A  
Sbjct: 163 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 222

Query: 250 IWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRD----LAAFTCWAIWCDRNSMAHG 309
            W L   SL  + +  N    +I  +L    +    D    L  +  W IW  RN++   
Sbjct: 223 AWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFN 282

Query: 310 SSVSTPALRCNWISSYFQNYSQAQENKRISPQQS-SVPPPFCRWLPPCDSAMKVNSDAAC 369
               +P+       +   ++  A ++ + +P  +  +      W  P  + +K N DA  
Sbjct: 283 KFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGF 342

Query: 370 ---RSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVV 429
              +  +TG G IIR+H G  +   S+ L    NPL AE + +L AL+    R YT++ +
Sbjct: 343 DVQKLEATG-GWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFM 402

Query: 430 ESDCQEVIRLVQGDLF 437
           E DCQ +I L+ G  F
Sbjct: 403 EGDCQTLINLINGISF 417

[Close]

BLAST of Moc08g35580 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-09
Identity = 67/261 (25.67%), Postives = 110/261 (42.15%), Query Frame = 0


Query: 197 KIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKKIWNLMFPS 256
           KIKLFLWKA    +P    L  R I    DC  C   E+++H +F C  A ++WNL    
Sbjct: 3   KIKLFLWKAAAGALPVGAQLVRRHISSTWDCARCGAPETSTHMLFHCDFAAQVWNLAPLQ 62

Query: 257 L----FTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSM----AHGSSVS 316
           L      +PI   L+ +   ++L   +      L  + CW IW  RN +    +H S + 
Sbjct: 63  LGHIPIGTPILEALNLLKKTIVL-PPVGIHTATLFPWICWHIWKARNQLIFQNSHFSVIE 122

Query: 317 TPALRCNWISSYFQNYSQAQENKRI-SPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTS 376
           T   +    +  +Q+   A    R+ +P+ +S       +L   D+A +  S  A     
Sbjct: 123 T-VTKAVQDALAWQSAQLALPKVRVATPRPNSTTTLTHDFLCYVDAAWQQQSSLA----G 182

Query: 377 TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEV 436
           +G       H    +   S       +PL AE   I  A+  A     + L+V SD + +
Sbjct: 183 SGWVFQATSHSEKEITTFSAGCRRFPSPLAAEAWAIKSAMLHALQLERSDLLVLSDSKSI 242

Query: 437 IRLVQGDLFSMGEKMNWIMEI 449
           +  +  ++ S+ E    ++EI
Sbjct: 243 VDALNSNV-SLNEIFGLLVEI 256

[Close]

BLAST of Moc08g35580 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.9e-08
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 185 NW-KTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLC 244
           NW    W LK+  KIKL +WKA +N +P    L +R I + P C  C   E+ +H +F C
Sbjct: 4   NWIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDFETITHILFNC 63

Query: 245 KRAKK 249
             A++
Sbjct: 64  PFAQR 68

[Close]

BLAST of Moc08g35580 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-07
Identity = 55/220 (25.00%), Postives = 94/220 (42.73%), Query Frame = 0


Query: 227 CIFCA-KMESTSHSIFLCKRAKKIWNLM-FPSLFTSPINGNLSFMDIWLLLYDKLNPQQ- 286
           C+ C    E+ +H +F C  A+ +W +   P+        +L     W+L  +   P+  
Sbjct: 12  CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLG 71

Query: 287 --RDLAAFTCWAIWCDRNS-MAHGSSVSTPALRCNWISSYFQNYSQAQ--ENKRISPQQS 346
              +L  +  W +W  RN  M  G     P +    +   F+ +S  +  E K   PQ  
Sbjct: 72  KIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMED-FEEWSTRRELEGKASGPQVE 131

Query: 347 SVPPPFCRWLPPCDSAMKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPL 406
                  +W  P    +K N+DA     +   G+G I+R+  G +L   +  LP   N L
Sbjct: 132 R--NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVL 191

Query: 407 FAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLF 437
            AE+  +  A+   +  +Y R++ ESD Q ++ L+  D F
Sbjct: 192 EAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDF 228

The following BLAST results are available for this feature:

BLAST of Moc08g35580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131661.1	7.3e-109	94.29	uncharacterized protein LOC111004786 [Momordica charantia]	[more]
XP_022158377.1	1.1e-75	39.38	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_024950112.1	1.1e-32	28.61	uncharacterized protein LOC112496847 [Citrus sinensis]	[more]
VVA32947.1	2.1e-31	26.86	PREDICTED: retrotransposon [Prunus dulcis]	[more]
RHN55891.1	6.1e-31	27.73	putative RNA-directed DNA polymerase [Medicago truncatula]	[more]

BLAST of Moc08g35580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g35580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQ49	3.5e-109	94.29	uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1DX30	5.1e-76	39.38	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A1S8ACU2	8.8e-36	27.76	Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1	[more]
A0A803NHG3	5.7e-35	27.89	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QQT2	9.8e-35	27.51	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Moc08g35580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	1.2e-21	28.91	Ribonuclease H-like superfamily protein	[more]
AT1G10000.1	5.3e-09	25.67	Ribonuclease H-like superfamily protein	[more]
AT3G26855.1	5.9e-08	38.46	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G34320.1	1.3e-07	25.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 184..250 e-value: 7.2E-17 score: 61.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 353..447 e-value: 1.9E-7 score: 33.2
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 358..434 e-value: 1.4E-12 score: 47.5
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 101..426
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 101..426
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 357..448 e-value: 6.18374E-17 score: 74.658
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 355..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g35580.1	Moc08g35580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity