Moc08g17790 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g17790
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr8: 13471760 .. 13479824 (-)
RNA-Seq Expression	Moc08g17790
Synteny	Moc08g17790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGGGATGATAAATTGGTCACTTTTAATGTATCAGATTTTTCATTTTGGAGAAATCAAGTATTAAATTATTTGCACTCGAAAGAGTTGGAATTGCCATTAGAAAAAAAACCAGATGATATGGGAGAAAAAGAATGGAAGAAGTTGGACAGGAAAGTGTTGGGTACGATTCGCCTAACATTAACAAAAAATGTTCAAAGCAGAGTGGCGAAGGAGACGACCACATTGGGGTTAATGAATGCCCTGACCAACATGTATGAAAAACCCTTGGTAAATAGTAAGGTTTATCTCGCAACTAAATTTTTTAATTTGAAAATGGCTGAAGGTACATCTATTACTGCCCATTTAAATGAGTTTGACGAGTTGATTAATAAACTGTTAGCTGTTGATTTAGAATTCAGTGATGAAGTTTATGCTATTTTGTTGTCAAGATCTTTGCCTGATAGTTGGGAACTCATACGATCTGCTATTTTGTATTCTTGTGGGAAAGAGAAATTGAAATTTGAAGATGTTAGAGATGCAGCTCTTGCTGAAGAAATTCGCAAGAAGGACTCTAGTATCACTTCTACTTCCGGTTCAGCATTGAATGTGGACAGAGGAAGAAATAATAACGAGGTTATGGGAATCAAGGCAACTTGAAAAATAATAGAAGCAGGTCCAGAAACAGCAGGTTTAAGCGTTGGAATTGTGTTAAGACTAGACACTTGAAGAGGACTTGAAAGGCCCCAAAGAAAAATGAAGGGAACGAAGTCGGTGCTAATGTTGCTGAGCAGATACATATGATGCTCTGGTTCTTGTAGTTGAGAGCGCTCATGACACAGGGGTGATGGATTCACGTGTGCCTTTTCATACTACATGACAACATGACATTCTTGAAAATTATATTGTAGGAAATCATGGAAAGGTCTATCTTGGAGATTGAGAGCCTTTGGGTATCATTGGTATCGGTGATGTGAATTTAAAAATGGCGAATGGTTCAGTTTGGAAAATTCGCAAGCTATGCCACATTCAGAATATGATGAAAAACTTGATTTTGGTGGGGCAATTGGATAATGAAGGATGTGAAATATCCTTTGGGCAAGAAAATTGGAAAGTTACAAAGGGTGCCATGGTGATTGCTTGAGGAAGTAAGTCAGGAACTTTGTATGCTAACAGCAATGATAAGGATATGGTGACTGTTGTAGATCATTTGAGCCAGACTCAATTATGGCATAACAGACTGAGACATATGAGTGAAAAAAGGTATGAAAATTCTTCACTTTGTAGGGAAGTTACAGGGCCTTAAGGCAGTTGACCACAAGCTGTGTGAAGGTTGTGTATTTGGGAAGCAGAAGCGTGTCAGTTTCTCAAAACAAGTGCAGCACTAAAGCCTACGAAATTGGAGCTGGTTCACACTGATGTGTGGGGGCCTTCTAAAGTTTCTTCTATTGGAGGTTCTAGATACTATGTGACTTTTATAGATGACTCAAGTAGGAAGGTATAGACTTATTTTCTCAAATACAAGTCTGATGTATTTTCTGTTTTCTAAACTTGGAAGGCTATGGTTGAGAATGAGACAGGTCTAAAAATTAAAAGCTTGAGGTCAGACAATGGTGGTGAGTATGTTGATGGGGAATTTAAAAAGTATTGTGCATACAACGGAATTGTGGTGGTAAAGACTATTCCAGGGACACCACAGCAGAACGATGTGGTCAAGAGAATGAAAAGGACGTTGAATGAGCGTGTCAGGAGCATAAGATTACATGCGGGATTGCCTAAGATGTTCTGGGCAAAGGTAATCAACACTCGACTTATCTGATCAATAGGAGCCCAACCACATCACTAGACTTCAAATTGCCTGAAGAAGTCTGGAGCGGTAAACAGGTAAACCTTTCTCATTTAAAGGTTTTCGGCTGTGTATCTTACCTTCACATTGATGCTGCAGACGAGAGCAAACTGGATGTTAAATCCAATAAGTGTTATTTTCTTGGTTATGACGGAGCTGAGATTGGCTATAGGTTTTGGGATGAGCAGACAGGTAAATTATGAGAAGCAAGAACATAATCTTTAATGAGGATGTTCTGTACAAGGATAGAGCAAATGATGAATCTGGAAAGTCAGAGTCAGATGGAAGTACATAAGATATTACTAGGTACATTAGTCTTCCCATAGTTGAGACCAAGACAACAAGAATTGAAGATCAGAGTACAACTACTCCGGAGGAAACAGTTGTGGAATCTGAGGAACAGGTTGTTGAACCTGATGGACCAGTTATGGAAACTGAAGAAGTTCAGAGAACGCCACCTACAGTAGTGAGAAGATTTAGCAGAACTATTAGACCACCATAGAGGTATTCTTCTACTCTGAATTATATATTATTGACTGACAGAGGTGAACCTGAATGTTATGAAGAAGCAGTTCAGTTGAAAGATTCTTTCAAGTGGGAGTTAGCCATGAAAGATGAGATGAATTCTCTTATGACAAATCAGACATGGCAACTTACTGAGTTACCAAGAGGTAAGAAAGCTTTGCAGAACAAATGGGTGTATAGAATCAAACAGGAGCCCGATGGCAGCAAAAGATATAAAGCAAGACTTGTAGTCAAAGGCTTTCAACAAAAGGAAGGTACTGACTTTAATGAAATTTTTTCTCTAGTAGTTAAACTAACTACCATTAGAACTGTATTATCAATAGTGGCATAAGAATATTTGTTTCTGGAACAAATGAATGTAAAAACAGCTTTTCTTCATGGTGATTTGGAGGAAGAAATTTACATTGAGCAGCCACAGGGATTTACAGTACAGGGGCAGGAGAAAATGGTTTGTAAACTTCAGAGAAGTTTGTATGGTCTCAAACAGGCTCCCAGACAATGGTACAAGAAGTTTGACAGTTTTATATGCAATAATGAATTTCAGAGGTGCTAGGCAGATCATTATTGCTATATAAGAACTTAAGGTAACTCTTCTATTATTTTATTGTTATATGTTGATGATGTGTTAATAGTAGGACTGAACAAACAGAAAATTCTAAAGATAAAGGTTGAATTATCTGGAGAATTTGATATGAAAGATTTGGGAGCTGCCAAACAAATCCTAAGGATGAGGATCGAGAGAAAAGATGGTACATTGACATTGTCACAGGAAGAGTATGTAAAAAAACTGTTAAACATATTTTACATGAGATATGCAAAACCTGTGAGTACTCCTTTAGCTTGTCATTTTAAATTATCTAAGGAGCACTCACCCATTACTGAGCAAGTGAGAGATTATATGGCTAGAGTGTCATACACTTCAGCTATAGGTAGCCTGATGTATGTCATGGTTTGTACAAGACTAGATATTGCACATGCAGTGGGAGTTGTTAGCAGGTATATGAATAATCCAAAGAAGCAGCACTGGGAGGTTGTGAAGTAGATCTTTAGATACTTGAGAGGAACAACTGACTATGCTCTACACTTTAAAAGGTCGGATTTTAAATTTCAAGACTATGTTGATACAGATATGGTAGGTGATACAAATGGCAGAAAAAGCACTACTATGTATGTATTTACTTTGGGTAATACTGCTATTAGTTGGGTTTCTAGATTGCAGAAGATAGTAGCACTTTCTACTACAGAAACTGAGTATGTTGCAGTTACTGATGCAAGTAAAAAGATGATATGGCTTCAGTCATTTTTAGAAGAACTTGGCTTGAAATTGGGAAAAAGAAATTTGCATTGTGACAGTCAGAGTGCTATTTATTTAGTAAAGAATCATGTATTTCATTCGAGAACAAAACACATACAGGTGAGGTACCATTTTATAATATCAGCTTTGAAAGATGGGGTGCTGGTGCTTGAAAAGATTCCAAGAAGTTAAAATCCAACCTATATGTTTACCAAGATTGTCCCTGTTGATAAACTGAAGTTGTGTGCAACTTTAGTTGGACTTCTCCACGAGTAGAGAGGAGTCACTACCGTTGCAGAGGAGACGTGATGCTTGTTTTGTCTCCAAGTGGGACATTGTTGAGAATGGAGCCAAAAGAAAATGGTTATTGGGTCTAATGATGCCAGAGCCCAATACCCCACCAAAATTACTTCTCCTTTTTAGCTTAGTTGTTCTTTTTTTTTTGTAATTAAATTTATGTATCCGCCGCCCCATTTTTAACAACTCCAAAAGAGAGAATTTAGTGTGAGATTTACTTTTACATAAAGAGGGTCTTGTGTTTGTGAGGGGTGGGTTTCTTTCGCAAGAAACTTACAGGGAGCTTTATGAGTGATTTTTTCATGTGAGAAAATATTTCAATCTCCATTGAAGAGTTTCAGGAAGCTTGAAAAGTGATTTGTGAGCATTTTTCTTTGAGAGAAAAGTGAGAGAAATCATTGTAGAGCGTTTATAAACTCTTGCAGATTCTCCTAGCATTAAGTGGAACCTCCAACTGTAGCAGAAAACTAGACGTAGCCCAGATTGGGTGAACCAGTATAAATCTGGTGTCGATAGATTTCTCTTCCCTATATTTTATTGTTCTTGTTGCTTGAGGTTTAGGTTGGTTTATCTACTCTTTGAGCATAGTTTCGATTTGATTTAATTCTGTTATAATTGGAACCAGAACTTGGTCTGAGATTAGTTAGCATATATTTGTCTGGAATTGTGATGAGATAATAATTTGTTAGAATATTCGTGGTATGGAGAATCCACGGACATTCAAGGAAGTGCACAAACTGGTGTAAGAGCATAAACCCCAAGTTTTGTTCTTTTGTGAAACAAAAGTTAGTGAAAATGCCAGTCGTCGTAAACAAATTGAGTTGGATTTTCACAATGGTTTTGTTGTAAGTTGTAAGGGTCGAAGTGGGGGGTATATGTATGTTCTTGAATGATGATATTGATATTGTGGTTTGCAGTTATAATTCTTTCTACATTGATTCTATTGTTTCGACTGACGAAGGCATTTGGAGATTCACAGACTTCTACAGGGAACCTGAGTTATCAAAAAGGAAATTATCTTGGGATCTCCTTCGAAGATTACATGTGAATCAGAATTTGCCTTGGCCGGTAGCTGGGGATTTTAATGAAATTCTAAAAAATTCAGAAAAGGTCGGTGGGCCTGATAGACCTCCTTGGGCAATCCGACAGTTTCAGGAGGCTTTAGTGATTGTGACTTGTGTGATTTGGGATATAAAGGCTACATCTTTACGTGGATCAACAACCGAAAATGAGATGATCTTACCAAAGTTCGTTTGGAATTTGCAATACTATTTTCTTAAATATCTTTCCAAATACTATAGTCAGCAAACTTGAGTTCTCCATGTGTCCGATCAAGATCTCAATTTGGAAGTGGGCCTATTATCCTAGAATACCTCAAAGCAGACAACACCGTTTTGAGTTGGTTTGGTGTGTTCGTGAGGATTGTGAAACAAAGGTTTGGAAAGGTCAGGAGCTTGGACGGAATTTGAGTCTCTCTAAGAGGCTAGATGGTTGTCTCCATCATTTGTCCAAATGGGGATCCAAACAAAAGGCGGATCCTGGAACAACTCTTAAGAGACTCCAATCCAAACCTGGAACAACTATTAGAGACTTCAATCCGCCATCGCCCAGAATACAGATGTCACTAGTGAAAGGCGAATCTCGGAACAACTCTTGGACGAGGAGGAGATTTATTGGAAATAGAGAAGTCGGATTGACTGCCTCAAATGGGGTGATAGAAATACGGCGTGGTTTCATAGGAAGGCGACACAACGGAAAAAGAAGAATAGAATGGATGGAATTTTTCACAGGAATAATCCGTGGATTTATAATATGGATAAAATGGAGGAAGTGGTATCTGATTACTTCCAAAACCTCTTCTACTCTCAATGCCATCGTAGTGAAGAGGAGCTCTCTAGTTTTTACAAGGAGCTGATTCCTTCCATTACTGAGGATATGAACAAATCGCTTTGTGCAGAATATACGAAAGAGGAAATTGAGAGGACCGTCAGACTTTTGAACTCCTCCAAGGCCCTGGGGTGGATGGTCTCCCTTCATTTTTCTTCCAAAAATATTGGCATTTGGTTGGGGAGGAAGTAACTAATTCATGTTTGAACATCCTAAATAATGGGGCTTGTTTAGGAGATCTCAATCACACTGCCATTGTTTATTCTAAAGGTGAAAGTTTCAAAATATGTGGAAAATTATAGTCCTATAAGTCTGCAATGTGGTTTACAAAATCATGTCCAAGACTATAGCAAACATGCTGAAATTGATTTTAGAGGTTATTATTTCTCCAAACCAGAGTGCTTTTGTACCAGGCAGATCGATTATGGATAATGCCATCTTGGGGTATGAGAGCGTGCACTGTATTAAAACTAAAAGGAGCAGCAAGAAAGAGTGGGCGACTCTAAAGCTTGATATGAGCAAGGCGTATGATCGAGTGAATGACCTTTCCTCAATAAATTTTTAATGGCTTTGGGAATGGACCTAAAGTGTGTGGAGCTTATTATGAGCTACGTGACTTCAGTTTCTTACACCTTTATTATTAATGGGGAGAAAAGAGGTTTCATTCGACAGACAGGGGCATTCGCCAATGTGATATTATCTCTCCTTATCTTTTTCTTTTATGGGTAGAGGCTCTTTCGAGGATTATGGATTCTTTACAGCATCATAATGCAATTGAAGACTTGCACATTGCTAAAGACAGCCCTCCGATCACACACTTATTTTTTGCGGATGATAGCCTCCTGTTCTTTGAGGCAAGTCCTTCTAAGACAGAAGCCATTGCTCGGGGGCTAGCGCTTTATTCTAAGTTGACTAGTGATCAAGAGATTAATATTCAGAAATCAGCAGCCTGTTTCAGCCCAAATACCTCTCAAGATGATGCGGATTATGTGATCCAGACCCTCAGAGTATCGAAAGTGGCATGTCATAAGCGGTATTTAGGCCTACCCTCCTCTCTACTATTAAGGAAGAAAAAGGCTTCATTCAAAGATCGAATTTGAAAATATCTACAAGGTTGGAAAGGTCGTTTCTTCTCAGTCGGGGGTAAGGGAATCTTTATAACACTACTAGAAATTCGGTCTACCGTGACGTTTTTTTGGCGTCACAAAAAGCTTTCGTGACGTTTTTAACGCCGTGACGTATACGCCCATCACGAAAGGTATACGAGACGTTTAAAAAACGTCACAAAAATTAGCACACGTGACGGTTTATTAGCGTCATGAAAGACATGGACTACCACGACGTTCATAAACCGTCATGAAAAATGATTTCGTGACGGTTATAGAATGTCACGGAAAGACATGGAACAGGGGAGGAGAGGTCACGTGACATCCTTTCGTGACGGTGTTTAAACGTCACGAAAAGTGTATTTCGTGACGGTGTTTAAACGTCATGAAAAGTTTATTCCGTGACGTTTGATAATAGTCCTAAAAAATATTTTGGTGACGGTTTAAAAACGTCACTAATGATTTTATTTTGTGACGATAAAAAGAGGGTCACTGAATATGTATTTAATTTTGATTGCAGATGTCGCGGAATATAAATATCATATTGTCAACTTGTCGATCGAACACGCAAATATATTAATTTACCATAACAAAGTTGAAATATATTAAACATGAACAAGGAAGCTAATATATTAATTTAGAATGTACTAGTATTCTCAAACACAAATTACAGAATTACAGAATTAAACATGTTTCGTACACACCAACCCCAACAACGATGCTCAGCCACCAATTAGTTGCATTCCTAATTGTCGACATCTTTGGTGTAAGAAAGACCTAATGAAAAAACAATACCCAAGTTAGATAAATGACGAACGAAAGATAGATAAGGTTAAGGAAAGTCACTTTCTAAAAAACATGTCTATCTATTAAAAATGACAAATGACCGTGATATTTGCAAATAACATTCTTAAATAAACAAACTAAGAGCCTATCACAATAGTATTGTTTGCAAATACTATTCCAACGTTACAAAATTGATTAAACAAAAACCAACCTACGTACATATCTTCTATATCTTTAGTAATATCGTATAACGTAATACCCACATTATGTTGATCCAGGTTGTTTTGGACACTATGCATACAACAAGACATGAATGTTGATGAGCATCCATTGCTTCTATGA

mRNA sequence

ATGGCAGGGGATGATAAATTGGTCACTTTTAATGTATCAGATTTTTCATTTTGGAGAAATCAAGTATTAAATTATTTGCACTCGAAAGAGTTGGAATTGCCATTAGAAAAAAAACCAGATGATATGGGAGAAAAAGAATGGAAGAAGTTGGACAGGAAAGTGTTGGGTACGATTCGCCTAACATTAACAAAAAATGTTCAAAGCAGAGTGGCGAAGGAGACGACCACATTGGGGTTAATGAATGCCCTGACCAACATGTATGAAAAACCCTTGGTAAATAGTAAGGTTTATCTCGCAACTAAATTTTTTAATTTGAAAATGGCTGAAGGTACATCTATTACTGCCCATTTAAATGAGTTTGACGAGTTGATTAATAAACTGTTAGCTGTTGATTTAGAATTCAGTGATGAAGTTTATGCTATTTTGTTGTCAAGATCTTTGCCTGATAGTTGGGAACTCATACGATCTGCTATTTTGTATTCTTGTGGGAAAGAGAAATTGAAATTTGAAGATGTTAGAGATGCAGCTCTTGCTGAAGAAATTCGCAAGAAGGACTCTAGTATCACTTCTACTTCCGGTTCAGCATTGAATGTGGACAGAGGAAGAAATAATAACGAGGCCCCAAAGAAAAATGAAGGGAACGAAGTCGGTGCTAATGTTGCTGAGCAGATACATATGATGCTCTGGAAATCATGGAAAGGTCTATCTTGGAGATTGAGAGCCTTTGGGTATCATTGGTACATTAGTCTTCCCATAGTTGAGACCAAGACAACAAGAATTGAAGATCAGAGTACAACTACTCCGGAGGAAACAGTTGTGGAATCTGAGGAACAGGTTGTTGAACCTGATGGACCAGTTATGGAAACTGAAGAATTGGACTTCTCCACGAGTAGAGAGGAGTCACTACCGTTGCAGAGGAGACGTGATGCTTGTTTTGTCTCCAAGTGGGACATTGTTGAGAATGGAGCCAAAAGAAAATGTTATAATTCTTTCTACATTGATTCTATTGTTTCGACTGACGAAGGCATTTGGAGATTCACAGACTTCTACAGGGAACCTGAGTTATCAAAAAGGAAATTATCTTGGGATCTCCTTCGAAGATTACATGTGAATCAGAATTTGCCTTGGCCGGTAGCTGGGGATTTTAATGAAATTCTAAAAAATTCAGAAAAGGTCGGTGGGCCTGATAGACCTCCTTGGGCAATCCGACAGTTTCAGGAGGCTTTAGTGATTGTGACTTGTGTGATTTGGGATATAAAGGCTACATCTTTACTCAGCAAACTTGAGTTCTCCATGTGTCCGATCAAGATCTCAATTTGGAAGTGGGCCTATTATCCTAGAATACCTCAAAGCAGACAACACCGTTTTGAGTTGGTTTGGTGTGTTCGTGAGGATTGTGAAACAAAGGTTTGGAAAGGTCAGGAGCTTGGACGGAATTTGAGTCTCTCTAAGAGGCTAGATGGTTGTCTCCATCATTTGTCCAAATGGGGATCCAAACAAAAGGCGGATCCTGGAACAACTCTTAAGAGACTCCAATCCAAACCTGGAACAACTATTAGAGACTTCAATCCGCCATCGCCCAGAATACAGATGTCACTAGTGAAAGGCGAATCTCGGAACAACTCTTGGACGAGGAGGAGATTTATTGGAAATAGAGAAGTCGGATTGACTGCCTCAAATGGGGTGATAGAAATACGGCGTGAAGCCATTGCTCGGGGGCTAGCGCTTTATTCTAAGTTGACTAGTGATCAAGAGATTAATATTCAGAAATCAGCAGCCTGTTTCAGCCCAAATACCTCTCAAGATGATGCGGATTATGTGATCCAGACCCTCAGAGTATCGAAAGTGGCATGTCATAAGCGGTTGTTTTGGACACTATGCATACAACAAGACATGAATGTTGATGAGCATCCATTGCTTCTATGA

Coding sequence (CDS)

ATGGCAGGGGATGATAAATTGGTCACTTTTAATGTATCAGATTTTTCATTTTGGAGAAATCAAGTATTAAATTATTTGCACTCGAAAGAGTTGGAATTGCCATTAGAAAAAAAACCAGATGATATGGGAGAAAAAGAATGGAAGAAGTTGGACAGGAAAGTGTTGGGTACGATTCGCCTAACATTAACAAAAAATGTTCAAAGCAGAGTGGCGAAGGAGACGACCACATTGGGGTTAATGAATGCCCTGACCAACATGTATGAAAAACCCTTGGTAAATAGTAAGGTTTATCTCGCAACTAAATTTTTTAATTTGAAAATGGCTGAAGGTACATCTATTACTGCCCATTTAAATGAGTTTGACGAGTTGATTAATAAACTGTTAGCTGTTGATTTAGAATTCAGTGATGAAGTTTATGCTATTTTGTTGTCAAGATCTTTGCCTGATAGTTGGGAACTCATACGATCTGCTATTTTGTATTCTTGTGGGAAAGAGAAATTGAAATTTGAAGATGTTAGAGATGCAGCTCTTGCTGAAGAAATTCGCAAGAAGGACTCTAGTATCACTTCTACTTCCGGTTCAGCATTGAATGTGGACAGAGGAAGAAATAATAACGAGGCCCCAAAGAAAAATGAAGGGAACGAAGTCGGTGCTAATGTTGCTGAGCAGATACATATGATGCTCTGGAAATCATGGAAAGGTCTATCTTGGAGATTGAGAGCCTTTGGGTATCATTGGTACATTAGTCTTCCCATAGTTGAGACCAAGACAACAAGAATTGAAGATCAGAGTACAACTACTCCGGAGGAAACAGTTGTGGAATCTGAGGAACAGGTTGTTGAACCTGATGGACCAGTTATGGAAACTGAAGAATTGGACTTCTCCACGAGTAGAGAGGAGTCACTACCGTTGCAGAGGAGACGTGATGCTTGTTTTGTCTCCAAGTGGGACATTGTTGAGAATGGAGCCAAAAGAAAATGTTATAATTCTTTCTACATTGATTCTATTGTTTCGACTGACGAAGGCATTTGGAGATTCACAGACTTCTACAGGGAACCTGAGTTATCAAAAAGGAAATTATCTTGGGATCTCCTTCGAAGATTACATGTGAATCAGAATTTGCCTTGGCCGGTAGCTGGGGATTTTAATGAAATTCTAAAAAATTCAGAAAAGGTCGGTGGGCCTGATAGACCTCCTTGGGCAATCCGACAGTTTCAGGAGGCTTTAGTGATTGTGACTTGTGTGATTTGGGATATAAAGGCTACATCTTTACTCAGCAAACTTGAGTTCTCCATGTGTCCGATCAAGATCTCAATTTGGAAGTGGGCCTATTATCCTAGAATACCTCAAAGCAGACAACACCGTTTTGAGTTGGTTTGGTGTGTTCGTGAGGATTGTGAAACAAAGGTTTGGAAAGGTCAGGAGCTTGGACGGAATTTGAGTCTCTCTAAGAGGCTAGATGGTTGTCTCCATCATTTGTCCAAATGGGGATCCAAACAAAAGGCGGATCCTGGAACAACTCTTAAGAGACTCCAATCCAAACCTGGAACAACTATTAGAGACTTCAATCCGCCATCGCCCAGAATACAGATGTCACTAGTGAAAGGCGAATCTCGGAACAACTCTTGGACGAGGAGGAGATTTATTGGAAATAGAGAAGTCGGATTGACTGCCTCAAATGGGGTGATAGAAATACGGCGTGAAGCCATTGCTCGGGGGCTAGCGCTTTATTCTAAGTTGACTAGTGATCAAGAGATTAATATTCAGAAATCAGCAGCCTGTTTCAGCCCAAATACCTCTCAAGATGATGCGGATTATGTGATCCAGACCCTCAGAGTATCGAAAGTGGCATGTCATAAGCGGTTGTTTTGGACACTATGCATACAACAAGACATGAATGTTGATGAGCATCCATTGCTTCTATGA

Protein sequence

MAGDDKLVTFNVSDFSFWRNQVLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSRVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLLAVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSITSTSGSALNVDRGRNNNEAPKKNEGNEVGANVAEQIHMMLWKSWKGLSWRLRAFGYHWYISLPIVETKTTRIEDQSTTTPEETVVESEEQVVEPDGPVMETEELDFSTSREESLPLQRRRDACFVSKWDIVENGAKRKCYNSFYIDSIVSTDEGIWRFTDFYREPELSKRKLSWDLLRRLHVNQNLPWPVAGDFNEILKNSEKVGGPDRPPWAIRQFQEALVIVTCVIWDIKATSLLSKLEFSMCPIKISIWKWAYYPRIPQSRQHRFELVWCVREDCETKVWKGQELGRNLSLSKRLDGCLHHLSKWGSKQKADPGTTLKRLQSKPGTTIRDFNPPSPRIQMSLVKGESRNNSWTRRRFIGNREVGLTASNGVIEIRREAIARGLALYSKLTSDQEINIQKSAACFSPNTSQDDADYVIQTLRVSKVACHKRLFWTLCIQQDMNVDEHPLLL

Homology

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BLAST of Moc08g17790 vs. NCBI nr
Match: XP_022152845.1 (uncharacterized protein LOC111020469 [Momordica charantia])

HSP 1 Score: 306.2 bits (783), Expect = 6.6e-79
Identity = 174/240 (72.50%), Postives = 182/240 (75.83%), Query Frame = 0


Query: 22  VLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSRVAKETTTLGLMN 81
           VL+YLHSKELE PLE KPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS VAK TTT+GLMN
Sbjct: 577 VLDYLHSKELEFPLEGKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSSVAK-TTTMGLMN 636

Query: 82  ALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLLAVDLEFSDEVYAI 141
           AL NMYEK  VN+KVYLATKFFNLKMAE T ITAHLNEFD LINKL+AVDLEFS EVYAI
Sbjct: 637 ALANMYEKASVNNKVYLATKFFNLKMAESTPITAHLNEFDVLINKLVAVDLEFSHEVYAI 696

Query: 142 LLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSITSTSGSALNVDRG 201
           LL RSLPDSWE +R+AI  SC KEKLKFEDVRDAALAEEIR+KDS I  TSGS LNVDRG
Sbjct: 697 LLLRSLPDSWEPMRAAISNSCEKEKLKFEDVRDAALAEEIRRKDSGIAPTSGSVLNVDRG 756

Query: 202 RNNN------------------------------------EAPKKNEGNEVGANVAEQIH 226
           RNNN                                    +APKKNEGNE  ANVAEQIH
Sbjct: 757 RNNNRGYGNRGKSKNNRSRSRNSRFECWNCGKIGHLKSNCKAPKKNEGNEADANVAEQIH 815

[Close]

BLAST of Moc08g17790 vs. NCBI nr
Match: RVW91940.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-49
Identity = 110/216 (50.93%), Postives = 152/216 (70.37%), Query Frame = 0


Query: 6   KLVTFNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTK 65
           ++  F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  KEW  LDR+VLG IRLTL++
Sbjct: 10  RIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAKEWALLDRQVLGVIRLTLSR 69

Query: 66  NVQSRVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELI 125
           +V   V KE TT  LM AL+ MYEKP  N+KV+L  K FNLKMAE  S+  HLNEF+ + 
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129

Query: 126 NKLLAVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKK 185
           N+L +V+++F DE+ A+++  SLP+SWE +R A+  S GKEKLK+ DVRD  LAEEIR++
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDVRDLILAEEIRRR 189

Query: 186 DSSITSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           D+  TS SGSALN++ RGR NN    +   N   +N
Sbjct: 190 DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. NCBI nr
Match: CAN81130.1 (hypothetical protein VITISV_003944 [Vitis vinifera])

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-49
Identity = 109/212 (51.42%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 10  FNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS 69
           F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  +EW  LDR+VLG IRLTL+++V  
Sbjct: 14  FDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAH 73

Query: 70  RVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLL 129
            V KE TT  LM AL+ MYEKP  N+KV+L TK FNLKMAE  S+  HLNEF+ + N+L 
Sbjct: 74  NVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTITNQLS 133

Query: 130 AVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSI 189
           +V+++F DE+ A+++  SLP+SWE +R A+  S GKEKLK+ D+RD  LAEEIR++D+  
Sbjct: 134 SVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGE 193

Query: 190 TSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           TS SGSALN++ RGR NN    +   N   +N
Sbjct: 194 TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. NCBI nr
Match: RVX09487.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 206.8 bits (525), Expect = 5.4e-49
Identity = 108/212 (50.94%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 10  FNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS 69
           F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  +EW  LDR+VLG IRLTL+++V  
Sbjct: 14  FDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAH 73

Query: 70  RVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLL 129
            V KE TT  LM AL+ MYEKP  N+KV+L  K FNLKMAE  S+  HLNEF+ + N+L 
Sbjct: 74  NVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLS 133

Query: 130 AVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSI 189
           +V+++F DE++A+++  SLP+SWE +R A+  S GKEKLK+ D+RD  LAEEIR++D+  
Sbjct: 134 SVEIDFDDEIHALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGE 193

Query: 190 TSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           TS SGSALN++ RGR NN    +   N   +N
Sbjct: 194 TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. NCBI nr
Match: CAN75500.1 (hypothetical protein VITISV_034155 [Vitis vinifera])

HSP 1 Score: 206.5 bits (524), Expect = 7.1e-49
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 10  FNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS 69
           F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  +EW  LDR+VLG IRLTL++++  
Sbjct: 14  FDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSIAH 73

Query: 70  RVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLL 129
            V KE TT  LM AL+ MYEKP  N+KV+L  K FNLKMAE  S+  HLNEF+ + N+L 
Sbjct: 74  NVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLS 133

Query: 130 AVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSI 189
           +V++EF DE++A+++  SLP+SWE +R A+  S GKEKLK+ D+RD  L EEIR++D+  
Sbjct: 134 SVEIEFDDEIHALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILVEEIRRRDAGE 193

Query: 190 TSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           TS SGSALN++ RGR NN+   +   N   +N
Sbjct: 194 TSGSGSALNLETRGRGNNKNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. ExPASy TrEMBL
Match: A0A6J1DF43 (uncharacterized protein LOC111020469 OS=Momordica charantia OX=3673 GN=LOC111020469 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.2e-79
Identity = 174/240 (72.50%), Postives = 182/240 (75.83%), Query Frame = 0


Query: 22  VLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSRVAKETTTLGLMN 81
           VL+YLHSKELE PLE KPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS VAK TTT+GLMN
Sbjct: 577 VLDYLHSKELEFPLEGKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSSVAK-TTTMGLMN 636

Query: 82  ALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLLAVDLEFSDEVYAI 141
           AL NMYEK  VN+KVYLATKFFNLKMAE T ITAHLNEFD LINKL+AVDLEFS EVYAI
Sbjct: 637 ALANMYEKASVNNKVYLATKFFNLKMAESTPITAHLNEFDVLINKLVAVDLEFSHEVYAI 696

Query: 142 LLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSITSTSGSALNVDRG 201
           LL RSLPDSWE +R+AI  SC KEKLKFEDVRDAALAEEIR+KDS I  TSGS LNVDRG
Sbjct: 697 LLLRSLPDSWEPMRAAISNSCEKEKLKFEDVRDAALAEEIRRKDSGIAPTSGSVLNVDRG 756

Query: 202 RNNN------------------------------------EAPKKNEGNEVGANVAEQIH 226
           RNNN                                    +APKKNEGNE  ANVAEQIH
Sbjct: 757 RNNNRGYGNRGKSKNNRSRSRNSRFECWNCGKIGHLKSNCKAPKKNEGNEADANVAEQIH 815

[Close]

BLAST of Moc08g17790 vs. ExPASy TrEMBL
Match: A0A0D3DMW7 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.8e-50
Identity = 114/216 (52.78%), Postives = 156/216 (72.22%), Query Frame = 0


Query: 1   MAGDD----KLVTFNVSDFSFWRNQVLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLG 60
           M G+D     +  F+ +D++FWR Q+ +YL+ K+L  PL KKP+ M + EW+ LDR+VLG
Sbjct: 2   MGGEDGSTHSIGKFDGTDYAFWRMQIEDYLYGKKLHQPLSKKPEKMDQDEWELLDRQVLG 61

Query: 61  TIRLTLTKNVQSRVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAH 120
            IRLTL+KNV   +AKE TT GLM  L++MYEKP VN+KV+L  K F+LKM EG  + AH
Sbjct: 62  VIRLTLSKNVTHNIAKEKTTEGLMKVLSDMYEKPSVNNKVFLMKKLFHLKMEEGGLVAAH 121

Query: 121 LNEFDELINKLLAVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAA 180
           +NEF+ ++N+L +V++EF DEV A++L  SLP+SWE +R+A+  S G +KLKF DVRD  
Sbjct: 122 VNEFNTIVNQLSSVEIEFDDEVRALILLASLPNSWEPMRAAVNNSVGTQKLKFNDVRDRI 181

Query: 181 LAEEIRKKDSSITSTSGSALNVD-RGRNNNEAPKKN 212
           LAEE+R+ DS  TSTS SA NV+ RGRN +   + N
Sbjct: 182 LAEEVRRIDSGETSTS-SAFNVENRGRNPDRNNRSN 216

[Close]

BLAST of Moc08g17790 vs. ExPASy TrEMBL
Match: A0A0D3AEM1 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-50
Identity = 115/216 (53.24%), Postives = 153/216 (70.83%), Query Frame = 0


Query: 1   MAGDDKLV----TFNVSDFSFWRNQVLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLG 60
           M G+D L      F+ +D++FWR Q+ +YL+ K+L  PL KKP+ M + EW+ LDR+VLG
Sbjct: 1   MGGEDGLAHSIGKFDGTDYAFWRMQIEDYLYGKKLHQPLSKKPEKMDQDEWELLDRQVLG 60

Query: 61  TIRLTLTKNVQSRVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAH 120
            IRLTL+KNV   V KE TT GLM  L++MYEKP  NSKV+L  K F+LKM EG  +TAH
Sbjct: 61  VIRLTLSKNVAHNVVKEKTTEGLMKVLSDMYEKPSANSKVFLMKKLFHLKMEEGGLVTAH 120

Query: 121 LNEFDELINKLLAVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAA 180
           +NEF+ ++N+L +V++EF DEV A++L  SLP+SWE +R A+  S G +KLKF DVRD  
Sbjct: 121 INEFNTIVNQLSSVEIEFEDEVRALILLASLPNSWESMRVAVSNSVGTQKLKFNDVRDRI 180

Query: 181 LAEEIRKKDSSITSTSGSALNVD-RGRNNNEAPKKN 212
           LAEE+R+ DS   STS SA NV+ RGRN +   + N
Sbjct: 181 LAEEVRRIDSGEASTS-SAFNVENRGRNPDRNNRSN 215

[Close]

BLAST of Moc08g17790 vs. ExPASy TrEMBL
Match: A0A438I5F3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_662 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-49
Identity = 110/216 (50.93%), Postives = 152/216 (70.37%), Query Frame = 0


Query: 6   KLVTFNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTK 65
           ++  F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  KEW  LDR+VLG IRLTL++
Sbjct: 10  RIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAKEWALLDRQVLGVIRLTLSR 69

Query: 66  NVQSRVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELI 125
           +V   V KE TT  LM AL+ MYEKP  N+KV+L  K FNLKMAE  S+  HLNEF+ + 
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129

Query: 126 NKLLAVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKK 185
           N+L +V+++F DE+ A+++  SLP+SWE +R A+  S GKEKLK+ DVRD  LAEEIR++
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDVRDLILAEEIRRR 189

Query: 186 DSSITSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           D+  TS SGSALN++ RGR NN    +   N   +N
Sbjct: 190 DAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. ExPASy TrEMBL
Match: A5BGX3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-49
Identity = 109/212 (51.42%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 10  FNVSDFSFWRNQVLNYLHSKELELP-LEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQS 69
           F+ +DF++WR Q+ +YL+ ++L LP L  KP+ M  +EW  LDR+VLG IRLTL+++V  
Sbjct: 14  FDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAH 73

Query: 70  RVAKETTTLGLMNALTNMYEKPLVNSKVYLATKFFNLKMAEGTSITAHLNEFDELINKLL 129
            V KE TT  LM AL+ MYEKP  N+KV+L TK FNLKMAE  S+  HLNEF+ + N+L 
Sbjct: 74  NVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTITNQLS 133

Query: 130 AVDLEFSDEVYAILLSRSLPDSWELIRSAILYSCGKEKLKFEDVRDAALAEEIRKKDSSI 189
           +V+++F DE+ A+++  SLP+SWE +R A+  S GKEKLK+ D+RD  LAEEIR++D+  
Sbjct: 134 SVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGE 193

Query: 190 TSTSGSALNVD-RGRNNNEAPKKNEGNEVGAN 220
           TS SGSALN++ RGR NN    +   N   +N
Sbjct: 194 TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 225

[Close]

BLAST of Moc08g17790 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-12
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 13 SDFSFWRNQVLNYLHSKELELPLEKKPDDMGEKEWKKLDRKVLGTIRLTLTKNVQSRVAK 72
          + +SF R ++ +YL+ K+L  PL KK + M + +W  L R+VL  IRLT++KN+   VAK
Sbjct: 12 TSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAK 71

Query: 73 ETTTLGLMNALTNMYEKPLVNSKV 97
          E +  GLM  L+++Y+KP  N+ V
Sbjct: 72 EKSPDGLMKVLSDIYKKPSTNNTV 95

The following BLAST results are available for this feature:

BLAST of Moc08g17790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152845.1	6.6e-79	72.50	uncharacterized protein LOC111020469 [Momordica charantia]	[more]
RVW91940.1	2.4e-49	50.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN81130.1	3.2e-49	51.42	hypothetical protein VITISV_003944 [Vitis vinifera]	[more]
RVX09487.1	5.4e-49	50.94	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN75500.1	7.1e-49	50.47	hypothetical protein VITISV_034155 [Vitis vinifera]	[more]

BLAST of Moc08g17790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g17790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF43	3.2e-79	72.50	uncharacterized protein LOC111020469 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A0D3DMW7	1.8e-50	52.78	CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376...	[more]
A0A0D3AEM1	2.4e-50	53.24	CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376...	[more]
A0A438I5F3	1.2e-49	50.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5BGX3	1.5e-49	51.42	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1	[more]

BLAST of Moc08g17790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29785.1	3.3e-12	42.86	unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 47..185 e-value: 6.0E-26 score: 90.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..524
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..524
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 9..206
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 9..206
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 309..408

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g17790.1	Moc08g17790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding