Moc08g16900 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAACCTCCTGGATATATTGAATCTGGTAAAGGGAAACTTGTTTGTCACCTTCAAAGGTCCATTTACGGACTTAAACAGTCACCAAGACAGTGGAATAAGCGATTTGACACATTTATCACCTCAAGAGGCTTCATTAAAAATTCATTTGACTGTTGCGTGTATAAGAAAACGACAAATTCTGAAGTCTCTATTTGGCTTCTACTGTATGTGGACGATATCTTGATTGCTTCAAATAGTAAGGTTGAAATAAACAAACTAAAAGCACAACTAGAAAAGAGTTTGACACGAAAGATTTGGGAGAAGTTAAAAAGATCTTGGGAATGGAAATAA ATGAAGCAACCTCCTGGATATATTGAATCTGGTAAAGGGAAACTTGTTTGTCACCTTCAAAGGTCCATTTACGGACTTAAACAGTCACCAAGACAGTGGAATAAGCGATTTGACACATTTATCACCTCAAGAGGCTTCATTAAAAATTCATTTGACTGTTGCGTGTATAAGAAAACGACAAATTCTGAAGTCTCTATTTGGCTTCTACTGTATGTGGACGATATCTTGATTGCTTCAAATAGTAAGGTTGAAATAAACAAACTAAAAGCACAACTAGAAAAGAGTTTGACACGAAAGATTTGGGAGAAGTTAAAAAGATCTTGGGAATGGAAATAA ATGAAGCAACCTCCTGGATATATTGAATCTGGTAAAGGGAAACTTGTTTGTCACCTTCAAAGGTCCATTTACGGACTTAAACAGTCACCAAGACAGTGGAATAAGCGATTTGACACATTTATCACCTCAAGAGGCTTCATTAAAAATTCATTTGACTGTTGCGTGTATAAGAAAACGACAAATTCTGAAGTCTCTATTTGGCTTCTACTGTATGTGGACGATATCTTGATTGCTTCAAATAGTAAGGTTGAAATAAACAAACTAAAAGCACAACTAGAAAAGAGTTTGACACGAAAGATTTGGGAGAAGTTAAAAAGATCTTGGGAATGGAAATAA MKQPPGYIESGKGKLVCHLQRSIYGLKQSPRQWNKRFDTFITSRGFIKNSFDCCVYKKTTNSEVSIWLLLYVDDILIASNSKVEINKLKAQLEKSLTRKIWEKLKRSWEWK Homology
BLAST of Moc08g16900 vs. NCBI nr
Match: KYP38863.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]) HSP 1 Score: 121.3 bits (303), Expect = 5.2e-24 Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Moc08g16900 vs. NCBI nr
Match: KAG8474589.1 (hypothetical protein CXB51_031229 [Gossypium anomalum]) HSP 1 Score: 120.6 bits (301), Expect = 8.8e-24 Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of Moc08g16900 vs. NCBI nr
Match: RLM61347.1 (retrotransposon protein, putative, Ty1-copia subclass [Panicum miliaceum]) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23 Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Moc08g16900 vs. NCBI nr
Match: RVW49359.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 117.9 bits (294), Expect = 5.7e-23 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Moc08g16900 vs. NCBI nr
Match: KAG8478610.1 (hypothetical protein CXB51_028417 [Gossypium anomalum]) HSP 1 Score: 117.1 bits (292), Expect = 9.8e-23 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 8.9e-19 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.0e-11 Identity = 33/104 (31.73%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-09 Identity = 32/99 (32.32%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy TrEMBL
Match: A0A151R8N8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_039844 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24 Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy TrEMBL
Match: A0A3L6PRB6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Panicum miliaceum OX=4540 GN=C2845_PM14G10480 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.6e-24 Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy TrEMBL
Match: A0A438ENN9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2814 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.8e-23 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy TrEMBL
Match: A0A5H2Y1B3 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_439S000200 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 8.1e-23 Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of Moc08g16900 vs. ExPASy TrEMBL
Match: A0A438EBT7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3558 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.8e-22 Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of Moc08g16900 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 73.9 bits (180), Expect = 8.8e-14 Identity = 39/97 (40.21%), Postives = 62/97 (63.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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