Moc07g10260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g10260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Location	chr7: 7877652 .. 7878801 (-)
RNA-Seq Expression	Moc07g10260
Synteny	Moc07g10260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGTTCCACTTCTTTCTCGCTAGCTTTCTCATCGTGATTGTTAGCCTTTACTTGAGCGGATTGTGTCTCATGTTTGGAGTTGGTCGGCTCGGGTGCTTCCTTTTGTTGGCCTATTGCAGCTTATACGATCGATTCTACAGAGTTTTCAGGTCTATTGGGCCAGTGTGTTTATCCTTCCAAATCAGGTTGTTTATGATGTTAAGCGGATTCTGTGTTCTTTCTTGTGGAAGGGGCGCGAGAGCGAGCAATTAGGGACTAACGTGGCTGGCTTAGTCTGAAGTGTGTATTCCTTTGAGGGAGGGTGGTTTGGGTGTGCGTCACTTGGCCTCTTGGAATTCTACCGCTATAATATAGCTACTATGGCTTCTCTTTACGCGGATCATTCGTGCTTCGCCTCTATTCTCTTTTTGTTGGTCGGGATATTCTTTTTGTCCGGGACGCTTTTCGGCCTCTGGTTCGGTTTGTTATTAGAGGGCATGACGCTTGGCTTCCGGGAGGTTCGATTTATCCGAGGTTTGGTGATCGAATTATCTATGATGTTGCAAGCTCATCCCGGCGAAGGTTGCTTATTTTATGTTTCCCAATGGTTCGTGGCGCTGGCTTGGGGGGTTGGTTGATCTTCGGCAGTTGGTCCCTAAGGTTTCATCTGTGCAGGTTTTAGTTTAGAGGGTTGATGTGCCCATTTGGATTCCGGTGCGTCGGGTCTCTTCTCAGTGTCGAGTGCGTGGGGTGTGTTGCGGTTAGCTCGGCCTTCTATTCTTTGGTTTTCTTGTTGGTTTCGTTTGGTGGTAACATTCTGAAGCATTCTTTCATTGCTTGGTTAGCAAGGCGTGATCGGCTTGCTATGAGGGATCGCTTATGTTGTTGGGACTCTTCTGTTCCTGCTTCCTATGTGTTTTGTGCTAGCATGGAGTCCCGGGATCATCTATTCTTTGAGTGTCCCTTTAGTTGGGAGGACTGGTCTGGCATGATTGTTTGGGCTGGTTCTTCTTACCGAGATTCATATTGGTCTACGAAGCTTATTGTATTTGTCACATTAGTGCCGGGAAGTTTGCTCGTCGTCATGTGTGGTGCTTGGCCTGGACTTCTACTGTTTCTTTTATCTCTAGGGAGCGGAATGCTAGAGTTCATGCAGGTGGGGTGA

mRNA sequence

ATGTCGGGGTTCCACTTCTTTCTCGCTAGCTTTCTCATCGTGATTGTTAGCCTTTACTTGAGCGGATTGTGTCTCATGTTTGGAGTTGGTCGGCTCGGGTGCTTCCTTTTGTTGGCCTATTGCAGCTTATACGATCGATTCTACAGAGTTTTCAGGTCTATTGGGCCAGTGTGTTTATCCTTCCAAATCAGCTACTATGGCTTCTCTTTACGCGGATCATTCGTGCTTCGCCTCTATTCTCTTTTTGTTGGTCGGGATATTCTTTTTGTCCGGGACGCTTTTCGGCCTCTGGTTCGGTTTGTTATTAGAGGGCATGACGCTTGGCTTCCGGGAGGTTCGATTTATCCGAGGTTTGGTGATCGAATTATCTATGATGTTGCAAGCTCATCCCGGCGAAGGTTGCTTATTTTATGTTTCCCAATGTTTAGAGGGTTGATGTGCCCATTTGGATTCCGGTGCGTCGGGTCTCTTCTCAGTGTCGAGTGCGTGGGGTGTGTTGCGGTTAGCTCGGCCTTCTATTCTTTGGTTTTCTTGTTGGTTTCGTTTGGTGGTAACATTCTGAAGCATTCTTTCATTGCTTGGTTAGCAAGGCGTGATCGGCTTGCTATGAGGGATCGCTTATGTTGTTGGGACTCTTCTGTTCCTGCTTCCTATGTGTTTTGTGCTAGCATGGAGTCCCGGGATCATCTATTCTTTGAGTGTCCCTTTAGTTGGGAGGACTGGTCTGGCATGATTGTTTGGGCTGGTTCTTCTTACCGAGATTCATATTGGTCTACGAAGCTTATTGTATTTGTCACATTAGTGCCGGGAAGTTTGCTCGTCGTCATGTGTGGTGCTTGGCCTGGACTTCTACTGTTTCTTTTATCTCTAGGGAGCGGAATGCTAGAGTTCATGCAGGTGGGGTGA

Coding sequence (CDS)

ATGTCGGGGTTCCACTTCTTTCTCGCTAGCTTTCTCATCGTGATTGTTAGCCTTTACTTGAGCGGATTGTGTCTCATGTTTGGAGTTGGTCGGCTCGGGTGCTTCCTTTTGTTGGCCTATTGCAGCTTATACGATCGATTCTACAGAGTTTTCAGGTCTATTGGGCCAGTGTGTTTATCCTTCCAAATCAGCTACTATGGCTTCTCTTTACGCGGATCATTCGTGCTTCGCCTCTATTCTCTTTTTGTTGGTCGGGATATTCTTTTTGTCCGGGACGCTTTTCGGCCTCTGGTTCGGTTTGTTATTAGAGGGCATGACGCTTGGCTTCCGGGAGGTTCGATTTATCCGAGGTTTGGTGATCGAATTATCTATGATGTTGCAAGCTCATCCCGGCGAAGGTTGCTTATTTTATGTTTCCCAATGTTTAGAGGGTTGATGTGCCCATTTGGATTCCGGTGCGTCGGGTCTCTTCTCAGTGTCGAGTGCGTGGGGTGTGTTGCGGTTAGCTCGGCCTTCTATTCTTTGGTTTTCTTGTTGGTTTCGTTTGGTGGTAACATTCTGAAGCATTCTTTCATTGCTTGGTTAGCAAGGCGTGATCGGCTTGCTATGAGGGATCGCTTATGTTGTTGGGACTCTTCTGTTCCTGCTTCCTATGTGTTTTGTGCTAGCATGGAGTCCCGGGATCATCTATTCTTTGAGTGTCCCTTTAGTTGGGAGGACTGGTCTGGCATGATTGTTTGGGCTGGTTCTTCTTACCGAGATTCATATTGGTCTACGAAGCTTATTGTATTTGTCACATTAGTGCCGGGAAGTTTGCTCGTCGTCATGTGTGGTGCTTGGCCTGGACTTCTACTGTTTCTTTTATCTCTAGGGAGCGGAATGCTAGAGTTCATGCAGGTGGGGTGA

Protein sequence

MSGFHFFLASFLIVIVSLYLSGLCLMFGVGRLGCFLLLAYCSLYDRFYRVFRSIGPVCLSFQISYYGFSLRGSFVLRLYSLFVGRDILFVRDAFRPLVRFVIRGHDAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGCVAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASMESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKLIVFVTLVPGSLLVVMCGAWPGLLLFLLSLGSGMLEFMQVG

Homology

[Close]

BLAST of Moc07g10260 vs. NCBI nr
Match: XP_022158861.1 (uncharacterized protein LOC111025324 [Momordica charantia])

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-31
Identity = 86/182 (47.25%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 105 HDAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFP--MFRGLMCPFG-FRCVGSLLSVE 164
           HD WL GG I+PR GDR+IYDVASSS  +++    P   +R           +  ++SV 
Sbjct: 143 HDPWLSGGPIHPRCGDRVIYDVASSSMAKVVDFLLPDGSWRWPRVSVDLLELLPEVMSVR 202

Query: 165 CV--------------GCVAVSSAFYSL--------VFLLVSFGGNILKHSFIAWLARRD 224
            V              G  +VSS +  L         F L+ FGGNI KHSFI+WLA RD
Sbjct: 203 TVVGKEDRFVWTPAVSGLFSVSSVWGILRPRRPPVSYFYLLWFGGNIPKHSFISWLAIRD 262

Query: 225 RLAMRDRLCCWDSSVPASYVFCASMESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWST 262
           RL  R+RL  W++ VPA+ VFCA +ESRDHLF +CP+S   W+GMI WAGSS+R SYWST
Sbjct: 263 RLFTRERLRQWNALVPATCVFCAGLESRDHLFLDCPYSRAVWAGMISWAGSSHRVSYWST 322

[Close]

BLAST of Moc07g10260 vs. NCBI nr
Match: XP_022157473.1 (uncharacterized protein LOC111024165 [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-27
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 177 FLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASMESRDHLFFECPF 236
           F LV FGGNI KHSFIAWLA RDRLA RDRLC WD SV  S VFC   ES D+LFFECPF
Sbjct: 211 FSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPF 270

Query: 237 SWEDWSGMIVWAGSSYRDSYWSTKL 262
           SWE WS MI WAGSS R SYWST+L
Sbjct: 271 SWEVWSSMIAWAGSSRRISYWSTEL 295

[Close]

BLAST of Moc07g10260 vs. NCBI nr
Match: XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-20
Identity = 64/157 (40.76%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  R G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 736 DPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 795

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 796 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 855

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 856 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 885

[Close]

BLAST of Moc07g10260 vs. NCBI nr
Match: TYK19523.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-20
Identity = 64/157 (40.76%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  R G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 784 DPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 843

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 844 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 903

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 904 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 933

[Close]

BLAST of Moc07g10260 vs. NCBI nr
Match: KAA0057642.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-19
Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  + G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 803 DPWLQRGAILEQVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 862

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 863 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 922

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 923 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 952

[Close]

BLAST of Moc07g10260 vs. ExPASy TrEMBL
Match: A0A6J1E271 (uncharacterized protein LOC111025324 OS=Momordica charantia OX=3673 GN=LOC111025324 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.2e-32
Identity = 86/182 (47.25%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 105 HDAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFP--MFRGLMCPFG-FRCVGSLLSVE 164
           HD WL GG I+PR GDR+IYDVASSS  +++    P   +R           +  ++SV 
Sbjct: 143 HDPWLSGGPIHPRCGDRVIYDVASSSMAKVVDFLLPDGSWRWPRVSVDLLELLPEVMSVR 202

Query: 165 CV--------------GCVAVSSAFYSL--------VFLLVSFGGNILKHSFIAWLARRD 224
            V              G  +VSS +  L         F L+ FGGNI KHSFI+WLA RD
Sbjct: 203 TVVGKEDRFVWTPAVSGLFSVSSVWGILRPRRPPVSYFYLLWFGGNIPKHSFISWLAIRD 262

Query: 225 RLAMRDRLCCWDSSVPASYVFCASMESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWST 262
           RL  R+RL  W++ VPA+ VFCA +ESRDHLF +CP+S   W+GMI WAGSS+R SYWST
Sbjct: 263 RLFTRERLRQWNALVPATCVFCAGLESRDHLFLDCPYSRAVWAGMISWAGSSHRVSYWST 322

[Close]

BLAST of Moc07g10260 vs. ExPASy TrEMBL
Match: A0A6J1DTG0 (uncharacterized protein LOC111024165 OS=Momordica charantia OX=3673 GN=LOC111024165 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-28
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 177 FLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASMESRDHLFFECPF 236
           F LV FGGNI KHSFIAWLA RDRLA RDRLC WD SV  S VFC   ES D+LFFECPF
Sbjct: 211 FSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPF 270

Query: 237 SWEDWSGMIVWAGSSYRDSYWSTKL 262
           SWE WS MI WAGSS R SYWST+L
Sbjct: 271 SWEVWSSMIAWAGSSRRISYWSTEL 295

[Close]

BLAST of Moc07g10260 vs. ExPASy TrEMBL
Match: A0A5D3D7P6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00080 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-20
Identity = 64/157 (40.76%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  R G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 784 DPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 843

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 844 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 903

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 904 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 933

[Close]

BLAST of Moc07g10260 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-20
Identity = 64/157 (40.76%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  R G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 736 DPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 795

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 796 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 855

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 856 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 885

[Close]

BLAST of Moc07g10260 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-19
Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 106 DAWLPGGSIYPRFGDRIIYDVASSSRRRLLILCFPMFRGLMCPFGFRCVGSLLSVECVGC 165
           D WL  G+I  + G+R++YD AS     L     P    L    GF    +  ++   G 
Sbjct: 803 DPWLQRGAILEQVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIRPRGG 862

Query: 166 VAVSSAFYSLVFLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASM 225
             +          L+  GGNI KHSF AWLA +DRL  RDR   WDSSVP S + C   M
Sbjct: 863 RVLWDG-------LLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGM 922

Query: 226 ESRDHLFFECPFSWEDWSGMIVWAGSSYRDSYWSTKL 262
           ESRDHLFF CPF  + WS ++    SS+R  +W  +L
Sbjct: 923 ESRDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGVEL 952

[Close]

BLAST of Moc07g10260 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 62.0 bits (149), Expect = 9.4e-10
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 180 VSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASM-ESRDHLFFECPFSW 239
           V F  ++ KH+FI W+   +RL  RDRL  W  S+PA  + C S  ESR HLFFECPF  
Sbjct: 155 VWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPFCG 214

Query: 240 EDW 242
             W
Sbjct: 215 AVW 217

[Close]

BLAST of Moc07g10260 vs. TAIR 10
Match: AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-09
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 177 FLLVSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASM-ESRDHLFFECP 236
           F  + F G I KH+FIAW+  R RL  +DR+  W    P   +FC +  E+R HLFF+C 
Sbjct: 44  FKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFDCE 103

Query: 237 FSWEDW 242
           F+ E W
Sbjct: 104 FAREVW 109

[Close]

BLAST of Moc07g10260 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-09
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 180 VSFGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASMESRDHLFFECPFSW 239
           V F  ++ KH+FI W+   +RL  RDRL  W  S+PA  + C A  +SR HLFFEC FS 
Sbjct: 133 VWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSG 192

Query: 240 EDW 242
             W
Sbjct: 193 VVW 195

[Close]

BLAST of Moc07g10260 vs. TAIR 10
Match: AT5G16486.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 182 FGGNILKHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFC-ASMESRDHLFFECPFSWE 240
           F G I KH+FI+W+  R RL  RD+L  W   VP+  + C A  E+R HLFF+C F+ E
Sbjct: 150 FKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDETRQHLFFDCVFAGE 208

[Close]

BLAST of Moc07g10260 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 55.5 bits (132), Expect = 8.8e-08
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 188 KHSFIAWLARRDRLAMRDRLCCWDSSVPASYVFCASM-ESRDHLFFECPFSWE 240
           K+S +AW+A ++RL   DR+  W++   +S V C  + E+RDHLFF CP+S E
Sbjct: 296 KYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAE 348

The following BLAST results are available for this feature:

BLAST of Moc07g10260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158861.1	1.1e-31	47.25	uncharacterized protein LOC111025324 [Momordica charantia]	[more]
XP_022157473.1	1.6e-27	75.29	uncharacterized protein LOC111024165 [Momordica charantia]	[more]
XP_008452126.1	9.4e-20	40.76	PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]	[more]
TYK19523.1	9.4e-20	40.76	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0057642.1	2.7e-19	40.13	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g10260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g10260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E271	5.2e-32	47.25	uncharacterized protein LOC111025324 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DTG0	7.8e-28	75.29	uncharacterized protein LOC111024165 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5D3D7P6	4.6e-20	40.76	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A1S3BSI8	4.6e-20	40.76	uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=...	[more]
A0A5A7UP65	1.3e-19	40.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Moc07g10260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43730.1	9.4e-10	49.21	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G02520.1	3.6e-09	43.94	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G04650.1	6.1e-09	47.62	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT5G16486.1	2.3e-08	47.46	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G24255.1	8.8e-08	45.28	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 186..241 e-value: 1.5E-9 score: 38.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g10260.1	Moc07g10260.1	mRNA