Moc07g09650 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g09650
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr7: 7434300 .. 7435402 (+)
RNA-Seq Expression	Moc07g09650
Synteny	Moc07g09650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTGAGTCGAAGGGGGCTCTCATAGACGAGCAGAGTCAGGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTTCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG

mRNA sequence

ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG

Coding sequence (CDS)

ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG

Protein sequence

MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYDRLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNSRMKEDSSVLNTNAVMNKLEYTLTTILNELQTYQSLMKSKGQEREANVATSKRFNRGSSSGTKSAPSSSKSKTFKKKKAAGKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCLQIRICIYY

Homology

[Close]

BLAST of Moc07g09650 vs. NCBI nr
Match: KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 389.8 bits (1000), Expect = 2.3e-104
Identity = 215/366 (58.74%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L K+CPQ PA NAT  VR  Y+
Sbjct: 118 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRTVREPYE 177

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 178 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 237

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 238 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 297

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 298 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 357

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 358 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 417

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 418 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 475

[Close]

BLAST of Moc07g09650 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.1e-104
Identity = 215/366 (58.74%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L K+CPQ PA NAT  VR  Y+
Sbjct: 118 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRTVREPYE 177

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 178 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 237

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 238 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 297

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 298 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 357

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 358 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 417

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 418 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 475

[Close]

BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

[Close]

BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0


Query: 1   MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
           M+++ +  LAA KLN  NY  WK+ +NT+L+IDDLRF+L ++CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
           R  KAN+KA+ Y L S+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
           RM E +SV                                          +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
           TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
           G+G+K     AAAK  K   A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300

Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
           TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG     
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358

The following BLAST results are available for this feature:

BLAST of Moc07g09650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062993.1	2.3e-104	58.74	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	6.7e-104	58.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	6.7e-104	58.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	6.7e-104	58.47	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0047792.1	6.7e-104	58.47	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g09650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g09650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4M1	1.1e-104	58.74	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7SMH8	3.2e-104	58.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	3.2e-104	58.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TWB9	3.2e-104	58.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	3.2e-104	58.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Moc07g09650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..188
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 9..128
None	No IPR available	PANTHER	PTHR35317:SF16	ZINC FINGER, CCHC-TYPE-RELATED	coord: 9..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g09650.1	Moc07g09650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding