Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTGAGTCGAAGGGGGCTCTCATAGACGAGCAGAGTCAGGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTTCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG
mRNA sequence
ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG
Coding sequence (CDS)
ATGTCTGCTTCCATTATTGCATTCCTAGCCGCTCAAAAACTTAATAGCGAGAATTACAAACAATGGAAATCGAATCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCATCTTGCAAAAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTGGCGGTGCGCAACGCCTATGACAGGCTGATCAAGGCCAATGACAAGGCCAAGGTCTACAGCCTGGTGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGATGCAGTCACCGCGAAGGAGATCATGGACTCGCTGCAAAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCCTTAAGTTGGTTTACAACTCCCGCATGAAGGAGGACTCCTCAGTGCTAAACACCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGATCTTAAACGAGTTGCAGACCTACCAGTCTCTTATGAAGAGTAAGGGACAAGAACGGGAGGCAAATGTTGCCACCTCAAAAAGGTTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTAAAAGTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGAATCCGTTACTGCCGCTGCCAAGAAAGACAAGGCCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGAGCATTGGAAGTGCAACTGCCCAAAGTACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCGCCTGGATATTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAGCTTGACGCTGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAGCTGTGGCGGTGGGGAGCTCAAGTTGTTTACAAATAAGAATATGTATATATTATTAG
Protein sequence
MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYDRLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNSRMKEDSSVLNTNAVMNKLEYTLTTILNELQTYQSLMKSKGQEREANVATSKRFNRGSSSGTKSAPSSSKSKTFKKKKAAGKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLETCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCLQIRICIYY
Homology
BLAST of Moc07g09650 vs. NCBI nr
Match:
KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 389.8 bits (1000), Expect = 2.3e-104
Identity = 215/366 (58.74%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L K+CPQ PA NAT VR Y+
Sbjct: 118 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRTVREPYE 177
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 178 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 237
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 238 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 297
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 298 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 357
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 358 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 417
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 418 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 475
BLAST of Moc07g09650 vs. NCBI nr
Match:
TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. NCBI nr
Match:
KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. NCBI nr
Match:
KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. NCBI nr
Match:
KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match:
A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)
HSP 1 Score: 389.8 bits (1000), Expect = 1.1e-104
Identity = 215/366 (58.74%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L K+CPQ PA NAT VR Y+
Sbjct: 118 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRTVREPYE 177
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 178 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 237
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 238 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 297
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 298 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 357
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 358 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 417
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 418 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 475
BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match:
A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match:
A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
BLAST of Moc07g09650 vs. ExPASy TrEMBL
Match:
A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)
HSP 1 Score: 388.3 bits (996), Expect = 3.2e-104
Identity = 214/366 (58.47%), Postives = 261/366 (71.31%), Query Frame = 0
Query: 1 MSASIIAFLAAQKLNSENYKQWKSNLNTILVIDDLRFILQKDCPQAPAPNATVAVRNAYD 60
M+++ + LAA KLN NY WK+ +NT+L+IDDLRF+L ++CPQ PA NAT VR Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 61 RLIKANDKAKVYSLVSISDVLAKKHEDAVTAKEIMDSLQSMFGQPSSQARHEALKLVYNS 120
R KAN+KA+ Y L S+S+VLAKKHE +TA+EIMDSLQ MFGQ S Q +H+ALK +YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 121 RMKEDSSV----------------------------------------LNTNAVMNKLEY 180
RM E +SV +NAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 181 TLTTILNELQTYQSLMKSKGQEREANVATS-KRFNRGSSSGTKSAPSSSKSKTFKKKKAA 240
TLTT+LNELQT++SLMK KGQ+ EANVATS ++F+RGS+SGTKS PSSS +K +KKKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240
Query: 241 GKGSKPESVTAAAKKDKAKVAEKGKCFHCNMDEHWKCNCPKYLAEKKKANEGKYDLLVLE 300
G+G+K AAAK K A KG CFHCN + HWK NCPKYLAEKKKA +GKYDLLVLE
Sbjct: 241 GQGNKAN--LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLE 300
Query: 301 TCLVENDDSAWILDSGATNHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSAVAVGSSSCL 326
TCLVENDDSAWI+DSGATNHVCSSFQGISSWRQL+ GEMT++VGTG VVSA+AVG
Sbjct: 301 TCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG---- 358
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0062993.1 | 2.3e-104 | 58.74 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
TYK14550.1 | 6.7e-104 | 58.47 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0054490.1 | 6.7e-104 | 58.47 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0035879.1 | 6.7e-104 | 58.47 | gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... | [more] |
KAA0047792.1 | 6.7e-104 | 58.47 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V4M1 | 1.1e-104 | 58.74 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093... | [more] |
A0A5A7SMH8 | 3.2e-104 | 58.47 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... | [more] |
A0A5D3CPJ6 | 3.2e-104 | 58.47 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... | [more] |
A0A5A7TWB9 | 3.2e-104 | 58.47 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031... | [more] |
A0A5D3CSZ6 | 3.2e-104 | 58.47 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... | [more] |
Match Name | E-value | Identity | Description | |