Moc07g09520 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g09520
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMuDRA-like transposase
Locationchr7: 7313960 .. 7315135 (-)
RNA-Seq ExpressionMoc07g09520
SyntenyMoc07g09520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGTAATGTTAGTATATACACATTGTGTACGCCCAAGTATGAATTAGAAACGCTTCTTAATGCGAATGCCGAACCAATCTACCCATTGGGTGATGAGGAGGACTGGGCTTTACCCGACGACTTTGTTGAGTACACCATTGAGCCTCCGAAGTTCGTTCCGAGAGTTGGAAGACGGCAAACGGTATGGATACCTTCGGCAGGTGAGCCTCAACAGATACATAAATGCAGTAGGTGTAGAATCCAAGGGTATAATAAGAAAACTTGCCGCCAACCATTATGAACAATAGAGTCTTAGTTCGATGTATGCCTTACTTATATTCATTTATTTTTTTTTGTGTGTTGGGAAACAAATCATCATATATTAGGGCGAAATCTTGATAAAATTGTATCTAACTTAACCGACTTTGGGCGAGAATTATTGTTGTTTTCGGGCGCGATGTTGATATTCTCGCCCATGAAATATTACAGTGAACATCATTCCTGTCGATGTATCTTTTTTTTGGGTGAAATCTTGTTACTTTCGCCCGTGAAATATTCTAGTGAATTCCATTGCACTCGCTGAAATATTTTTCAGGCGAGAAAGCCCGATTTCGCCCGAATTTTTTCCATACTTAACATTTTTTGGCCCAAATTTTCATAGTTTATGTTGTGTTCAATTGCAAAATTGGTTTGCACAGTTCGTTCGTTTTATGTATTAGATTGCTATTTTAATATAGAAGTCTTGTAGGAAGCAAATCAATTAGTTTGTACAAATGAGGTTATAAAATGATGCCATAATGGTAATAATTCAACTGGATTCAAAAGACTGATCTGTTTGCTCACATTTCTATGGCTAATTTCTCCTTAAAGAAATTAATTTTGTCATGAGTTAAAGTGGCCATATTTGACCCTATTACATCATACCCGAAGTTGCGCAATCACCAAATCCGCTTTGGTAGGGTGCAGACGTTACATGACGAACGCACCATGGTACGTTCGGTAATGTCGACCTCAGTACCTGCACACCGGCCCTGTGCATTAATGCTGGTAGGACAACGATCATCGACCTCAACTCAGACTCCAGAGCCGACAATAGTGTCATCGACATCATTAAATCCCACGCGATGATCTCATCCTCTTGCAGATCGATGCTAAGCATAATCTAGTGGTTGCCACCGATGTTGTATGGTAG

mRNA sequence

ATGCATCGTAATGTTAGTATATACACATTGTGTACGCCCAAGTATGAATTAGAAACGCTTCTTAATGCGAATGCCGAACCAATCTACCCATTGGGTGATGAGGAGGACTGGGCTTTACCCGACGACTTTGTTGAGTACACCATTGAGCCTCCGAAGTTCGTTCCGAGAGTTGGAAGACGGCAAACGACGTTACATGACGAACGCACCATGGTACGTTCGGTAATGTCGACCTCAGTACCTGCACACCGGCCCTGTGCATTAATGCTGATCGATGCTAAGCATAATCTAGTGGTTGCCACCGATGTTGTATGGTAG

Coding sequence (CDS)

ATGCATCGTAATGTTAGTATATACACATTGTGTACGCCCAAGTATGAATTAGAAACGCTTCTTAATGCGAATGCCGAACCAATCTACCCATTGGGTGATGAGGAGGACTGGGCTTTACCCGACGACTTTGTTGAGTACACCATTGAGCCTCCGAAGTTCGTTCCGAGAGTTGGAAGACGGCAAACGACGTTACATGACGAACGCACCATGGTACGTTCGGTAATGTCGACCTCAGTACCTGCACACCGGCCCTGTGCATTAATGCTGATCGATGCTAAGCATAATCTAGTGGTTGCCACCGATGTTGTATGGTAG

Protein sequence

MHRNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQTTLHDERTMVRSVMSTSVPAHRPCALMLIDAKHNLVVATDVVW
Homology
BLAST of Moc07g09520 vs. NCBI nr
Match: XP_022155156.1 (uncharacterized protein LOC111022299 [Momordica charantia])

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 1   MHRNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRR 60
           MHRNVSIYTLC+PKY+LETLLN  AEPIYPLGDEEDW LPDDFVEYTIEPPKFV RVGRR
Sbjct: 183 MHRNVSIYTLCSPKYKLETLLNTYAEPIYPLGDEEDWPLPDDFVEYTIEPPKFVARVGRR 242

Query: 61  QT 63
           QT
Sbjct: 243 QT 244

BLAST of Moc07g09520 vs. NCBI nr
Match: XP_022149027.1 (uncharacterized protein LOC111017546 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-17
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 1  MHRNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRR 60
          M RNV+ YT C+PKY LETL+ A AEPIYPL DE+DW LP+ FVE+ IEPPK++PRVGR 
Sbjct: 20 MFRNVNRYTFCSPKYSLETLITAYAEPIYPLEDEDDWVLPNHFVEFPIEPPKYIPRVGRW 79

Query: 61 QT 63
          QT
Sbjct: 80 QT 81

BLAST of Moc07g09520 vs. NCBI nr
Match: XP_022157237.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 5.8e-17
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 0

Query: 3   RNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 62
           RN+S+++LC+ +Y++ETL+   AEP+YPLGDEEDW LPDD+V  TI+PPKFVPRVGR QT
Sbjct: 484 RNISVHSLCSDRYQIETLILGYAEPVYPLGDEEDWILPDDYVPKTIKPPKFVPRVGRCQT 543

Query: 63  T 64
           T
Sbjct: 544 T 544

BLAST of Moc07g09520 vs. NCBI nr
Match: XP_022147770.1 (uncharacterized protein LOC111016625 [Momordica charantia])

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0

Query: 3   RNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 62
           RN+S+++LC+ +Y++ETL+   AEP+YPLGDEEDW LPDD+V  TI+PPKFVP VGR QT
Sbjct: 118 RNISVHSLCSDRYQIETLILGYAEPVYPLGDEEDWILPDDYVPKTIKPPKFVPCVGRHQT 177

Query: 63  TLHDERTMVRSV 75
           T       VR V
Sbjct: 178 TRIPSAGEVRQV 189

BLAST of Moc07g09520 vs. NCBI nr
Match: XP_022151607.1 (uncharacterized protein LOC111019519 [Momordica charantia])

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 4   NVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 63
           NV+ YTLC+P Y L+TL+NA AEP+YPLGD+EDW +PDDFV+  +EPPK+VPRVG+ QT
Sbjct: 105 NVNKYTLCSPAYTLQTLINAYAEPVYPLGDDEDWIIPDDFVDRKVEPPKYVPRVGQCQT 163

BLAST of Moc07g09520 vs. ExPASy TrEMBL
Match: A0A6J1DQV1 (uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022299 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.1e-25
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 1   MHRNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRR 60
           MHRNVSIYTLC+PKY+LETLLN  AEPIYPLGDEEDW LPDDFVEYTIEPPKFV RVGRR
Sbjct: 183 MHRNVSIYTLCSPKYKLETLLNTYAEPIYPLGDEEDWPLPDDFVEYTIEPPKFVARVGRR 242

Query: 61  QT 63
           QT
Sbjct: 243 QT 244

BLAST of Moc07g09520 vs. ExPASy TrEMBL
Match: A0A6J1D6P7 (uncharacterized protein LOC111017546 OS=Momordica charantia OX=3673 GN=LOC111017546 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 1  MHRNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRR 60
          M RNV+ YT C+PKY LETL+ A AEPIYPL DE+DW LP+ FVE+ IEPPK++PRVGR 
Sbjct: 20 MFRNVNRYTFCSPKYSLETLITAYAEPIYPLEDEDDWVLPNHFVEFPIEPPKYIPRVGRW 79

Query: 61 QT 63
          QT
Sbjct: 80 QT 81

BLAST of Moc07g09520 vs. ExPASy TrEMBL
Match: A0A6J1DU12 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC111023994 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 0

Query: 3   RNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 62
           RN+S+++LC+ +Y++ETL+   AEP+YPLGDEEDW LPDD+V  TI+PPKFVPRVGR QT
Sbjct: 484 RNISVHSLCSDRYQIETLILGYAEPVYPLGDEEDWILPDDYVPKTIKPPKFVPRVGRCQT 543

Query: 63  T 64
           T
Sbjct: 544 T 544

BLAST of Moc07g09520 vs. ExPASy TrEMBL
Match: A0A6J1D127 (uncharacterized protein LOC111016625 OS=Momordica charantia OX=3673 GN=LOC111016625 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.2e-17
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0

Query: 3   RNVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 62
           RN+S+++LC+ +Y++ETL+   AEP+YPLGDEEDW LPDD+V  TI+PPKFVP VGR QT
Sbjct: 118 RNISVHSLCSDRYQIETLILGYAEPVYPLGDEEDWILPDDYVPKTIKPPKFVPCVGRHQT 177

Query: 63  TLHDERTMVRSV 75
           T       VR V
Sbjct: 178 TRIPSAGEVRQV 189

BLAST of Moc07g09520 vs. ExPASy TrEMBL
Match: A0A6J1DDZ3 (uncharacterized protein LOC111019519 OS=Momordica charantia OX=3673 GN=LOC111019519 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.1e-17
Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 4   NVSIYTLCTPKYELETLLNANAEPIYPLGDEEDWALPDDFVEYTIEPPKFVPRVGRRQT 63
           NV+ YTLC+P Y L+TL+NA AEP+YPLGD+EDW +PDDFV+  +EPPK+VPRVG+ QT
Sbjct: 105 NVNKYTLCSPAYTLQTLINAYAEPVYPLGDDEDWIIPDDFVDRKVEPPKYVPRVGQCQT 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155156.11.7e-2490.32uncharacterized protein LOC111022299 [Momordica charantia][more]
XP_022149027.14.4e-1769.35uncharacterized protein LOC111017546 [Momordica charantia][more]
XP_022157237.15.8e-1767.21protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia][more]
XP_022147770.11.3e-1659.72uncharacterized protein LOC111016625 [Momordica charantia][more]
XP_022151607.11.7e-1667.80uncharacterized protein LOC111019519 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DQV18.1e-2590.32uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1D6P72.1e-1769.35uncharacterized protein LOC111017546 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DU122.8e-1767.21protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1D1276.2e-1759.72uncharacterized protein LOC111016625 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DDZ38.1e-1767.80uncharacterized protein LOC111019519 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g09520.1Moc07g09520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding