Moc07g04400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g04400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr7: 3788610 .. 3789188 (+)
RNA-Seq Expression	Moc07g04400
Synteny	Moc07g04400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCGGGAGGGATGAAAGATTGGGTAGAGACGAATGAACAGGTAGTTGCCTTTATCAGATTGTGTTTATCGATGAATGTGGCAAGTCTCATAGCAAACGAAACGACAGCAATAGATTTGATGAAAGCACTGGAGAATAGGTACGAGAAACCCTCAGATAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATAGAAAAGAACACTTCTGTCAATTCCCACATAAATGAGGTCACAAAATTAATCAATCAATTGGCACCAGTTAAGATTACTTTTAGTGACGAAGTTACTGCTATTCAGTTGCTAACATCTTTAGCTGAAAGTTGGGAAACGATGAAGATAGTAGTGTCCAATTCGTTAGGAGAGAAATATTTGAAATTTTCAGAAATTTGTGATGCGGTAATTGCTGAACAAATTCGCAGAAAGGGGAGTGGAAAAGAATCTACTTCCACACAAGACTCAGAATTGGCTGTCGAAAAATGTAAACGGAATTTGGCGTCTGATGACAGGCAGTAG

mRNA sequence

ATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCGGGAGGGATGAAAGATTGGGTAGAGACGAATGAACAGGTAGTTGCCTTTATCAGATTGTGTTTATCGATGAATGTGGCAAGTCTCATAGCAAACGAAACGACAGCAATAGATTTGATGAAAGCACTGGAGAATAGGTACGAGAAACCCTCAGATAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATAGAAAAGAACACTTCTGTCAATTCCCACATAAATGAGGTCACAAAATTAATCAATCAATTGGCACCAGTTAAGATTACTTTTAGTGACGAAGTTACTGCTATTCAGTTGCTAACATCTTTAGCTGAAAGTTGGGAAACGATGAAGATAGTAGTGTCCAATTCGTTAGGAGAGAAATATTTGAAATTTTCAGAAATTTGTGATGCGGTAATTGCTGAACAAATTCGCAGAAAGGGGAGTGGAAAAGAATCTACTTCCACACAAGACTCAGAATTGGCTGTCGAAAAATGTAAACGGAATTTGGCGTCTGATGACAGGCAGTAG

Coding sequence (CDS)

ATGCAGATTAAGGATTACTTGACCTGCAAGAAGTTGAATAAAGCTTTAAAGGAACGACCGGGAGGGATGAAAGATTGGGTAGAGACGAATGAACAGGTAGTTGCCTTTATCAGATTGTGTTTATCGATGAATGTGGCAAGTCTCATAGCAAACGAAACGACAGCAATAGATTTGATGAAAGCACTGGAGAATAGGTACGAGAAACCCTCAGATAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATAGAAAAGAACACTTCTGTCAATTCCCACATAAATGAGGTCACAAAATTAATCAATCAATTGGCACCAGTTAAGATTACTTTTAGTGACGAAGTTACTGCTATTCAGTTGCTAACATCTTTAGCTGAAAGTTGGGAAACGATGAAGATAGTAGTGTCCAATTCGTTAGGAGAGAAATATTTGAAATTTTCAGAAATTTGTGATGCGGTAATTGCTGAACAAATTCGCAGAAAGGGGAGTGGAAAAGAATCTACTTCCACACAAGACTCAGAATTGGCTGTCGAAAAATGTAAACGGAATTTGGCGTCTGATGACAGGCAGTAG

Protein sequence

MQIKDYLTCKKLNKALKERPGGMKDWVETNEQVVAFIRLCLSMNVASLIANETTAIDLMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEVTAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTSTQDSELAVEKCKRNLASDDRQ

Homology

[Close]

BLAST of Moc07g04400 vs. NCBI nr
Match: CAN60358.1 (hypothetical protein VITISV_034722 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 6.2e-33
Identity = 83/174 (47.70%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  I NE T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNIVNEKTTAD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+ + +N SV  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLNMVENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWE M++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWEVMRMTVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS 197

[Close]

BLAST of Moc07g04400 vs. NCBI nr
Match: RVW31691.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 6.2e-33
Identity = 82/174 (47.13%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  +  E T  D
Sbjct: 64  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTAD 123

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N SV  H+NE   + NQL+ V+I F DE+
Sbjct: 124 LMKALSGMYEKPSANNKVHLMKKLFNLKMTENASVAQHLNEFNTITNQLSSVEIDFDDEI 183

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SLA SWE M++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 184 RALIVLASLANSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS 237

[Close]

BLAST of Moc07g04400 vs. NCBI nr
Match: RVW44710.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-33
Identity = 81/174 (46.55%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS ++A  +  E T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSIAHNVVKEKTTAD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL + YEKPS NNKV+L+++ FN+++ KN SV  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSDMYEKPSANNKVHLMKKLFNLKMTKNASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWE M++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS 197

[Close]

BLAST of Moc07g04400 vs. NCBI nr
Match: RVW73171.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-33
Identity = 82/174 (47.13%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  +  E T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTTD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N SV  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMTENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWE M++VVSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWEAMRMVVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS 197

[Close]

BLAST of Moc07g04400 vs. NCBI nr
Match: CAN60145.1 (hypothetical protein VITISV_019412 [Vitis vinifera])

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-32
Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  I  E T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNIVKEKTIXD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N SV  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSYVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWETM++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWETMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGS 197

[Close]

BLAST of Moc07g04400 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 49/167 (29.34%), Postives = 91/167 (54.49%), Query Frame = 0


Query: 2   QIKDYLTCKKLNKAL---KERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAI 61
           +++D L  + L+K L    ++P  MK  DW + +E+  + IRL LS +V + I +E TA 
Sbjct: 23  RMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTAR 82

Query: 62  DLMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDE 121
            +   LE+ Y   +  NK+YL ++ + + + + T+  SH+N    LI QLA + +   +E
Sbjct: 83  GIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEE 142

Query: 122 VTAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRK 164
             AI LL SL  S++ +   + +  G+  ++  ++  A++  +  RK
Sbjct: 143 DKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKMRK 187

[Close]

BLAST of Moc07g04400 vs. ExPASy TrEMBL
Match: A0A0D3AEM1 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 87/193 (45.08%), Postives = 128/193 (66.32%), Query Frame = 0


Query: 1   MQIKDYLTCKKLNKALKERPGGM--KDWVETNEQVVAFIRLCLSMNVASLIANETTAIDL 60
           MQI+DYL  KKL++ L ++P  M   +W   + QV+  IRL LS NVA  +  E T   L
Sbjct: 24  MQIEDYLYGKKLHQPLSKKPEKMDQDEWELLDRQVLGVIRLTLSKNVAHNVVKEKTTEGL 83

Query: 61  MKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEVT 120
           MK L + YEKPS N+KV+L+++ F++++E+   V +HINE   ++NQL+ V+I F DEV 
Sbjct: 84  MKVLSDMYEKPSANSKVFLMKKLFHLKMEEGGLVTAHINEFNTIVNQLSSVEIEFEDEVR 143

Query: 121 AIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTSTQDSELA 180
           A+ LL SL  SWE+M++ VSNS+G + LKF+++ D ++AE++RR  SG+ STS   S   
Sbjct: 144 ALILLASLPNSWESMRVAVSNSVGTQKLKFNDVRDRILAEEVRRIDSGEASTS---SAFN 203

Query: 181 VEKCKRNLASDDR 192
           VE   RN   ++R
Sbjct: 204 VENRGRNPDRNNR 213

[Close]

BLAST of Moc07g04400 vs. ExPASy TrEMBL
Match: A0A7N2R8N6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 85/183 (46.45%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L E+P  MK  +W   + QV+  IRL LS +VA  +  E T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGEKPEAMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTAD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N SV  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTSTQDSEL 180
            A+ +L SL  SWE M++ VSNS G++ LK+++I D ++AE+IRR+ +G+  TS   S L
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGE--TSGSGSAL 203

[Close]

BLAST of Moc07g04400 vs. ExPASy TrEMBL
Match: A0A7N2LG47 (Integrase catalytic domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 81/174 (46.55%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  +  E T +D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPEAMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTVD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N +V  H+NE   + NQL+ V+I F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENATVAQHLNEFNTITNQLSSVEIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWETM++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWETMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGESSGS 197

[Close]

BLAST of Moc07g04400 vs. ExPASy TrEMBL
Match: A0A0D3BM55 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-33
Identity = 87/193 (45.08%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 1   MQIKDYLTCKKLNKALKERPGGM--KDWVETNEQVVAFIRLCLSMNVASLIANETTAIDL 60
           MQ++DYL  KKL++ L ++P  M   +W   + QV+  IRL LS NVA  +A E T   L
Sbjct: 1   MQMEDYLYGKKLHQTLSKKPEKMDQDEWELLDRQVLGVIRLTLSKNVAHNVAKEKTTEGL 60

Query: 61  MKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEVT 120
           MK L + YEKPS NNKV+L+++ F++++E+   V +H+NE   ++NQL+ V+I F DEV 
Sbjct: 61  MKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGLVAAHVNEFNTIVNQLSSVEIEFDDEVR 120

Query: 121 AIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTSTQDSELA 180
           A+ LL SL  SWE M+  VSNS+G + LKF+++ D ++AE++RR  SG+ STS   S   
Sbjct: 121 ALILLASLPNSWEPMRAAVSNSVGTQKLKFNDVRDRILAEEVRRIDSGEASTS---SAFN 180

Query: 181 VEKCKRNLASDDR 192
           VE   RN   ++R
Sbjct: 181 VENRGRNPDRNNR 190

[Close]

BLAST of Moc07g04400 vs. ExPASy TrEMBL
Match: A0A7N2KY95 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-33
Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 1   MQIKDYLTCKKLN-KALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAID 60
           MQI+DYL  +KL+   L  +P  MK  +W   + QV+  IRL LS +VA  +  E T  D
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPEAMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTAD 83

Query: 61  LMKALENRYEKPSDNNKVYLVRRFFNIQIEKNTSVNSHINEVTKLINQLAPVKITFSDEV 120
           LMKAL   YEKPS NNKV+L+++ FN+++ +N SV  H+NE   + NQL+ VKI F DE+
Sbjct: 84  LMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNSITNQLSSVKIDFDDEI 143

Query: 121 TAIQLLTSLAESWETMKIVVSNSLGEKYLKFSEICDAVIAEQIRRKGSGKESTS 172
            A+ +L SL  SWE M++ VSNS G++ LK+++I D ++AE+IRR+ +G+ S S
Sbjct: 144 RALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGESSGS 197

[Close]

BLAST of Moc07g04400 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 9.6e-08
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 1  MQIKDYLTCKKLNKALKERPGGMK--DWVETNEQVVAFIRLCLSMNVASLIANETTAIDL 60
          M+I+DYL  KKL++ L ++   M   DW     QV+  IRL +S N+A  +A E +   L
Sbjct: 19 MKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGL 78

Query: 61 MKALENRYEKPSDNNKV 76
          MK L + Y+KPS NN V
Sbjct: 79 MKVLSDIYKKPSTNNTV 95

The following BLAST results are available for this feature:

BLAST of Moc07g04400 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN60358.1	6.2e-33	47.70	hypothetical protein VITISV_034722 [Vitis vinifera]	[more]
RVW31691.1	6.2e-33	47.13	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW44710.1	8.1e-33	46.55	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW73171.1	8.1e-33	47.13	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN60145.1	1.1e-32	47.70	hypothetical protein VITISV_019412 [Vitis vinifera]	[more]

BLAST of Moc07g04400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	6.3e-12	29.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc07g04400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D3AEM1	1.3e-33	45.08	CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376...	[more]
A0A7N2R8N6	1.8e-33	46.45	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A7N2LG47	1.8e-33	46.55	Integrase catalytic domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV...	[more]
A0A0D3BM55	2.3e-33	45.08	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1	[more]
A0A7N2KY95	2.3e-33	47.13	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Moc07g04400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29785.1	9.6e-08	42.86	unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 26..164 e-value: 4.3E-25 score: 88.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..192
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..173
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g04400.1	Moc07g04400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding