Moc07g04140 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g04140
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Locationchr7: 3586064 .. 3590245 (-)
RNA-Seq ExpressionMoc07g04140
SyntenyMoc07g04140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTAAATGCAATGACCCCTTCTTCATCCTCTAATACTCACAATAATTTTTGGTTGTCAGATAGTGGCTGCAACGCACATGTGACCAATGATTTAGACAATTTGAATCTAGTTGATTCTTATAATGGAGAGGAATTCGTCACAGTCGGCAATGGACAATCTTTAAACATTTCGCACACAGGCAGTGGTATACTTTCAGCATCCTCGCACGCATTTACCATTTCCAATGTGCTCCATGCTCCTGATTTAGCCACAAATCTTCTTTCAGTTCATAAATTTTGTCTTGATAATCATTGCATTTTTGTATATGACTCTGACTGGTTCCTCATTCAGGATAAGGTTACAGACACTACTCTCTATAAAGGAAAGAGTGTTAATGGACTCTACCCCATCCCTAGTTCGTCTACTTTGTCGTCAGCCCGCAATGAGTTACATCCTAAAAACTGTGCTCTTCTTGCAAAAGCAGGGTCTTATCTCTGGCATCATCGGCTTGGCCATCATTCACCAAAAATATTACGTCATGCTTTGTCTACATTTGGTTTGTCAATATCTCATTCCTTTAATACTTGTCAATGCACTAGTTGTCTTAAGGCAAAAATGTCTAAACTATCATTTCCTATGTCTTACTCCTCTTCTTTTGCTCCTCTTGAATTTGTTCACAGTGATGTTTGGGGAACTTCTCCTGTTATTTCTCTTACTGGATGTCGCTATTATGTTAGTCTTGTGGACAATTTTAGCAAGTTTACCTGGCTTTTTCCAATTGCAAATAAATCTGATGTGAGTGCTATTCTTCATAAATTTGTGCCATTTGCTGAAAATCTTCTCTCATCTAAGCTTAAAACTTTTCATTCTAATGGTGGTGGTGAGTTTGTTAATTCGTCTGTTTCTTCCTTATTTGAATTTAAAGGTATTTTACATCAAAAATCTTGTCCTTATACTCCCGAGCAAAATGGTGTTGCTGAATGTAAACACATGCACATTTTTGAAACTGCTCTATCATTGATGTTTCATTATTCAACGCCTGCTGAATTTTGGCCTTATGCATTTTCTACCACCGTCTTTCTTATAAATAGAATGCCCACTCCTTCTCTTGTTATGCTTTCGCCTTTTGAAAAACTTTTTGGTAAGACTCCAGATTTACTTGGATTTAAAAGTTTTTGGATGTGCTTGTTACCTCTTATTAGAACCATTCACTAAACGTAAGCTTGAGCCCAAAACATCTCAACATGTTTTTCTTGGCTATACACTTGACTTCAAAGGTTATATTTGTTTTAATCCCACTACGCGTAAGTCTATAGTTTATCGTCATGTTGTATTCCATGAAACTGTCTTCCCTTTTGCCCAACCTAATACTCATACTTCCCATGTCTCCTCCTCCATAGATCCTACAGTTCTTTTCAAGCACCTGTTAACCTTGAACCACGCCCAACCATTACGTCATTACCAGCCGCCCAGTCCTTCTGACCACCCGGTCGTTGTTTCTTCTTCCTCCATTGCTCCAAATTTTTATGCTGTCTCTGTCCCACCTACACATAACATGTCCTTTTCTTCTGCTCCCTTGCCGACTGCTATGACTACTGCCTCCATTATTGTTACGCCTGCTCCCGTTCTCCTTGAGGCCTTCTCTCCTCATAAGGACCCTACATTATCCTCTTTTCCTATTGTTTCACCAAGCGATCCTACTTGCCCATCCACTTCTTGCAGTTCAGTCACTGATGTTCGCCCCATTAATGCTCATCTGATGCAAACATGGGCAAAGTCGGGTATTTTTAAGCCCAGGGCCTATTTAGTTCTGAGTGAGTCCATAACTATCCATACAAAACCTTCTCCATCCACTGAGGCTGCCCAGTTTTCTGAATGGAGAGCTGCCATGTCAGATAAATTTTTAGCTCTCCAGGAGCAAGGTACATGGTCACTTGTCCCTCGAACACCCGATATGAATGTTGTTGGTTGTAAATGGGTGTTTCACACTAAGTTCAATTCTGATGGCTCTACCGCCCGTTATAAGGCTCGATTGATGGCTAAGGGTTATCATAAAATGGAGGGCTTTGATTTTGAAGAGACCTTCAGCCCTGTTGTTAAAAAGCCTACTATTCGAGTTGTACTGTCTCTTGCTGCTCATTTTAATTGGTCACTTACTCAGCTTGACGTTAAGAATGTCTTTTTGCATGGTAATCTTCAGAAAGATGTCTTTATGTATCAGTCCGTTTGTTTTATTGATACGTCTTGCCCTGATTATGTTTGCTGCTTACACAAAAGTTTGTATGGCCTAAAACAGGCTCCTCGGGCTTGGTTTGACCGCTTCACCAATTATCTGTTCACACTTGGGTTTGAGGCTTCTCTTACTGATACTTCTTTATTTGTACGGTCTGTTGATGGATCTCTGACTTTTCTCCTCTTATACGTGGATGATATTATAATCACTGGTCCCGATTCTTCCTACATTACTGTTCTCAAGAAAGCTCTAGCTACTGAATTCCAAATATCTGATCTTGGTGCTCTGAGGTACTTTTTGGGTTTAGAAATTAAGTCCTTGCCTACTGTTATTTTTGTGAACCAAGCAGAGTACTTACAAGATTTATTAGTCCGTTCTGGAATGTGCTCGGCCAAATCATGCTCCACTCCTATGTCCACTTCTATTGATCTCCATGCTTCTACTCCCATGTTTACTGATGCATCTCTCTATCGTCAATTGGTGGTTTCATTACAATACTTGACGTTTACTCGTCTTGACATTACTTTCTCTGTCAATCGGGTTAGTCAGTTCATGCAAAATCCCACAGTTTTTCATTATTCTGCAGTTAAACGTATTTAGCGATATCTAAATGGCACCAAGGATCTTGGCATTTTGTTCCATAAGAGTTCCTTGACCCTTTCTGCCTTTTGTGATGTCGATTGGGCTGGAGATGCTATTAATCGCCGATCTACCACTGGCTTTGTTACATTTCTTGGCTCGAGCCCTATTTCTTGGTCGACCAAAAAGCAATATACTGTGTCTCGTTCTTCTACTGAAGCTGAGTATCGGTCTTTGGCCACTACTACTGCTGACTTATACTGGTTACGACAACTTTTATGTGACTTGCATGTCTATTTGAAAGATCCCCTCCCCCCTCTCCCATATTATGGTGTGATAATATTTCAGCAATATCTCTTGCCAGCAACCCGGTGTTCCATGCTCGCACCAAACACATAGAAATTGATTATCATTTTGTTCGTGAAAAGGTCGTGTGCAAGGATATTTCTGTTCGCTTTGTGTCATCCAAAGACCAAATTGCTGATTTATTTACCAAGGCGCTGTCTACACAAGCCTTTTTATCTTTACGTAGCAAACTCGTGTTTTCTGTTCAACCTTGAGTTTGAGGGGGTGTATTAGGTTGATTGTTATAACCTCCTCTAGTTATGATTCTTCTCTAAATTAGCTAACTTATTCAGTATTATTTAAATTAGTTATACTTAGGCTCTACAAGAGGGCTGAATGTATTCACTTCAAAATCATCTCAATACAGAAATTGTTCTATCTCCATCCCTCTCTTTAGTTCTGTTACTCGGCACCGTCCGAGGTGGAGGACTTGGTCATTATTTTTTTATCAAATCGCCAATATTGAAGATATATTGTCCGGGTTTGATCTGCTCAACACGACAAGCTCGACTTCAACTCCGACCAGGGTAACTCATGTCGGAACCTAAACCTATAAATAGAGGGCCTCATTTCAACATCAAGTATCGAATTTCTCCTCGAATTAATATTGAGTCCGAGCTATTTACTGACTTGAGCATCGGAGATTTTGCCCTCTTGTGCAGGTCTTTCCGTTGTGATTCAGGTCGGAGCAAGGACTGAGTTCGACCTGGACCAAGGTTTGACGTTGTGCATTTCTTTGCATAAACAAAGCTTGGGTAGGAGGCTTGTGAATTTGTGTAAAATGCATGATAATGCAAAATTACAAAAGCAAATAATTAAAAGACAAAATATGCAATAAAAAGAAATGGACCAAAATATTTTAATAACAAATAGTAAATGACAAAAATAAATGACTTGACTCTCAATAGTCCCTAGTGAAGTCGCCAAGTTGTCGCAACGTCATCGCGATGGGGAGCGACCGTCATCCCCTGAAGGGTCTCTTTCGAGACAAGGGTTTGGAGTCGTCACCAATCACCTACGAGGCCGGATTTGTCACCTAA

mRNA sequence

ATGGCGGTAAATGCAATGACCCCTTCTTCATCCTCTAATACTCACAATAATTTTTGGTTGTCAGATAGTGGCTGCAACGCACATGTGACCAATGATTTAGACAATTTGAATCTAGTTGATTCTTATAATGGAGAGGAATTCGTCACAGTCGGCAATGGACAATCTTTAAACATTTCGCACACAGGCAGTGGTATACTTTCAGCATCCTCGCACGCATTTACCATTTCCAATGTGCTCCATGCTCCTGATTTAGCCACAAATCTTCTTTCAGTTCATAAATTTTGTCTTGATAATCATTGCATTTTTGTATATGACTCTGACTGGTTCCTCATTCAGGATAAGGTTACAGACACTACTCTCTATAAAGGAAAGAGTGTTAATGGACTCTACCCCATCCCTAGTTCGTCTACTTTGTCGTCAGCCCGCAATGAGTTACATCCTAAAAACTGTGCTCTTCTTGCAAAAGCAGGGTCTTATCTCTGGCATCATCGGCTTGGCCATCATTCACCAAAAATATTACGTCATGCTTTGTCTACATTTGATCCTACAGTTCTTTTCAAGCACCTGTTAACCTTGAACCACGCCCAACCATTACGTCATTACCAGCCGCCCAGTCCTTCTGACCACCCGGTCGTTGTTTCTTCTTCCTCCATTGCTCCAAATTTTTATGCTGTCTCTGTCCCACCTACACATAACATGTCCTTTTCTTCTGCTCCCTTGCCGACTGCTATGACTACTGCCTCCATTATTGTTACGCCTGCTCCCGTTCTCCTTGAGGCCTTCTCTCCTCATAAGGACCCTACATTATCCTCTTTTCCTATTGTTTCACCAAGCGATCCTACTTGCCCATCCACTTCTTGCAGTTCAGTCACTGATGTTCGCCCCATTAATGCTCATCTGATGCAAACATGGGCAAAGTCGGGTCTTTCCGTTGTGATTCAGGTCGGAGCAAGGACTGAGTTCGACCTGGACCAAGTGAAGTCGCCAAGTTGTCGCAACGTCATCGCGATGGGGAGCGACCGTCATCCCCTGAAGGGTCTCTTTCGAGACAAGGGTTTGGAGTCGTCACCAATCACCTACGAGGCCGGATTTGTCACCTAA

Coding sequence (CDS)

ATGGCGGTAAATGCAATGACCCCTTCTTCATCCTCTAATACTCACAATAATTTTTGGTTGTCAGATAGTGGCTGCAACGCACATGTGACCAATGATTTAGACAATTTGAATCTAGTTGATTCTTATAATGGAGAGGAATTCGTCACAGTCGGCAATGGACAATCTTTAAACATTTCGCACACAGGCAGTGGTATACTTTCAGCATCCTCGCACGCATTTACCATTTCCAATGTGCTCCATGCTCCTGATTTAGCCACAAATCTTCTTTCAGTTCATAAATTTTGTCTTGATAATCATTGCATTTTTGTATATGACTCTGACTGGTTCCTCATTCAGGATAAGGTTACAGACACTACTCTCTATAAAGGAAAGAGTGTTAATGGACTCTACCCCATCCCTAGTTCGTCTACTTTGTCGTCAGCCCGCAATGAGTTACATCCTAAAAACTGTGCTCTTCTTGCAAAAGCAGGGTCTTATCTCTGGCATCATCGGCTTGGCCATCATTCACCAAAAATATTACGTCATGCTTTGTCTACATTTGATCCTACAGTTCTTTTCAAGCACCTGTTAACCTTGAACCACGCCCAACCATTACGTCATTACCAGCCGCCCAGTCCTTCTGACCACCCGGTCGTTGTTTCTTCTTCCTCCATTGCTCCAAATTTTTATGCTGTCTCTGTCCCACCTACACATAACATGTCCTTTTCTTCTGCTCCCTTGCCGACTGCTATGACTACTGCCTCCATTATTGTTACGCCTGCTCCCGTTCTCCTTGAGGCCTTCTCTCCTCATAAGGACCCTACATTATCCTCTTTTCCTATTGTTTCACCAAGCGATCCTACTTGCCCATCCACTTCTTGCAGTTCAGTCACTGATGTTCGCCCCATTAATGCTCATCTGATGCAAACATGGGCAAAGTCGGGTCTTTCCGTTGTGATTCAGGTCGGAGCAAGGACTGAGTTCGACCTGGACCAAGTGAAGTCGCCAAGTTGTCGCAACGTCATCGCGATGGGGAGCGACCGTCATCCCCTGAAGGGTCTCTTTCGAGACAAGGGTTTGGAGTCGTCACCAATCACCTACGAGGCCGGATTTGTCACCTAA

Protein sequence

MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTFDPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSSAPLPTAMTTASIIVTPAPVLLEAFSPHKDPTLSSFPIVSPSDPTCPSTSCSSVTDVRPINAHLMQTWAKSGLSVVIQVGARTEFDLDQVKSPSCRNVIAMGSDRHPLKGLFRDKGLESSPITYEAGFVT
Homology
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BLAST of Moc07g04140 vs. NCBI nr
Match: XP_022158189.1 (uncharacterized protein LOC111024722 [Momordica charantia])

HSP 1 Score: 568.2 bits (1463), Expect = 5.3e-158
Identity = 308/432 (71.30%), Postives = 309/432 (71.53%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120
           TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF 180
           YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 GLSISHSFNTCQCTSCLKAKMSKLSFPMSYSSSFAPLEFVHSDVWGXSPVISLTGCRYYV 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLVDNFSKFTWLFPIANKSDVSAILHKFVPFAENLLSSKLKTFHSNGGGEFVNSSVSSLF 300

Query: 301 ---DPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS 310
              DPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS
Sbjct: 301 EFKDPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS 360

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BLAST of Moc07g04140 vs. NCBI nr
Match: KAA0067173.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-35
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MAVN+M    SS   NNFWLSDSG N H+TN+L NLNL ++YNGEE VTVGNGQ LNI +
Sbjct: 353 MAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTVGNGQPLNIEN 412

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVT 117
           TGSG LS  SH F +S +LHAP LATNLLSVHKFCLDN+C+FV+ +D FLIQDKVT
Sbjct: 413 TGSGKLSTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFVFYTDGFLIQDKVT 468

[Close]
BLAST of Moc07g04140 vs. NCBI nr
Match: XP_016902697.1 (PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-32
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MA+N+M         NNF LSDSGCN H+TN+L NLNL ++YNGEE VTVGNGQ +NI +
Sbjct: 276 MAINSMNSQIFGENTNNFLLSDSGCNVHMTNELANLNLSNNYNGEETVTVGNGQPINIEN 335

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLI 112
           TGSG L   SH F +S +LHAP LATNLLSVHKFCLDN+C+F++D+DWFLI
Sbjct: 336 TGSGKLLTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFIFDTDWFLI 386

[Close]
BLAST of Moc07g04140 vs. NCBI nr
Match: KAA8528735.1 (hypothetical protein F0562_036090 [Nyssa sinensis])

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-32
Identity = 110/343 (32.07%), Postives = 174/343 (50.73%), Query Frame = 0 

Query: 3   VNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTG 62
           + AM   +SSN  +  W+SDSG + H+T DL NL + + Y G++ V VGNG  L I+HTG
Sbjct: 314 LTAMAVIASSNIPSTTWISDSGASNHITADLTNLAIHNEYQGKDHVAVGNGAGLTIAHTG 373

Query: 63  SGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYK 122
           S   +  S  F + N+LH P +A NLLS+++F  DN+C FV+ SD F ++D  T  TL++
Sbjct: 374 SSKFTCGSSTFALKNILHCPSIAANLLSIYQFTRDNNCYFVFYSDCFYVKDVKTGKTLFR 433

Query: 123 GKSVNGLYPIPSSSTLSSARNELHPKNCALL-AKAGSYLWHHRLGHHSPKILRHALSTFD 182
           G S +GLYP    + +S+       +  AL+  +    +WH RLGH +   L H +S  +
Sbjct: 434 GTSEHGLYPFRIHTQISTKSG----RPFALVGVRVSVPIWHSRLGHPANNTLSHLIS--N 493

Query: 183 PTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTH--NMSFSSAP 242
             +L     + +   PL     P P  H  + S+ S  PN    ++PP +    +  + P
Sbjct: 494 KCLLMHETASPDFNSPLEIVTEPLP--HIPLASTGS--PN---TTIPPPNPPTQNPPNVP 553

Query: 243 LPTAMTTASIIVTPAPVLLEAFSPHKDPTLSSFPIVSPSDPTCPSTSCSSVTDVRPINAH 302
           LP+   T +I++ P P++ E   PH  P  +   I  PS PT               N H
Sbjct: 554 LPSITPTTNILI-PPPLITEPTQPHTTPIPNPL-ITEPSPPT--------------TNLH 613

Query: 303 LMQTWAKSGLSVVIQVGARTEFDLDQVKSPSCRNVIAMGSDRH 343
            M T  ++G+S         + + + +  PS  + I++ ++RH
Sbjct: 614 PMVTRRQAGIS---------KPNPNHLTEPSASDSISLRANRH 618

[Close]
BLAST of Moc07g04140 vs. NCBI nr
Match: KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-32
Identity = 81/199 (40.70%), Postives = 115/199 (57.79%), Query Frame = 0 

Query: 7   TPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTGSGIL 66
           T ++ S+   N+W +D+G   H+T DL NLN    Y G++ +T+ NGQ+L+ISH+G   +
Sbjct: 376 TYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSSI 435

Query: 67  SASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYKGKSV 126
            A+ H F ++NVL  P +ATNLLSVH+FC DNHC F++DS+ F IQDK T   L++G S 
Sbjct: 436 HANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQLLFQGPSD 495

Query: 127 NGLYPIPSSSTLSSARNELHP--------KNCA------------------LLAKAGSYL 180
           +GLYP+P+SS    +   L P        K+CA                  L  +  + L
Sbjct: 496 HGLYPLPTSSITKHSAPSLQPPLHFQHYNKHCANHSPLQRNNYSDSPHTAYLGKQVSTVL 555

[Close]
BLAST of Moc07g04140 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.1e-20
Identity = 65/181 (35.91%), Postives = 96/181 (53.04%), Query Frame = 0 

Query: 7   TPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTGSGIL 66
           +P SS+N     WL DSG   H+T+D +NL+L   Y G + V V +G ++ ISHTGS  L
Sbjct: 324 SPYSSNN-----WLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSL 383

Query: 67  SASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYKGKSV 126
           S  S    + N+L+ P++  NL+SV++ C  N     +    F ++D  T   L +GK+ 
Sbjct: 384 STKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTK 443

Query: 127 NGLY--PIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTFDPTV 186
           + LY  PI SS  +S   +          +KA    WH RLGH +P IL   +S +  +V
Sbjct: 444 DELYEWPIASSQPVSLFASP--------SSKATHSSWHARLGHPAPSILNSVISNYSLSV 491

[Close]
BLAST of Moc07g04140 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-18
Identity = 60/171 (35.09%), Postives = 89/171 (52.05%), Query Frame = 0 

Query: 17  NFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTGSGILSASSHAFTIS 76
           N WL DSG   H+T+D +NL+    Y G + V + +G ++ I+HTGS  L  SS +  ++
Sbjct: 308 NNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLN 367

Query: 77  NVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYKGKSVNGLY--PIPS 136
            VL+ P++  NL+SV++ C  N     +    F ++D  T   L +GK+ + LY  PI S
Sbjct: 368 KVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS 427

Query: 137 SSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTFDPTVL 186
           S  +S     +    C   +KA    WH RLGH S  IL   +S     VL
Sbjct: 428 SQAVS-----MFASPC---SKATHSSWHSRLGHPSLAILNSVISNHSLPVL 470

[Close]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match: A0A6J1DYN6 (uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024722 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.6e-158
Identity = 308/432 (71.30%), Postives = 309/432 (71.53%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120
           TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF 180
           YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYLWHHRLGHHSPKILRHALSTF 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 GLSISHSFNTCQCTSCLKAKMSKLSFPMSYSSSFAPLEFVHSDVWGXSPVISLTGCRYYV 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLVDNFSKFTWLFPIANKSDVSAILHKFVPFAENLLSSKLKTFHSNGGGEFVNSSVSSLF 300

Query: 301 ---DPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS 310
              DPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS
Sbjct: 301 EFKDPTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSS 360

[Close]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match: A0A5A7VGG0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00280 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.5e-36
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MAVN+M    SS   NNFWLSDSG N H+TN+L NLNL ++YNGEE VTVGNGQ LNI +
Sbjct: 353 MAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTVGNGQPLNIEN 412

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVT 117
           TGSG LS  SH F +S +LHAP LATNLLSVHKFCLDN+C+FV+ +D FLIQDKVT
Sbjct: 413 TGSGKLSTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFVFYTDGFLIQDKVT 468

[Close]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match: A0A1S4E394 (uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.7e-33
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 0 

Query: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60
           MA+N+M         NNF LSDSGCN H+TN+L NLNL ++YNGEE VTVGNGQ +NI +
Sbjct: 276 MAINSMNSQIFGENTNNFLLSDSGCNVHMTNELANLNLSNNYNGEETVTVGNGQPINIEN 335

Query: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLI 112
           TGSG L   SH F +S +LHAP LATNLLSVHKFCLDN+C+F++D+DWFLI
Sbjct: 336 TGSGKLLTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFIFDTDWFLI 386

[Close]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match: A0A5J5ACM0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_036090 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-32
Identity = 110/343 (32.07%), Postives = 174/343 (50.73%), Query Frame = 0 

Query: 3   VNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTG 62
           + AM   +SSN  +  W+SDSG + H+T DL NL + + Y G++ V VGNG  L I+HTG
Sbjct: 314 LTAMAVIASSNIPSTTWISDSGASNHITADLTNLAIHNEYQGKDHVAVGNGAGLTIAHTG 373

Query: 63  SGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYK 122
           S   +  S  F + N+LH P +A NLLS+++F  DN+C FV+ SD F ++D  T  TL++
Sbjct: 374 SSKFTCGSSTFALKNILHCPSIAANLLSIYQFTRDNNCYFVFYSDCFYVKDVKTGKTLFR 433

Query: 123 GKSVNGLYPIPSSSTLSSARNELHPKNCALL-AKAGSYLWHHRLGHHSPKILRHALSTFD 182
           G S +GLYP    + +S+       +  AL+  +    +WH RLGH +   L H +S  +
Sbjct: 434 GTSEHGLYPFRIHTQISTKSG----RPFALVGVRVSVPIWHSRLGHPANNTLSHLIS--N 493

Query: 183 PTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTH--NMSFSSAP 242
             +L     + +   PL     P P  H  + S+ S  PN    ++PP +    +  + P
Sbjct: 494 KCLLMHETASPDFNSPLEIVTEPLP--HIPLASTGS--PN---TTIPPPNPPTQNPPNVP 553

Query: 243 LPTAMTTASIIVTPAPVLLEAFSPHKDPTLSSFPIVSPSDPTCPSTSCSSVTDVRPINAH 302
           LP+   T +I++ P P++ E   PH  P  +   I  PS PT               N H
Sbjct: 554 LPSITPTTNILI-PPPLITEPTQPHTTPIPNPL-ITEPSPPT--------------TNLH 613

Query: 303 LMQTWAKSGLSVVIQVGARTEFDLDQVKSPSCRNVIAMGSDRH 343
            M T  ++G+S         + + + +  PS  + I++ ++RH
Sbjct: 614 PMVTRRQAGIS---------KPNPNHLTEPSASDSISLRANRH 618

[Close]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match: A0A2N9ILA5 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54309 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-32
Identity = 104/309 (33.66%), Postives = 163/309 (52.75%), Query Frame = 0 

Query: 3   VNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISHTG 62
           + AM  ++SSN  +  W+SDSG + H+T DL NL + + Y G++ V VGNG  L I+HTG
Sbjct: 243 LTAMAATASSNIPSTTWISDSGASNHITADLTNLAIHNEYQGKDHVAVGNGAGLTIAHTG 302

Query: 63  SGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTLYK 122
           S   +  S  F + N+LH P +A NLLS+++F  DN+C FV+ SD F ++D  T  TL++
Sbjct: 303 SSKFTCGSSTFALKNILHCPSIAANLLSIYQFTRDNNCYFVFYSDCFYVKDVKTGKTLFR 362

Query: 123 GKSVNGLYPIPSSSTLSSARNELHPKNCALL-AKAGSYLWHHRLGHHSPKILRHALSTFD 182
           GKS +GLYP    + +S+       +  AL+  +    +WH RLGH +   L H +S  +
Sbjct: 363 GKSEHGLYPFRIHTQISTKSG----RPFALVGVRVSVPIWHSRLGHPTNNTLSHLIS--N 422

Query: 183 PTVLFKHLLTLNHAQPLRHYQPPSPSDHPVVVSSSSIAPNFYAVSVPPTHNMSFSSAPLP 242
             +L     + N   PL     P P    + ++S+         S PPT N    + P  
Sbjct: 423 KCLLMHETASPNFNSPLEIVTEPLPH---IPLASTGSPNTTIPPSDPPTQNP--PNVPTT 482

Query: 243 TAMTTASIIVTPAPVLLEAFSPHKDPTLSSFPIVSPSDPTCPSTSCSSVTDVRPINAHLM 302
           +   T +I++TP P++ E   P+  P  +  PI++ + P  P+T           N H M
Sbjct: 483 SITPTTNILITP-PIITEPTQPNTTPIPN--PIITETSP--PTT-----------NPHPM 524

Query: 303 QTWAKSGLS 311
            T +++G+S
Sbjct: 543 VTRSQAGIS 524

The following BLAST results are available for this feature:
BLAST of Moc07g04140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158189.15.3e-15871.30uncharacterized protein LOC111024722 [Momordica charantia][more]
KAA0067173.11.1e-3569.83retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon p... [more]
XP_016902697.11.2e-3264.86PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo][more]
KAA8528735.12.6e-3232.07hypothetical protein F0562_036090 [Nyssa sinensis][more]
KAA8524269.14.5e-3240.70hypothetical protein F0562_010692 [Nyssa sinensis][more]
BLAST of Moc07g04140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW29.1e-2035.91Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT943.8e-1835.09Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DYN62.6e-15871.30uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5A7VGG05.5e-3669.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4E3945.7e-3364.86uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=... [more]
A0A5J5ACM01.3e-3232.07Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_036090 PE=4 SV=1[more]
A0A2N9ILA51.3e-3233.66Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
BLAST of Moc07g04140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g04140.1Moc07g04140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0043167 ion binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016740 transferase activity