Moc06g17820 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g17820
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr6: 13930717 .. 13935939 (-)
RNA-Seq Expression	Moc06g17820
Synteny	Moc06g17820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGTCTGAATCCTAGGGGTGAGGAGGCAGCGGATCCAAATGTTCCCCCGGTAGTTCCTGGAGGGGTAGCACCCCCGGTCCCTCAGGCAGCTCCTCAGGGAGTTCCCTAAGTGAATCCCAGGTGGCGTTGCTAGCTAAGGCATTGCAAGTACTGCTGGATAATGCGAATTGAGACGGTGGAGCTCAAGTGCAGCAGCCTCGCCAGACACAAATTTCGTAAGATGAGGTTCAGTTTATCAGGGATTTCAAACGCTTTGGGCCACCCGTTTTCAACGGGGTGAGTGAGAGGCCTACTGCGGCCGAGGAATGGGTCAGGGAGTTGGAAGCCCTTTATGTGTATTTAGGATGCTCCGACGATTTCAAGGTCCGGGGAGCAGTATTTATGCTTTAGGGAAAAGCAGTAAATTAGAGGGAGTCGGTGGCGGCAGCGGAGGATCACGCCAACGTACCTGTCACGTGGGCAAGGTTTAAGGACCTACTTTATGAGAACTATTTCCCCGTGACCGTCAGGAATGAAAAACGGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCCAATACGAGAGGAAGTTCACTGAGCTGTCCCGTTTTGGAATGCAATATATTCCTACTGAGCAATTAAAGATTGACAAGTTCATTGACGGTTTGTGTAGGGAGATCAATGGGCTACTTGTTCTCAAGGAACCAACTACATATGCAGCGGCAGTCAGGTGTGCGTTGGTTATGGACAAATGTCTCGAGGAGCCTTAGTCTCAGCAGGTGATAGGCTCCAGCTCGGGGGTCAAGAGGAAATTTGCATCGTACTCCTCCAGTCAACCCTCAAGAGGACACCAGCATCATGTGCAAAGGCAGACTGCTCTTCCGGTGTGCCCCTCTTTTAAGAAGAGCCATGCTGGGCCATGTTGGTTGGGAAAAAGAATATGTTTCAAGTGCCAGAAGGAAGGACATTTCGCAAGGGAGTGTCCGATGACCGACTCGAATACCCAAGCATTAGGCCAGAAGACCCCTGCGACGGCGGCAGCTCAAGGTGGAACCCATAGGGCGCACGTCTTCGCTCTCACCAGGGGGGATGTTGAGCATGCCGAGGCGGTGGTCACAGGTACCTTCTCTTTGCGAGTTTTGAGTTGTGTGTTTATGCTTGTGTTTTATTGCATGCGTATTACTTTTGCAGGGACTGTTTTAGTGCTTAGTATGTCTGCTTACGCATTATTTGACTCTGGATCTAGTCATTTTTCATTGCTTCTACCTTTGTTCGACATGCGGACCTAGAGCTAGAATCGTTAGGTTTTTTGTTGTCGGTATCCACACCGTCAGGATCTGTGTTGGTCACTAGTCAAGTGGTGAAAGGAGGCCAGCTCTCTTTCGATGGTCAGACCTTGGAGGTAAAGTTAATTCAACTGGATATGCACGATTTCGATGTGATACTAGGCATGGATTGGTTACCTGTTAACCGGGCTAATATTAATTGCTCAAAGAAGGAAGTTAGTTTTCGCTTACCCTCCGGACAAAACTTTACCTTTAAGGGAGTTAAGGGCGGGGTTCCAAGGGTGGTGTCGGCATTGAAGGCCAGCCATCTTGTCCAACATGGTGCTTGGGCCTATTTGGCTAGCGTTGTGGATGCAAGGAAGGTTGTGCCAAGCATTGAGGCGATTCGTGTGGTTAATGAGTTCACTGACGTGTTCCCTGAGGACCTCCCCGGCTTGCCACCATTTCGCGAAGTGGACTTTTGTATAGAGTTGCTGCCGGGGACGGCTCCCATCTCGAAAGCACCTTATCGAATGGCTCCGGCAGAGTTGAAAGAGCTGAAGCTACAGTTGGAAGAATTACTCGACAAGGGTTTCATCCGCCCAAGCGTGTCCCCTTGGGGTGCGCCTGTGCTCTTTGTTAAGAAGAAGGACGGTTCTATGCGACTTTGCATAGACTACAGGGAACTAAACAAAGTTACGGTTAAGAATAAGTATCCCCTACCACGCATTGATGACCTTTTTGATCAGCTTCAGGGAGCGAAAGTGTTCTCGAAGATAGACTTACGTTCGGGGTACCACCAGTTAAGGTTAAAGGAGGCCGACATTCCAAAGACAGCGTTCAGAACAAGGTATGGGCACTATGAGTTTATCGTGATGTCTTTTGAACTCACAAATGCTCCGGCAGCCTTTATGGATCTAATGAACCGGGTCCTTAGGGATTATTTAGATTCATTTGTTATTGTGTTTATCGATGACATCCTGATATACTCCAAGACTGAGAAGTGTCAGAAGGAGCATCTCAGACAGGTTTTGACTACACTACGAGAAAATAAGTTGTATGCAAAGTTTTCAAAGTGAGAGTTCTGGCTGGACAAAGTGGCTTTCCTAGGTCACATAGTCACTAGGGATGGTATTGCAGTAGACCCCGCAAAGGTAGAGGCTGTTAGCAATTGGCCAAGGCCTAGTTCAGTTACAGAGATTCGTAGTTTCCTCGGCTTGGCTGGTTACTACAGGAAGTTCATCCAGAATTTCTCTCGGATAGCGGCACCGTTGACGCAGTTGACTCGTAAGAATGCTACCTTCACTTAGAGCAGCGAGTGTGAGGAGACTTTTCAGGAACTAAAGAAGCGTTTGGTGTCTGCACCGGTGTTAACTGTCCCCGATGGAACGGGAGGTTTGGTGGTTTACAGCGACGCCTCGCGAAAGGGCTTGGGATGTGTGCTGATGCAACATGGGAAGGTTAGAGCTTATGCTTCTCGACAGATGAAGGTGCATGAGCTTAACTACCCCACTCATGACCTAGAGCTAGCAGCAGTGGTGTTCGCCTTAAAGTTATGGAGGCACTACCTTTACGGAGAAAGAATTCAGGTCTTCACTGATCATCAGAGTTTGAAGTACCTATTACTCAAAAGAAGCTTAACTTAAGACAGAGACGGTGGCTAGAGTTGGTGAAGGACTATGATTGTGAGATTAGTTACCATCCGGGTAAGGCGAACGTTGTGGCCGATGCTCTTAGTAGAAAAGCGGCAAGTGTGGCATCTTTAGTAGTGGCCTGCAGTCCAATGCACAGCGAGTTGGAACGCTTGGAGGTGGAGCTGACAGTGGATGATGTCTCAGCGTTGTTGGCTCGACTCTCAGTGGGACCTAGCCTGAGACAGAGGATCATCGTTGCCCAAAAGGAAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTGGGCCATGGAGATTTCACTCTTTCGGGTGAGGCGGCCTTGCTTTTTCGCGGAAGGTTGTGTGTGCCAAAAGATTATTCTTTGAGGAAGAACTTACTGAGAGGGCACACAATGCTCCATACTCGGTTCATCCAGGAAGCACCAAAATGTATCAAGACCTCAAGAAACATTATTGGTGGCATAACATGAAGAGGGAAATAGCTCAGTTTGTTAGCAAGTGTTTGACCTGCCAGCAGGTAAAGGCTTCAAGACAAAGACCTGTTGGACTGCTATAACCTTTGAGCATACCAGTTTGGAAGTGGGACGATGTGGCTATGGACTTCATTACAGGACTACCAAGGACGGTTAAGGGATTTACTGTGATTTGGGTAGTTGTAGATCGTTTGACCAAGTCTACTTACTTTATTCCCGACAAGGCCATGTATACAGTAGAAAAATGGGCGGAACTGTATTTGCAGGAGATTGTCAGGCTACATGGTATACCGGTATCCATAGTGTCCGATCGCGACCCGCGTTTCACCTTGACTTTTCGGCGGAGTTTACACAAATCCCTTGGCACTAAGTTGGACTTTAGCACAGCATTTCACCCCCAAACTGATGGTCAGACGGAGCGCGTGAACCAGGTTTTAGAGGACATACTCAGAGCTTGCATGCTAGACTTTGGTGGTAGTTGGGACAAGTATCTCTACCTAATAGAGTTCGCTTATAATAACAGTTTGCAAGCCACGATTGCGATGGCTCCATACGAGGCACTTTATGGGAAGAAGTGTCGGTCTCCGGTTAATTGGGACGAAGTCGAAGAAAGAGTTCTCTTGGGACCGGATTTGGTAAAGACGACTAACAGTGCCATTCAAAAGATCAGGGGAAGCATGTAAATTGCTCAGAGCCGTCAAAAGAGTTATGCATACGTCAGACGTAGGGAGCTCGAGTTTGTGGTAGGTCAGCGGGTGTTTCGTGTGGCACCCCTGAAGGGAATTTTACGATTTGGGAAAAAGGGGAAGCTCAGTGCAAGGTTCATTGGGCCTTTTGAAATTTTGGAACTTATCGGCCTAGTCGCGTATAGGTTGGCTTTGCCACCATCGTTGGCAGGGTTCACAATGTGTTTCACGTGTCCATGCTGAGAAGGTACATGCATGACCCTTTGCACGTTTTGGATCTTGAACCATTACAACTAGATAAGTCCTTGTGCTACGAAGAGGTACCTGTAAAAATTTTGGCAAGAGAAACCAAGTTGTTAAGGAACCGGACGATTCGCTTGGTTAAGGTTTTGTGGAGAAACCGCCAATTGGAAGAGCCTACTTGGGAACGGGAGGACGATATCAAGGCGAGATACCCTGAACTGCTGGAAAAGTCAACTTTCGGGGACGAAAGTTTTTGGAGGGAAGTCTGTAACGCCCCGAGTCTCTCAGGTTAGTTAGTCTCGAATCAGGAGATTTTTATTTTAAAAATTAAACTCTAATTAAATTTATATTTATCGGGCTCTAAACTCTAATTAGATTTATAATTATCGGGCTCCGTGTGGTGGGTTTAGTTTAAAGATGGGATGGATTTCTTTTCTCTTGGGCTTGGTCATGTTGGGCCTTTATTAGGTTAATTTGGTTTTAAAACAAAGGAAAAGAGGAAAAAGAAAACAAAAAGGACTTCATCTTCTTCTTCTCTTTCTCCCTTGTTGCCCTAGCCATCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCGACCACACCTCACGGCGGCGACGGAAGCGGCGGCACCTCTTCGAAGCAGCAGAAGCGGCGGCCGGCGACCACCTCCGTAACAGCAGCAGCGACGGACGGCGACCCATCCAGCGGCAGCGTGACGTCGACCCGACGTCCCGGCGATCCACAGAAGCGGTGGCGCGATTTTCTCCGGCGACGCGTTCTCTGGCGAACGACCCAGATCTGCCATCACCGTTCCTGCAGCGTTCCTCGCGGCGGCGCACGACGAACAGATCAGATCCGCGGCAAACCTCGACGACCTGCTGCTACGATCTCATTCTCCAACGAACAGTAA

mRNA sequence

ATGAGGGGTCTGAATCCTAGGGGTGAGGAGGCAGCGGATCCAAATGTTCCCCCGGTAGTTCCTGGAGGGGTAGCACCCCCGGTCCCTCAGGCAGCTCCTCAGGGAACGGTGGAGCTCAAGTGCAGCAGCCTCGCCAGACACAAATTTCGTAAGATGAGGTTCAGTTTATCAGGGATTTCAAACGCTTTGGGCCACCCGTTTTCAACGGGGAATGAAAAACGGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCCAATACGAGAGGAAGTTCACTGAGCTGTCCCGTTTTGGAATGCAATATATTCCTACTGAGCAATTAAAGATTGACAAGTTCATTGACGGTTTGTGTAGGGAGATCAATGGGCTACTTGTTCTCAAGGAACCAACTACATATGCAGCGGCAGTCAGTCAACCCTCAAGAGGACACCAGCATCATGTGCAAAGGCAGACTGCTCTTCCGGTGTGCCCCTCTTTTAAGAAGAGCCATGCTGGGCCATGTTGGTTGGGAAAAAGAATATGTTTCAAGTGCCAGAAGGAAGGACATTTCGCAAGGGAGTGTCCGATGACCGACTCGAATACCCAAGCATTAGGCCAGAAGACCCCTGCGACGGCGGCAGCTCAAGGTGGAACCCATAGGGCGCACGTCTTCGCTCTCACCAGGGGGGATGTTGAGCATGCCGAGGCGGTGGTCACAGGGACTGTTTTAGTGCTTAGTATGTCTGCTTACGCATTATTTGACTCTGGATCTAGATCTGTGTTGGTCACTAGTCAAGTGGTGAAAGGAGGCCAGCTCTCTTTCGATGGTCAGACCTTGGAGGTAAAGTTAATTCAACTGGATATGCACGATTTCGATGTGATACTAGGCATGGATTGGTTACCTGTTAACCGGGCTAATATTAATTGCTCAAAGAAGGAAGTTAGTTTTCGCTTACCCTCCGGACAAAACTTTACCTTTAAGGGAGTTAAGGGCGGGGTTCCAAGGGTGGTGTCGGCATTGAAGGCCAGCCATCTTGTCCAACATGTAGTGGCCTGCAGTCCAATGCACAGCGAGTTGGAACGCTTGGAGGTGGAGCTGACAGTGGATGATGTCTCAGCGTTGTTGGCTCGACTCTCAGTGGGACCTAGCCTGAGACAGAGGATCATCGTTGCCCAAAAGGAAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTGGGCCATGGAGATTTCACTCTTTCGGATAAGTCCTTGTGCTACGAAGAGGTACCTGTAAAAATTTTGGCAAGAGAAACCAAGTTGTTAAGGAACCGGACGATTCGCTTGGTTAAGGTTTTGTGGAGAAACCGCCAATTGGAAGAGCCTACTTGGGAACGGGAGGACGATATCAAGGCGAGATACCCTGAACTGCTGGAAAAGTCAACTTTCGGGGACGAAAGTTTTTGGAGGGAAGTCTGTAACGCCCCGAGTCTCTCAGCCATCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCGACCACACCTCACGGCGGCGACGGAAGCGGCGGCACCTCTTCGAAGCAGCAGAAGCGGCGGCCGGCGACCACCTCCGTAACAGCAGCAGCGACGGACGGCGACCCATCCAGCGGCAGCGTGACGTCGACCCGACGTCCCGGCGATCCACAGAAGCGGTGGCGCGATTTTCTCCGGCGACGCGTTCTCTGGCGAACGACCCAGATCTGCCATCACCGTTCCTGCAGCGTTCCTCGCGGCGGCGCACGACGAACAGATCAGATCCGCGGCAAACCTCGACGACCTGCTGCTACGATCTCATTCTCCAACGAACAGTAA

Coding sequence (CDS)

ATGAGGGGTCTGAATCCTAGGGGTGAGGAGGCAGCGGATCCAAATGTTCCCCCGGTAGTTCCTGGAGGGGTAGCACCCCCGGTCCCTCAGGCAGCTCCTCAGGGAACGGTGGAGCTCAAGTGCAGCAGCCTCGCCAGACACAAATTTCGTAAGATGAGGTTCAGTTTATCAGGGATTTCAAACGCTTTGGGCCACCCGTTTTCAACGGGGAATGAAAAACGGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCCAATACGAGAGGAAGTTCACTGAGCTGTCCCGTTTTGGAATGCAATATATTCCTACTGAGCAATTAAAGATTGACAAGTTCATTGACGGTTTGTGTAGGGAGATCAATGGGCTACTTGTTCTCAAGGAACCAACTACATATGCAGCGGCAGTCAGTCAACCCTCAAGAGGACACCAGCATCATGTGCAAAGGCAGACTGCTCTTCCGGTGTGCCCCTCTTTTAAGAAGAGCCATGCTGGGCCATGTTGGTTGGGAAAAAGAATATGTTTCAAGTGCCAGAAGGAAGGACATTTCGCAAGGGAGTGTCCGATGACCGACTCGAATACCCAAGCATTAGGCCAGAAGACCCCTGCGACGGCGGCAGCTCAAGGTGGAACCCATAGGGCGCACGTCTTCGCTCTCACCAGGGGGGATGTTGAGCATGCCGAGGCGGTGGTCACAGGGACTGTTTTAGTGCTTAGTATGTCTGCTTACGCATTATTTGACTCTGGATCTAGATCTGTGTTGGTCACTAGTCAAGTGGTGAAAGGAGGCCAGCTCTCTTTCGATGGTCAGACCTTGGAGGTAAAGTTAATTCAACTGGATATGCACGATTTCGATGTGATACTAGGCATGGATTGGTTACCTGTTAACCGGGCTAATATTAATTGCTCAAAGAAGGAAGTTAGTTTTCGCTTACCCTCCGGACAAAACTTTACCTTTAAGGGAGTTAAGGGCGGGGTTCCAAGGGTGGTGTCGGCATTGAAGGCCAGCCATCTTGTCCAACATGTAGTGGCCTGCAGTCCAATGCACAGCGAGTTGGAACGCTTGGAGGTGGAGCTGACAGTGGATGATGTCTCAGCGTTGTTGGCTCGACTCTCAGTGGGACCTAGCCTGAGACAGAGGATCATCGTTGCCCAAAAGGAAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTGGGCCATGGAGATTTCACTCTTTCGGATAAGTCCTTGTGCTACGAAGAGGTACCTGTAAAAATTTTGGCAAGAGAAACCAAGTTGTTAAGGAACCGGACGATTCGCTTGGTTAAGGTTTTGTGGAGAAACCGCCAATTGGAAGAGCCTACTTGGGAACGGGAGGACGATATCAAGGCGAGATACCCTGAACTGCTGGAAAAGTCAACTTTCGGGGACGAAAGTTTTTGGAGGGAAGTCTGTAACGCCCCGAGTCTCTCAGCCATCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCGACCACACCTCACGGCGGCGACGGAAGCGGCGGCACCTCTTCGAAGCAGCAGAAGCGGCGGCCGGCGACCACCTCCGTAACAGCAGCAGCGACGGACGGCGACCCATCCAGCGGCAGCGTGACGTCGACCCGACGTCCCGGCGATCCACAGAAGCGGTGGCGCGATTTTCTCCGGCGACGCGTTCTCTGGCGAACGACCCAGATCTGCCATCACCGTTCCTGCAGCGTTCCTCGCGGCGGCGCACGACGAACAGATCAGATCCGCGGCAAACCTCGACGACCTGCTGCTACGATCTCATTCTCCAACGAACAGTAA

Protein sequence

MRGLNPRGEEAADPNVPPVVPGGVAPPVPQAAPQGTVELKCSSLARHKFRKMRFSLSGISNALGHPFSTGNEKRAEFLRLTQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAVSQPSRGHQHHVQRQTALPVCPSFKKSHAGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGDVEHAEAVVTGTVLVLSMSAYALFDSGSRSVLVTSQVVKGGQLSFDGQTLEVKLIQLDMHDFDVILGMDWLPVNRANINCSKKEVSFRLPSGQNFTFKGVKGGVPRVVSALKASHLVQHVVACSPMHSELERLEVELTVDDVSALLARLSVGPSLRQRIIVAQKEDPSLAKGFSMVGHGDFTLSDKSLCYEEVPVKILARETKLLRNRTIRLVKVLWRNRQLEEPTWEREDDIKARYPELLEKSTFGDESFWREVCNAPSLSAITHPSSSSCSPATTPHGGDGSGGTSSKQQKRRPATTSVTAAATDGDPSSGSVTSTRRPGDPQKRWRDFLRRRVLWRTTQICHHRSCSVPRGGARRTDQIRGKPRRPAATISFSNEQ

Homology

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BLAST of Moc06g17820 vs. NCBI nr
Match: XP_022158750.1 (uncharacterized protein LOC111025215 [Momordica charantia])

HSP 1 Score: 476.5 bits (1225), Expect = 3.5e-130
Identity = 285/490 (58.16%), Postives = 298/490 (60.82%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           NPRGE AADPNVPP VPGGVAPP PQAA QG                             
Sbjct: 16  NPRGEGAADPNVPPAVPGGVAPPCPQAASQGVPQVNPQVALLAEALQVLLDNANGAGGAQ 75

Query: 65  --------------------------------VELKCSSLARHKFRKMRFSLSG------ 124
                                           V L CS     K R   F L G      
Sbjct: 76  VQQPRWAQIPQEEVSERPTAAEEWVRELEALYVYLGCSD--DFKVRGAVFMLRGEAVNWW 135

Query: 125 --ISNALGH-------------------PFSTGNEKRAEFLRLTQGSLTVAQYERKFTEL 184
             ++ A  H                   P +  NEKR EFLRLTQGSLTVA+YERKFTEL
Sbjct: 136 ESVAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRVEFLRLTQGSLTVAEYERKFTEL 195

Query: 185 SRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV------------------ 244
           SRFGMQYIPT+QLKIDKFIDGL REI GLLVLKEPTTYAAAV                  
Sbjct: 196 SRFGMQYIPTKQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCALVMDKCLEEPQSQQV 255

Query: 245 ----------------SQPSRGHQHHVQRQTALPVCPSFKKSHAGPCWLGKRICFKCQKE 304
                           SQPSR HQHHVQRQTA PVCPS KKSHAGPCW+GKRIC++CQKE
Sbjct: 256 IGSSSGVKRKFASFSSSQPSRRHQHHVQRQTAPPVCPSCKKSHAGPCWVGKRICYRCQKE 315

Query: 305 GHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGDVEHAEAVVTGTVLVLSM 344
           GHFARECPMT SNTQALGQ+ PATAAAQGGTHRA VFALTRGDVE+AEAVVT TVLVLSM
Sbjct: 316 GHFARECPMTGSNTQALGQRIPATAAAQGGTHRARVFALTRGDVEYAEAVVTWTVLVLSM 375

[Close]

BLAST of Moc06g17820 vs. NCBI nr
Match: XP_022156992.1 (uncharacterized protein LOC111023821 [Momordica charantia])

HSP 1 Score: 468.8 bits (1205), Expect = 7.2e-128
Identity = 270/442 (61.09%), Postives = 282/442 (63.80%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGTVELKCSSLARHKFRKMRFSLSGIS---- 64
           NPRGE AADPNVP  VPGGVAP VPQAAPQG  +         + R+ +F    +     
Sbjct: 70  NPRGEGAADPNVPSAVPGGVAPLVPQAAPQGVPQNGAGGAQVQQPRRAQFPQEEVQFIRD 129

Query: 65  -NALGHPFSTG----------------------------------NEKRAEFLRLTQGSL 124
               G P   G                                  NEKRAEFLRLTQGSL
Sbjct: 130 FKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKVQGAVNEKRAEFLRLTQGSL 189

Query: 125 TVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV------ 184
           TVAQYERKFTELSRF MQYIP EQLKIDKFIDGL REI GLLVLKEPTTYAAAV      
Sbjct: 190 TVAQYERKFTELSRFRMQYIPIEQLKIDKFIDGLHREIKGLLVLKEPTTYAAAVRCALVM 249

Query: 185 ----------------------------SQPSRGHQHHVQRQTALPVCPSFKKSHAGPCW 244
                                       SQPSRGHQHHVQRQTA PVCPS KKSH GPCW
Sbjct: 250 DKCLEEPQSQQVMGSSSGVKRKFASFSSSQPSRGHQHHVQRQTAPPVCPSCKKSHVGPCW 309

Query: 245 LGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGDVEHAE 304
           LGK IC++CQKEGHFARECPMT  NTQ LGQ+ P T AAQGGTHRA VFALTRGDV HAE
Sbjct: 310 LGKIICYRCQKEGHFARECPMTGPNTQGLGQRIPVTTAAQGGTHRARVFALTRGDVAHAE 369

Query: 305 AVVTGTVLVLSMSAYALFDSGSR------------------------------SVLVTSQ 344
           AVV GTVLVLSM AYALFDS S                               SVLVTSQ
Sbjct: 370 AVVLGTVLVLSMPAYALFDSRSSHSFIASTFVRHADLELESLGFLLSVSTPSGSVLVTSQ 429

[Close]

BLAST of Moc06g17820 vs. NCBI nr
Match: XP_022156067.1 (uncharacterized protein LOC111023035 [Momordica charantia])

HSP 1 Score: 449.9 bits (1156), Expect = 3.5e-122
Identity = 254/407 (62.41%), Postives = 266/407 (65.36%), Query Frame = 0


Query: 66  PFSTGNEKRAEFLRLTQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREING 125
           P +  NEKRAEFLRLTQGSLTVAQY+RKFTELSRFGMQYIPTEQLKIDKFIDGL REI G
Sbjct: 39  PVTVRNEKRAEFLRLTQGSLTVAQYKRKFTELSRFGMQYIPTEQLKIDKFIDGLRREIKG 98

Query: 126 LLVLKEPTTYAAAV----------------------------------SQPSRGHQHHVQ 185
           LL+LKE TTYAAAV                                  SQ S GHQH+VQ
Sbjct: 99  LLILKESTTYAAAVRCALVMDKCLEEPQSQQVMGSSSGVKRKFASFSSSQSSIGHQHYVQ 158

Query: 186 RQTALPVCPSFKKSHAGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQ 245
           RQTA P CPS KK+HAGPCWLGKRICF+CQKEGHFARECPMT SNTQALGQKTP  AAAQ
Sbjct: 159 RQTAPPGCPSCKKNHAGPCWLGKRICFRCQKEGHFARECPMTGSNTQALGQKTPTAAAAQ 218

Query: 246 GGTHRAHVFALTRGDVEHAEAVVTGTVLVLSMSAYALFDSGSR----------------- 305
           GGT RA VFALTRGDVEHAEAVVTGT+LVLSM AYALFDSGS                  
Sbjct: 219 GGTQRARVFALTRGDVEHAEAVVTGTILVLSMPAYALFDSGSSHSFIASTFVQHADLELE 278

Query: 306 -------------SVLVTSQVVKGGQLSFDGQTLEVKLIQLDMHDFDVILGMDWLPVNRA 362
                        SVLVTSQVVKGGQLSFDGQTLEVKLIQLDM DFDVILGMDWL  N A
Sbjct: 279 SLGFLLSVSTPSGSVLVTSQVVKGGQLSFDGQTLEVKLIQLDMQDFDVILGMDWLAANEA 338

[Close]

BLAST of Moc06g17820 vs. NCBI nr
Match: XP_022156328.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia])

HSP 1 Score: 440.3 bits (1131), Expect = 2.7e-119
Identity = 274/510 (53.73%), Postives = 285/510 (55.88%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           N RGE AADPNV PVVPGGV PPVPQAAPQG                             
Sbjct: 16  NLRGENAADPNVSPVVPGGVVPPVPQAAPQGVPQVNPQVALLAEALQVLLHNANGAGGAQ 75

Query: 65  -------------------------------------------------VELKCSSLARH 124
                                                            V L CS     
Sbjct: 76  VQQPRRAQIPQDEVQFIRDFKCFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSD--DF 135

Query: 125 KFRKMRFSLSG--------ISNALGH-------------------PFSTGNEKRAEFLRL 184
           K R   F L G        ++ A  H                   P    NEKR EFLRL
Sbjct: 136 KVRGAVFMLRGEAVNWWESVAAAEDHANVPVTWARFKDLLYEYYFPVIARNEKRVEFLRL 195

Query: 185 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV- 244
           TQGSLTVAQYERKFTELSRFG QY+PTEQLKIDKFIDGL REI GLLVLKEPTTYAAAV 
Sbjct: 196 TQGSLTVAQYERKFTELSRFGTQYVPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVR 255

Query: 245 ---------------------------------SQPSRGHQHHVQRQTALPVCPSFKKSH 304
                                            SQ SRGHQHH QRQTA PVCPS KK+H
Sbjct: 256 CALVMDKCLEEPQSQQVIGSNSGVKRKFASFSASQSSRGHQHHAQRQTAPPVCPSCKKNH 315

Query: 305 AGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGD 347
           A PCWLGK+ICFKCQKEGHF REC MT SNTQAL QKTP   A QGGT  A VFALTRGD
Sbjct: 316 ARPCWLGKKICFKCQKEGHFTRECLMTGSNTQALSQKTPTATATQGGTQMARVFALTRGD 375

[Close]

BLAST of Moc06g17820 vs. NCBI nr
Match: XP_022156328.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia])

HSP 1 Score: 117.5 bits (293), Expect = 4.1e-22
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 337  KASHLVQHVVACSPMHSELERLEVELTVDDVSALLARLSVGPSLRQRIIVAQKEDPSLAK 396
            KA+ +   V ACS MHSELE  EVELTVDDVSALLARLSV PSLRQRIIVAQKEDPSLAK
Sbjct: 989  KAASVASLVAACSQMHSELECSEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAK 1048

Query: 397  GFSMVGHGDFTLSDKS 413
            GFSMVGHGDFTLS ++
Sbjct: 1049 GFSMVGHGDFTLSGEA 1064

HSP 2 Score: 413.3 bits (1061), Expect = 3.6e-111
Identity = 264/507 (52.07%), Postives = 277/507 (54.64%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           NPRGE AADPNVP +VPG VAPPVPQAAPQG                             
Sbjct: 16  NPRGEGAADPNVPLIVPGRVAPPVPQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQ 75

Query: 65  -------------------------------------------------VELKCSSLARH 124
                                                            V L CS     
Sbjct: 76  VQQPRRAQIPQDEVQFIRDFKRFGPPVFNGVSERPTATEEWVRELEALYVYLGCSD--DF 135

Query: 125 KFRKMRFSLSG--------ISNALGH-------------------PFSTGNEKRAEFLRL 184
           K R   F L G        ++ A  H                   P +  NEKRAEFLRL
Sbjct: 136 KVRGAVFMLRGEAVNWWESVAAAEDHTNVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRL 195

Query: 185 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV- 244
           TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGL  EI GLLV+KEPTTYAAA+ 
Sbjct: 196 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLRMEIKGLLVVKEPTTYAAAIR 255

Query: 245 ---------------------------------SQPSRGHQHHVQRQTALPVCPSFKKSH 304
                                            SQ SRGHQHHVQRQTA PVCPS KK+H
Sbjct: 256 CALVMDKCLEEPQSQQVMGSSSGVKRKFALFSSSQSSRGHQHHVQRQTAPPVCPSCKKNH 315

Query: 305 AGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGD 344
           AGPCWLGKRICF+C                     QKTPA AAAQGGT RA VFALTRGD
Sbjct: 316 AGPCWLGKRICFRC---------------------QKTPAAAAAQGGTQRARVFALTRGD 375

[Close]

BLAST of Moc06g17820 vs. ExPASy TrEMBL
Match: A0A6J1DWP4 (uncharacterized protein LOC111025215 OS=Momordica charantia OX=3673 GN=LOC111025215 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 1.7e-130
Identity = 285/490 (58.16%), Postives = 298/490 (60.82%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           NPRGE AADPNVPP VPGGVAPP PQAA QG                             
Sbjct: 16  NPRGEGAADPNVPPAVPGGVAPPCPQAASQGVPQVNPQVALLAEALQVLLDNANGAGGAQ 75

Query: 65  --------------------------------VELKCSSLARHKFRKMRFSLSG------ 124
                                           V L CS     K R   F L G      
Sbjct: 76  VQQPRWAQIPQEEVSERPTAAEEWVRELEALYVYLGCSD--DFKVRGAVFMLRGEAVNWW 135

Query: 125 --ISNALGH-------------------PFSTGNEKRAEFLRLTQGSLTVAQYERKFTEL 184
             ++ A  H                   P +  NEKR EFLRLTQGSLTVA+YERKFTEL
Sbjct: 136 ESVAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRVEFLRLTQGSLTVAEYERKFTEL 195

Query: 185 SRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV------------------ 244
           SRFGMQYIPT+QLKIDKFIDGL REI GLLVLKEPTTYAAAV                  
Sbjct: 196 SRFGMQYIPTKQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCALVMDKCLEEPQSQQV 255

Query: 245 ----------------SQPSRGHQHHVQRQTALPVCPSFKKSHAGPCWLGKRICFKCQKE 304
                           SQPSR HQHHVQRQTA PVCPS KKSHAGPCW+GKRIC++CQKE
Sbjct: 256 IGSSSGVKRKFASFSSSQPSRRHQHHVQRQTAPPVCPSCKKSHAGPCWVGKRICYRCQKE 315

Query: 305 GHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGDVEHAEAVVTGTVLVLSM 344
           GHFARECPMT SNTQALGQ+ PATAAAQGGTHRA VFALTRGDVE+AEAVVT TVLVLSM
Sbjct: 316 GHFARECPMTGSNTQALGQRIPATAAAQGGTHRARVFALTRGDVEYAEAVVTWTVLVLSM 375

[Close]

BLAST of Moc06g17820 vs. ExPASy TrEMBL
Match: A0A6J1DTE5 (uncharacterized protein LOC111023821 OS=Momordica charantia OX=3673 GN=LOC111023821 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 3.5e-128
Identity = 270/442 (61.09%), Postives = 282/442 (63.80%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGTVELKCSSLARHKFRKMRFSLSGIS---- 64
           NPRGE AADPNVP  VPGGVAP VPQAAPQG  +         + R+ +F    +     
Sbjct: 70  NPRGEGAADPNVPSAVPGGVAPLVPQAAPQGVPQNGAGGAQVQQPRRAQFPQEEVQFIRD 129

Query: 65  -NALGHPFSTG----------------------------------NEKRAEFLRLTQGSL 124
               G P   G                                  NEKRAEFLRLTQGSL
Sbjct: 130 FKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKVQGAVNEKRAEFLRLTQGSL 189

Query: 125 TVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV------ 184
           TVAQYERKFTELSRF MQYIP EQLKIDKFIDGL REI GLLVLKEPTTYAAAV      
Sbjct: 190 TVAQYERKFTELSRFRMQYIPIEQLKIDKFIDGLHREIKGLLVLKEPTTYAAAVRCALVM 249

Query: 185 ----------------------------SQPSRGHQHHVQRQTALPVCPSFKKSHAGPCW 244
                                       SQPSRGHQHHVQRQTA PVCPS KKSH GPCW
Sbjct: 250 DKCLEEPQSQQVMGSSSGVKRKFASFSSSQPSRGHQHHVQRQTAPPVCPSCKKSHVGPCW 309

Query: 245 LGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGDVEHAE 304
           LGK IC++CQKEGHFARECPMT  NTQ LGQ+ P T AAQGGTHRA VFALTRGDV HAE
Sbjct: 310 LGKIICYRCQKEGHFARECPMTGPNTQGLGQRIPVTTAAQGGTHRARVFALTRGDVAHAE 369

Query: 305 AVVTGTVLVLSMSAYALFDSGSR------------------------------SVLVTSQ 344
           AVV GTVLVLSM AYALFDS S                               SVLVTSQ
Sbjct: 370 AVVLGTVLVLSMPAYALFDSRSSHSFIASTFVRHADLELESLGFLLSVSTPSGSVLVTSQ 429

[Close]

BLAST of Moc06g17820 vs. ExPASy TrEMBL
Match: A0A6J1DR22 (uncharacterized protein LOC111023035 OS=Momordica charantia OX=3673 GN=LOC111023035 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-122
Identity = 254/407 (62.41%), Postives = 266/407 (65.36%), Query Frame = 0


Query: 66  PFSTGNEKRAEFLRLTQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREING 125
           P +  NEKRAEFLRLTQGSLTVAQY+RKFTELSRFGMQYIPTEQLKIDKFIDGL REI G
Sbjct: 39  PVTVRNEKRAEFLRLTQGSLTVAQYKRKFTELSRFGMQYIPTEQLKIDKFIDGLRREIKG 98

Query: 126 LLVLKEPTTYAAAV----------------------------------SQPSRGHQHHVQ 185
           LL+LKE TTYAAAV                                  SQ S GHQH+VQ
Sbjct: 99  LLILKESTTYAAAVRCALVMDKCLEEPQSQQVMGSSSGVKRKFASFSSSQSSIGHQHYVQ 158

Query: 186 RQTALPVCPSFKKSHAGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQ 245
           RQTA P CPS KK+HAGPCWLGKRICF+CQKEGHFARECPMT SNTQALGQKTP  AAAQ
Sbjct: 159 RQTAPPGCPSCKKNHAGPCWLGKRICFRCQKEGHFARECPMTGSNTQALGQKTPTAAAAQ 218

Query: 246 GGTHRAHVFALTRGDVEHAEAVVTGTVLVLSMSAYALFDSGSR----------------- 305
           GGT RA VFALTRGDVEHAEAVVTGT+LVLSM AYALFDSGS                  
Sbjct: 219 GGTQRARVFALTRGDVEHAEAVVTGTILVLSMPAYALFDSGSSHSFIASTFVQHADLELE 278

Query: 306 -------------SVLVTSQVVKGGQLSFDGQTLEVKLIQLDMHDFDVILGMDWLPVNRA 362
                        SVLVTSQVVKGGQLSFDGQTLEVKLIQLDM DFDVILGMDWL  N A
Sbjct: 279 SLGFLLSVSTPSGSVLVTSQVVKGGQLSFDGQTLEVKLIQLDMQDFDVILGMDWLAANEA 338

[Close]

BLAST of Moc06g17820 vs. ExPASy TrEMBL
Match: A0A6J1DQB9 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111023249 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119
Identity = 274/510 (53.73%), Postives = 285/510 (55.88%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           N RGE AADPNV PVVPGGV PPVPQAAPQG                             
Sbjct: 16  NLRGENAADPNVSPVVPGGVVPPVPQAAPQGVPQVNPQVALLAEALQVLLHNANGAGGAQ 75

Query: 65  -------------------------------------------------VELKCSSLARH 124
                                                            V L CS     
Sbjct: 76  VQQPRRAQIPQDEVQFIRDFKCFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSD--DF 135

Query: 125 KFRKMRFSLSG--------ISNALGH-------------------PFSTGNEKRAEFLRL 184
           K R   F L G        ++ A  H                   P    NEKR EFLRL
Sbjct: 136 KVRGAVFMLRGEAVNWWESVAAAEDHANVPVTWARFKDLLYEYYFPVIARNEKRVEFLRL 195

Query: 185 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV- 244
           TQGSLTVAQYERKFTELSRFG QY+PTEQLKIDKFIDGL REI GLLVLKEPTTYAAAV 
Sbjct: 196 TQGSLTVAQYERKFTELSRFGTQYVPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVR 255

Query: 245 ---------------------------------SQPSRGHQHHVQRQTALPVCPSFKKSH 304
                                            SQ SRGHQHH QRQTA PVCPS KK+H
Sbjct: 256 CALVMDKCLEEPQSQQVIGSNSGVKRKFASFSASQSSRGHQHHAQRQTAPPVCPSCKKNH 315

Query: 305 AGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGD 347
           A PCWLGK+ICFKCQKEGHF REC MT SNTQAL QKTP   A QGGT  A VFALTRGD
Sbjct: 316 ARPCWLGKKICFKCQKEGHFTRECLMTGSNTQALSQKTPTATATQGGTQMARVFALTRGD 375

[Close]

BLAST of Moc06g17820 vs. ExPASy TrEMBL
Match: A0A6J1DQB9 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111023249 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-22
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 337  KASHLVQHVVACSPMHSELERLEVELTVDDVSALLARLSVGPSLRQRIIVAQKEDPSLAK 396
            KA+ +   V ACS MHSELE  EVELTVDDVSALLARLSV PSLRQRIIVAQKEDPSLAK
Sbjct: 989  KAASVASLVAACSQMHSELECSEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAK 1048

Query: 397  GFSMVGHGDFTLSDKS 413
            GFSMVGHGDFTLS ++
Sbjct: 1049 GFSMVGHGDFTLSGEA 1064

HSP 2 Score: 413.3 bits (1061), Expect = 1.7e-111
Identity = 264/507 (52.07%), Postives = 277/507 (54.64%), Query Frame = 0


Query: 5   NPRGEEAADPNVPPVVPGGVAPPVPQAAPQGT---------------------------- 64
           NPRGE AADPNVP +VPG VAPPVPQAAPQG                             
Sbjct: 16  NPRGEGAADPNVPLIVPGRVAPPVPQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQ 75

Query: 65  -------------------------------------------------VELKCSSLARH 124
                                                            V L CS     
Sbjct: 76  VQQPRRAQIPQDEVQFIRDFKRFGPPVFNGVSERPTATEEWVRELEALYVYLGCSD--DF 135

Query: 125 KFRKMRFSLSG--------ISNALGH-------------------PFSTGNEKRAEFLRL 184
           K R   F L G        ++ A  H                   P +  NEKRAEFLRL
Sbjct: 136 KVRGAVFMLRGEAVNWWESVAAAEDHTNVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRL 195

Query: 185 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLCREINGLLVLKEPTTYAAAV- 244
           TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGL  EI GLLV+KEPTTYAAA+ 
Sbjct: 196 TQGSLTVAQYERKFTELSRFGMQYIPTEQLKIDKFIDGLRMEIKGLLVVKEPTTYAAAIR 255

Query: 245 ---------------------------------SQPSRGHQHHVQRQTALPVCPSFKKSH 304
                                            SQ SRGHQHHVQRQTA PVCPS KK+H
Sbjct: 256 CALVMDKCLEEPQSQQVMGSSSGVKRKFALFSSSQSSRGHQHHVQRQTAPPVCPSCKKNH 315

Query: 305 AGPCWLGKRICFKCQKEGHFARECPMTDSNTQALGQKTPATAAAQGGTHRAHVFALTRGD 344
           AGPCWLGKRICF+C                     QKTPA AAAQGGT RA VFALTRGD
Sbjct: 316 AGPCWLGKRICFRC---------------------QKTPAAAAAQGGTQRARVFALTRGD 375

The following BLAST results are available for this feature:

BLAST of Moc06g17820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158750.1	3.5e-130	58.16	uncharacterized protein LOC111025215 [Momordica charantia]	[more]
XP_022156992.1	7.2e-128	61.09	uncharacterized protein LOC111023821 [Momordica charantia]	[more]
XP_022156067.1	3.5e-122	62.41	uncharacterized protein LOC111023035 [Momordica charantia]	[more]
XP_022156328.1	2.7e-119	53.73	LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]	[more]
XP_022156328.1	4.1e-22	81.58	LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]	[more]

BLAST of Moc06g17820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g17820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWP4	1.7e-130	58.16	uncharacterized protein LOC111025215 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DTE5	3.5e-128	61.09	uncharacterized protein LOC111023821 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DR22	1.7e-122	62.41	uncharacterized protein LOC111023035 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DQB9	1.3e-119	53.73	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111023249 PE=4 SV=1	[more]
A0A6J1DQB9	2.0e-22	81.58	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111023249 PE=4 SV=1	[more]

BLAST of Moc06g17820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 176..192 e-value: 3.9E-5 score: 33.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 176..191 e-value: 6.2E-7 score: 29.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 177..191 score: 10.476859
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 249..321 e-value: 1.6E-8 score: 36.2
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 66..119 e-value: 2.2E-5 score: 24.7
None	No IPR available	GENE3D	4.10.60.10		coord: 173..214 e-value: 2.5E-7 score: 32.9
None	No IPR available	PFAM	PF08284	RVP_2	coord: 257..313 e-value: 3.6E-13 score: 49.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..553
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 394..460
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 394..460
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 274..330
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 274..330
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 168..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g17820.1	Moc06g17820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0008270	zinc ion binding