Moc06g16550 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g16550
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Locationchr6: 13022067 .. 13022669 (-)
RNA-Seq ExpressionMoc06g16550
SyntenyMoc06g16550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCTACGAGAATGGAGTCTCGAGTTGAAGCAGTGGAACAACAAATTTCCGGGGTGGTTTCGGCCATAGAAGATAGTAGGGAATCGTGGAAGAAGGAAATGGCATTGTTTAAGGATGAGATGCGTCTGTGGATGACAGCGGTATCACAGAGGATGGGAATGGAAGAGAAGACTAGGGACGACAAAGGGAAAGGGCTGGAGAAAATCGATGTGGGGGAGAAGACGCCTCAGAGTATTGCGACTTCAAGTGATGGGTCGAATCAACTCACGAACGCGCTAGCCCCGGTATTCGATCTCCGTTTACGCAAGTTGGAGGTACCTATTTTTGAGGGGGAAAATCCCGATGCGTGGCTACACCGTGTGGCCCGATATTTTCGGATTAATCGATTGACGGATGACGAGAAATTAGAGGCGGCGGTGCTCTGTTTGGACGGTGAGGCTTTGGCTTGGCATCAGTGGGAGGAGAGGAAGAATCCGATACAGACTTGGGAGGAGTTCCGGCTATTGTTATTGCAGCGTTTCCGACCAACCTTGGAAGGGACTCTGTGCGACCGATTCATGGCAGTGAAGCAGGAGACGACGGTGAGGGATTACCGCTGA

mRNA sequence

ATGGTCGCTACGAGAATGGAGTCTCGAGTTGAAGCAGTGGAACAACAAATTTCCGGGGTGGTTTCGGCCATAGAAGATAGTAGGGAATCGTGGAAGAAGGAAATGGCATTGTTTAAGGATGAGATGCGTCTGTGGATGACAGCGGTATCACAGAGGATGGGAATGGAAGAGAAGACTAGGGACGACAAAGGGAAAGGGCTGGAGAAAATCGATGTGGGGGAGAAGACGCCTCAGAGTATTGCGACTTCAAGTGATGGGTCGAATCAACTCACGAACGCGCTAGCCCCGGTATTCGATCTCCGTTTACGCAAGTTGGAGGTACCTATTTTTGAGGGGGAAAATCCCGATGCGTGGCTACACCGTGTGGCCCGATATTTTCGGATTAATCGATTGACGGATGACGAGAAATTAGAGGCGGCGGTGCTCTGTTTGGACGGTGAGGCTTTGGCTTGGCATCAGTGGGAGGAGAGGAAGAATCCGATACAGACTTGGGAGGAGTTCCGGCTATTGTTATTGCAGCGTTTCCGACCAACCTTGGAAGGGACTCTGTGCGACCGATTCATGGCAGTGAAGCAGGAGACGACGGTGAGGGATTACCGCTGA

Coding sequence (CDS)

ATGGTCGCTACGAGAATGGAGTCTCGAGTTGAAGCAGTGGAACAACAAATTTCCGGGGTGGTTTCGGCCATAGAAGATAGTAGGGAATCGTGGAAGAAGGAAATGGCATTGTTTAAGGATGAGATGCGTCTGTGGATGACAGCGGTATCACAGAGGATGGGAATGGAAGAGAAGACTAGGGACGACAAAGGGAAAGGGCTGGAGAAAATCGATGTGGGGGAGAAGACGCCTCAGAGTATTGCGACTTCAAGTGATGGGTCGAATCAACTCACGAACGCGCTAGCCCCGGTATTCGATCTCCGTTTACGCAAGTTGGAGGTACCTATTTTTGAGGGGGAAAATCCCGATGCGTGGCTACACCGTGTGGCCCGATATTTTCGGATTAATCGATTGACGGATGACGAGAAATTAGAGGCGGCGGTGCTCTGTTTGGACGGTGAGGCTTTGGCTTGGCATCAGTGGGAGGAGAGGAAGAATCCGATACAGACTTGGGAGGAGTTCCGGCTATTGTTATTGCAGCGTTTCCGACCAACCTTGGAAGGGACTCTGTGCGACCGATTCATGGCAGTGAAGCAGGAGACGACGGTGAGGGATTACCGCTGA

Protein sequence

MVATRMESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDEMRLWMTAVSQRMGMEEKTRDDKGKGLEKIDVGEKTPQSIATSSDGSNQLTNALAPVFDLRLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR
Homology
BLAST of Moc06g16550 vs. NCBI nr
Match: XP_022897442.1 (uncharacterized protein LOC111411108 [Olea europaea var. sylvestris])

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-33
Identity = 79/198 (39.90%), Postives = 118/198 (59.60%), Query Frame = 0

Query: 6   MESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDEMRLWMTAVSQRMGMEEKTRDDKGK 65
           +  RV  +EQ++      ++    S + E  L    M      + ++   +EK R +KG 
Sbjct: 50  LTDRVGELEQRVENHYQELQAGLGSLQSEFRLMHAGMTERFEILMRKWDTQEKERKEKGI 109

Query: 66  GLEKIDVGEKTPQSIATSSDGSNQLTNALAPV---FDLRLRKLEVPIFEGENPDAWLHRV 125
             EK          +  S   SNQ     A      + R+R+LE+P+FEG +PD W+ RV
Sbjct: 110 TSEKSPT-LSAESGLTQSRPSSNQCVGGSAGSEWRGEPRIRRLEMPVFEGNDPDGWVFRV 169

Query: 126 ARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWEEFRLLLLQRFRPTLEGT 185
            RYF +NRL+++EKLEAA +C DGEALAW QWEER+ P++ WE+ +  LL+RFRP+ EG+
Sbjct: 170 ERYFSVNRLSEEEKLEAAAVCFDGEALAWFQWEERRRPVKAWEDLKAHLLRRFRPSQEGS 229

Query: 186 LCDRFMAVKQETTVRDYR 201
           LC +F++++Q TTVR+YR
Sbjct: 230 LCAQFLSLQQTTTVREYR 246

BLAST of Moc06g16550 vs. NCBI nr
Match: EXB38291.1 (hypothetical protein L484_013924 [Morus notabilis])

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-29
Identity = 56/102 (54.90%), Postives = 84/102 (82.35%), Query Frame = 0

Query: 99  DLRLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERK 158
           +L  R++E+P+F+GENPD W  R  RYF +N++T+ EKL+ AV+ L+GEALAW QWE+ +
Sbjct: 861 ELCTRRVEMPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQWEDGR 920

Query: 159 NPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR 201
           +PI++W   +L+LL+RFRP  EG+LC++F++++QETTVRDYR
Sbjct: 921 SPIRSWMVLKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYR 962

BLAST of Moc06g16550 vs. NCBI nr
Match: TXG60193.1 (hypothetical protein EZV62_014766 [Acer yangbiense])

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 72/204 (35.29%), Postives = 115/204 (56.37%), Query Frame = 0

Query: 1   MVATRMESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDEMRLWMTAVSQRMGMEEK-- 60
           M    M+SR++ +E+ +  V       RE  ++E+   KDE+          + M+E+  
Sbjct: 1   MTNKNMQSRMDTMEEVVVTV-------REDLQREVGTIKDEIMAMNKRFDHLLQMQEEAA 60

Query: 61  --TRDDKGKGLEKIDVGEKTPQSIATSSDGSNQLTNALAPVFDLRLRKLEVPIFEGENPD 120
                  GKG E               + GS   +N      D R RKLE+P+F+G NPD
Sbjct: 61  RVAASSSGKGKESTSRVPTVGGPAIGVTHGSEGTSNVFEHRRDFRFRKLEMPVFDGTNPD 120

Query: 121 AWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWEEFRLLLLQRFR 180
            W+ +  RYF + R  ++EKLEA+V+  +G+AL W+QWE +K P+  WEE +LL+L++FR
Sbjct: 121 GWILKAERYFSLQRFNNEEKLEASVIGFEGDALLWYQWEHKKRPMFLWEEMKLLILKQFR 180

Query: 181 PTLEGTLCDRFMAVKQETTVRDYR 201
            T EG+L ++F+A++Q+ TV++YR
Sbjct: 181 STQEGSLHEQFLALRQQGTVKEYR 197

BLAST of Moc06g16550 vs. NCBI nr
Match: XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida])

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 82/223 (36.77%), Postives = 121/223 (54.26%), Query Frame = 0

Query: 5   RMESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDEMRLWM-----TAVSQRM------ 64
           +ME+R+ AVE+Q++ +   +E+  +   +EM    + M +         + Q+M      
Sbjct: 4   KMEARLSAVEEQLTLLQVGMENRMDQRFREMQQITESMMIAKIEALGETLEQKMIRPLEV 63

Query: 65  -------------GMEEKTRDDKGKGLEKIDVGEKTPQSIATSSDGSNQLTNALAPVFDL 124
                        G  EKT  D+GK   + DVGE+                     +FD+
Sbjct: 64  WSKKLEILKEGESGSSEKTVMDRGKQPAREDVGERRE-----------------VLLFDM 123

Query: 125 RLRKLEVPIFE---GENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEER 184
           RLRKLE+PIF+   GE+P  W HRV RYF +NRL++ +K+EAA+LCL+GEAL WHQWEE 
Sbjct: 124 RLRKLEIPIFKGEIGEDPMGWFHRVERYFVVNRLSEKDKIEAAILCLEGEALEWHQWEEE 183

Query: 185 KNPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR 201
           + P+ TW +F+  LL RF P  E     +F+ +KQ+ +VR YR
Sbjct: 184 RTPMNTWAKFKAHLLLRFLPIKEEDRRAQFLTLKQDGSVRAYR 209

BLAST of Moc06g16550 vs. NCBI nr
Match: XP_024017591.1 (uncharacterized protein LOC112090471 [Morus notabilis])

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-27
Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 0

Query: 14  EQQISGVVSAIEDSRESWKKEMALFKDEMRLWMTAVSQRMGME--EKTRDDKGKGLEKID 73
           E+ +  V S  ED  +  + E  L  + + + M  +S++ G E  E    D G   E+  
Sbjct: 18  EELLKEVESMREDLGKIPRLEQGL--ELLLIRMDELSKQRGPENRESPETDNGIPAEQTA 77

Query: 74  VGEKTPQSIATSSDGSNQLTNALAPVFDLRLRKLEVPIFEGENPDAWLHRVARYFRINRL 133
              +T    A   +G +          + R R++E+P+F+GENPD W+ R  RYF +NRL
Sbjct: 78  PTTETDYRPAEWREGGS--------CTEFRTRRVEMPVFDGENPDGWIFRAERYFSLNRL 137

Query: 134 TDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVK 193
           TD EKL+ AV+ L+GEALAW QWE+R+  ++ W E +  +L+RF  T EGTLC++F+++ 
Sbjct: 138 TDREKLDVAVVSLEGEALAWFQWEDRRWAVRDWTELKRKVLERFHSTQEGTLCEKFLSLH 196

Query: 194 QETTVRDYR 201
           QETTVR+YR
Sbjct: 198 QETTVREYR 196

BLAST of Moc06g16550 vs. ExPASy TrEMBL
Match: W9QTX5 (Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981085 GN=L484_013924 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 56/102 (54.90%), Postives = 84/102 (82.35%), Query Frame = 0

Query: 99  DLRLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERK 158
           +L  R++E+P+F+GENPD W  R  RYF +N++T+ EKL+ AV+ L+GEALAW QWE+ +
Sbjct: 861 ELCTRRVEMPVFDGENPDGWSIRAERYFAMNKMTEREKLDVAVVSLEGEALAWFQWEDGR 920

Query: 159 NPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR 201
           +PI++W   +L+LL+RFRP  EG+LC++F++++QETTVRDYR
Sbjct: 921 SPIRSWMVLKLMLLERFRPMQEGSLCEKFLSLRQETTVRDYR 962

BLAST of Moc06g16550 vs. ExPASy TrEMBL
Match: A0A5C7HSW3 (Chromo domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014766 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.1e-29
Identity = 72/204 (35.29%), Postives = 115/204 (56.37%), Query Frame = 0

Query: 1   MVATRMESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDEMRLWMTAVSQRMGMEEK-- 60
           M    M+SR++ +E+ +  V       RE  ++E+   KDE+          + M+E+  
Sbjct: 1   MTNKNMQSRMDTMEEVVVTV-------REDLQREVGTIKDEIMAMNKRFDHLLQMQEEAA 60

Query: 61  --TRDDKGKGLEKIDVGEKTPQSIATSSDGSNQLTNALAPVFDLRLRKLEVPIFEGENPD 120
                  GKG E               + GS   +N      D R RKLE+P+F+G NPD
Sbjct: 61  RVAASSSGKGKESTSRVPTVGGPAIGVTHGSEGTSNVFEHRRDFRFRKLEMPVFDGTNPD 120

Query: 121 AWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWEEFRLLLLQRFR 180
            W+ +  RYF + R  ++EKLEA+V+  +G+AL W+QWE +K P+  WEE +LL+L++FR
Sbjct: 121 GWILKAERYFSLQRFNNEEKLEASVIGFEGDALLWYQWEHKKRPMFLWEEMKLLILKQFR 180

Query: 181 PTLEGTLCDRFMAVKQETTVRDYR 201
            T EG+L ++F+A++Q+ TV++YR
Sbjct: 181 STQEGSLHEQFLALRQQGTVKEYR 197

BLAST of Moc06g16550 vs. ExPASy TrEMBL
Match: W9RBJ4 (Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024931 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.4e-27
Identity = 54/98 (55.10%), Postives = 77/98 (78.57%), Query Frame = 0

Query: 99  DLRLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERK 158
           DL LR+LE+P+FEG+NP+ WL RV RYF +NRLT+++KL AA +C  G+ALAW QWE+ +
Sbjct: 98  DLGLRRLEMPLFEGDNPEGWLFRVERYFSVNRLTEEDKLSAAAICFKGDALAWFQWEDGR 157

Query: 159 NPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTV 197
           NP+++W E +  LL RFR + EGT  D+F+A++Q+ TV
Sbjct: 158 NPVRSWLELKRKLLDRFRSSQEGTALDKFLAIQQKGTV 195

BLAST of Moc06g16550 vs. ExPASy TrEMBL
Match: A0A5C7IJS7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.5e-27
Identity = 64/176 (36.36%), Postives = 102/176 (57.95%), Query Frame = 0

Query: 29  ESWKKEMALFKDEMRLWMTAVSQRMGMEEK----TRDDKGKGLEKIDVGEKTPQSIATSS 88
           E  ++E+   KDE+      +   + M+E+         GKG E               +
Sbjct: 13  EELQREVGTIKDEIMAMNKRLDHLLQMQEEAARVAASSSGKGKESTSHVPTVGGPTIGVT 72

Query: 89  DGSNQLTNALAPVFDLRLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCL 148
            GS   +N      D R RKLE+P+F+G NPD W+ +   YF + R  ++EKLEA+V+  
Sbjct: 73  HGSEGTSNVFEHRRDFRFRKLEMPVFDGTNPDGWILKAECYFSLQRFNNEEKLEASVIGF 132

Query: 149 DGEALAWHQWEERKNPIQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR 201
           +G+AL W+QWE +K P+  WEE +LL+L++FR T EG+L ++F+A++Q+ TV++YR
Sbjct: 133 EGDALLWYQWEHKKRPMFLWEEMKLLILKQFRSTQEGSLHEQFLALRQQGTVKEYR 188

BLAST of Moc06g16550 vs. ExPASy TrEMBL
Match: A0A7J6HNQ9 (Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_019159 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.7e-26
Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 0

Query: 2   VATRMESRVEAVEQQISGVVSAIEDSRESWKKEMALFKDE-----------MRLWMT--- 61
           V TRMESRV+ VE  ++GV SA+            L K              RL ++   
Sbjct: 3   VITRMESRVKEVEVAVTGVQSAVSGVNNQLNDHGVLLKTHGVELQSLKEVLNRLVISNGR 62

Query: 62  AVSQRMGMEEKTRDDKGKGLEKIDVGEKTPQSIATSSDGSN-------QLTNALAPVFDL 121
            V +   + E +  + G G      GE++  +    S+G N       + T    P  + 
Sbjct: 63  IVDELASLRENSNGNHGSGRRL--QGERSTATGGAGSNGRNVGIGFTGRDTVLGEPRNEF 122

Query: 122 RLRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNP 181
             +K+E+P+F G+NPD W +R  RYF + RL+  E+LEAAVLCL+G AL W +WE +++ 
Sbjct: 123 HAQKIELPLFSGDNPDKWAYRAERYFGLQRLSPPEQLEAAVLCLEGAALNWFRWENQRHA 182

Query: 182 IQTWEEFRLLLLQRFRPTLEGTLCDRFMAVKQETTVRDYR 201
           I +WEE + LLL+RF    EGT+ DRF    Q TTV+DYR
Sbjct: 183 INSWEELKSLLLRRFCQKAEGTVFDRFFVHHQVTTVQDYR 220

BLAST of Moc06g16550 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 7.4e-11
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 0

Query: 102 LRKLEVPIFEGENPDAWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPI 161
           +R++E+P+F+G     W  +V R+FR+ R  D +KL+   L L+G AL W   E      
Sbjct: 107 IRRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEF 166

Query: 162 QTWEEFRLLLLQRFRP 178
           + W  F   LL RF P
Sbjct: 167 RDWNSFEQRLLARFDP 182

BLAST of Moc06g16550 vs. TAIR 10
Match: AT3G44713.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14800.1); Has 69 Blast hits to 64 proteins in 24 species: Archae - 2; Bacteria - 10; Metazoa - 4; Fungi - 4; Plants - 36; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 22/70 (31.43%), Postives = 35/70 (50.00%), Query Frame = 0

Query: 108 PIFEGENPD--AWLHRVARYFRINRLTDDEKLEAAVLCLDGEALAWHQWEERKNPIQTWE 167
           P F G   +  +W+  +  +F     TDDEK+  A   ++GEA AW    ++    ++WE
Sbjct: 7   PTFNGVTHELRSWISWLEDFFVWENFTDDEKMNLAQSLIEGEAEAWFYRRQKMILFRSWE 66

Query: 168 EFRLLLLQRF 176
             R  L+ RF
Sbjct: 67  HLRDCLVLRF 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022897442.12.9e-3339.90uncharacterized protein LOC111411108 [Olea europaea var. sylvestris][more]
EXB38291.15.7e-2954.90hypothetical protein L484_013924 [Morus notabilis][more]
TXG60193.11.3e-2835.29hypothetical protein EZV62_014766 [Acer yangbiense][more]
XP_038904464.11.3e-2836.77uncharacterized protein LOC120090832 [Benincasa hispida][more]
XP_024017591.11.8e-2739.15uncharacterized protein LOC112090471 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
W9QTX52.7e-2954.90Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981... [more]
A0A5C7HSW36.1e-2935.29Chromo domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014766 P... [more]
W9RBJ44.4e-2755.10Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_02... [more]
A0A5C7IJS77.5e-2736.36Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1[more]
A0A7J6HNQ91.7e-2636.82Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_019... [more]
Match NameE-valueIdentityDescription
AT1G67020.17.4e-1136.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G44713.12.3e-0431.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 140..199
e-value: 6.7E-6
score: 26.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g16550.1Moc06g16550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
molecular_function GO:0003824 catalytic activity