Moc06g15060 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g15060
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Locationchr6: 11773278 .. 11774384 (+)
RNA-Seq ExpressionMoc06g15060
SyntenyMoc06g15060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCAAGGAAGCTTCATCCACCATGGAAGAAAAGTTGGTGGAAATGGAGAAGAAACTTAACATGCTGACAAAAATGGTCGAAGAGGGGGACTATAAGATTGATTTCCTTATGAACCAGATCGAAATTCAAGATGTTGTGAATGTTGCTGAGTCAAGCCAAAATCAAATTGTGAAAGTCAGCGACAAAAGAAAGAACATCATGCAAGAAGAACAACTAGAACACTCTGTTGTAATTGCTTCACTGTCTGTCCGGTAGCTCCAAGATATGATCACAAATTCGATCAAAGCTCAGTATGGTGGACCTTATCAAAGCTTCCTCATGTACTTCAAGCCATACACCAAGAAGATCGACAACTTGATAATGCCTATGGGATATCAACCTCCAAAGTTCCAACAATTTGACGGAAAGGGCAATCCTAAGAGACATATTGCTCATTTCGTTGAAACATGTGAAAATGCTGGCACTTGAGGAGATCTACTCGTCAAACAATTTGTCCGAACACTAAAGAACAATGCTTTTGACTGGTACACAGATCTGGAGCCTGAATCCATCAACGACTGGGAGCAGTTGGAAAGAGAGTTCTTAAATCGCTTCTACAGCACAAGGCGAACAGTGAGCATGATGGAACTCACGAACACCAAGCAAAGACAAGGTGAACTTGTTGTTGACTATATTAACAGGTGGAGAGCTTTGAGTCTCGACTGCAAAGACTGATTGACTGAAGTGTTTGTAGTAGAAATGTTCACCCAGGGCATGTATTGGGGACTTCTCTACATTCTCCAAGGTATAAAACCCAGCACGATTGAAGAATTAGCAACTCACGCCCACGACATGGAGCTAAGTATTGCTAGTCAAAGAGATAAAGATCTTTTAGTCCCTGACATAAAGAGAGTAAGCAAGAATGCCGAGACGACTTCAGAAGAATCAATGGTTATCAACACAACCTATCTCAAGTCTTGTTCAAAAAGAAATGATAAGAAGGTTGAAAAACGACAAGAAAATGAAAGGCATCGTCTAACTCTAAAGGAAAGACAAGAAAAAGTTTATCCTTTTCCTGATTCTGACATCTCTGACATGTTAGAACAACTACTAAAAATGTAA

mRNA sequence

ATGGCATCCAAGGAAGCTTCATCCACCATGGAAGAAAAGTTGGTGGAAATGGAGAAGAAACTTAACATGCTGACAAAAATGGTCGAAGAGGGGGACTATAAGATTGATTTCCTTATGAACCAGATCGAAATTCAAGATGTTGTGAATGTTGCTGAGTCAAGCCAAAATCAAATTGTGAAACTCCAAGATATGATCACAAATTCGATCAAAGCTCAGTATGGTGGACCTTATCAAAGCTTCCTCATGTACTTCAAGCCATACACCAAGAAGATCGACAACTTGATAATGCCTATGGGATATCAACCTCCAAAGTTCCAACAATTTGACGGAAAGGGCAATCCTAAGAGACATATTGCTCATTTCGTTGAAACATATCTGGAGCCTGAATCCATCAACGACTGGGAGCAGTTGGAAAGAGAGTTCTTAAATCGCTTCTACAGCACAAGGCGAACAGTGAGCATGATGGAACTCACGAACACCAAGCAAAGACAAGTAGAAATGTTCACCCAGGGCATGTATTGGGGACTTCTCTACATTCTCCAAGGTATAAAACCCAGCACGATTGAAGAATTAGCAACTCACGCCCACGACATGGAGCTAAGTATTGCTAGTCAAAGAGATAAAGATCTTTTAGTCCCTGACATAAAGAGAGTAAGCAAGAATGCCGAGACGACTTCAGAAGAATCAATGGTTATCAACACAACCTATCTCAAGTCTTGTTCAAAAAGAAATGATAAGAAGGTTGAAAAACGACAAGAAAATGAAAGGCATCGTCTAACTCTAAAGGAAAGACAAGAAAAAGTTTATCCTTTTCCTGATTCTGACATCTCTGACATGTTAGAACAACTACTAAAAATGTAA

Coding sequence (CDS)

ATGGCATCCAAGGAAGCTTCATCCACCATGGAAGAAAAGTTGGTGGAAATGGAGAAGAAACTTAACATGCTGACAAAAATGGTCGAAGAGGGGGACTATAAGATTGATTTCCTTATGAACCAGATCGAAATTCAAGATGTTGTGAATGTTGCTGAGTCAAGCCAAAATCAAATTGTGAAACTCCAAGATATGATCACAAATTCGATCAAAGCTCAGTATGGTGGACCTTATCAAAGCTTCCTCATGTACTTCAAGCCATACACCAAGAAGATCGACAACTTGATAATGCCTATGGGATATCAACCTCCAAAGTTCCAACAATTTGACGGAAAGGGCAATCCTAAGAGACATATTGCTCATTTCGTTGAAACATATCTGGAGCCTGAATCCATCAACGACTGGGAGCAGTTGGAAAGAGAGTTCTTAAATCGCTTCTACAGCACAAGGCGAACAGTGAGCATGATGGAACTCACGAACACCAAGCAAAGACAAGTAGAAATGTTCACCCAGGGCATGTATTGGGGACTTCTCTACATTCTCCAAGGTATAAAACCCAGCACGATTGAAGAATTAGCAACTCACGCCCACGACATGGAGCTAAGTATTGCTAGTCAAAGAGATAAAGATCTTTTAGTCCCTGACATAAAGAGAGTAAGCAAGAATGCCGAGACGACTTCAGAAGAATCAATGGTTATCAACACAACCTATCTCAAGTCTTGTTCAAAAAGAAATGATAAGAAGGTTGAAAAACGACAAGAAAATGAAAGGCATCGTCTAACTCTAAAGGAAAGACAAGAAAAAGTTTATCCTTTTCCTGATTCTGACATCTCTGACATGTTAGAACAACTACTAAAAATGTAA

Protein sequence

MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVKLQDMITNSIKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETYLEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQVEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKRVSKNAETTSEESMVINTTYLKSCSKRNDKKVEKRQENERHRLTLKERQEKVYPFPDSDISDMLEQLLKM
Homology
BLAST of Moc06g15060 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 5.2e-84
Identity = 197/376 (52.39%), Postives = 236/376 (62.77%), Query Frame = 0

Query: 1   MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK 60
           M+   A   +E  + EME+K+N+L K+V+E D++I  L  Q++ ++    AESSQ  +VK
Sbjct: 82  MSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRE---TAESSQTPVVK 141

Query: 61  ----------------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKID 120
                                       LQDMITNSI+AQYGGP Q+  MY KPYTK+ID
Sbjct: 142 VDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQYGGPSQTSFMYSKPYTKRID 201

Query: 121 NLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--------------------------- 180
           NL MP+GYQPPKFQQFDGKGNPK+H+AHFVET                            
Sbjct: 202 NLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYT 261

Query: 181 -LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQ-------------------- 240
            LEPESI  WEQLE+EFLNRFYSTRRTVSMMELTNTKQR+                    
Sbjct: 262 DLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKD 321

Query: 241 -------VEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKR 286
                  VEM TQGM+WGLLYILQGIKP T EELAT AHDMELSIAS+  KD LVP++K+
Sbjct: 322 RLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKK 381

BLAST of Moc06g15060 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 5.2e-84
Identity = 197/376 (52.39%), Postives = 236/376 (62.77%), Query Frame = 0

Query: 1   MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK 60
           M+   A   +E  + EME+K+N+L K+V+E D++I  L  Q++ ++    AESSQ  +VK
Sbjct: 82  MSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRE---TAESSQTPVVK 141

Query: 61  ----------------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKID 120
                                       LQDMITNSI+AQYGGP Q+  MY KPYTK+ID
Sbjct: 142 VDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQYGGPSQTSFMYSKPYTKRID 201

Query: 121 NLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--------------------------- 180
           NL MP+GYQPPKFQQFDGKGNPK+H+AHFVET                            
Sbjct: 202 NLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYT 261

Query: 181 -LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQ-------------------- 240
            LEPESI  WEQLE+EFLNRFYSTRRTVSMMELTNTKQR+                    
Sbjct: 262 DLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKD 321

Query: 241 -------VEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKR 286
                  VEM TQGM+WGLLYILQGIKP T EELAT AHDMELSIAS+  KD LVP++K+
Sbjct: 322 RLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKK 381

BLAST of Moc06g15060 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-83
Identity = 196/376 (52.13%), Postives = 236/376 (62.77%), Query Frame = 0

Query: 1   MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK 60
           M+   A   +E  + EME+K+N+L K+V+E D++I  L  Q++ ++    AESSQ  +VK
Sbjct: 82  MSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRE---TAESSQTPVVK 141

Query: 61  ----------------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKID 120
                                       LQDMIT+SI+AQYGGP Q+  MY KPYTK+ID
Sbjct: 142 VDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQYGGPSQTSFMYSKPYTKRID 201

Query: 121 NLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--------------------------- 180
           NL MP+GYQPPKFQQFDGKGNPK+H+AHFVET                            
Sbjct: 202 NLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYT 261

Query: 181 -LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQ-------------------- 240
            LEPESI  WEQLE+EFLNRFYSTRRTVSMMELTNTKQR+                    
Sbjct: 262 DLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKD 321

Query: 241 -------VEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKR 286
                  VEM TQGM+WGLLYILQGIKP T EELAT AHDMELSIAS+  KD LVP++K+
Sbjct: 322 RLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKK 381

BLAST of Moc06g15060 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 4.4e-83
Identity = 195/376 (51.86%), Postives = 236/376 (62.77%), Query Frame = 0

Query: 1   MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK 60
           M+   A   +E  + EME+K+N+L K+V+E D++I  L  Q++ ++    AESSQ  +VK
Sbjct: 82  MSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRE---TAESSQTPVVK 141

Query: 61  ----------------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKID 120
                                       LQDMIT+SI+AQYGGP Q+  MY KPYTK+ID
Sbjct: 142 VDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQYGGPSQTSFMYSKPYTKRID 201

Query: 121 NLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--------------------------- 180
           NL MP+GYQPPKFQQFDGKGNPK+H+AHFVET                            
Sbjct: 202 NLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYT 261

Query: 181 -LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQ-------------------- 240
            LEPESI  WEQLE+EFLNRFYSTRRTVSMMELTNTKQR+                    
Sbjct: 262 DLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKD 321

Query: 241 -------VEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKR 286
                  VEM TQGM+WGLLYILQGIKP T EELAT AHDMELSIAS+  KD LVP++K+
Sbjct: 322 RLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKK 381

BLAST of Moc06g15060 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 9.7e-83
Identity = 195/376 (51.86%), Postives = 235/376 (62.50%), Query Frame = 0

Query: 1   MASKEASSTMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK 60
           M+   A   +E  + EME+K+N+L K+V+E D++I  L  Q++ ++    AESSQ  +VK
Sbjct: 82  MSVMMADVAVETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRE---TAESSQTPVVK 141

Query: 61  ----------------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKID 120
                                       LQDMIT+SI+AQYGGP Q+  MY KPYTK+ID
Sbjct: 142 VDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQYGGPSQTSFMYSKPYTKRID 201

Query: 121 NLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--------------------------- 180
           NL MP+GYQPPKFQQFDGKGNPK+H+AHFVET                            
Sbjct: 202 NLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYT 261

Query: 181 -LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNTKQRQ-------------------- 240
            LEPESI  WEQLE+EFLNRFYSTRRTVSMMELTNTKQR+                    
Sbjct: 262 DLEPESIESWEQLEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKD 321

Query: 241 -------VEMFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKR 286
                  VEM TQGM+WGLLYILQGIKP T EELAT AHDMELSIAS+  KD LVP++K+
Sbjct: 322 RLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKK 381

BLAST of Moc06g15060 vs. ExPASy TrEMBL
Match: A0A5A7UXF0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006290 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 6.8e-82
Identity = 188/367 (51.23%), Postives = 228/367 (62.13%), Query Frame = 0

Query: 9   TMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVK-------- 68
           T E ++ E+EKK+NML K+VEE DY+I FL N IE +D    AESS   IVK        
Sbjct: 59  TSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRD---AAESSHKHIVKNTDKGKAV 118

Query: 69  -------------------LQDMITNSIKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQ 128
                              LQ+MI +SIK QYGGP Q+F +Y KPYTK+IDNL MP GYQ
Sbjct: 119 MQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQ 178

Query: 129 PPKFQQFDGKGNPKRHIAHFVETY----------------------------LEPESIND 188
           PPKFQQFDGKGNPK+H+AHF+ET                             LEPESI++
Sbjct: 179 PPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDN 238

Query: 189 WEQLEREFLNRFYSTRRTVSMMELTNTKQRQ---------------------------VE 248
           WEQLER+FLNRFYSTRR VSMMELTNT+Q++                           VE
Sbjct: 239 WEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVINYINRWRALSLDCKDRLTELSAVE 298

Query: 249 MFTQGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVP-------DIKRVS 286
           M TQGM+WGLLYILQGIKP T EELAT AHDMELSIA++  KD L+P       ++    
Sbjct: 299 MCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTK 358

BLAST of Moc06g15060 vs. ExPASy TrEMBL
Match: A0A5D3D4X3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001130 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.8e-81
Identity = 183/362 (50.55%), Postives = 229/362 (63.26%), Query Frame = 0

Query: 11  EEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVN---------------VAESSQ 70
           E+++ E+EKK+NML K+VEE DY+I FL N IE +D                  V + SQ
Sbjct: 61  EDRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 120

Query: 71  NQ---------IVKLQDMITNSIKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQPPKFQ 130
            Q         + +LQ+MI +SIK QYGGP Q+F +Y KPYTK+IDNL MP GYQPPKFQ
Sbjct: 121 PQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180

Query: 131 QFDGKGNPKRHIAHFVETY----------------------------LEPESINDWEQLE 190
           QFDGKGNPK+H+AHF+ET                             LEPESI++WEQLE
Sbjct: 181 QFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLE 240

Query: 191 REFLNRFYSTRRTVSMMELTNTKQRQ---------------------------VEMFTQG 250
           R+FLNRFYSTRR VSMMELTNT+Q++                           VEM TQG
Sbjct: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQG 300

Query: 251 MYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVP-------DIKRVSKNAET 286
           M+WGLLYILQGIKP T EELAT AHDMELSIA++  KD L+P       ++    K A +
Sbjct: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANS 360

BLAST of Moc06g15060 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.5e-81
Identity = 185/364 (50.82%), Postives = 230/364 (63.19%), Query Frame = 0

Query: 9   TMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVN---------------VAES 68
           T E+++ E+EKK+NML K VEE D++I  L N IE +D                  + + 
Sbjct: 91  TSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQE 150

Query: 69  SQNQ---------IVKLQDMITNSIKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQPPK 128
           SQ Q         + +LQ+MI NSIK QYGGP Q+F +Y KPYTK+IDN+ MP GYQPPK
Sbjct: 151 SQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPK 210

Query: 129 FQQFDGKGNPKRHIAHFVETY----------------------------LEPESINDWEQ 188
           FQQFDGKGNPK+H+AHF+ET                             LEPESI+ WEQ
Sbjct: 211 FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQ 270

Query: 189 LEREFLNRFYSTRRTVSMMELTNTKQRQ---------------------------VEMFT 248
           LER+FLNRFYSTRR VSM+ELT TKQR+                           VEM T
Sbjct: 271 LERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCT 330

Query: 249 QGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVPDIKRVSKNAETT---- 286
           QGM+WGLLYILQGIKP T EELAT AHDMELSIA++ + DLLVP++++  K  ++T    
Sbjct: 331 QGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKKEVKSTQKAL 390

BLAST of Moc06g15060 vs. ExPASy TrEMBL
Match: A0A5A7URH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17350G00010 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.5e-81
Identity = 183/364 (50.27%), Postives = 229/364 (62.91%), Query Frame = 0

Query: 9   TMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVN---------------VAES 68
           T E ++ E+EKK+NML K+VEE DY+I FL N IE +D                  V + 
Sbjct: 91  TSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQE 150

Query: 69  SQNQ---------IVKLQDMITNSIKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQPPK 128
           SQ Q         + +LQ+MI +SIK QYGGP Q+F +YFKPYTK+IDNL MP GYQPPK
Sbjct: 151 SQPQNSTSIASLSVQQLQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPNGYQPPK 210

Query: 129 FQQFDGKGNPKRHIAHFVETY----------------------------LEPESINDWEQ 188
           FQQFDGKGNPK+H+AHF++T                             LEPESI++WEQ
Sbjct: 211 FQQFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPESIDNWEQ 270

Query: 189 LEREFLNRFYSTRRTVSMMELTNTKQRQ---------------------------VEMFT 248
           LER+FLNRFYSTR  VSMMELTNT+Q++                           VEM T
Sbjct: 271 LERDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCT 330

Query: 249 QGMYWGLLYILQGIKPSTIEELATHAHDMELSIASQRDKDLLVP-------DIKRVSKNA 286
           QGM+WGLLYILQGIKP T EELAT AHDMELSIA++  KD L+P       ++    K A
Sbjct: 331 QGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIA 390

BLAST of Moc06g15060 vs. ExPASy TrEMBL
Match: A0A5A7UK68 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00050 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 7.5e-81
Identity = 181/340 (53.24%), Postives = 224/340 (65.88%), Query Frame = 0

Query: 9   TMEEKLVEMEKKLNMLTKMVEEGDYKIDFLMNQIEIQDVVNVAESSQNQIVKLQDMITNS 68
           T E ++ E+EKK+NML K+VEE DY+I FL N I+ +D    AESS     K  +MI +S
Sbjct: 59  TSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIKSRD---AAESSH----KHTEMIASS 118

Query: 69  IKAQYGGPYQSFLMYFKPYTKKIDNLIMPMGYQPPKFQQFDGKGNPKRHIAHFVETY--- 128
           IK QYGGP Q+F +Y KPYTK+IDNL MP GYQPPKFQQFDGKGNPK+H+AHF+ET    
Sbjct: 119 IKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETA 178

Query: 129 -------------------------LEPESINDWEQLEREFLNRFYSTRRTVSMMELTNT 188
                                    LEP+SI++WEQLER+FLNRFYSTRR VSMMELTNT
Sbjct: 179 GTRGDLLVKQFVRTLKGNAFDWYIDLEPKSIDNWEQLERDFLNRFYSTRRIVSMMELTNT 238

Query: 189 KQRQ---------------------------VEMFTQGMYWGLLYILQGIKPSTIEELAT 248
           +Q++                           VEM TQGM+WGLLYILQGIKP T EELAT
Sbjct: 239 RQQKGELVIDYINRWRALSLDYKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELAT 298

Query: 249 HAHDMELSIASQRDKDLLVP-------DIKRVSKNAETTSEESMVINTTYLKSCSKRNDK 286
            AHDMELSIA++  KD L+P        +    K A +  +ESMV++ T LKS SKR + 
Sbjct: 299 RAHDMELSIANRGAKDFLIPKSRSDKNGLDDTKKIANSVIKESMVVHATPLKSFSKRKET 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031742199.15.2e-8452.39uncharacterized protein LOC105435721 [Cucumis sativus][more]
XP_031735972.15.2e-8452.39uncharacterized protein LOC116401693 [Cucumis sativus][more]
XP_031740568.12.0e-8352.13uncharacterized protein LOC116403508 [Cucumis sativus][more]
XP_031739134.14.4e-8351.86uncharacterized protein LOC116402863 [Cucumis sativus][more]
XP_031742032.19.7e-8351.86uncharacterized protein LOC116404025 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UXF06.8e-8251.23Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3D4X35.8e-8150.55Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TZU97.5e-8150.82Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5A7URH17.5e-8150.27Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UK687.5e-8153.24Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g15060.1Moc06g15060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process