Moc06g12760 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g12760
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	chr6: 9862641 .. 9866778 (-)
RNA-Seq Expression	Moc06g12760
Synteny	Moc06g12760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGCCGCCCTGTGCGTGTGTCGTCAGCGGTGAATAGGTGAATCCGTGGTGGAGTGGAGATTTTGTTTTCTAATTCAATTTAAATTTAAACAATCCTATTCTTAATTTCCTATTACGTATTATATCACTTACCTTACCCGATTTCAGCAAATCAAAATTACAAAATAGCCAGTGAAGATTTCAAAGATTTCAATTTGAAAACTGAAAAGGAAAATACAGTACATTTTAATCTAAATTGAAAAGATATTATTTATTTGACTTTTATTTTATTTTCTAATACCAATTATCCCTCATCAAATCAAATCTTTCATCCTTATCATTCTCGACTTCTCATTCCGTCGCTCTAAGCCTCGAACTTCCTTTTGCCATAGTGCTGTTATGAACTTCTACGTGTTGGTAGGGTAAGGGTAGTGCATTGTACGTTGTGCGTTGTACTGCTTAGTGAAATCTTCTCCATTCTAAACTTCCTTCTCGACTTCTCATTACGCTGTTCACCTTGGGTCGACACTCAGCATTCAGCAATCACAAACAATCAGCATTTGACTTGGGTAAGAAAATAATATTGCTAAAGCCTAAAACTTCTAAATTTTGATGAAGGATATAAAATAGAAATTGGGTTTTAAATGTTGATGTTTTAAATTTTAACTTCTAAACTTAGTTAGAAGTTACTAATTAGAATAAAAACTTGATTTTTTTCCCAAATTGTCAATTGTCAAAGGTGATAGACAAATAGAGTATATATCATGTCAAAATCAATACGGAATGAAGAAAGTAGACGTGATTGTTGCGAGGATGAGAATGACGATATGGATGAAATTGGTGAGATGCCACCTCCACCCCTCGAAAAAAGGAGGAAAAGAACTTCAATGGTATGGGATCACTTTACTAGATTGCATGATTGTACTGAGAATAAACTACAAGCCAAATGTAATTATTGTGATACTATATATGCATGTCATACAAAAAGAAACGGGACAGGAACGATGAAATTACACATTGAGAGTTATTGTAAAAAGAGCCCCTATGTGAAGAAGAAAGATGCGTCTCAACAAAAACTGGTGTTTAAAAATAATGAGAATGTAGGAGTAAACATCTCACTAAAATGCGTAGCTTTTAGTGTAGAGGATGCAAGAAAGCTCCTTGCTGAGATGATCATTATTCATGAATTGTCTTTTAGATTTGTGGAGAGTGAAGGTTTTAAGAGATTCATAGAGGGGACCATCAATTTATTAGAACCGAAGTTTGTTCTCCCTTCTCGAACTACAATTGCTAAGGATATTTTAGAAATATATGCTAGTAAAAAATAAGAAATTAAAGAACTTTTGGTGAATGAAGGGTATAGAATTTCACTTACAACAGATACTTGGACATCTTGTCAAAATATCAATTATATGGTCTTGACTGCACATTTTATTGATTGTAACTGGAAGTTGCATAAGAAGATCATCAACTTTTCTCAAATTGATAATCATAAAGGGGAGACTATAGGTAGAGAAGTTGAAAGATGTTTGAAACAATGGGGGATAGAAAAGGTGTTGACATTGACTGTTGATAATGCTTCATCAAATGATACTGCTATTGCTTATCTAGTTAAGCGATTCAAACAAGGATTGGTGCTTAATGGTGAATTTTTGCATGTTAGGTGTTGTGCACATATTCTGAATTTGATTGTGAGTGATGGTTCGAAAGATGTGCATGAGTCAGTTAGTAGGATTTGAAATGTTGTAAGATTTGTTAGATCTTCTCCTGCTAGATTTGGTAAATTTAAGAAGTGTATTTAAGAGGAGAATATATATAGTAATAGTCTTTTATGTCTTGATGTTCCAACTAGGTGGAACTTGACATATTTAATGCTTGATGTTGCAGAAAAATTTGAGAAGGCATTTGAACGATTAGAAGACCACGACTTAGCCTATTTTAATATGAAAGATGATCAGAATCCAAAAAGTACTGATTGGGAGATTGCTCGTACATTTACTAAATTGTTATCAGTATTTTATGAAGTGACCATTAGAATTTCTGGTTCTCTTTATAGTACTTCCAATATGGTCTTCCATGAGATTTCTACTATCCAAAATTGTATAAGAAACTATTCTTGTGATAGCAGTAATCCCATTCTTGCTAGCGTAGCGACCAAAATGCAGCTGAAATATGATAAGTATTGGGGGAATACTGAAAAGGCAAATTATTTATTATATGTTGCATTTGTTCTCGACCCTCGTTATAAGATGAACTTTCTTATGTATTGTTTCACTCAACTATTCGAAGCTAATGTTGCAAAGGAAATAGGAAAGAAAGTGGAAGATGTTTTGAGACAGCTATTTACTGAGTATAATTTGTCTATGCCTAAGAATGTTTCTTCTACTTCGAAGGGTCGGATGAGTCAATCTATTGTTGCTTCTACTAGTGATAGTGTTGTACAGCCTTTCCGCTTTCAAGTCAGTAATATGACAAATTATAAAAATAATGTTGATGTGGATTCAGAGGTGGAACGTTACTTGTTAGAGCATAATACAGAAGATGATGAGAATTTTAACATCTTAGACTGGTGGAAAGTTAACTCTTCTAAATATAGGGTTCTTAGCAAGGTTGCAAGAGATGTTTTAGCAATTCCAGTGTCTACTGTTGCTTCTGAGTCTGCATTTAGTACTAGTGGGAGAGTAATTGATCCTTTTCGCTCCACGTTGGCTCCAGCTACAGTTGAGGCACTTATTTGTGTACAAAATTGGCTACGCCCAAATGCTATTACTATTGACCTTCGATCGCATTTGGAAGAAGTTTGTCGTGTTGAAGAAAGTATGAAACTTCATTAAAGAATTATTTTATGTTTTGTAATATTAATAAGCTAAATATAAATTCTTTTTATTTTTGCAGATTTCAACAAATTTACATTAGATGAAGTAACAAATAATAACAAGGACAAGACTACGAGAGAAATGATAATGTTTCATGAAATATTATTGTTTAAAGTTTAAACTTTCATGTTTAGGTTTATATTTTATTTACAATTTAAAACTTTATCGTGTCTCTTAAATTTTATTGTTTATTTTAAAATTTGGACTTATTGCTACTCAATACTCCATAGTTATTCACTTTTATTTATGAATTATGATTTGTATTTTCGTTAGCAAATAACATTATTTTTTTTCTCTTTAATTTTTGAGATTGCAGCACTTGGATTAAGGATACTTTTTAATTTTTATGATGAATTTTTAAAATTTTAATACCCAGACTTTCAAGTTTCAATTGCAATGTGTAAGACTAAGTGCCGTTCTTGTTAAATGTTAATTGTTATTAAATTATGCTCTCATAAAGAAGTTATTTTTTGTCTTCGGCTAGACAATCAAGTCCACTATAACCAAAGCAAATTTAAAATTAGAAAAAAAAAGAAGAAGTTGAAAGGCCCACAGCCCGCATCGCCAGCCCACTTGCCCTAAGCCCCAAACAAGCAAACACGTGCAACCCCGCCCGCCCCGACCCGAACCCGCGCGCATCTGCCTGTTGTGCATGCATGCGGTTTACCCGCCAAGCCGAACCGACGAACCCAACGGTTCTTTCACCGGTTTGGTGCGGTTTTCGAACAAATTATCGGTCGGCTCGGTTTTTTATTATTTATTCTATATTGTTCGGTTCGACTTTCGGTTCTGCGATAAACACGACCGAATCGAGCCGTTTACACCCCTAGTTCCAAGTTAGTCATGTCTAACCTATTGGCTAGATCTAGAACAAGTTTCTTGAGACACCATTTGTGGTACAATTTTGTCCGGGTCAACCACCAAAAACTTCTTATGTGTCTCCTCTTCACATTCATTCCAAAGATACCTAAACATATAATTGTAAAACATTAAACTTCATAGTTAGCGAAGTTAAGATATGAAATAGATTTAATATACTTACGCGATGTACGTGAGTACACACATATAGCCTATTTCAATCATCTCGCAGTATTGCATGATGTTATCACGTGTTAGACTAATGATCTTCTCCCTTCCAAATATGTAATCACTGATATTGAATTCAATTACATCCTTGTTGTTAATTGAACGCACGACATATTGATTTAGGAGTTTAATAGTCATGTGGACATCAATATGTTCAGATGATTGTGTTCTTGGCTTGGATGTTCGAGGATAA

mRNA sequence

ATGGTGGGCCGCCCTGTGCGTGTGTCGTCAGCGGTGAATAGTAATCCCATTCTTGCTAGCGTAGCGACCAAAATGCAGCTGAAATATGATAAGTATTGGGGGAATACTGAAAAGGCAAATTATTTATTATATGTTGCATTTGTTCTCGACCCTCGTTATAAGATGAACTTTCTTATGTATTGTTTCACTCAACTATTCGAAGCTAATGTTGCAAAGGAAATAGGAAAGAAAGTGGAAGATGTTTTGAGACAGCTATTTACTGAGTATAATTTGTCTATGCCTAAGAATGTTTCTTCTACTTCGAAGGGTCGGATGAGTCAATCTATTGTTGCTTCTACTAGTGATAGTGTTGTACAGCCTTTCCGCTTTCAAGTCACTACAGTTGAGGCACTTATTTGTGTACAAAATTGGCTACGCCCAAATGCTATTACTATTGACCTTCGATCGCATTTGGAAGAAGTTTGTCGTGTTGAAGAAAATGATTGTGTTCTTGGCTTGGATGTTCGAGGATAA

Coding sequence (CDS)

ATGGTGGGCCGCCCTGTGCGTGTGTCGTCAGCGGTGAATAGTAATCCCATTCTTGCTAGCGTAGCGACCAAAATGCAGCTGAAATATGATAAGTATTGGGGGAATACTGAAAAGGCAAATTATTTATTATATGTTGCATTTGTTCTCGACCCTCGTTATAAGATGAACTTTCTTATGTATTGTTTCACTCAACTATTCGAAGCTAATGTTGCAAAGGAAATAGGAAAGAAAGTGGAAGATGTTTTGAGACAGCTATTTACTGAGTATAATTTGTCTATGCCTAAGAATGTTTCTTCTACTTCGAAGGGTCGGATGAGTCAATCTATTGTTGCTTCTACTAGTGATAGTGTTGTACAGCCTTTCCGCTTTCAAGTCACTACAGTTGAGGCACTTATTTGTGTACAAAATTGGCTACGCCCAAATGCTATTACTATTGACCTTCGATCGCATTTGGAAGAAGTTTGTCGTGTTGAAGAAAATGATTGTGTTCTTGGCTTGGATGTTCGAGGATAA

Protein sequence

MVGRPVRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKGRMSQSIVASTSDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEEVCRVEENDCVLGLDVRG

Homology

[Close]

BLAST of Moc06g12760 vs. NCBI nr
Match: XP_038890289.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 6.5e-26
Identity = 83/213 (38.97%), Postives = 109/213 (51.17%), Query Frame = 0


Query: 7   RVSSAVNSNPI-LASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 66
           + SSA   N + L  + TK+Q K+DKYWG  ++ N  LYVAF+LDPRYKM F +YC  QL
Sbjct: 201 KYSSATGPNDVLLQEMTTKIQEKFDKYWGKKDRINLFLYVAFILDPRYKMKFFLYCLNQL 260

Query: 67  FEANVAKEIGKKVEDVLRQLFTEYNLSM-------------------------PK----- 126
           F+ +VAK +G KV  VLR LF EYNLS+                         P+     
Sbjct: 261 FDVDVAKAVGSKVVGVLRALFNEYNLSLSVANKDLDEDDSQSVDSEVDIYLLEPRVKRED 320

Query: 127 --NVSSTSKGRMSQ----------------SIVAS-----TSDSVVQPFRFQV--TTVEA 164
             ++    KG  S+                SIVAS     T   V+ PFR  +  TT+E+
Sbjct: 321 NFDILDWWKGNSSRYKIFSKIARDLLAVPVSIVASESVFNTIRRVIDPFRTSLSPTTIES 380

[Close]

BLAST of Moc06g12760 vs. NCBI nr
Match: XP_022152188.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-24
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++L
Sbjct: 403 IKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKFLLYCFSEL 462

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNL 92
           F ANVAKE+ KKVED+LRQLF+EY L
Sbjct: 463 FGANVAKEMCKKVEDILRQLFSEYRL 488

[Close]

BLAST of Moc06g12760 vs. NCBI nr
Match: XP_022152189.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-24
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++L
Sbjct: 403 IKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKFLLYCFSEL 462

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNL 92
           F ANVAKE+ KKVED+LRQLF+EY L
Sbjct: 463 FGANVAKEMCKKVEDILRQLFSEYRL 488

[Close]

BLAST of Moc06g12760 vs. NCBI nr
Match: XP_022152198.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 8.2e-21
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +L
Sbjct: 131 IKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKFLSYCFRKL 190

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGRMSQSIVASTSDSVVQPF 122
           F+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S    S +   ST+D+    F
Sbjct: 191 FDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECSTNDATDDEF 247

[Close]

BLAST of Moc06g12760 vs. NCBI nr
Match: XP_022152197.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 8.2e-21
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +L
Sbjct: 131 IKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKFLSYCFRKL 190

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGRMSQSIVASTSDSVVQPF 122
           F+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S    S +   ST+D+    F
Sbjct: 191 FDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECSTNDATDDEF 247

[Close]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.8e-09
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 15  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEI 74
           +P +  +A  MQ K DKYW      + +L +A V+DPR+KM  + + F+++F  +  K I
Sbjct: 485 DPFVTGIAKTMQEKVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNI 544

Query: 75  GKKVEDVLRQLFTEYNLSMPKNVSSTSKG 104
            K V+D + +LFTEY +++P   ++TS+G
Sbjct: 545 -KTVDDGIHELFTEY-MALPSPQNTTSEG 568

[Close]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 36/140 (25.71%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 15  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEI 74
           +P+ +S+A  M  ++DKYW   +  N +L +A V+DPR+KM  + + +++++    AK +
Sbjct: 490 DPVFSSIAKDMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYV 549

Query: 75  GKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVASTSDSVVQPFRFQVTTVEALIC 134
            K V+D + +L+ EY    +P   +   +G  + +  +  S     P     +T + L+ 
Sbjct: 550 -KVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAP-----STGDGLVD 609

Query: 135 VQNWLRPNAITIDLRSHLEE 154
              +L   A +   +S LE+
Sbjct: 610 FDMYLSEIATSQPTKSELEQ 620

[Close]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07
Identity = 35/142 (24.65%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 13  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAK 72
           + +P+ +S+A  M  ++DKYW   +  N +L +A V+DPR+KM  + + +++++    AK
Sbjct: 488 HEDPVFSSIAKDMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAK 547

Query: 73  EIGKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVASTSDSVVQPFRFQVTTVEAL 132
            + K V+D + +L+ EY    +P   +   +G  + +  +        P     +T + L
Sbjct: 548 YV-KVVDDAVHELYKEYVAQPLPLTPAYVEQGDGNNAPASENGTQATAP-----STGDGL 607

Query: 133 ICVQNWLRPNAITIDLRSHLEE 154
           +    +L   A +   +S LE+
Sbjct: 608 VDFDMYLSEIATSQPTKSELEQ 620

[Close]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07
Identity = 26/81 (32.10%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 9   SSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEA 68
           ++  + +PI  S A  M  ++DKYW   +  N +L +A V+DPR+KM  + + ++++   
Sbjct: 525 NAIAHEDPIFRSTAKIMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSV 584

Query: 69  NVAKEIGKKVEDVLRQLFTEY 90
             AK + K V+D + +L++EY
Sbjct: 585 EAAKYV-KVVDDAIHELYSEY 601

[Close]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 20/77 (25.97%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 13  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAK 72
           + + ++  +   +  K+DKYW   +  N +L +A  +DPR+KM  + + +++++    A 
Sbjct: 457 HGDDVIRGIVIGIHEKFDKYW---KDCNVVLAIAVAMDPRFKMKMVEFAYSKIYGPTDAA 516

Query: 73  EIGKKVEDVLRQLFTEY 90
           +  K V+D +  L+ EY
Sbjct: 517 KYVKLVDDAILDLYKEY 530

[Close]

BLAST of Moc06g12760 vs. ExPASy TrEMBL
Match: A0A6J1DFA9 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++L
Sbjct: 403 IKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKFLLYCFSEL 462

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNL 92
           F ANVAKE+ KKVED+LRQLF+EY L
Sbjct: 463 FGANVAKEMCKKVEDILRQLFSEYRL 488

[Close]

BLAST of Moc06g12760 vs. ExPASy TrEMBL
Match: A0A6J1DE70 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++L
Sbjct: 403 IKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKFLLYCFSEL 462

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNL 92
           F ANVAKE+ KKVED+LRQLF+EY L
Sbjct: 463 FGANVAKEMCKKVEDILRQLFSEYRL 488

[Close]

BLAST of Moc06g12760 vs. ExPASy TrEMBL
Match: A0A6J1DGW5 (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charantia OX=3673 GN=LOC111019972 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           ++  S+   N IL  +A K+Q KYDKYW N   ANY LY+A VLDPR KM FLMYCF++L
Sbjct: 443 IKRCSSNGGNLILNDIAXKIQAKYDKYWWNNRNANYFLYIAVVLDPRXKMKFLMYCFSEL 502

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNL 92
           F ANVAKE+ KKVED+L++LF+EY L
Sbjct: 503 FGANVAKEMCKKVEDILKKLFSEYRL 528

[Close]

BLAST of Moc06g12760 vs. ExPASy TrEMBL
Match: A0A6J1DFJ0 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +L
Sbjct: 131 IKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKFLSYCFRKL 190

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGRMSQSIVASTSDSVVQPF 122
           F+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S    S +   ST+D+    F
Sbjct: 191 FDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECSTNDATDDEF 247

[Close]

BLAST of Moc06g12760 vs. ExPASy TrEMBL
Match: A0A6J1DE80 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 6   VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQL 65
           +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +L
Sbjct: 131 IKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKFLSYCFRKL 190

Query: 66  FEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGRMSQSIVASTSDSVVQPF 122
           F+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S    S +   ST+D+    F
Sbjct: 191 FDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECSTNDATDDEF 247

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BLAST of Moc06g12760 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-10
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 15  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEI 74
           +P +  +A  MQ K DKYW      + +L +A V+DPR+KM  + + F+++F  +  K I
Sbjct: 485 DPFVTGIAKTMQEKVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNI 544

Query: 75  GKKVEDVLRQLFTEYNLSMPKNVSSTSKG 104
            K V+D + +LFTEY +++P   ++TS+G
Sbjct: 545 -KTVDDGIHELFTEY-MALPSPQNTTSEG 568

The following BLAST results are available for this feature:

BLAST of Moc06g12760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890289.1	6.5e-26	38.97	zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]	[more]
XP_022152188.1	3.6e-24	65.12	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordi...	[more]
XP_022152189.1	3.6e-24	65.12	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordi...	[more]
XP_022152198.1	8.2e-21	50.43	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica ...	[more]
XP_022152197.1	8.2e-21	50.43	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica ...	[more]

BLAST of Moc06g12760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2N5	9.8e-09	37.08	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
B9FJG3	2.4e-07	25.71	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	7.0e-07	24.65	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
Q75HY5	7.0e-07	32.10	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q0JMB2	1.9e-04	25.97	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Moc06g12760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFA9	1.7e-24	65.12	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Momor...	[more]
A0A6J1DE70	1.7e-24	65.12	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Momor...	[more]
A0A6J1DGW5	4.0e-21	60.47	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charan...	[more]
A0A6J1DFJ0	4.0e-21	50.43	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordic...	[more]
A0A6J1DE80	4.0e-21	50.43	zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordic...	[more]

BLAST of Moc06g12760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	7.0e-10	37.08	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 12..89 e-value: 1.1E-18 score: 67.3
None	No IPR available	PANTHER	PTHR23272:SF137	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE	coord: 18..102
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 18..102
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 20..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g12760.1	Moc06g12760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0046983	protein dimerization activity