Moc06g06490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111025272
Location	chr6: 4716122 .. 4719523 (+)
RNA-Seq Expression	Moc06g06490
Synteny	Moc06g06490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCAGCGCTGGAAAATGCAAAGTCATTCCATTTCCATTAGCGTTACGCGACGCGTCGGGGGTTTGGCCAGGCGTTGGCCCGAATTTGGCGGCAAAATGTATACAACTACAATTTACAAACGCATTTTTCAATTTTTATAATTTTATGGGATTTGTAGATTGATGAGCTATTTTAAGATCCTAATTACATAAAAGGATGGAATGTATAGAATTTACACATTTGTCATGTATCAACCTTATTTATGAGGGTATCCATCACATAAATTACTTAAATACCCTAATGTATCTACAAATTAATTTTTAATTCATTTAAAGATGCAAAATTGATTAATTGGAAGGTTATAATTTGGATCTCATAATTTAAGGTTAATGATACTTTCCAAAATAGATTAAAAATCAAAAAAATTAAAAAGAAAACCCTAAATTAACCAAATTTGAAAACCCCCCAAAAATCCCCAAATCCCGTCTAAAACGTCCAACGATTTTTTTTCTCCGCATTTTACGCTTCCTCCGTCTGCGGTAGTCTATGGGTTGTGTAACCGTTCGTCGGTCGTCGTCTTCCTTGTCCGCCGTGACTGTTCCGGTCTGACTTCGCCGCGTTCGTCGGAAGCTGTATCGGTAAGTTTCCAGCCGTCGTCTTTGCTTTGTCTGCTTCAATTTCCGTCTGCACAATTCGTCTGTGTACTTCCGTCATTGTTGAAATGCTTCAGTTATATCCCATTTGCCGTATTCGTAGGTTTCAGACCTCCATTTACCGTCGGAGAACGAAATTTTGCAGGCGACATTTGAGGCGACATTCCAATAGTAAGGTGATGCATTCTGAATCGATTTCGTATATATGCGTATATATTGTATATATGTGTATATAGCTTATATTTGTAATTATGTTATAGTTACTAGTATATAAGGCGACATTCCAATATTGTATATATGTGTATATAACTGAATCGATTTCAAATTTCTGGTTTTCTGGAACTTCTAAAATGATTTGTTGTTTTGGTAATTTCTTGAAGGTGTGTCAATGGTGCTTTTTTTCATATGATTTATAAATTTGTCAAGTTGTTATTATAAAGTGGTTCATTTGGTGATTGGATATTCTTTGTTGTAGATTAAATTATGAACATAAATGATTTTGAAGTATTTGTTTGTATATATGTGAATATATTGTATATGAGGTATAAATTGTATACTTAATTGAATATCGTTTATTTGCCTATGGAAAATGAATTGTGTTTATGTATTCATGCTCCTTGGAATGACCTTATCCAAAGTTTAGGTTGTGAAGACTGCGTTATTTCCAATTGTTTTCTGATTTATGATTACGTTAATTGAAGCAGAATATATTGAATATATGGGGATATATTCATTATATTAATATAAATCTTATATATCTTACTGATAAGTTAAGAGAGTCGTTCATATTTTTATATGGGAATATATATACCCATATATTGTATATATGGGTATATAACTTATATTTGTATTCGTTTTATAGTTACTAGTATATAAGATATGTTAACAATCTCAGTCCATTCAAATATTTGGGTTTCTGGAACTTCTAAAATGATTTGTTGTTTTGGTAATTGCTTGAAGGTGTGCCAATGGTGCTTACATTCATATGCTTTATGAATGTGTCAAGTTGTTGTTATAAAGTGGTTCATTTGGTGATTGGATATTCTTTGATGTAGATTAAATTATAAACATAAATGATTCTGAAGTATTTGTTTGTATATATGGGAATATATTTTGTATGAGGTATAAATTGTATACATAATCGAAGATCGTTTATATGAGGAATATATTTAGTATTTTCCATGGTTTATGTAGGTATATATTTGTTTGATTACATTAACATGGTGAAGTGCAAGGGTGTACCAAAACAGAAAGAAATAAGAAGAAGTAATAGGTTAATGAACCAATCTGGCAGCAAGAAGAACAAAGAACCTTTATATGTTAAACTTAGCGAAGAGGTATGCAATACTGCTTATTATATTATTTCGAAGAATTATGTAGGTTGCAATATTTTGACAATTTTCAATCGGTGTGCTCTTAGGAGAGCACTGAGGAAGAAAAGAATGTAAAGGAAGCTCAAACATCGAAGTCGGCATTTTACAATAATTTGTTTGGTAATATGCCACGTTATGCTAAATACTCGAAAATATTCATTTCACCTAAACGAGAGGACATAATTGAGAGTGAAGTTAGTAGATGCGAACCTACAGTTGAGTTTCCAAGTGAAGAAGAAGAAGTCGTGGGAACTCAAATAGTTCCTGTTGTGGTAATACATATGGATATTTTTTATATTCACTCTTTGAAAAGATACACAATCGTTAACCATTATATGCATATATGTATATGATATTTACAGGTGCGTGCCGATCAACCTCGTATTGAGGAAATAACAGAGGAAAAAGTAATACTAGATAGTGTGGATGATAGAAAAGGGAAGAGGAAAGAGAGAGAAGAATTTGAGGTATTGAAGCATTATTATTAGTCCTATCTTTTCAAATAACATTCTAATTTGAATTTTGAAAAATGCAGGAGGACGAAATCTCAATAATTGAAAGATTGGAAAAATTGAAAAGGGGTGTGGGAAGAGCAAAGAACGTGTCGGGAATTAAGGGGAAGAAGAAAAAAGATGATACGATCAAAGAAAAGGTGATTATGGTAATTTTGAAATGCTTCTACGTCTAAATTTTTTTTCTTATGGATATTGATTATATTAATCTTGATTGAATTACAGAATGAAGTGTGGATGCAAGGATAAAAGGAAAAAAGAGAGATATGATAAAGGTAAATGTCATTTTATGCTATGATTCAGTATATTGTCAAGGAGTCGAAATATGTGATCTTATTTGTTATAAATTGAATCGTGCAGGACAAGGAGAACATCTCTAAAAATGATATTATATCGGAGAATGGAGACATGTACATCTATGATGTAAGTATTCGAATTAAGATCGTTGATAACTAATATGCTATTAGATGCCAATGAATATGCCGTTGGATGTATTGGTCTGTTCAATGTAAAGGGATATTGTTGTATATAATATATAGAATATTCTTAAATAGTGTCAACCAAGTTGCTGATGCATAATGCTTGCTCTGGTTCTATCATTGCTGCATATAAAGTTATGTTATATGTATATACAAATATTTTGATGTGCAGTTGAGAGGAACAGGTCCGTTCAAGAAAGGGGAGAATGGAAAAATGATTCCAATATTGAAAGATCAGGAAGTTGAACCATTGAGACGAACAAAACGTAGAGTGGTGATGCCTTCTAAGGTTCATAGATCACCATACACTACAAAGTTTGGTTCAGCTGAAGATCATAAATCAAAGCTATCAAGCATTGAAGATTTTGATGCTCCAACTTTCAACCTGTTATCACAACTTTGA

mRNA sequence

ATGCGCAGCGCTGGAAAATGCAAAGTCATTCCATTTCCATTAGCGTTACGCGACGCGTCGGGGGTTTGGCCAGGCGTTGGCCCGAATTTGGCGGCAAAATTCTATGGGTTGTGTAACCGTTCGTCGGTCGTCGTCTTCCTTGTCCGCCGTGACTGTTCCGGTCTGACTTCGCCGCGTTCGTCGGAAGCTGTATCGGTAAGTTTCCAGCCGTCGTCTTTGCTTTGTCTGCTTCAATTTCCGTCTGCACAATTCGTCTGTGTACTTCCGTCATTGTTGAAATGCTTCAGTTATATCCCATTTGCCGTATTCGTAGGTATATATTTGTTTGATTACATTAACATGGTGAAGTGCAAGGGTGTACCAAAACAGAAAGAAATAAGAAGAAGTAATAGGTTAATGAACCAATCTGGCAGCAAGAAGAACAAAGAACCTTTATATGTTAAACTTAGCGAAGAGGAGAGCACTGAGGAAGAAAAGAATGTAAAGGAAGCTCAAACATCGAAGTCGGCATTTTACAATAATTTGTTTGGTAATATGCCACGTTATGCTAAATACTCGAAAATATTCATTTCACCTAAACGAGAGGACATAATTGAGAGTGAAGTTAGTAGATGCGAACCTACAGTTGAGTTTCCAAGTGAAGAAGAAGAAGTCGTGGGAACTCAAATAGTTCCTGTTGTGGAGGACGAAATCTCAATAATTGAAAGATTGGAAAAATTGAAAAGGGGTGTGGGAAGAGCAAAGAACGTGTCGGGAATTAAGGGGAAGAAGAAAAAAGATGATACGATCAAAGAAAAGGTGATTATGGACAAGGAGAACATCTCTAAAAATGATATTATATCGGAGAATGGAGACATGTACATCTATGATTTGAGAGGAACAGGTCCGTTCAAGAAAGGGGAGAATGGAAAAATGATTCCAATATTGAAAGATCAGGAAGTTGAACCATTGAGACGAACAAAACGTAGAGTGGTGATGCCTTCTAAGGTTCATAGATCACCATACACTACAAAGTTTGGTTCAGCTGAAGATCATAAATCAAAGCTATCAAGCATTGAAGATTTTGATGCTCCAACTTTCAACCTGTTATCACAACTTTGA

Coding sequence (CDS)

ATGCGCAGCGCTGGAAAATGCAAAGTCATTCCATTTCCATTAGCGTTACGCGACGCGTCGGGGGTTTGGCCAGGCGTTGGCCCGAATTTGGCGGCAAAATTCTATGGGTTGTGTAACCGTTCGTCGGTCGTCGTCTTCCTTGTCCGCCGTGACTGTTCCGGTCTGACTTCGCCGCGTTCGTCGGAAGCTGTATCGGTAAGTTTCCAGCCGTCGTCTTTGCTTTGTCTGCTTCAATTTCCGTCTGCACAATTCGTCTGTGTACTTCCGTCATTGTTGAAATGCTTCAGTTATATCCCATTTGCCGTATTCGTAGGTATATATTTGTTTGATTACATTAACATGGTGAAGTGCAAGGGTGTACCAAAACAGAAAGAAATAAGAAGAAGTAATAGGTTAATGAACCAATCTGGCAGCAAGAAGAACAAAGAACCTTTATATGTTAAACTTAGCGAAGAGGAGAGCACTGAGGAAGAAAAGAATGTAAAGGAAGCTCAAACATCGAAGTCGGCATTTTACAATAATTTGTTTGGTAATATGCCACGTTATGCTAAATACTCGAAAATATTCATTTCACCTAAACGAGAGGACATAATTGAGAGTGAAGTTAGTAGATGCGAACCTACAGTTGAGTTTCCAAGTGAAGAAGAAGAAGTCGTGGGAACTCAAATAGTTCCTGTTGTGGAGGACGAAATCTCAATAATTGAAAGATTGGAAAAATTGAAAAGGGGTGTGGGAAGAGCAAAGAACGTGTCGGGAATTAAGGGGAAGAAGAAAAAAGATGATACGATCAAAGAAAAGGTGATTATGGACAAGGAGAACATCTCTAAAAATGATATTATATCGGAGAATGGAGACATGTACATCTATGATTTGAGAGGAACAGGTCCGTTCAAGAAAGGGGAGAATGGAAAAATGATTCCAATATTGAAAGATCAGGAAGTTGAACCATTGAGACGAACAAAACGTAGAGTGGTGATGCCTTCTAAGGTTCATAGATCACCATACACTACAAAGTTTGGTTCAGCTGAAGATCATAAATCAAAGCTATCAAGCATTGAAGATTTTGATGCTCCAACTTTCAACCTGTTATCACAACTTTGA

Protein sequence

MRSAGKCKVIPFPLALRDASGVWPGVGPNLAAKFYGLCNRSSVVVFLVRRDCSGLTSPRSSEAVSVSFQPSSLLCLLQFPSAQFVCVLPSLLKCFSYIPFAVFVGIYLFDYINMVKCKGVPKQKEIRRSNRLMNQSGSKKNKEPLYVKLSEEESTEEEKNVKEAQTSKSAFYNNLFGNMPRYAKYSKIFISPKREDIIESEVSRCEPTVEFPSEEEEVVGTQIVPVVEDEISIIERLEKLKRGVGRAKNVSGIKGKKKKDDTIKEKVIMDKENISKNDIISENGDMYIYDLRGTGPFKKGENGKMIPILKDQEVEPLRRTKRRVVMPSKVHRSPYTTKFGSAEDHKSKLSSIEDFDAPTFNLLSQL

Homology

[Close]

BLAST of Moc06g06490 vs. NCBI nr
Match: XP_022158806.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-37
Identity = 91/124 (73.39%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 153 ESTEEEKNVKEAQTSKSAFYNNLFGNMPRYAKYSKIFISPKREDIIESEVSRCEPTVEFP 212
           ES EEEK   +AQTSK AFYNNLFGNMPRY KYS I ISP++EDIIE++V+RCEPTVEFP
Sbjct: 721 ESAEEEKKGNDAQTSKPAFYNNLFGNMPRYEKYSPIIISPEQEDIIETQVTRCEPTVEFP 780

Query: 213 SEEEEVVGTQIVPVVEDEISIIERLEKLKRGVGRAKNVSGIKGKKKKDDTIKEKVIMDKE 272
           + E+EV+GTQ+VP+VEDEI IIERLE LKRGVGR KNVS IKGKKK DDTIKEK    K+
Sbjct: 781 N-EDEVIGTQVVPLVEDEIPIIERLENLKRGVGRVKNVSEIKGKKKTDDTIKEKKFGRKD 840

Query: 273 NISK 277
              K
Sbjct: 841 KRKK 843

[Close]

BLAST of Moc06g06490 vs. ExPASy TrEMBL
Match: A0A6J1E220 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 OS=Momordica charantia OX=3673 GN=LOC111025272 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-37
Identity = 91/124 (73.39%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 153 ESTEEEKNVKEAQTSKSAFYNNLFGNMPRYAKYSKIFISPKREDIIESEVSRCEPTVEFP 212
           ES EEEK   +AQTSK AFYNNLFGNMPRY KYS I ISP++EDIIE++V+RCEPTVEFP
Sbjct: 721 ESAEEEKKGNDAQTSKPAFYNNLFGNMPRYEKYSPIIISPEQEDIIETQVTRCEPTVEFP 780

Query: 213 SEEEEVVGTQIVPVVEDEISIIERLEKLKRGVGRAKNVSGIKGKKKKDDTIKEKVIMDKE 272
           + E+EV+GTQ+VP+VEDEI IIERLE LKRGVGR KNVS IKGKKK DDTIKEK    K+
Sbjct: 781 N-EDEVIGTQVVPLVEDEIPIIERLENLKRGVGRVKNVSEIKGKKKTDDTIKEKKFGRKD 840

Query: 273 NISK 277
              K
Sbjct: 841 KRKK 843

The following BLAST results are available for this feature:

BLAST of Moc06g06490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158806.1	2.7e-37	73.39	LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 [Momordica charantia]	[more]

BLAST of Moc06g06490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g06490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E220	1.3e-37	73.39	LOW QUALITY PROTEIN: uncharacterized protein LOC111025272 OS=Momordica charantia...	[more]

BLAST of Moc06g06490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 147..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g06490.1	Moc06g06490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity