Moc05g26680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g26680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr5: 19195044 .. 19195937 (+)
RNA-Seq Expression	Moc05g26680
Synteny	Moc05g26680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAATTCTATTATTTCCTTGCTTCTCGTCGGAAAGTTAACTGGGGAGAATTATACAACTTGGAAAACCAATTTGAATACTATACTTGTGGTGGATGACCCAAAATTTGTCTTGACTGAGGAGTGTCCTGAGGTTCGTGGCTCGAATGCGTCACGAAACGTTCGTGATGCATATGACAGATGGACGAAGGCCAATGATAAGGCCCGAGTCTATATCTTGGCCAGCATAATTGACGTTTTGGCTAAGAAACATGAGAACGTGATTATTGCACGCAAGATCATGGATTCATTACGTGAGATGCTTAGGCAATAATCCATACAGATCAGGCATGATGCTCTCAAGTTCATCTTTAATGCACCAATAAAGGAAGGAACTTTTATACGGGAACATGTTCTCGGCATGATTGTCCACTTCAACGTGGCATGGATGAACGATGTTGTCATTAACGAGTCCAGTCGAGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTTCGTTGCAATTCTGTTGTGAACAAAATTGACTACAACCTTACCACTCTCATAAATGAACTCCAGACTTATTAGTCTCTACTGAGAAATAAGGGATAGAAAGAGGAGGCAAATGTTGTCACATCTAACAAGAATTTCCACAGAGGTTCGATCTCTGAGACTAAGTCTGGATCTTCTTCTTCTGGCACTAAAAACTTTAAGAAGAATAAGGGTGGAAAGGGAAAGAAGGCCAAGGTTGCTGACAAAGGAAAATGTTTTCACTGCAACGTTCATGAACACTGGAAGAGGAACGACCTAAAGTACTTGATTGAGAAAAAAGAAGCCAAAGAAGGTAAATACGATTTACTTGTCTTGGAGGCCTGTTTAGTGGAGGATGATGATTCTACCTAG

mRNA sequence

ATGTCTAATTCTATTATTTCCTTGCTTCTCGTCGGAAAGTTAACTGGGGAGAATTATACAACTTGGAAAACCAATTTGAATACTATACTTGTGGTGGATGACCCAAAATTTGTCTTGACTGAGGAGTGTCCTGAGGTTCGTGGCTCGAATGCGTCACGAAACGTTCGTGATGCATATGACAGATGGACGAAGGCCAATGATAAGGCCCGAGTCTATATCTTGGCCAGCATAATTGACGTTTTGGCTAAGAAACATGAGAACGTGATTATTGCACGCAAGATCATGGATTCATTACGAACTTTTATACGGGAACATGTTCTCGGCATGATTGTCCACTTCAACGTGGCATGGATGAACGATGTTGTCATTAACGAGTCCAGTCGAGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTTCGTTGCAATTCTGTTAAAGAGGAGGCAAATGTTGTCACATCTAACAAGAATTTCCACAGAGGTTCGATCTCTGAGACTAAGTCTGGATCTTCTTCTTCTGGCACTAAAAACTTTAAGAAGAATAAGGGTGGAAAGGGAAAGAAGGCCAAGGTTGCTGACAAAGGAAAATGTTTTCACTGCAACGTTCATGAACACTGGAAGAGGAACGACCTAAAGTACTTGATTGAGAAAAAAGAAGCCAAAGAAGGTAAATACGATTTACTTGTCTTGGAGGCCTGTTTAGTGGAGGATGATGATTCTACCTAG

Coding sequence (CDS)

ATGTCTAATTCTATTATTTCCTTGCTTCTCGTCGGAAAGTTAACTGGGGAGAATTATACAACTTGGAAAACCAATTTGAATACTATACTTGTGGTGGATGACCCAAAATTTGTCTTGACTGAGGAGTGTCCTGAGGTTCGTGGCTCGAATGCGTCACGAAACGTTCGTGATGCATATGACAGATGGACGAAGGCCAATGATAAGGCCCGAGTCTATATCTTGGCCAGCATAATTGACGTTTTGGCTAAGAAACATGAGAACGTGATTATTGCACGCAAGATCATGGATTCATTACGAACTTTTATACGGGAACATGTTCTCGGCATGATTGTCCACTTCAACGTGGCATGGATGAACGATGTTGTCATTAACGAGTCCAGTCGAGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTTCGTTGCAATTCTGTTAAAGAGGAGGCAAATGTTGTCACATCTAACAAGAATTTCCACAGAGGTTCGATCTCTGAGACTAAGTCTGGATCTTCTTCTTCTGGCACTAAAAACTTTAAGAAGAATAAGGGTGGAAAGGGAAAGAAGGCCAAGGTTGCTGACAAAGGAAAATGTTTTCACTGCAACGTTCATGAACACTGGAAGAGGAACGACCTAAAGTACTTGATTGAGAAAAAAGAAGCCAAAGAAGGTAAATACGATTTACTTGTCTTGGAGGCCTGTTTAGTGGAGGATGATGATTCTACCTAG

Protein sequence

MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYDRWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTFIREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSVKEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGGKGKKAKVADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACLVEDDDST

Homology

[Close]

BLAST of Moc05g26680 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.3e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.3e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.3e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.3e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

[Close]

BLAST of Moc05g26680 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.3e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MSNSIISLLLVGKLTGENYTTWKTNLNTILVVDDPKFVLTEECPEVRGSNASRNVRDAYD 60
           M+++ +++L   KL G NY +WK  +NT+L++DD +FVL EECP+V  +NA+R VR+ Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWTKANDKARVYILASIIDVLAKKHENVIIARKIMDSLRTF------------------- 120
           RW KAN+KAR YILAS+ +VLAKKHE+++ AR+IMDSL+                     
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 -------IREHVLGMIVHFNVAWMNDVVINESSRVSFILESLPKSFLQFRCNSV------ 180
                  +REHVL M+VHFNVA MN  VI+E+S+VSFILESLP+SFLQFR N+V      
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 ---------------------KEEANVVTSNKNFHRGSISETKSGSSSSGTKNFKKNKGG 240
                                K EANV TS + FHRGS S TKS  SSSG K +KK KGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241 KGKKAKV----------ADKGKCFHCNVHEHWKRNDLKYLIEKKEAKEGKYDLLVLEACL 244
           +G KA +          A KG CFHCN   HWKRN  KYL EKK+AK+GKYDLLVLE CL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

The following BLAST results are available for this feature:

BLAST of Moc05g26680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	4.7e-70	50.98	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	4.7e-70	50.98	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	4.7e-70	50.98	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	4.7e-70	50.98	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0047792.1	4.7e-70	50.98	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc05g26680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g26680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	2.3e-70	50.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	2.3e-70	50.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	2.3e-70	50.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	2.3e-70	50.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	2.3e-70	50.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Moc05g26680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..182
None	No IPR available	PANTHER	PTHR35317:SF16	ZINC FINGER, CCHC-TYPE-RELATED	coord: 5..101
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 5..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g26680.1	Moc05g26680.1	mRNA