Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAAGAGTTCATGACAAGAATGGATGATGTGATAAGAAGCTTGGAGATGCAAGTGGGGCAGATTGCAAATGACCTAAAATCTAGACCCCAAGGTACATTACCTGGACATATAGAAAACCCGAAGCGAGATCGTGAGGGAAAGGATCACTGTAAGGCGGTTATCACGAGAAGCAGACTAAGTTATGATGGACCCTCACTTCCAGACGAAGGAACTGATGTAGTTACACCTGTTCCTGCATCCACCTCCAATCCAGAACAAGAAGAGAAAGCAGAACCCGTAAGTTCAGAAGAAAAAGGTAAGAAGGCGGATAAAGGTAAGTAAATAGTGCCCAGCACTACTCCACAGGTAGGTTATATTAAGATTCCTCTACCTTTCTCCCAAAGGCTAGTTAAAAAGAATCAGGATAGTCATTTTAAGAAGTTCTTTGAGATTCTAAAACAGTTGCATATAAAATATACCTCTCATAAATGCTTTAAAACAAATGCCTAACTACACTAAGTTTTTAAGAGACATCATATCTAGGCGTAAGAAGTTAGGTGAGCCTGAGACGGTAGCTTTGACAAAATGTGGTAGTGATGTTCTAGGGAATCCATTGCCTGTTAAATGTAAGGACCCAGGTAGTTTCACTATTCCTTGCTCAATAGGAGGGAAGAACCTAGGAAGAGCATTGTGTGACTTAGGAGCAAGCATTAATCTTATGCCTCTTTATGTATTTAAAGAGTTAAATATAGGAGAAGCTCGTCCCACTACTGTCACTTTACAACTAGCTGATAGATCCATAAAGAACCGGAAGGAAAAATAGAATATGTGCTTGTTAAAGTTGATAAGTTTATTTTTCCCGCCGATTTCATAATTTTGGACTGTGAGCAGATCTTGAGGTGCCGATCATTCTTGGGAGGCCAATTTTAGCAACTGGAGATACGGTTTTCAATGTTAGGAAAGGAGAGATCACGATGAAGGTCAATGATCAGCAGGTAACCTTCAATGTCCTCGATGCGATGTGTCTCCCGGATGAAGTCGAAGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCAAATGATGGTGGAAAACTTCAAAGCAGATTTGGAGGCCGCAGAAAAAGAATCCAAAATTGTGCCTTTTGCCCCAATTTGA
mRNA sequence
ATGATGAAAGAGTTCATGACAAGAATGGATGATGTGATAAGAAGCTTGGAGATGCAAGTGGGGCAGATTGCAAATGACCTAAAATCTAGACCCCAAGGTACATTACCTGGACATATAGAAAACCCGAAGCGAGATCGTGAGGGAAAGGATCACTGTAAGGCGGTTATCACGAGAAGCAGACTAAGTTATGATGGACCCTCACTTCCAGACGAAGGAACTGATGTAGTTACACCTGTTCCTGCATCCACCTCCAATCCAGAACAAGAAGAGAAAGCAGAACCCGTAAGTTCAGAAGAAAAAGGTAAGAAGGCGGATAAAGGAGAGATCACGATGAAGGTCAATGATCAGCAGGTAACCTTCAATGTCCTCGATGCGATGTGTCTCCCGGATGAAGTCGAAGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCAAATGATGGTGGAAAACTTCAAAGCAGATTTGGAGGCCGCAGAAAAAGAATCCAAAATTGTGCCTTTTGCCCCAATTTGA
Coding sequence (CDS)
ATGATGAAAGAGTTCATGACAAGAATGGATGATGTGATAAGAAGCTTGGAGATGCAAGTGGGGCAGATTGCAAATGACCTAAAATCTAGACCCCAAGGTACATTACCTGGACATATAGAAAACCCGAAGCGAGATCGTGAGGGAAAGGATCACTGTAAGGCGGTTATCACGAGAAGCAGACTAAGTTATGATGGACCCTCACTTCCAGACGAAGGAACTGATGTAGTTACACCTGTTCCTGCATCCACCTCCAATCCAGAACAAGAAGAGAAAGCAGAACCCGTAAGTTCAGAAGAAAAAGGTAAGAAGGCGGATAAAGGAGAGATCACGATGAAGGTCAATGATCAGCAGGTAACCTTCAATGTCCTCGATGCGATGTGTCTCCCGGATGAAGTCGAAGAGTGCTCTACAATAGGGGCAATCATGGAGGAACTCCAGCAAATGATGGTGGAAAACTTCAAAGCAGATTTGGAGGCCGCAGAAAAAGAATCCAAAATTGTGCCTTTTGCCCCAATTTGA
Protein sequence
MMKEFMTRMDDVIRSLEMQVGQIANDLKSRPQGTLPGHIENPKRDREGKDHCKAVITRSRLSYDGPSLPDEGTDVVTPVPASTSNPEQEEKAEPVSSEEKGKKADKGEITMKVNDQQVTFNVLDAMCLPDEVEECSTIGAIMEELQQMMVENFKADLEAAEKESKIVPFAPI
Homology
BLAST of Moc05g16020 vs. NCBI nr
Match:
XP_022150857.1 (uncharacterized protein LOC111018901 [Momordica charantia])
HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0
Query: 106 KGEITMKVNDQQVTFNVLDAMCLPDEVEECSTIGAIMEELQQMMVENFKADLEAAEKESK 165
KGEITMKVND+QVTFNVLDAM LPD+VEECSTIGAIMEELQQM+VE+ +ADLE AEKES
Sbjct: 146 KGEITMKVNDEQVTFNVLDAMRLPDDVEECSTIGAIMEELQQMIVEDLEADLEVAEKEST 205
Query: 166 IV 168
+
Sbjct: 206 AI 207
BLAST of Moc05g16020 vs. NCBI nr
Match:
XP_022143639.1 (uncharacterized protein LOC111013500 [Momordica charantia])
HSP 1 Score: 93.2 bits (230), Expect = 2.3e-15
Identity = 45/62 (72.58%), Postives = 55/62 (88.71%), Query Frame = 0
Query: 106 KGEITMKVNDQQVTFNVLDAMCLPDEVEECSTIGAIMEELQQMMVENFKADLEAAEKESK 165
KG ITMKVND+Q+TFNVLD LPDEVE+CS IGAIMEELQ+M+VE+ +ADLEAAEKE+
Sbjct: 132 KGNITMKVNDEQITFNVLDVRRLPDEVEDCSAIGAIMEELQEMIVEDLEADLEAAEKEAG 191
Query: 166 IV 168
++
Sbjct: 192 VI 193
BLAST of Moc05g16020 vs. NCBI nr
Match:
XP_022150097.1 (uncharacterized protein LOC111018357 [Momordica charantia])
HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 79/264 (29.92%), Postives = 103/264 (39.02%), Query Frame = 0
Query: 20 VGQIANDLKSRPQGTLPGHIENPKRDREGKDHCKAVITRSRLSYDGPSLPDE-------- 79
+GQ+ N+LKSR TLP E PK REGK+HCKA+ T+SRL+Y+ P +P E
Sbjct: 1 MGQLTNELKSRSSDTLPSITEEPK--REGKEHCKAITTQSRLAYEEPKMPGEQASSPSKE 60
Query: 80 ---GTDVVTPVPASTSNPEQEE-------------------------------------- 139
T+ PV S P ++
Sbjct: 61 KETATEPDQPVEIEVSRPMAQQDIISRRKKLGEHETVALTKCSSDALGNPLPIKCKDPGI 120
Query: 140 -------KAEPVS----------SEEKGKKAD---------------------------- 170
KA P + + +GK D
Sbjct: 121 FKELNIGKARPTTVTLQFADRSIRKLEGKIEDVLIKVDKLTFPADFIILDCEVDLDIPII 180
BLAST of Moc05g16020 vs. NCBI nr
Match:
XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])
HSP 1 Score: 82.8 bits (203), Expect = 3.2e-12
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 1 MMKEFMTRMDDVI-------RSLEMQVGQIANDLKSRPQGTLPGHIENPKRDREGKDHCK 60
MMKE+M R D VI R+ Q+G +AN+LK+RPQG+ PGH E P+ REGK+ CK
Sbjct: 437 MMKEYMARTDAVIQSQAASMRNFGTQLGHLANELKNRPQGSFPGHTELPR--REGKEQCK 496
Query: 61 AVITRSRLSYDGPSLPDEGTDVVTP-------VPASTSNPEQE 90
AV RS L+YDGP++P TDV P +P + + PE+E
Sbjct: 497 AVTLRSGLTYDGPTMPT--TDVQIPSTKPTVKIPENPTTPEKE 535
BLAST of Moc05g16020 vs. NCBI nr
Match:
XP_022159235.1 (uncharacterized protein LOC111025653 [Momordica charantia])
HSP 1 Score: 78.2 bits (191), Expect = 7.8e-11
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 2 MKEFMTRMDDVIRSLEMQVGQIANDLKSRPQGTLPGHIENPKRDREGKDHCKAVITRSRL 61
+K++M R D +R LEMQ+GQ+ N++++RPQG+LP E P+ R GK+HC ++ TRS L
Sbjct: 428 VKDYMGRNDVTVRKLEMQLGQLVNEVRTRPQGSLPSSTEEPR--RIGKEHCNSIATRSGL 487
Query: 62 SYDGPSLPDEGTDVVTPVPASTSNPEQEEKAEPV 96
Y+GP +PDE S+ +P +E+ + V
Sbjct: 488 KYEGPRMPDE----------SSHSPSREKDTQAV 509
BLAST of Moc05g16020 vs. ExPASy TrEMBL
Match:
A0A6J1DBX0 (uncharacterized protein LOC111018901 OS=Momordica charantia OX=3673 GN=LOC111018901 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0
Query: 106 KGEITMKVNDQQVTFNVLDAMCLPDEVEECSTIGAIMEELQQMMVENFKADLEAAEKESK 165
KGEITMKVND+QVTFNVLDAM LPD+VEECSTIGAIMEELQQM+VE+ +ADLE AEKES
Sbjct: 146 KGEITMKVNDEQVTFNVLDAMRLPDDVEECSTIGAIMEELQQMIVEDLEADLEVAEKEST 205
Query: 166 IV 168
+
Sbjct: 206 AI 207
BLAST of Moc05g16020 vs. ExPASy TrEMBL
Match:
A0A6J1CPX1 (uncharacterized protein LOC111013500 OS=Momordica charantia OX=3673 GN=LOC111013500 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 45/62 (72.58%), Postives = 55/62 (88.71%), Query Frame = 0
Query: 106 KGEITMKVNDQQVTFNVLDAMCLPDEVEECSTIGAIMEELQQMMVENFKADLEAAEKESK 165
KG ITMKVND+Q+TFNVLD LPDEVE+CS IGAIMEELQ+M+VE+ +ADLEAAEKE+
Sbjct: 132 KGNITMKVNDEQITFNVLDVRRLPDEVEDCSAIGAIMEELQEMIVEDLEADLEAAEKEAG 191
Query: 166 IV 168
++
Sbjct: 192 VI 193
BLAST of Moc05g16020 vs. ExPASy TrEMBL
Match:
A0A6J1D9S6 (uncharacterized protein LOC111018357 OS=Momordica charantia OX=3673 GN=LOC111018357 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 79/264 (29.92%), Postives = 103/264 (39.02%), Query Frame = 0
Query: 20 VGQIANDLKSRPQGTLPGHIENPKRDREGKDHCKAVITRSRLSYDGPSLPDE-------- 79
+GQ+ N+LKSR TLP E PK REGK+HCKA+ T+SRL+Y+ P +P E
Sbjct: 1 MGQLTNELKSRSSDTLPSITEEPK--REGKEHCKAITTQSRLAYEEPKMPGEQASSPSKE 60
Query: 80 ---GTDVVTPVPASTSNPEQEE-------------------------------------- 139
T+ PV S P ++
Sbjct: 61 KETATEPDQPVEIEVSRPMAQQDIISRRKKLGEHETVALTKCSSDALGNPLPIKCKDPGI 120
Query: 140 -------KAEPVS----------SEEKGKKAD---------------------------- 170
KA P + + +GK D
Sbjct: 121 FKELNIGKARPTTVTLQFADRSIRKLEGKIEDVLIKVDKLTFPADFIILDCEVDLDIPII 180
BLAST of Moc05g16020 vs. ExPASy TrEMBL
Match:
A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 1 MMKEFMTRMDDVI-------RSLEMQVGQIANDLKSRPQGTLPGHIENPKRDREGKDHCK 60
MMKE+M R D VI R+ Q+G +AN+LK+RPQG+ PGH E P+ REGK+ CK
Sbjct: 437 MMKEYMARTDAVIQSQAASMRNFGTQLGHLANELKNRPQGSFPGHTELPR--REGKEQCK 496
Query: 61 AVITRSRLSYDGPSLPDEGTDVVTP-------VPASTSNPEQE 90
AV RS L+YDGP++P TDV P +P + + PE+E
Sbjct: 497 AVTLRSGLTYDGPTMPT--TDVQIPSTKPTVKIPENPTTPEKE 535
BLAST of Moc05g16020 vs. ExPASy TrEMBL
Match:
A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 3.8e-11
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 2 MKEFMTRMDDVIRSLEMQVGQIANDLKSRPQGTLPGHIENPKRDREGKDHCKAVITRSRL 61
+K++M R D +R LEMQ+GQ+ N++++RPQG+LP E P+ R GK+HC ++ TRS L
Sbjct: 428 VKDYMGRNDVTVRKLEMQLGQLVNEVRTRPQGSLPSSTEEPR--RIGKEHCNSIATRSGL 487
Query: 62 SYDGPSLPDEGTDVVTPVPASTSNPEQEEKAEPV 96
Y+GP +PDE S+ +P +E+ + V
Sbjct: 488 KYEGPRMPDE----------SSHSPSREKDTQAV 509
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150857.1 | 1.1e-17 | 82.26 | uncharacterized protein LOC111018901 [Momordica charantia] | [more] |
XP_022143639.1 | 2.3e-15 | 72.58 | uncharacterized protein LOC111013500 [Momordica charantia] | [more] |
XP_022150097.1 | 1.1e-12 | 29.92 | uncharacterized protein LOC111018357 [Momordica charantia] | [more] |
XP_022158408.1 | 3.2e-12 | 47.57 | uncharacterized protein LOC111024897, partial [Momordica charantia] | [more] |
XP_022159235.1 | 7.8e-11 | 41.49 | uncharacterized protein LOC111025653 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DBX0 | 5.4e-18 | 82.26 | uncharacterized protein LOC111018901 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1CPX1 | 1.1e-15 | 72.58 | uncharacterized protein LOC111013500 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1D9S6 | 5.3e-13 | 29.92 | uncharacterized protein LOC111018357 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DW02 | 1.5e-12 | 47.57 | uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DY39 | 3.8e-11 | 41.49 | uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Pages
Match Name | E-value | Identity | Description | |