Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTCTTTATGAGTCCAGTGAAGATTGACATGGAGAAATTTGACGGAAGGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCTGAAAAGCTAAGCGTGTTGGGTTTTATGTCCTGAAACTCATAGTTTGAAAATGTCAGATATACTTTTATCTTTCAATAAAGTTGTTATTGAAGGTTTCAATAAGTAGTTATTGATCCAATAAAATGTTCTTACTAGATCTAAATCCAATAAAATAAAGGATCCTAGACTGTTACCTGAGACTCAAACTCTATGTAAGATCCATAAATATGGATCAAGTTTGAGTTAACAGTCTAAATGGTCTATAGTATAGGAATAAGGTTGGGCGCCTTATTCTGGGGACACTATGGATGCGGTCCACTTTGTAGCTAGTACAAATGATGTGATCCTAATTCGTTCATGTGAAGACATGCGAGTGGGGGTGTCCCGTGCAAAGAGTTTGCATAAGACCGGACCATGAGATAGTCACTTTTACTTTATAACACCGTTTACTATTTGAAACTGACTATCTCGACTTTGATGGCCTAGGTAACTCGATCTTAATCCTGAGCTAATTATGAACTTCTGTTTACTCAGGATTACCCTTAGATCTGCATGGGTGAGAGCAGCTCAACAGCGCTGGCTCAATAAGCCTCCCATTTCAGGGGTAAGGCCCGGTAGATAGCTAGGGAGATAGGGTGCAAGAAGGAATTCACTTCTACCCAATTTTAGGATAGTAGAAAGGTTGTTCTCTTAAGGGCTGAATCCAGGTCTTGAACAATAGGCGCCACCCTCATCAAAAGGTTTGAGAGGATTTTTGATTTTATAGTTGGACTACAAATCATTGTTCATTAGAGGATCAGTGGGACTTAAGGAACAAGAGGTAGCGGTATTTTGACCTAGCTGTAATTACGAACAACTTGTGAAGGGTCGACTTACCGATCATGGTTATATCAAATGGACATAATATATCTACAGTGAAGAGAGTGCAGCTATGGGCTTTAGTGGAGTGACCCGATAGTTAACGAATGTTGGTTAACTAGGTTAAAGAGTTTAACCGGTTAATCTCGGATCGTTGGAGCTCATAATCTGTAGGTCCATAAGATCCTCTAGCTAGCTCATATAGGAATAAACTTGGAATAATTCGAATCGTACGAATTAGGTTAATCATATGAGATATGATTAAGTAATTGATATATGATATCAATTTGAGAAATTTGGACAAAATATTTAAATATGATTTAAATATTAAAATTATGAATGTGGATTCATAATCGGAGACATGGATTTCATCAAACATCGGATTTTGGAAAAAGTCAAATAGTTGACTTTGACCAGAGAAAGTCAAAGGTTGACTAAAGTAGATTAAAATAATGTTTTTAACCAAGTTGGTGGAAAATTCCACTAACTTGTTGAGTGGAACATTTAAATAATCTCAAAAATCCACTTTTTGACACTTAGCCATGCATGCATAAGTGGAATGTATGTTATAAACTTTTGGTGAATTTAGACATGCATTTTGACACTTAGCCATGCCATGCATGAGTGGAATGTGTGTTGTAAGCTTTTGGTGAACTTAGACATGCATTTTGACACTTAGTCATGCCATGCATAAGTGGAATATGTGTTGTAAGCTTTTGGTGAACTTTGACATGCAAGAGTTGCATGTAATTTGCTTATTTAAGAAGGCCTTTGTTCAAAAATTAAAGGGCTTGGAACCTTTGACTTTTTTTTCCAAAAAAAAAGCTTACATAACTCTTTTTAGCTCCACTTTTCTCTAAATTTTTCCTTCTCTAAAAAGAGTCCCACCACTCTATTCCAAGCCTTGAGAATAGCTAGGAAGATCTCTTGGTTGTTCTTCATTGGAGCTATTTGAAGATTTTTGAAAAGCTACAAAGGTTTGTATTTTTCTCTACTTATCTCTAAGCATCATAATGTATGATCATGCATGTTTAATCTTAGGTTGTATTATGCATCTAGATTGTTATTTCGATTCTTGCTCACTTTCGCTGCGCATGTATGTATATTATCCATCAAAGCGGTGATGATGGTCTAATGGAGTCCAGTGCTGGTTCCAGCAAAGGTTCTAAGAAGTCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCAATACGAACATGTTTGAATAAGAATATTCATGCGAATGTGCATGGAATTCGACAGCTAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATAGAGGAAGGTACGAAAGTTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGCTGGAGGTGATCGAAGTGAAGATAGATGACGGAGATAAAGCTCTCAGGCTCATCTTATCACTTCCACCTTCTTATGAACACATGAAACCGATCTTGATGTATGAGAATGATACTTTGAATTTTACTGAGGTTACTAGTAAACTATTGTCAGAGGAAAGAAGGCCGAATAGTGAAGGGCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAATGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAAAGCCAGTTCGTCAAAGGGCTCTAGGCGGGATGCTGACAGTGTTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA
mRNA sequence
ATGTCATTCTTTATGAGTCCAGTGAAGATTGACATGGAGAAATTTGACGGAAGGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCTGAAAAGCTAAGCGTGATTACCCTTAGATCTGCATGGGTGAGAGCAGCTCAACAGCGCTGGCTCAATAAGCCTCCCATTTCAGGGATTGTTATTTCGATTCTTGCTCACTTTCGCTGCGCATGTATGTATATTATCCATCAAAGCGGTGATGATGGTCTAATGGAGTCCAGTGCTGGTTCCAGCAAAGCTAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATAGAGGAAGGTACGAAAGTTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGCTGGAGGTGATCGAAGTGAAGATAGATGACGGAGATAAAGCTCTCAGGCTCATCTTATCACTTCCACCTTCTTATGAACACATGAAACCGATCTTGATGTATGAGAATGATACTTTGAATTTTACTGAGGTTACTAGTAAACTATTGTCAGAGGAAAGAAGGCCGAATAGTGAAGGGCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAATGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAAAGCCAGTTCGTCAAAGGGCTCTAGGCGGGATGCTGACAGTGTTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA
Coding sequence (CDS)
ATGTCATTCTTTATGAGTCCAGTGAAGATTGACATGGAGAAATTTGACGGAAGGATCAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCTGAAAAGCTAAGCGTGATTACCCTTAGATCTGCATGGGTGAGAGCAGCTCAACAGCGCTGGCTCAATAAGCCTCCCATTTCAGGGATTGTTATTTCGATTCTTGCTCACTTTCGCTGCGCATGTATGTATATTATCCATCAAAGCGGTGATGATGGTCTAATGGAGTCCAGTGCTGGTTCCAGCAAAGCTAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATAGAGGAAGGTACGAAAGTTTCAGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGCTGGAGGTGATCGAAGTGAAGATAGATGACGGAGATAAAGCTCTCAGGCTCATCTTATCACTTCCACCTTCTTATGAACACATGAAACCGATCTTGATGTATGAGAATGATACTTTGAATTTTACTGAGGTTACTAGTAAACTATTGTCAGAGGAAAGAAGGCCGAATAGTGAAGGGCGTACTTCACATGAAGATTCAGCACTGGTAGCTAGCAATTGGAAGAAGAAGAATGACTCCGTACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAACAAAGCCAGTTCGTCAAAGGGCTCTAGGCGGGATGCTGACAGTGTTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA
Protein sequence
MSFFMSPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVITLRSAWVRAAQQRWLNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEALYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLILSLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDSVQKKACCWGCGQSGHMKKDCPNKASSSKGSRRDADSVSLIRGDDDQFL
Homology
BLAST of Moc05g13830 vs. NCBI nr
Match:
XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])
HSP 1 Score: 360.9 bits (925), Expect = 1.0e-95
Identity = 196/267 (73.41%), Postives = 207/267 (77.53%), Query Frame = 0
Query: 1 MSFFMSPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVI--TL 60
MSFFMSPVKID+EKFDG INFGLWQVQVKDVLIQS LHKALKGRPSEGASEKLS +
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354
Query: 61 RSAWVRAAQQRWLNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWE 120
S+ R K S + I S ++ + S AKELWE
Sbjct: 355 ESS---GGSSRGSKK---SSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWE 414
Query: 121 KLEALYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKAL 180
KLEALYQAKGISNRLYLKEQFHTL++EEG K+SDHLSNLNSIIFELE IEVKIDD DKAL
Sbjct: 415 KLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKAL 474
Query: 181 RLILSLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKK 240
RLILSLP SYEHMKPILMY DTLNF EVTSKLLSEERR SEGRTSHEDSALV SNWKK
Sbjct: 475 RLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKK 534
Query: 241 KNDSVQKKACCWGCGQSGHMKKDCPNK 266
K DSVQKKACCWGCGQSGHMKKDCPN+
Sbjct: 535 KKDSVQKKACCWGCGQSGHMKKDCPNR 555
BLAST of Moc05g13830 vs. NCBI nr
Match:
KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])
HSP 1 Score: 265.0 bits (676), Expect = 7.6e-67
Identity = 148/283 (52.30%), Postives = 191/283 (67.49%), Query Frame = 0
Query: 6 SPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVITLRSAWVRA 65
SP++ D+EK+DGRINFGLWQVQVKDVLIQSGLHKAL+G+P+ +S+ S +
Sbjct: 5 SPMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKD------SSGTSKD 64
Query: 66 AQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEAL 125
+ W L+ S I + + + ++ + G S AK+LWEKLE L
Sbjct: 65 DDEEWEDLDLRAASAIRLCLAKN----------------VLANVHGISTAKDLWEKLEQL 124
Query: 126 YQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLILS 185
YQ KGI NRLYLKEQFHTLR++ TK+SDHLS LN+I+ ELE I VK++D DKALRLILS
Sbjct: 125 YQGKGIPNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILS 184
Query: 186 LPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDSV 245
L SYEHMKPILMY +TL + +VT KLLSEE+R S G TS E + L+ N KKK+
Sbjct: 185 LTSSYEHMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP-- 244
Query: 246 QKKACCWGCGQSGHMKKDCPNKASSSKGSRRDADSVSLIRGDD 287
QK CW CGQSGH+K++CP A S+ S + A++V+++ GDD
Sbjct: 245 QKIPVCWKCGQSGHVKRNCPGGADSASSS-KTANNVAVVDGDD 262
BLAST of Moc05g13830 vs. NCBI nr
Match:
KAF5758504.1 (putative RNA-directed DNA polymerase [Helianthus annuus])
HSP 1 Score: 263.5 bits (672), Expect = 2.2e-66
Identity = 148/283 (52.30%), Postives = 191/283 (67.49%), Query Frame = 0
Query: 6 SPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVITLRSAWVRA 65
SP++ +EK+DGRINFGLWQVQVKDVLIQSGLHKAL+G+P+ +S+ S +
Sbjct: 5 SPMRFVVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKD------SSGTSKD 64
Query: 66 AQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEAL 125
+ W L+ S I + + + ++ + G S AK+LWEKLE L
Sbjct: 65 DDEEWEDLDLRAASAIRLCLAKN----------------VLANVHGISTAKDLWEKLEQL 124
Query: 126 YQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLILS 185
YQ KGISNRLYLKEQFHTLR++ TK+SDHLS LN+I+ ELE I VK++D DKALRLILS
Sbjct: 125 YQGKGISNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILS 184
Query: 186 LPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDSV 245
L SYEHMKPILMY +TL + +VT KLLSEE+R S G TS E + L+ N KKK+
Sbjct: 185 LTSSYEHMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP-- 244
Query: 246 QKKACCWGCGQSGHMKKDCPNKASSSKGSRRDADSVSLIRGDD 287
QK CW CGQSGH+K++CP A S+ S + A++V+++ GDD
Sbjct: 245 QKIPVCWKCGQSGHVKRNCPGGADSASNS-KTANNVAVVDGDD 262
BLAST of Moc05g13830 vs. NCBI nr
Match:
KAE8717380.1 (hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus])
HSP 1 Score: 260.8 bits (665), Expect = 1.4e-65
Identity = 148/289 (51.21%), Postives = 192/289 (66.44%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRP---SEGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P SEG +K S + +
Sbjct: 4 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKGKSK 63
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 64 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 123
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V+IDD DKALRLI
Sbjct: 124 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIW 183
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SLP SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 184 SLPSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKG 243
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQFL 291
+KK CWGCGQ GH+KKDC N A+S+ GS+ DA +V + +DD+F+
Sbjct: 244 SKKKIICWGCGQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 276
BLAST of Moc05g13830 vs. NCBI nr
Match:
KAE8682180.1 (Transcription initiation factor IIA subunit 2 [Hibiscus syriacus])
HSP 1 Score: 257.7 bits (657), Expect = 1.2e-64
Identity = 147/289 (50.87%), Postives = 191/289 (66.09%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRP---SEGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P SEG +K S + +
Sbjct: 90 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKGKSK 149
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 150 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 209
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V+IDD DKALRLI
Sbjct: 210 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIW 269
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SL SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 270 SLSSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKG 329
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQFL 291
+KK CWGCGQ GH+KKDC N A+S+ GS+ DA +V + +DD+F+
Sbjct: 330 SKKKIICWGCGQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 362
BLAST of Moc05g13830 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 7.0e-31
Identity = 87/304 (28.62%), Postives = 152/304 (50.00%), Query Frame = 0
Query: 5 MSPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVITLRSAWVR 64
MS VK ++ KF+G F WQ +++D+LIQ GLHK L V + + ++
Sbjct: 1 MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKV------------LDVDSKKPDTMK 60
Query: 65 AAQQRWLNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEALY 124
A L++ S I + + D ++ + A+ +W +LE+LY
Sbjct: 61 AEDWADLDERAASAIRLHL----------------SDDVVNNIIDEDTARGIWTRLESLY 120
Query: 125 QAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLILSL 184
+K ++N+LYLK+Q + L + EGT HL+ N +I +L + VKI++ DKA+ L+ SL
Sbjct: 121 MSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSL 180
Query: 185 PPSYEHMKPILMYENDTLNFTEVTSKLLSEE---RRPNSEGRT------------SHEDS 244
P SY+++ +++ T+ +VTS LL E ++P ++G+ S +
Sbjct: 181 PSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNY 240
Query: 245 ALVASNWKKKNDSVQKKACCWGCGQSGHMKKDCPNK---ASSSKGSRRDADSVSLIRGDD 291
+ K KN S + C+ C Q GH K+DCPN + G + D ++ ++++ +D
Sbjct: 241 GRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNND 276
BLAST of Moc05g13830 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 67.0 bits (162), Expect = 4.0e-10
Identity = 67/280 (23.93%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 5 MSPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKG-RPSEGASEKLSVITLRSAWV 64
M K +++ FDG + +W+ +++ +L + + K + G P+E + +W
Sbjct: 1 MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNE----------VDDSWK 60
Query: 65 RAAQQRWLNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEAL 124
+A RCA II D + + A+++ E L+A+
Sbjct: 61 KAE---------------------RCAKSTIIEYL-SDSFLNFATSDITARQILENLDAV 120
Query: 125 YQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLILS 184
Y+ K ++++L L+++ +L++ + H + +I EL KI++ DK L+++
Sbjct: 121 YERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLIT 180
Query: 185 LPPSYEHM---KPILMYENDTLNFTEVTSKLLSEE-RRPNSEGRTS--------HEDSAL 244
LP Y+ + L EN TL F V ++LL +E + N TS H ++
Sbjct: 181 LPSCYDGIITAIETLSEENLTLAF--VKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNT 240
Query: 245 VASNWKKKNDSVQK---------KACCWGCGQSGHMKKDC 263
+N K + K K C CG+ GH+KKDC
Sbjct: 241 YKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDC 245
BLAST of Moc05g13830 vs. ExPASy TrEMBL
Match:
A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)
HSP 1 Score: 360.9 bits (925), Expect = 4.9e-96
Identity = 196/267 (73.41%), Postives = 207/267 (77.53%), Query Frame = 0
Query: 1 MSFFMSPVKIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPSEGASEKLSVI--TL 60
MSFFMSPVKID+EKFDG INFGLWQVQVKDVLIQS LHKALKGRPSEGASEKLS +
Sbjct: 295 MSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSDDGGPM 354
Query: 61 RSAWVRAAQQRWLNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWE 120
S+ R K S + I S ++ + S AKELWE
Sbjct: 355 ESS---GGSSRGSKK---SSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWE 414
Query: 121 KLEALYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKAL 180
KLEALYQAKGISNRLYLKEQFHTL++EEG K+SDHLSNLNSIIFELE IEVKIDD DKAL
Sbjct: 415 KLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKAL 474
Query: 181 RLILSLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKK 240
RLILSLP SYEHMKPILMY DTLNF EVTSKLLSEERR SEGRTSHEDSALV SNWKK
Sbjct: 475 RLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNWKK 534
Query: 241 KNDSVQKKACCWGCGQSGHMKKDCPNK 266
K DSVQKKACCWGCGQSGHMKKDCPN+
Sbjct: 535 KKDSVQKKACCWGCGQSGHMKKDCPNR 555
BLAST of Moc05g13830 vs. ExPASy TrEMBL
Match:
A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 6.9e-66
Identity = 148/289 (51.21%), Postives = 192/289 (66.44%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRP---SEGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P SEG +K S + +
Sbjct: 4 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKGKSK 63
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 64 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 123
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V+IDD DKALRLI
Sbjct: 124 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIW 183
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SLP SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 184 SLPSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKG 243
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQFL 291
+KK CWGCGQ GH+KKDC N A+S+ GS+ DA +V + +DD+F+
Sbjct: 244 SKKKIICWGCGQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 276
BLAST of Moc05g13830 vs. ExPASy TrEMBL
Match:
A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 5.9e-65
Identity = 147/289 (50.87%), Postives = 190/289 (65.74%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRP---SEGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P SEG +K S + +
Sbjct: 4 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKGKSK 63
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 64 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 123
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V IDD DKALRLI
Sbjct: 124 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIW 183
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SLP SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 184 SLPSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKG 243
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQFL 291
+KK CWGCGQ GH+KKDC N A+ + GS+ DA +V + +DD+F+
Sbjct: 244 SKKKIICWGCGQPGHLKKDCKNGGANLANGSKSDATNVVVFENEDDEFV 276
BLAST of Moc05g13830 vs. ExPASy TrEMBL
Match:
A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 5.9e-65
Identity = 147/289 (50.87%), Postives = 191/289 (66.09%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRP---SEGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P SEG +K S + +
Sbjct: 90 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKGKSK 149
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 150 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 209
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V+IDD DKALRLI
Sbjct: 210 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIW 269
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SL SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 270 SLSSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKG 329
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQFL 291
+KK CWGCGQ GH+KKDC N A+S+ GS+ DA +V + +DD+F+
Sbjct: 330 SKKKIICWGCGQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 362
BLAST of Moc05g13830 vs. ExPASy TrEMBL
Match:
A0A6A3DA47 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000132pilonHSYRG00093 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 7.7e-65
Identity = 146/288 (50.69%), Postives = 191/288 (66.32%), Query Frame = 0
Query: 9 KIDMEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPS---EGAS-EKLSVITLRSAWVR 68
+ D+EKFDGRINFGLWQVQVKD+LIQSGL+KALKG+P+ EG +K S + +
Sbjct: 4 RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLFEGKEPDKPSDSSGDKGKSK 63
Query: 69 AAQQRW--LNKPPISGIVISILAHFRCACMYIIHQSGDDGLMESSAGSSKAKELWEKLEA 128
+++ W L+ S I + + + ++ + A S KELWEKLE
Sbjct: 64 MSEEEWEELDMRAASQIRLCLAKN----------------VLANVARWSSTKELWEKLEE 123
Query: 129 LYQAKGISNRLYLKEQFHTLRIEEGTKVSDHLSNLNSIIFELEVIEVKIDDGDKALRLIL 188
+YQAK +SNRLYLKE+FH L++EEGTK+SDHLS LN I+ ELE I V+IDD DKALRLI
Sbjct: 124 MYQAKSLSNRLYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIW 183
Query: 189 SLPPSYEHMKPILMYENDTLNFTEVTSKLLSEERRPNSEGRTSHEDSALVASNWKKKNDS 248
SLP SYEHM+ +LMY + +NF+EVTSKL+SEERR + S E AL +KK
Sbjct: 184 SLPSSYEHMQTVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVFGNRKKYKG 243
Query: 249 VQKKACCWGCGQSGHMKKDCPN-KASSSKGSRRDADSVSLIRGDDDQF 290
++K CWGCGQ GH+KKDC N A+S+ GS+ DA +V + +DD+F
Sbjct: 244 SKRKIICWGCGQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEF 275
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022139673.1 | 1.0e-95 | 73.41 | uncharacterized protein LOC111010521 [Momordica charantia] | [more] |
KAF5765959.1 | 7.6e-67 | 52.30 | putative RNA-directed DNA polymerase [Helianthus annuus] | [more] |
KAF5758504.1 | 2.2e-66 | 52.30 | putative RNA-directed DNA polymerase [Helianthus annuus] | [more] |
KAE8717380.1 | 1.4e-65 | 51.21 | hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus] | [more] |
KAE8682180.1 | 1.2e-64 | 50.87 | Transcription initiation factor IIA subunit 2 [Hibiscus syriacus] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 7.0e-31 | 28.62 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 4.0e-10 | 23.93 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CG82 | 4.9e-96 | 73.41 | uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A6A3BK59 | 6.9e-66 | 51.21 | CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... | [more] |
A0A6A3CWI3 | 5.9e-65 | 50.87 | CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... | [more] |
A0A6A2YS90 | 5.9e-65 | 50.87 | Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=... | [more] |
A0A6A3DA47 | 7.7e-65 | 50.69 | CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... | [more] |
Match Name | E-value | Identity | Description | |