Moc05g13550 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13550
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	PMD domain-containing protein
Location	chr5: 10413160 .. 10425052 (+)
RNA-Seq Expression	Moc05g13550
Synteny	Moc05g13550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTGCAAGGATGCCTTTTTGAGGTGAGAATCCAAAATTACTCACTCCCTCTAAAACCTTGAGCATAGCTTGCTTTGAGCCTAACCATTTGAGCTAGCCTATAAGATATGTGGTAAATACGGTAAATATCGAGAGTTGACTGTGTTCACACGAGATTTCCGAATAAATTATATTTCGTGGAGTTGAATTTTGATTTTTGTTGTATGTGTTGTATAGTGGATTCAATTTCTAATCTTTATCCTCTGATTCTTTCTCTCGAACTTGATGTGAAGATTGAGATGCTTGTTCTTGAATTTGGATCAAAGTTATATGTTCTTCGAAAGTCTTCAAGTCTTCAAGTTTTCAAAGTCTTCAAGTTGGTCTTTGAATCTTCAAGTCTTTAGAGAGTCTTCAATTTGGTGTGAATTATCTCAATTCTGAAATTCTGAACCTTGAAAATGAATAAGGTCCCCTCTATTTATAGAGGTTTCCATAGGCTTTGGTGGGCCATTGGACTTGGATAATTTTGGGCCAAGCCCAATTCTTTAAATGAATTTAAATTTATTTAAATTTAAATATTAATCCACATGGTCTCTTGGTAAATTGGGTTTTGGGCCAAGTTTGTGAACCAAATTGATTCCAAGTCCAGTTCTCATATGACCCAATTACATATTTTAAATGTCAATTTATCTTTAATTTTAATTTAGGGCTAATAAATAATTAATCCCTAAATAAAATAGATAATGACGTAACCGTTTATGATTGACCCAAAATTTATGGTTCTACAAATGACCCTTTTCGAAATTTATGCCAAACATAATTGTGGCTGAATTTCGAAAATATTGTGCAATAAAAAAGATGAATTTAAGCCATAATTTTGAAAAAAAAAATAATCGTGGACCAAGATATCAGTCCAATTGACAATAAATTTGCACAATTTAAAATGAGACATTTGAAATTTATCCATTGAAATTTAAATTATATTCAGAAGTGTTTTTAACTTTGAATTTAATTTAAAAGTTAAAATATGATTCAAATTCAAATTTGGGATGAATTTGAAAATTTGGAATTTATCCAATTCAAAAACGTTAGATTTGAGTTCAAATTTGAATTTTGGCTCAAATTCAAAAATATGGAATTTTTCCAACTTAATTAAAAAAAATTGATTATAATTCAAATTCAAATTTGAGATGAATTCGAGTTTTTTTTTAATTTACCCAAAAATTAAGCTGGATTATGTTTCAAATTTGAAAATATGAATTTATCTAACGTAATTTAAAAGTTGGAAGATAATTCAAATTCAAATTTGAGATGAATTTGAAAATTTGGAATTTATCCAACTTTAAATTGAATGTTGGATTATGGTTCAAATTTGAATTTTTCGATGAAATTTGATAATATGGGGTTTATCTAACGTAATTTAAAAATTGGAATATAATTCAAATTCAAATTTGAGATGATTTTGAAAATTTGGATTTAAATTTGATATCCAATCAAATTTAAAATTTGAATTTGAATAAAGAATCACACTTGGGGCTGATTTGAGTTAAAATCCCATCAGATTTCAATTTCGAATTTGAATTGGAATCCTATCTGAGTTGGGATTTGATTGGATCAAATTTAATTTAAGAATCCAATCAAATTTCCAACCATAATTTGAAAAAGGAATCCTATTTGAGTTGGGATTTGATTTGGGTAAAATTTAATTTAAGAATCCAATCAAATTTTCAACCATAATTTGAAAAAGGAATTCTATTTGAGTTGGGATTTGATTTGGGTCAAATTTAATTTAAGAATCCAATCAAATTCCCAACCATAATTTGAAAAAGGAATCCTATTTGAGTTAGGATTTGATTTGGGTCAAAGTTAAATTAAGAATCCAATCAAATTTCCAACTATAATTTGAAAAAGGAATATTATTTGAATTGAGATTTGGATTATTATTCTGGTTTGAACCCCAATTTTTTGCCTGAGCGTTCAGGTGCATTTGTAGAAGCACAGCAGAAGTCCAGTGAAAAGGTTGACTTCAAAATTTCTTCCCTTTTTTTCTTAAATTCTTGGCTTCTAGTATTCACATTATTCACTTCTTTATGTAACTTTGGATTATCATCGAGATTACCATCATCTGTTCGTCCATCTTATTTCCATCGACAAAGAGTAAGAAATTTCTCCTTATTATTTCTGCGGATTTTTTTAATCCTTATTAAACACTTACCAAAAGAAATTTTTCTTTTTTTTTTTTTAATTTTTTAACTTTTCCTTGCTACATAGCTGGAAAGCTTTCATTTTTTTTAAGTTAACACACCATTGCATGGAGGATTTTCACATTTTCAAAAACATTCTTTTTTTTTTTAAATAACACCTCCCTACCATGCGGTAGGGAGTTTTAAAAAAACTATTTTTTTTAAATACCTCCCTGCCACATGGCATGAGGTTTTAGAAAATTTTTTACTGAAAAAAAAAACTCTCTGCTATGGTTTTTTTAAAATAATTAATTTTTTTTTGAAAATAACACCTCTTACCTGCGGCAGAAGGGTTTTAAAAACTTTTTTTTTTCAAAAAAAAAAACATCTTCCTGCTATGGTAGGGAGGGTTTTAAATTTTTTCTATTCTTTTAACAACTTTCTGCTGCATGACAAAGAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTTCATTGAACTTTTTTCAAACTCCATTTTCAACTGAAAGACTTTCTCCTGCCATTATTTTAACAATGCTTTTTTTTTCTTAGGAGCCAACTTTATAATGTCACTTATTCTAATTGGAATTGAGATATCAATTTTTGCGGTTCACATAATTATCAAGGTTTGTCATTTGTCTTGTTTCTTTCTTTTCTTTGCTTGTTTCTCTCTCTTGCAGCAAAAATACTCTAAAGATTAACAAGAACACCTAATTTAGTGAAGTATCCCTCTGTTTACCATCCTTTCGAGGATGACGCCTATATAGGGATATTATCCGGCTTACGCATCCTCGCGGGACAAGGCCACTTAATTTGGTGAAGTATCCCTCATGGTTACCATCCTTTCGAGGATGACGCCTATATAGGGATATCGTTCAGCTCACCCACCCTCGCGAGACAAGGGCACCTAATTTGGTGAAGTATCCCTCACGGTTACCATCCTTTCGGGGATGACGCTTATATAGGGATATCGTCCGGCTCACACATCCTTGCGGGACAAGACCAACTAATTTGGTGAAGTATCCCTCACGGTTACCATCCTTTCGAGAGTGATGCTTATAAAGGGATATGGTCCGGCTCACACATCCTCGCGAGACAAGGCCACCTAATTTGGTGAAGTATCCCTCACAGTTACCATCCTTTCGAGGATGATGCCTACATAGAGATATCGTCCGGCTCACACATCCTCGTGAGACAAGGTCACCTAATTTGGTGAAGTATCCCTCACGGCTACCTTTCGGGGATGATGCCTATATAGGGATATCGTCCGGCTCACACATCCTCGTGGGACAAGACTACCTAATTTGGTGAAATATTCCTCACGGCTATCATCAATTCGAGGATGATGCCTATATAAGGATATCGACAAGCTTACATATTATTTCTTGTCATCGCAATGAATCATTACTTTTCTTTTCTAATATTCTCTCTTTGATTCGTTTTTTTTTTATTATTATTCATTCATCTTTATTATTTGTGTTTTTACAGGACCATGGTGTATTTCATAGGACATTTTATCTCTGATAAAAAACATCTTGTTATCTTGGCACATAAAGATCAATCTATAAAAGTGGGATTACCCTTCTAGTGGAAGAACCAAAGTCAGGTCGTCTTTCAGGGCCGTGGCCTTAATTAGATGATCTCGCTTTCCTTTCTGAATGGTCTGTGGAGAGGCATTTGAATGATGATTTTTCAACTAAAATATGGATTTTGCAATCTCCAATTCATAACAAGGTTCCTGATCAGGAGCTAGGCTTAACATTTGGACGTCGCATAATAATAATAAAGCGCAATGCGGGCCTGCATTGAAGTTTCCTAGGGAGTTTTATTATATTACTTATTGTTGGGACTTTCTCTACCTTTAAAAAGATCAGAGACTCGTGCAAGTGCACATGGTAACAAGTAATACTTGGTAGTAATCTAAGGTCGAATCCTCAGGGACTTGTTGCTTGTCAAAACAGTTTTTAAAAAGTGAACGATTCAAATATGCAATTATGATTTAGGAAGAAAAATGTGACGAAATGTGGTTGTTTGTGGTTTTAACTAACAAGAAATTTAATAAAACTTAATCTTCTTATTTCCTACCTTAGTTTTGATGCAAAACAAGAAAAACACACTATGTTGGGAAAATGCACCAGGCACAATTCTTGACTTTTCTTAGGATTTGAGTTCTACTCTTTCACTACCGCTTTTGGTTGCTGCAGAGGCTAGGGTAATCTACAATCATGTCTATGTGTGATTACAATCCTAGAGAATATTTACCAACTCACTTGCATTATGGGTCAGAGGACCTATGTCTAGGACCATGTTTTATGCGCTTATGCCTAAGTCACATCCCATATTGGTTTCCTATTATTTTACCTAAACTCACCTTTCTCAAGGTTGGGCTTTGGTGTATAAATAAAGTTCCCACTGGCCAAATAGAAAAAAGATGTAAAAAGAAGTTTTTAGAAACCAACCCAAAAAAGTGTCAAGCGCAATCTGGCCAAAATCTCGAGCGTATTGAAAATCAAATCATTTTGACTAAGACATTCCACAAAGAGGTTGATAACTAATTTAGAACATAATTAAAGGAAAGTAAATGCACGAAAACATAAAGAAAGTATTTTTCATTGAATTTAAATGAATAATAAGTCGTACAATGAGTTCTAACTTGACCATCTTCTCTTTCGAGCTTCAGGGGAGTTGAAACTCGCTAAAGAACTTTAAAATAACATAATGAACAAAGAACGGAAGTAAGAACTTGAATTAAAAGCAATACAAAAGGTAAAAGCGTGAAAAATAAAGAAATGAACAACTAGAATATAAACATAAACCCTAAAATGTGTTCTACAACTAGAGAGCAACTAAAAGAAGATGAAATGAAGCTTGGAAGGGATAAATTTTTCTGCTGGAGGGATGACTTCCTTTTATAGCACCAACGGTTGGTTGAAACTCCCCTCCATTTTAGGTGAAAATGGGTTGAGATTCACTTAACCACCTCACTTGGACTTGGACTAAAGGTTTTGAACATGTGAGAAATGCCCTCCTTGCCCTTCATGAATCAAAACGTGCGTTTTGACATTTTGTTCTCCAAAAATGCGCCGGGCGCAATTCTGAAAAAACAGATTTATGTTATTTTCTTCCAACGTTTCCTAAAGTACCATAGTTTGACTTTTATGCAGAAATAATCTATGCATATTCTATTTTAAGAATATGTGGTCCTTTTTGGCAAATAATGATGGGAAAGGGGTAAAAACCATGGTCAAATAGGCCTACGGACACATGTTTCTGCAGTAAACAGTCAACCCTAACACTTACTATTGGGAATGGCTAGAGGCCGTGGTTACTCGCAGCGAAAAGACCCTTCACGAAGCTCGTATATTTGATGCAAAAATGACTTCCCTATATACATATGATCGTAACAATGACGTGATTTGAGCCTTTTGCGAGGCTTGGTGTCCCTCAACCAATACTTTACGTACTTCTGTCAGTGAATTATCTATCTCTCTATGGGATTTGTGGAAATTTGGAGGTCTTCCTATTATAGGAAAATTCTATGAAGAAGTCATTCCTAGCCATAAAGAACTAATAGAATCGGGTTGGCAAGACAGATATCTCCCAAAAAGCTGTGAGTACCTTTTTAAAGTGTACTACGATTTGACCTCTAAAAGAAATGGTCATTCTCATGTTTCCACCAGCTCCTGGATTTCCTTCTGGTTCAAGGGTGTGAGCTAAAGTATATTAAGCCTCCTCCTCGAAAGCCAACAAAGAAATCTCGTCCTCGTTCAACTCATAATCCTACTAGTGCCATTTCCAAAGCTCGTGATTGGTCAAGTAAGGAGAAATGCTTGTTCCACGAACATAATATAGACGATGAGAGGAGAGAAAAAACATATCTAGCTGCCTTCATATCCTGTGGGTTATGTTGCTTCGTGTTTCCTCACAAGAACCTCAACTTTCTTCGTCCAGGAATTTTTAAGATCGCTAGCTTGATAGCCGAGGGTAACACTTTCAGCCTTGCCACCCCAGTCTTTGCTAATATATATCACAGATTAGGTCAGATCTTAAAGGCCTCTGAGCCAGTTGTAGGTTTGGAAGCTTGCATTCTCATGCATTATAGTCATGGTTGGTTGGCTCACTACTTCAATACACATTACAAAACTCTTGAAGAAGTCCCAAGCCCCATGATGGTTGAGTTTTCAGGTGAAGGTGACTCTATATATTTTAAAAATGCTGCAGCTCGTGAATTGATTTATAAAGGTAAGTCCATAGCATGACATGTAAATGTTCAATCCAGGAATCGGAACGAACTTTTAGTGGATTATGGCAATTTGTCATTCGCACAATGTTCCTATTTCTCAAGCCTTAGACCTTGTCACCTATCATCACGGTGCGGTGACTCAATGAATATTGAATCATACAACCCTCACCGATTTGGTCGACAGTTTGGCTTCTATCAAGACATGCCTTTTTTTTGGAAAGAAATGGCCCCCTTAGTTAATTTGGAGAACGACCTATATCATTGGATAGTTTGCACTTGAACTAATACATCGTCACAAGTGTTCATTCCGGTTCGTACAAAAGCTGGTGGTCTAACAAACATGGGGATTACCTTGGGAAAGGTATATTAAAGTTGGTGAATAGTGTTCTTCCTCCTTCACCACAACCTAAAAAAACATAAAGGAGGTAATAAAGGAGGAAAAGACCTTAGTCTAATTGAGGATAAAGTCTCTGCTCCGACATCGGATGTCAACGAACATACTGAAGAGAGCTAAGACAGTAATGACACCGTCATTGGAAGCGAACCAAGAGATCCAAGAAATCTTCCCACATTGACAATCAATTTTTTATGGCATTTCCTGCACCTCTCAAATTCCTGACAACGTCAAAGCATTGGTGATTGGTTCCTCTTCTTTTAGTTCTTACTCTTCTTACTTTTCCTTTATTACCACATATTCTAATTTGCCCCATTTCTTTTTACAGCTACCTTTGGAGGATTTCATTGAAAAAGTGGACCAACAACATAGTAGAGAGTCGATGATGAGTCCAGATGGTTTCGAATCTTCCATAAAACATATTGAAAGTTCCAATACCTCTATAGTTGAGAAGATAACTTCTCCGCCTCTTCCTATTATGGTCAATACTCCTCAACCAGTTCAGAATAAAGCACCGGTTGCAAACCCTAAGATCTCTCATTACTCTGCTGAAATTGTAATCTCTAATTTTGCCCAACAAGCAGCTATGGCTAAGTGGGAAGACATATAGGAGAAGATTGTCCGCACTCCCTTTAAGAATGTTGCTGATCTAAAAAACGAAGTACATAAAATATTCGGCTGGATCTCAAACACTCGAACAGATAACTTAACATCTCTCTAGGCATTCGTTGATGGCTACTTCCAGAAACTTGAAAGATATAATAATCTAGAGTCCTCATTTTCTAGTCAACTAACCAAGGTTCGTCAACTAGAAAAGATGAAATCTAATTTGGAGAAATCATTACTCTATGAAGATCACATACTCGGAGAGCAGAATGCGCTCCAAGAGCGATTCAATAAATTGGCCTCAAGAATCGAGGAGCATGAGGCTGAGCTTAAAGCTATGAGGATTGAAGCTGAGACGTTTTCCTGTTTAATTTCCGAGAAAGGAAATGATCTGGACAAACATAGGCTCGAAACCTCTACTATACGTGATGAGATAAGTAGTATGGAATACACCACTATTACCAATGAAACAAATGTGAGATCTCTCGAGGGAGTTTGTAATACTTTGGAAAGCGCACGCCACGAGCTGAAAGAGGAACATTGTGCGAATGAAAAATTGCTATCATTCACTAAAAGTTCGTTTCGATTCCTGGATTGAACGTTTACATGTCATGCTATGGACTTATTTTATAAATCAATTCACGAGCTGCAACATTTTTAAAACATATAGAGTCACCTTCACTTGAAAACTCAACCATCCTGGGGTCTGGGATCTCTTCAGGTGTTTTGTAATGTGTATTGAAGTAGTGAGCCAACCAACCATGAATTTAATGCATGGGAATGCAAGCTTCTAAACCTACAACTGGCTCAGAGGCCTTTAAGATCTGACCTAATCCGTGATATATATTAGCCAAGACTCGGATGGTAAGGCTAAAAGTGTTACCCTCGGCCATCAAGCTAGCGATCTTAAAAACTTCTAAATGAAGAAAGTTGAGCTTTTTGTGAGGAAACACGAAGCAACATAACCAACAGGATATGAAGGCAGCTAGATATGTTTTTTCTCTCCAGTCATCGTCTATATTATGTTCGTGGAGCAATCATTTCTCCTTACTTGACCAATCACGAGCTTTGGAAAAAGCACCAGTAGGATTATGAGTTGAACGAGGACGAGATCTCTTTTTTGGCTTTCGAGGAGGAGGCTTAATATACTTTAGCTCACCCTTGAACCAGAAGGAAATCCAGGAGCTGGTGGCAACATGAGAATGACCATTTCTTTTAGAGGCCAAACCGTAGTACACTTTAAAAAGGTACTAAGCTTTTTGGGAGATATCTGCCTTGCCTACCCGATTCTCTGTTAGTTCTTTATGGCTAGGAATGACTTCTTCATAGAATTTTCCTATAATAGGAAGACCTCCAAATTTCCACAAATCCCATAGAGAGAGATAATTCACAGCAGAAGTATGTAGAGTATTGGTTGAGGGACACCAAGCCTCGCAAAAGGCTCGAATCACGTCGTTGTTACGACCATAAGTATATAGAGAAGCCATTATTGCATCAAATATACGAGCTTCGCGAAGGACTTTTCACTGCGAGTAACCACGACCTCTAGCCATTCCCAATAGTAAGTAATATAATAAAACTCCCCAGGAAACTTCAATGCAGACCCCTATTGCGACTATTATTTATTATGCGACGTCCAACTGTTAAGCCTAGCTCCTGATCAGGAACCTTATTATGAATTGGAGATTGCAAAATCCATATTTTAGTTGACCAATCATCATTCAAATGCCTCTCTACAGACCATTCAGAAAGGAAAGCGGGATCATCTAATTGACACCATAGTCCAGAAAGACGACCTGACTTTGGTTCTTCCACTGGAAGGGTAATCCCATTTTTTATAGATTGATCTTTATGTGCCAAGATAACAAGATATTTTTTATCAGAGATAAAATGTCCAGTGAAATACACCATTGTCCTCCAAAACACAAATAATAAAGAGGAATGAATAATAAAAAAAAGCGTATCAAAGAGAGAATATAAGGGAAAAAAATTAATGATTCATTGTGACGACAAGAAATAATATGTAAGCTTGTCGATATCCCTATATATGTTGGGTACTCTGTCCTAAAACTCGTAGTTTGTAAACAGTGAACATTAATGTGAGGTTATTCAGACAAATGTTGATAAATGAAAGTCAATTTGTTTTTTAATAAATCCAATAAACTACGAACCCTTGGCTATTATAATGAGTACTTGGACTTTATGTGGAGACATAAACTGGATCAAGTTCAAGTAAATAGCCTAAACAGTCTATAGTACATGGATAAAGTTGGGTACTTTTTCCTGGAGACACTATTGAATACGGCCCGCTTTATGATTGTTACAAATGTTGTAAGGTGTCATAAACGAAGTGATCCTGATTCGTTCGTGTAGAAACGTGTGAGCGGGGGTGTTATACACAATGAGATTGTGTAAGACTGACCCTGAAATAATCATTGTTACGTATTAACACCGTTTACGGATAACACTGATTAATTTCGTTTATCGATGACCTAAATAACTTGATCTAAATCCTGAGCCATCTATGAACTCCTATTTATTCAAAACTCTCCTTTGATCTGCATAGGTGAGAGTAAGCTTATCACCGCTGCTCAATATGCCTCCTATTCAGGGATAAGACTGGGTAGATAGCTGGGGACATAGAATTAGTAAGACGGAATTCACTCCTACCCAATTTAGAGATAGTAGAGAGGTTGTTCCCTTAAGGGCTGATCCCGGGTCTTGTACAAGGGGCCCCATCCTCTCACTGGCCCGAGAGGAATTGGATTTAGTGATTTGATCCTAAATCAATTGTTCATTAGAGGGATAGTGGTACTTAAGGAGAAAAGATGTAACTCAGGGGTAAAACGGTTTTTTTGACCTAGCTGAGGTTACGAACAGTCTGTGAAGGATCAACTTACCGATGACGGTTATATCGAATGGACACAAATATATCTACAGTGAGGGGAGTGCATCTACAGGCTATAGTGGACAGTCCTGTTAGTTAACGAATATTGATTAACTAAGTTAAAGAGTTTGACCGGTTAGTCTCGAATCGTTAGAGCCCATGATCTGTAGGTCCAACGGGTCTCCATGCTAGCTCATAAAGGATAAAATTGATGAATTAGGTGAAGCAAGAATTTGAAGTGTTCAAATTCGGTTTTTAAGGGAATATTGTATTTTATATGAGATATAATATATAATCTAATTGACATTTAATTATTGTGGAGAGTATGACTTATTTAAATTAGTTTTAAATAAGTTCAAAGCATGAAAAAGAGTTTTAATTTGATTAATGTGATTAATCAAGCTTAGGTGTCAAAGACCAATTAATATGAGATATTGATTTGGCTTGGTTTTTGTTTTAATAGAAAATTGATAGTCCAATTTTTGTTTTTATAAAAATTAGTTTTATCAAAGTTGGATTTTCCCACTAACTAGTGGTTTTTGAAGTGTTTCTTCAAGGCAATGACACCTATCTTTTACATGCTAGTGGAGTTTGAAGTGGAAGGCATGCAAGGCATGTCTTTGCATGCATTTGGTCTTTATATAGGTGATGAAGATCACTTGGATAAGGCTAATGCTTACTTGCATAAGTGCAGAATTTTTCCACTCAAATTTCTATTGTCTTCTCCTAGCCATTAGTGTTTTCCCTTTGTTTTCACTCAAAATTCGGTCCCACAACCGTGTTCATCAACCCGAGGATAGCACGGATTTGTCGTTGATGGTCCCATTGAGTTAGGAGAAGAAGTTATAATGGAGGTCTTCAAAGGTATAAAGTTCATCTTTTTCTCTTTACTTTTTTCATCATTTTTCCAAGCATGCTTATTTTAGTTAAATTGCTTCATTAAGTGTATTATGATCCTTAGCTTCCGTTGTGCATATCTAAGAGTTCCATCAATATAGGCATCATCCCCGACAGGATGGTAGCCGCGAAGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCGGACGATATCCCTATATAGGTGTCATCCCCGAAAGGATGATAATCGGGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGTCGGACGATATTCCTATTTAGACGTCATCCCCGAAAGGATGGTAGCCGTGAGGGATACTTCACCAAATTAGATGGTTTTGTCCCACGAGGATGTGTGAGCCAGACGATATCTCTATATAGGCATCATCCCCCAAAGTATGGTAGTCGTGAGGGATACTTCACAAAATTATGTGGCCTTGTCCCTCGAGGATGTGTGAGCCAGACGATATCCCTATATAGTCGTCATCCCCGAAATGATGGTAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCTCGAGGATGTGTGAGCCGAACGATATTCTTATATAGGCGTCACCCCCGAAAGGATGGTAACCATGAGGGTCTTGTGAGGATGTGTGAGTCAGACGATATCCCTATATAG

mRNA sequence

ATGATAGTGCAAGGATGCCTTTTTGAGCGTTCAGGTGCATTTGTAGAAGCACAGCAGAAGTCCAGTGAAAAGGATTTGAGTTCTACTCTTTCACTACCGCTTTTGGTTGCTGCAGAGGCTAGGCTCCTGGATTTCCTTCTGGTTCAAGGGTGTGAGCTAAAGTATATTAAGCCTCCTCCTCGAAAGCCAACAAAGAAATCTCGTCCTCGTTCAACTCATAATCCTACTAGTGCCATTTCCAAAGCTCGTGATTGGTCAAGTAAGGAGAAATGCTTGTTCCACGAACATAATATAGACGATGAGAGGAGAGAAAAAACATATCTAGCTGCCTTCATATCCTGTGGGTTATGTTGCTTCGTGTTTCCTCACAAGAACCTCAACTTTCTTCGTCCAGGAATTTTTAAGATCGCTAGCTTGATAGCCGAGGGTAACACTTTCAGCCTTGCCACCCCAGTCTTTGCTAATATATATCACAGATTAGGTCAGATCTTAAAGGCCTCTGAGCCAGTTGTAGGTTTGGAAGCTTGCATTCTCATGCATTATAGTCATGGTTGGTTGGCTCACTACTTCAATACACATTACAAAACTCTTGAAGAAGTCCCAAGCCCCATGATGGTTGAGTTTTCAGGTGAAGGTGACTCTATATATTTTAAAAATGCTGCAGCTCGTGAATTGATTTATAAAGTGTTCATTCCGGTTCGTACAAAAGCTGGTGGTCTAACAAACATGGGGATTACCTTGGGAAAGCTACCTTTGGAGGATTTCATTGAAAAAGTGGACCAACAACATAGTAGAGAGTCGATGATGAGTCCAGATGGTTTCGAATCTTCCATAAAACATATTGAAAGTTCCAATACCTCTATAGTTGAGAAGATAACTTCTCCGCCTCTTCCTATTATGGTCAATACTCCTCAACCAGTTCAGAATAAAGCACCGGTTGCAAACCCTAAGATCTCTCATTACTCTGCTGAAATTGCATTCGTTGATGGCTACTTCCAGAAACTTGAAAGATATAATAATCTAGAGTCCTCATTTTCTAGTCAACTAACCAAGGTTCGTCAACTAGAAAAGATGAAATCTAATTTGGAGAAATCATTACTCTATGAAGATCACATACTCGGAGAGCAGAATGCGCTCCAAGAGCGATTCAATAAATTGGCCTCAAGAATCGAGGAGCATGAGGCTGAGCTTAAAGCTATGAGGATTGAAGCTGAGACGTTTTCCTGTTTAATTTCCGAGAAAGGAAATGATCTGGACAAACATAGGCTCGAAACCTCTACTATACGTGATGAGATAAGTAGTATGGAATACACCACTATTACCAATGAAACAAATGTGAGATCTCTCGAGGGAGTTTGTAATACTTTGGAAAGCGCACGCCACGAGCTGAAAGAGGAACATTTGGAGTTTGAAGTGGAAGGCATGCAAGGCATGTCTTTGCATGCATTTGGTCTTTATATAGGTGATGAAGATCACTTGGATAAGGCTAATGCTTACTTGCATAAGCATCATCCCCGACAGGATGGTAGCCGCGAAGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCGGACGATATCCCTATATAGGTGTCATCCCCGAAAGGATGATAATCGGGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGTCGGACGATATTCCTATTTAGACGTCATCCCCGAAAGGATGGTAGCCGTGAGGGATACTTCACCAAATTAGATGGTTTTGTCCCACGAGGATGTGTGAGCCAGACGATATCTCTATATAGGCATCATCCCCCAAAGTATGGTAGTCGTGAGGGATACTTCACAAAATTATGTGGCCTTGTCCCTCGAGGATGTGTGAGCCAGACGATATCCCTATATAGTCGTCATCCCCGAAATGATGGTAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCTCGAGGATGTGTGAGCCGAACGATATTCTTATATAGGCGTCACCCCCGAAAGGATGGTAACCATGAGGGTCTTGTGAGGATGTGTGAGTCAGACGATATCCCTATATAG

Coding sequence (CDS)

ATGATAGTGCAAGGATGCCTTTTTGAGCGTTCAGGTGCATTTGTAGAAGCACAGCAGAAGTCCAGTGAAAAGGATTTGAGTTCTACTCTTTCACTACCGCTTTTGGTTGCTGCAGAGGCTAGGCTCCTGGATTTCCTTCTGGTTCAAGGGTGTGAGCTAAAGTATATTAAGCCTCCTCCTCGAAAGCCAACAAAGAAATCTCGTCCTCGTTCAACTCATAATCCTACTAGTGCCATTTCCAAAGCTCGTGATTGGTCAAGTAAGGAGAAATGCTTGTTCCACGAACATAATATAGACGATGAGAGGAGAGAAAAAACATATCTAGCTGCCTTCATATCCTGTGGGTTATGTTGCTTCGTGTTTCCTCACAAGAACCTCAACTTTCTTCGTCCAGGAATTTTTAAGATCGCTAGCTTGATAGCCGAGGGTAACACTTTCAGCCTTGCCACCCCAGTCTTTGCTAATATATATCACAGATTAGGTCAGATCTTAAAGGCCTCTGAGCCAGTTGTAGGTTTGGAAGCTTGCATTCTCATGCATTATAGTCATGGTTGGTTGGCTCACTACTTCAATACACATTACAAAACTCTTGAAGAAGTCCCAAGCCCCATGATGGTTGAGTTTTCAGGTGAAGGTGACTCTATATATTTTAAAAATGCTGCAGCTCGTGAATTGATTTATAAAGTGTTCATTCCGGTTCGTACAAAAGCTGGTGGTCTAACAAACATGGGGATTACCTTGGGAAAGCTACCTTTGGAGGATTTCATTGAAAAAGTGGACCAACAACATAGTAGAGAGTCGATGATGAGTCCAGATGGTTTCGAATCTTCCATAAAACATATTGAAAGTTCCAATACCTCTATAGTTGAGAAGATAACTTCTCCGCCTCTTCCTATTATGGTCAATACTCCTCAACCAGTTCAGAATAAAGCACCGGTTGCAAACCCTAAGATCTCTCATTACTCTGCTGAAATTGCATTCGTTGATGGCTACTTCCAGAAACTTGAAAGATATAATAATCTAGAGTCCTCATTTTCTAGTCAACTAACCAAGGTTCGTCAACTAGAAAAGATGAAATCTAATTTGGAGAAATCATTACTCTATGAAGATCACATACTCGGAGAGCAGAATGCGCTCCAAGAGCGATTCAATAAATTGGCCTCAAGAATCGAGGAGCATGAGGCTGAGCTTAAAGCTATGAGGATTGAAGCTGAGACGTTTTCCTGTTTAATTTCCGAGAAAGGAAATGATCTGGACAAACATAGGCTCGAAACCTCTACTATACGTGATGAGATAAGTAGTATGGAATACACCACTATTACCAATGAAACAAATGTGAGATCTCTCGAGGGAGTTTGTAATACTTTGGAAAGCGCACGCCACGAGCTGAAAGAGGAACATTTGGAGTTTGAAGTGGAAGGCATGCAAGGCATGTCTTTGCATGCATTTGGTCTTTATATAGGTGATGAAGATCACTTGGATAAGGCTAATGCTTACTTGCATAAGCATCATCCCCGACAGGATGGTAGCCGCGAAGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGCCGGACGATATCCCTATATAGGTGTCATCCCCGAAAGGATGATAATCGGGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCGAGGATGTGTGAGTCGGACGATATTCCTATTTAGACGTCATCCCCGAAAGGATGGTAGCCGTGAGGGATACTTCACCAAATTAGATGGTTTTGTCCCACGAGGATGTGTGAGCCAGACGATATCTCTATATAGGCATCATCCCCCAAAGTATGGTAGTCGTGAGGGATACTTCACAAAATTATGTGGCCTTGTCCCTCGAGGATGTGTGAGCCAGACGATATCCCTATATAGTCGTCATCCCCGAAATGATGGTAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCTCGAGGATGTGTGAGCCGAACGATATTCTTATATAGGCGTCACCCCCGAAAGGATGGTAACCATGAGGGTCTTGTGAGGATGTGTGAGTCAGACGATATCCCTATATAG

Protein sequence

MIVQGCLFERSGAFVEAQQKSSEKDLSSTLSLPLLVAAEARLLDFLLVQGCELKYIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISCGLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLEACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIYKVFIPVRTKAGGLTNMGITLGKLPLEDFIEKVDQQHSRESMMSPDGFESSIKHIESSNTSIVEKITSPPLPIMVNTPQPVQNKAPVANPKISHYSAEIAFVDGYFQKLERYNNLESSFSSQLTKVRQLEKMKSNLEKSLLYEDHILGEQNALQERFNKLASRIEEHEAELKAMRIEAETFSCLISEKGNDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVCNTLESARHELKEEHLEFEVEGMQGMSLHAFGLYIGDEDHLDKANAYLHKHHPRQDGSREGYFTKLGGLVPRGCVSRTISLYRCHPRKDDNREGYFTKLGGLVPRGCVSRTIFLFRRHPRKDGSREGYFTKLDGFVPRGCVSQTISLYRHHPPKYGSREGYFTKLCGLVPRGCVSQTISLYSRHPRNDGSREGYFTKLGGLVPRGCVSRTIFLYRRHPRKDGNHEGLVRMCESDDIPI

Homology

[Close]

BLAST of Moc05g13550 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 7.1e-47
Identity = 104/200 (52.00%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 52  ELKYIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAF 111
           E+KY KPPPRKP K SRPRSTHNP     +  DWS  E  +F + ++ D+ R+KTYLAAF
Sbjct: 253 EVKYSKPPPRKPKKTSRPRSTHNPDGIPIRRPDWSKAELKVFLDLSVTDDHRDKTYLAAF 312

Query: 112 ISCGLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVV 171
           +SC LC FVFP K L+ LRP +FK+ASL+AEG TFSLA PV ANIY  L Q+  ++  + 
Sbjct: 313 LSCWLCVFVFPDKQLS-LRPEVFKVASLMAEGYTFSLAVPVLANIYSGLRQVHDSTSSLG 372

Query: 172 GLEACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIYK--- 231
              AC  +HY HGWLA YFNTHYK    +  P MVEFSGEG + Y+ N  AR  I+K   
Sbjct: 373 YSNACFPLHYVHGWLALYFNTHYKAPRSLRGPRMVEFSGEGGAKYYTNLEARTHIHKGKY 432

Query: 232 ----VFIPVRTKAGGLTNMG 245
                 +P + K   LT+ G
Sbjct: 433 VSWHACLPTKNKDELLTDDG 451

[Close]

BLAST of Moc05g13550 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 7.2e-07
Identity = 45/137 (32.85%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 328 VDGYFQKLERYNNLESSFSSQLTKVRQLEKMKSNLEKSLLYEDHILGEQNALQERFNKLA 387
           V+GYFQ +E +N + SSF  Q TK  QL + K  ++   + E+ IL E N  + R  +L+
Sbjct: 858 VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLS 917

Query: 388 SRIEEHEAELKAMRIEAETFSCLISEKGNDLDKHRLETSTIRDEISSMEYTTITNETNVR 447
           ++  + EA+LK +R E+   S +I +   +L + + E S   +EI  +E   I  + + +
Sbjct: 918 AKEAKLEAKLKMVRAESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAK 977

Query: 448 SLEGVCNTLESARHELK 465
            L  +  +LES   ELK
Sbjct: 978 MLSTLRESLESTLEELK 994

HSP 2 Score: 193.4 bits (490), Expect = 6.7e-45
Identity = 97/173 (56.07%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 231 YDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSC 290

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F++ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 291 WLCLFVFPQKG-SFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 350

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLA+YF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 351 FHFPMHYVHGWLAYYFGTHYPLPTEVRRPKMTNFSGEGGSIYFGKYEARELIH 402

[Close]

BLAST of Moc05g13550 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-44
Identity = 97/173 (56.07%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 270 YDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSC 329

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLR G+F++ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 330 WLCLFVFPQKG-SFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 389

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 390 FHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEARELIH 441

[Close]

BLAST of Moc05g13550 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 9.1e-10
Identity = 55/199 (27.64%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 289 VEKITSPPLPIMVN-TPQPVQNKAPVANPKISHYSAEIA-------------------FV 348
           ++K++S   P+  +  P  V NK  + NP+ S    EIA                   ++
Sbjct: 746 LQKVSSAHAPLKFSELPLGVSNKQTMRNPEPSQLRPEIATVLSGIEKIHADGLASLEEYL 805

Query: 349 DGYFQKLERYNNLESSFSSQLT---KVRQLEKMKSNLEKSLLYEDHILGEQNALQERFNK 408
           + Y +++E +N+++SS+S+QL+   K  QL +  S ++++L     + G+   +QER  +
Sbjct: 806 NSYLKRVENFNDVQSSYSAQLSSTDKACQLNEKTSAIKEALTLVKQLRGDAKVIQERTVE 865

Query: 409 LASRIEEHEAELKAMRIEAETFSCLISEKGNDLDKHRLETSTIRDEISSMEYTTITNETN 465
           L+   +E E  L+++  E+E  S L  EK   +D+  LE + ++DE++++E T    E  
Sbjct: 866 LSLERKELEKRLQSINAESEQLSILSCEKAEAIDQQELEVAKLQDEVTTLESTPAITEEA 925

HSP 2 Score: 191.4 bits (485), Expect = 2.5e-44
Identity = 97/173 (56.07%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP     +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 219 YDKPTTRKQKKASRSKSTQNPDGLKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLSC 278

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F+ ASL+A    +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 279 WLCLFVFPQKG-SFLRPGVFRAASLMAADTIYSLAVPVLANIYHGLGLITKASNPIGRMD 338

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 339 FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIH 390

[Close]

BLAST of Moc05g13550 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 2.5e-44
Identity = 97/173 (56.07%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y  P  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 243 YSIPITRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLSC 302

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F+ ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 303 WLCLFVFPQKG-SFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 362

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
              LM+Y HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 363 FHFLMYYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGRSIYFGEYEARELIH 414

[Close]

BLAST of Moc05g13550 vs. ExPASy TrEMBL
Match: A0A5D3DCE5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18270G00010 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-45
Identity = 97/173 (56.07%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 231 YDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSC 290

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F++ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 291 WLCLFVFPQKG-SFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 350

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLA+YF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 351 FHFPMHYVHGWLAYYFGTHYPLPTEVRRPKMTNFSGEGGSIYFGKYEARELIH 402

[Close]

BLAST of Moc05g13550 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.5e-45
Identity = 97/173 (56.07%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 270 YDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSC 329

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLR G+F++ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 330 WLCLFVFPQKG-SFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 389

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 390 FHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEARELIH 441

[Close]

BLAST of Moc05g13550 vs. ExPASy TrEMBL
Match: A0A5D3C543 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00620 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-44
Identity = 97/173 (56.07%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP     +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 219 YDKPTTRKQKKASRSKSTQNPDGLKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLSC 278

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F+ ASL+A    +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 279 WLCLFVFPQKG-SFLRPGVFRAASLMAADTIYSLAVPVLANIYHGLGLITKASNPIGRMD 338

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 339 FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIH 390

[Close]

BLAST of Moc05g13550 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-44
Identity = 97/173 (56.07%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y  P  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 243 YSIPITRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLSC 302

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRPG+F+ ASL+A G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 303 WLCLFVFPQKG-SFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 362

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
              LM+Y HGWLAHYF THY    EV  P M  FSGEG SIYF    ARELI+
Sbjct: 363 FHFLMYYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGRSIYFGEYEARELIH 414

[Close]

BLAST of Moc05g13550 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.8e-10
Identity = 43/141 (30.50%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 327 FVDGYFQKLERYNNLESSFSSQL---TKVRQLEKMKSNLEKSLLYEDHILGEQNALQERF 386
           +++ Y ++++ +N+++SS S+QL    K RQL +  S ++++L     + G+   +QER 
Sbjct: 737 YLNSYLKRVDNFNDVQSSHSTQLLSMDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERI 796

Query: 387 NKLASRIEEHEAELKAMRIEAETFSCLISEKGNDLDKHRLETSTIRDEISSMEYTTITNE 446
            +L+   +E E  L+++  E+E  S L  EK   +D+  LE + +RDE++++E T    E
Sbjct: 797 AELSLERKELEKRLRSINAESEQLSILSCEKAEAIDQQELEVAKLRDEVNTLESTPAITE 856

Query: 447 TNVRSLEGVCNTLESARHELK 465
             + +L  V  ++E+AR E K
Sbjct: 857 EAIEALATVRQSMEAAREEFK 877

HSP 2 Score: 189.5 bits (480), Expect = 4.7e-44
Identity = 95/173 (54.91%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 55  YIKPPPRKPTKKSRPRSTHNPTSAISKARDWSSKEKCLFHEHNIDDERREKTYLAAFISC 114
           Y KP  RK  K SR +ST NP  +  +AR+WSS+E  LF E  I D+ +++TYLAAF+SC
Sbjct: 94  YDKPKTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSC 153

Query: 115 GLCCFVFPHKNLNFLRPGIFKIASLIAEGNTFSLATPVFANIYHRLGQILKASEPVVGLE 174
            LC FVFP K  +FLRP +F++ASL+  G  +SLA PV ANIYH LG I KAS P+  ++
Sbjct: 154 WLCLFVFPKKG-SFLRPEVFRVASLMVAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 213

Query: 175 ACILMHYSHGWLAHYFNTHYKTLEEVPSPMMVEFSGEGDSIYFKNAAARELIY 228
               MHY HGWLAHYF THY    EV  P M  FSGEG SIYF    A ELI+
Sbjct: 214 FHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGKYEAHELIH 265

The following BLAST results are available for this feature:

BLAST of Moc05g13550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	7.1e-47	52.00	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
XP_031745312.1	7.2e-07	32.85	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0053466.1	1.1e-44	56.07	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
KAA0053466.1	9.1e-10	27.64	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
KAA0060611.1	2.5e-44	56.07	hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of Moc05g13550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCE5	3.2e-45	56.07	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UGW6	5.5e-45	56.07	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3C543	1.2e-44	56.07	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7V4F4	1.2e-44	56.07	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7V4F4	9.8e-10	30.50	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of Moc05g13550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 446..473
None	No IPR available	COILS	Coil	Coil	coord: 376..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..82
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 54..225
None	No IPR available	PANTHER	PTHR36607:SF19	SUBFAMILY NOT NAMED	coord: 54..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13550.1	Moc05g13550.1	mRNA