Moc05g12830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g12830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr5: 9881820 .. 9885785 (-)
RNA-Seq Expression	Moc05g12830
Synteny	Moc05g12830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCTGAAGATGTACTCCGGGCAAAACATCTCCAGCATCAAACTGTATTATCTAGGCATGCAAAATCTCGAGAGCAGAGCTCGAAGCAGAAGAAAGGTCAAGCAAGTCGTGATTATGAGACAAAGAAGCCTATCCACGATAACCGATCTCGATCAGAGCGAATAGTACGAGTTCATGATCGCTATTTAAGAGAGTTCGACCGTTACACCCCACTCAACGTCCCCTTATCAGAGATCCTGGCCAACAAATAGAATAGCGATTTGCATACGATGTTGGAAAAGCCAAGTGAAATGAAGTCGAGTCAGGATAAGCAGAGTAAAAGCAAGTACTGCAGGTTTCATGGAGACCATGGACATGATACTTCGCAATGCTTTGATTTGAGAGACTAGATAGAAAACTTGATCAGGAGAGGCCATCTGAAAAAGTATGTTGGGAAAAAAGATTCCTGTTCTTCTCTGGGGAAGAGAAAATTCGATCGAACCGATCGTGATGATCAAGACAAATCTCCCTCACCCAAAAAAAGAGAAGCAGCTGGAAAAATGCCCGTGGTGATAAACACCGTTTTTAGTGGTCCAAGTGGAGGAAAATAAGGCAATAAGAGGAAAGCCTTCATTCGAGAAACTAGCCATGAAGTCAATACATCATATGTTCGATCAACGGTGGCAATATCTTTTTCTGCAGATGACTTGGAGGGAGTTCATTTACCATATAATGACGCTTTGGTGATCTTACCCATAATTGATAATTTACAGGTCCCGCGGGTACTCATCAATGGAGGGGCATCCACCAACATACTTCGCTCATTGGCTTATGTGAATGAGATTGTGAGTTTCTTGAGAGTGATGTTTTTGCGTGTAACCACGAGTGACTATACCTTTACGAGTGTAAACACGTGAGGGAGTGCTTGTGAGGTCCATTTTTCTTTGTTACTTTGCTTTCTTTTGCAGCCATGTCTCAGCAAGAGAATTATGCAAAATTTTTCCACAACATGGAGCATTTGACAAAGACGTTTCAAAGGTTGGACTCGAGACTCAAATCTATTGAAAGACAACTAACCCATCTGAAGCAAAAGAGGAGGAATAAGTCAATGCACCATAAAGAGTATTTGGAGGTCGAAGGAAGGGAACATGGTGGATGTTGCAATGCTGTCCAAAGGAGAAATCTAGGAGGAGTTCATAAAGTTGATCCTATATTGAGAAGCATCAAGGCTAAACTTCCTATGTTCCATGGAAGTACAAACCCGAAGGAATACATTCAATGGGAACAGCAAGTTGAACGTGTCTTTGATTACTACCCATTAAGTGAGGAAGTAAAGGTAAAACTCATTGTTGCTCAACTTCGAGATTATGCAATTACTTGGTGGGATAAATTGTTTTTGAGTAGGAGGAAGAACTTTGAGTGTCCAATAAACTCATGGTATGTTCTCAAGCATTTAATGAGAGAGCATTTTGTTCCCAAGTGTTTCTATAAGTTGAGATCTTTGAGACAAGGTAGCAATAGCGTGGAGGCTTACTACATGGAGATGCAAATGTTGCTTGAGGAGCTTGATCTTTATGAGGATGAGGAAGTTATAATGGCTCGTTTCTTAAGAGGACTCAAGAAGGAAATTGCCGAACGACTTGATCTTCAATTTTATGAGGATTTAGAAGGGATGGTGCAAATAGCCATAAAGATTGAGAAACATCTCCAAAGGAAGTCTACAAGGTATAATAAACCTAAACCATTTTCTAAGATTCATTTATCTTTAGAGAATTTTAGTTTACCAACTAACATTAAGCCTATTGTTGAGGTAGAAAGTGATCCAATTCAAGAAGACATAGTTTGTGACCTAGTGCCACATGCTGATAGTGTTTTATTTAGTAGGCAACTAGATTGCAATGAATTGTTTGATTGTAACACTTCTACTATTGTAACACCTACTCCTCAAGATGTATATGATGTTGTGTGTGAGTTAGGGAAAAAGGCGCATGAGGTCAAGACAAAAGCATGTGAATTGTTTGAAAAAGAATCTTGTGTGAGAGAAAAGCATGAGATTAATTTGTGGCCTAAAGAGAAAAATGAGAGAAAAGCCAAGAATGTAAGCTTGTTTGAAAAAGTTTGTGATGTCAACTATGTTTTATTTTCCAAACAAAACATTCTTGATCTTTTGTACAAAGGTGTTTGTTATTTAACGGGAGAGCTTAAACCATGTTGGTCTAGTGTTTCCCTTGAGTTTTTACAGGAGGCTAGAACACTCATTGAGAAGATTGAACCAAAGATTGCTTCCAAAGTACAAAATGACAGTCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAGCAAAAGTCCCAATTTGCTTCTAAATTCATTCATGGAAGGAAGTATACAATGTTCAAGCCGAGTGATTGGGTTTGGAGACACTATTGGAAGGATCGCTTTTCTTTTGGAAAGAAGTTGAAGAGGAACCCATGTAGAGCTATAAATTTGACATTTGATGATTTTAAGAGTGCTCTACACGGCAAGTTCGATGAAAATTACATATTCAATGCTGCTGATTTTCATCCATTTGATGTAGGAGATTCTTTTGATTCGAGGACGAATCCTTTTGAAGACAGGGAGGATGATATGAACCAAAGTGTCTTAGTCTTCAAGAGTTAAAGGAAGTTGTTGGAGAATCCTATGTCCAAGTTGACAACAAATTGGAGTTGCATTAAATGCACGATAGTGTCATTTATGGCAACCTCAAGTTGCATTGAATTAAGTCAAGAACAAGTCCAACTTCATTTACTACAAACTCAAGTTGCATTAATGGAAGTCTAAGTTGAACTCAAGATGCATTAAATGAACAAGACTTCAAAGTACTTGAAAGTAGTTCAAACTCCAATTCATTCACTCTTGAAGGGTTACAAACTCTTGGTTTTATGGTGGAGGAGTTTCATTCTCGGATTTAAAGCATGTTTAATTGTATTTTCAGTTTTAAACATTTCATTTATGTGTTTTAAGTTTTATTTGTGTTAGTGGTGGTTATGGTATTGATGTAGTAGGGAGTTACAACCTTTACAATTCTTTTAGGTAACTTGAAGGGTTGTTTTGGAGGCTATAAATAGCCTAGCTTGTTCCCTTGGAAAAAACAGATTTGAGATTTGAGTTTTGAGATAATGAAATTTAAGCTTATTGAGCCATGAGCTTTTCCTTTGCATTTCTTGTGTTTTAGAATTGCATGCTAGAATCATTCAGGTAGCCTTGATCAAGCTATCTTGTGGAGTGGTTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATATTGATCATCAAGGTAAATCCGTTCTAACTTCTTCCTTGGGTTGACATCATCTTGATTTGGGGGTTTTAGCACTTGTGATCTAGGGGTTTGCATAACCATAAGGGTTCTTAGATCCAATTGGCTATTGTTTTCTTATCATACTCTCACTCTCAACCTACCTTGCTCTAGGATGAGAGAAATCGCAACTAAAACGATGTCCAACACCCCTAGTCAGCTTCTCAGGAGAAATGGTCGCAGTGGAGGGTTGCACTGACCTCCCGGTCGCTATTGGGGAAAATGACAACAAAGTTCGAAAGGTTGCAGAATTTTTCGTGGTTGATGGTGCGTCAGCATATAACGCAATATTAGGACGACCATATATACACGAACTGCAGGCTATCCCTTCCCATACCATCAGATGATGAAATATCCAACCCCTTATGGCGTGTGGATCATTAGAGGCGAGCAAAAGGCCTCACGAGAATGTTATGTGACGGCAATAAATGGTACTCGGACTTACGCCGTTGTCATTGGGACTACTTCATTCGAAGTGGTGCCAGGCGATGAGTCCAACAATGAACTTGGATGGTGAACGTCGAAGCAAGAACTTGAACAAATTAAACTTGGGTCTGATGAAAAGGTTGCCAGCATCGGGTGAGGGATTAAAGGTCTTGTTCGAGAAGAGTTAG

mRNA sequence

ATGCATGCTGAAGATGTACTCCGGGCAAAACATCTCCAGCATCAAACTGTATTATCTAGGCATGCAAAATCTCGAGAGCAGAGCTCGAAGCAGAAGAAAGGTCAAGCAAGTCGTGATTATGAGACAAAGAAGCCTATCCACGATAACCGATCTCGATCAGAGCGAATAGTACGAGTTCATGATCGCTATTTAAGAGAGTTCGACCGTTACACCCCACTCAACGTCCCGCGGGTACTCATCAATGGAGGGGCATCCACCAACATACTTCGCTCATTGGCTTATGTGAATGAGATTGTGAGTTTCTTGAGAGTGATGTTTTTGCGTGTAACCACGACCATGTCTCAGCAAGAGAATTATGCAAAATTTTTCCACAACATGGAGCATTTGACAAAGACGTTTCAAAGGTTGGACTCGAGACTCAAATCTATTGAAAGACAACTAACCCATCTGAAGCAAAAGAGGAGGAATAAGTCAATGCACCATAAAGAGTATTTGGAGGTCGAAGGAAGGGAACATGGTGGATGTTGCAATGCTGTCCAAAGGAGAAATCTAGGAGGAGTTCATAAAGTTGATCCTATATTGAGAAGCATCAAGGCTAAACTTCCTATGTTCCATGGAAGTACAAACCCGAAGGAATACATTCAATGGGAACAGCAAGTTGAACGTGTCTTTGATTACTACCCATTAAGTGAGGAAGTAAAGGTAAAACTCATTGTTGCTCAACTTCGAGATTATGCAATTACTTGGTGGGATAAATTGTTTTTGAGTAGGAGGAAGAACTTTGAGTGTCCAATAAACTCATGGTATGTTCTCAAGCATTTAATGAGAGAGCATTTTGTTCCCAAGTGTTTCTATAAGTTGAGATCTTTGAGACAAGGTAGCAATAGCGTGGAGGCTTACTACATGGAGATGCAAATGTTGCTTGAGGAGCTTGATCTTTATGAGGATGAGGAAGTTATAATGGCTCGTTTCTTAAGAGGACTCAAGAAGGAAATTGCCGAACGACTTGATCTTCAATTTTATGAGGATTTAGAAGGGATGGTGCAAATAGCCATAAAGATTGAGAAACATCTCCAAAGGAAGTCTACAAGGTATAATAAACCTAAACCATTTTCTAAGATTCATTTATCTTTAGAGAATTTTAGTTTACCAACTAACATTAAGCCTATTGTTGAGGTAGAAAGTGATCCAATTCAAGAAGACATAGTTTGTGACCTAGTGCCACATGCTGATAGTGTTTTATTTAGTAGGCAACTAGATTGCAATGAATTGTTTGATTGTAACACTTCTACTATTGTAACACCTACTCCTCAAGATGTATATGATGTTGTGTGTGAGTTAGGGAAAAAGGCGCATGAGGTCAAGACAAAAGCATGTGAATTGTTTGAAAAAGAATCTTGTGTGAGAGAAAAGCATGAGATTAATTTGTGGCCTAAAGAGAAAAATGAGAGAAAAGCCAAGAATGAGGCTAGAACACTCATTGAGAAGATTGAACCAAAGATTGCTTCCAAAGTACAAAATGACAGTCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAGCAAAAGTCCCAATTTGCTTCTAAATTCATTCATGGAAGGAAGTATACAATGTTCAAGCCGAGTGATTGGGTTTGGAGACACTATTGGAAGGATCGCTTTTCTTTTGGAAAGAAGTTGAAGAGGAACCCATGTAGCCTTGATCAAGCTATCTTGTGGAGTGGTTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATATTGATCATCAAGGCGATGAGTCCAACAATGAACTTGGATGGTGAACGTCGAAGCAAGAACTTGAACAAATTAAACTTGGGTCTGATGAAAAGGTTGCCAGCATCGGGTGAGGGATTAAAGGTCTTGTTCGAGAAGAGTTAG

Coding sequence (CDS)

ATGCATGCTGAAGATGTACTCCGGGCAAAACATCTCCAGCATCAAACTGTATTATCTAGGCATGCAAAATCTCGAGAGCAGAGCTCGAAGCAGAAGAAAGGTCAAGCAAGTCGTGATTATGAGACAAAGAAGCCTATCCACGATAACCGATCTCGATCAGAGCGAATAGTACGAGTTCATGATCGCTATTTAAGAGAGTTCGACCGTTACACCCCACTCAACGTCCCGCGGGTACTCATCAATGGAGGGGCATCCACCAACATACTTCGCTCATTGGCTTATGTGAATGAGATTGTGAGTTTCTTGAGAGTGATGTTTTTGCGTGTAACCACGACCATGTCTCAGCAAGAGAATTATGCAAAATTTTTCCACAACATGGAGCATTTGACAAAGACGTTTCAAAGGTTGGACTCGAGACTCAAATCTATTGAAAGACAACTAACCCATCTGAAGCAAAAGAGGAGGAATAAGTCAATGCACCATAAAGAGTATTTGGAGGTCGAAGGAAGGGAACATGGTGGATGTTGCAATGCTGTCCAAAGGAGAAATCTAGGAGGAGTTCATAAAGTTGATCCTATATTGAGAAGCATCAAGGCTAAACTTCCTATGTTCCATGGAAGTACAAACCCGAAGGAATACATTCAATGGGAACAGCAAGTTGAACGTGTCTTTGATTACTACCCATTAAGTGAGGAAGTAAAGGTAAAACTCATTGTTGCTCAACTTCGAGATTATGCAATTACTTGGTGGGATAAATTGTTTTTGAGTAGGAGGAAGAACTTTGAGTGTCCAATAAACTCATGGTATGTTCTCAAGCATTTAATGAGAGAGCATTTTGTTCCCAAGTGTTTCTATAAGTTGAGATCTTTGAGACAAGGTAGCAATAGCGTGGAGGCTTACTACATGGAGATGCAAATGTTGCTTGAGGAGCTTGATCTTTATGAGGATGAGGAAGTTATAATGGCTCGTTTCTTAAGAGGACTCAAGAAGGAAATTGCCGAACGACTTGATCTTCAATTTTATGAGGATTTAGAAGGGATGGTGCAAATAGCCATAAAGATTGAGAAACATCTCCAAAGGAAGTCTACAAGGTATAATAAACCTAAACCATTTTCTAAGATTCATTTATCTTTAGAGAATTTTAGTTTACCAACTAACATTAAGCCTATTGTTGAGGTAGAAAGTGATCCAATTCAAGAAGACATAGTTTGTGACCTAGTGCCACATGCTGATAGTGTTTTATTTAGTAGGCAACTAGATTGCAATGAATTGTTTGATTGTAACACTTCTACTATTGTAACACCTACTCCTCAAGATGTATATGATGTTGTGTGTGAGTTAGGGAAAAAGGCGCATGAGGTCAAGACAAAAGCATGTGAATTGTTTGAAAAAGAATCTTGTGTGAGAGAAAAGCATGAGATTAATTTGTGGCCTAAAGAGAAAAATGAGAGAAAAGCCAAGAATGAGGCTAGAACACTCATTGAGAAGATTGAACCAAAGATTGCTTCCAAAGTACAAAATGACAGTCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAGCAAAAGTCCCAATTTGCTTCTAAATTCATTCATGGAAGGAAGTATACAATGTTCAAGCCGAGTGATTGGGTTTGGAGACACTATTGGAAGGATCGCTTTTCTTTTGGAAAGAAGTTGAAGAGGAACCCATGTAGCCTTGATCAAGCTATCTTGTGGAGTGGTTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATATTGATCATCAAGGCGATGAGTCCAACAATGAACTTGGATGGTGAACGTCGAAGCAAGAACTTGAACAAATTAAACTTGGGTCTGATGAAAAGGTTGCCAGCATCGGGTGAGGGATTAAAGGTCTTGTTCGAGAAGAGTTAG

Protein sequence

MHAEDVLRAKHLQHQTVLSRHAKSREQSSKQKKGQASRDYETKKPIHDNRSRSERIVRVHDRYLREFDRYTPLNVPRVLINGGASTNILRSLAYVNEIVSFLRVMFLRVTTTMSQQENYAKFFHNMEHLTKTFQRLDSRLKSIERQLTHLKQKRRNKSMHHKEYLEVEGREHGGCCNAVQRRNLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQLRDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFYKLRSLRQGSNSVEAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKHLQRKSTRYNKPKPFSKIHLSLENFSLPTNIKPIVEVESDPIQEDIVCDLVPHADSVLFSRQLDCNELFDCNTSTIVTPTPQDVYDVVCELGKKAHEVKTKACELFEKESCVREKHEINLWPKEKNERKAKNEARTLIEKIEPKIASKVQNDSQHVVYKAEASREKQKSQFASKFIHGRKYTMFKPSDWVWRHYWKDRFSFGKKLKRNPCSLDQAILWSGSNLEFRNKFSLLLILIIKAMSPTMNLDGERRSKNLNKLNLGLMKRLPASGEGLKVLFEKS

Homology

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BLAST of Moc05g12830 vs. NCBI nr
Match: XP_022157414.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 3.0e-47
Identity = 106/189 (56.08%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 189 KVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQLRDYAIT 248
           +VD  L +IK KL  F+G T+P+ YIQW ++VE VFD +  SEE KV+L +AQ +DYA+T
Sbjct: 116 QVDRNLGNIKLKLXKFYGKTDPEAYIQWXKEVEFVFDCHNFSEEKKVRLCLAQFKDYAVT 175

Query: 249 WWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFY-----KLRSLRQGSNSVEAYYME 308
           WWDKL   RR+N E PI+SWY  K L+R  FVP+ F+     KL+ LRQGS SVE YY E
Sbjct: 176 WWDKLMSIRRRNLEAPIDSWYEFKELLRRRFVPRHFHRDTAQKLQVLRQGSKSVEDYYKE 235

Query: 309 MQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKHLQRKST 368
           M  L+  LDL ED E +MARFL GL KEIA+++DLQ Y ++E M+ +AIKIEK LQR+S 
Sbjct: 236 MDTLMNRLDLEEDMENLMARFLNGLNKEIADKVDLQPYFNIEEMLHLAIKIEKQLQRRSQ 295

Query: 369 RYNKPKPFS 373
            Y+  KPFS
Sbjct: 296 GYS-TKPFS 303

[Close]

BLAST of Moc05g12830 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-46
Identity = 100/189 (52.91%), Postives = 132/189 (69.84%), Query Frame = 0


Query: 197 IKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQLRDYAITWWDKLFLS 256
           IK K+P F G T+P+EYI+WE++VE VF  +  S++ KV+  VA+ +DYA TWWDKL   
Sbjct: 4   IKFKIPKFFGKTDPEEYIKWEKEVENVFACHNFSDKQKVRFCVAKFKDYAQTWWDKLTTG 63

Query: 257 RRKNFECPINSWYVLKHLMREHFVPKCF-----YKLRSLRQGSNSVEAYYMEMQMLLEEL 316
           RR+N E PI SWY  K  MR+HFVP  F      +L++LRQG+ SVE YY EM +L++ L
Sbjct: 64  RRRNLEAPIISWYEFKDSMRKHFVPNHFQRDMAQRLQALRQGNKSVEDYYKEMDILMDRL 123

Query: 317 DLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKHLQRKSTRYNKPKPF 376
           DL ED E +MARFL GL KEIA+++DLQ Y D+E M+ +AIK+EKHL  K  RY   KP 
Sbjct: 124 DLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKHLSTKRARYTSSKPS 183

Query: 377 SKIHLSLEN 381
           S ++ S +N
Sbjct: 184 SSLNSSWKN 192

[Close]

BLAST of Moc05g12830 vs. NCBI nr
Match: XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 1.4e-44
Identity = 112/267 (41.95%), Postives = 164/267 (61.42%), Query Frame = 0


Query: 114 SQQENYAKFFHNMEHLTKTFQRLDSRLKS---IERQLTHLKQKRRNKSMHHKE------Y 173
           +QQ    +    +E LT    RL+ + ++   I +          + S HH++      +
Sbjct: 18  AQQRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTPSTDTYEGDNSDHHEDNPHAVGH 77

Query: 174 LEVEGREHGGCCNAVQRRNLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVF 233
             + GR+HG   + +Q+R +    ++D  + SIK KLP F+G T+P+EY+QWE+ VE VF
Sbjct: 78  GLMRGRDHGRRYHNLQQR-VPYDDRIDRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVF 137

Query: 234 DYYPLSEEVKVKLIVAQLRDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCF 293
           + +  S++ KV L +AQ + YA  WWDKL  SRR+N E PI+SWY  K  MR+ FVP+ F
Sbjct: 138 NCHNFSDKKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWYEFKESMRKRFVPQYF 197

Query: 294 -----YKLRSLRQGSNSVEAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQ 353
                 KL++L+QG  SVE YY EM  L++ LDL ED E +MARFL GL  EIA++ DLQ
Sbjct: 198 QRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLDLDEDMEALMARFLNGLNTEIADKTDLQ 257

Query: 354 FYEDLEGMVQIAIKIEKHLQRKSTRYN 367
            Y ++E ++ IAIKIE+ +QR+S RY+
Sbjct: 258 PYSNIEELLHIAIKIERQIQRRSQRYS 283

[Close]

BLAST of Moc05g12830 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-44
Identity = 110/267 (41.20%), Postives = 163/267 (61.05%), Query Frame = 0


Query: 114 SQQENYAKFFHNMEHLTKTFQRLDSRLKSIER---QLTHLKQKRRNKSMHHKE------Y 173
           +QQ    +    +E LT    RL+ + ++ +R             + S HH++      +
Sbjct: 18  AQQRTMKRLIRGIEELTDRIGRLEIQNQARQRIPLPAPSTDTYEGDNSDHHEDNPHAVGH 77

Query: 174 LEVEGREHGGCCNAVQRRNLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVF 233
             + GR+HG   + +Q+R +    ++D  + SIK KLP F+G T+P+EY++WE+ +E VF
Sbjct: 78  GLMRGRDHGRRYHNLQQR-VPYDDRIDRNVGSIKLKLPKFYGKTDPEEYLEWEKTIESVF 137

Query: 234 DYYPLSEEVKVKLIVAQLRDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCF 293
             +  S++ KV L +AQ + YA  WWDKL  SRR+N E PI+SWY  K  MR+ FVP+ F
Sbjct: 138 KCHNFSDKKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWYEFKESMRKRFVPQYF 197

Query: 294 -----YKLRSLRQGSNSVEAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQ 353
                 KL++L+QG  SVE YY EM  L++ LDL ED E +MARFL GL  EIA++ DLQ
Sbjct: 198 QRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLDLDEDMEALMARFLNGLNTEIADKTDLQ 257

Query: 354 FYEDLEGMVQIAIKIEKHLQRKSTRYN 367
            Y ++E ++ IAIKIE+ +QR+S RY+
Sbjct: 258 PYSNIEELLHIAIKIERQIQRRSQRYS 283

[Close]

BLAST of Moc05g12830 vs. NCBI nr
Match: XP_022152309.1 (uncharacterized protein LOC111020057 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 2.6e-43
Identity = 103/215 (47.91%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 180 QRRNLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIV 239
           QRR      +VD  L SIK K+  F G T+P+EY+QWE +VE VF  +  SEE K++L V
Sbjct: 55  QRRAPREEAQVDRNLGSIKLKIQKFFGKTDPEEYLQWENEVESVFVCHNFSEEKKIQLFV 114

Query: 240 AQLRDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCF-----YKLRSLRQGS 299
           A+ + YA TWWDKL   RR+N E PI SWY     ++E FVPK F      KL++LRQG+
Sbjct: 115 ARFKQYAQTWWDKLMSRRRRNLEAPIVSWYEFNESLKERFVPKHFERDMAQKLQALRQGN 174

Query: 300 NSVEAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKI 359
            SVE YY E+  L++ +DL ED + +MARFL  L KEIA+++DLQ Y D+E M+ +AIKI
Sbjct: 175 KSVEDYYKEIDTLMDRIDLDEDMKQLMARFLNDLNKEIADKVDLQPYFDIEEMLHLAIKI 234

Query: 360 EKHLQRKSTRYNKPKPFSKIHLSLENFSLPTNIKP 390
           E+ +QRKS RY+  K FS    + +  S  +++ P
Sbjct: 235 ERQIQRKSQRYSS-KQFSNSSATWKKDSKNSDVYP 268

[Close]

BLAST of Moc05g12830 vs. ExPASy TrEMBL
Match: A0A6J1DWE9 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia OX=3673 GN=LOC111024115 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-47
Identity = 106/189 (56.08%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 189 KVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQLRDYAIT 248
           +VD  L +IK KL  F+G T+P+ YIQW ++VE VFD +  SEE KV+L +AQ +DYA+T
Sbjct: 116 QVDRNLGNIKLKLXKFYGKTDPEAYIQWXKEVEFVFDCHNFSEEKKVRLCLAQFKDYAVT 175

Query: 249 WWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFY-----KLRSLRQGSNSVEAYYME 308
           WWDKL   RR+N E PI+SWY  K L+R  FVP+ F+     KL+ LRQGS SVE YY E
Sbjct: 176 WWDKLMSIRRRNLEAPIDSWYEFKELLRRRFVPRHFHRDTAQKLQVLRQGSKSVEDYYKE 235

Query: 309 MQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKHLQRKST 368
           M  L+  LDL ED E +MARFL GL KEIA+++DLQ Y ++E M+ +AIKIEK LQR+S 
Sbjct: 236 MDTLMNRLDLEEDMENLMARFLNGLNKEIADKVDLQPYFNIEEMLHLAIKIEKQLQRRSQ 295

Query: 369 RYNKPKPFS 373
            Y+  KPFS
Sbjct: 296 GYS-TKPFS 303

[Close]

BLAST of Moc05g12830 vs. ExPASy TrEMBL
Match: A0A6J1DFN2 (uncharacterized protein LOC111020057 OS=Momordica charantia OX=3673 GN=LOC111020057 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-43
Identity = 103/215 (47.91%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 180 QRRNLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIV 239
           QRR      +VD  L SIK K+  F G T+P+EY+QWE +VE VF  +  SEE K++L V
Sbjct: 55  QRRAPREEAQVDRNLGSIKLKIQKFFGKTDPEEYLQWENEVESVFVCHNFSEEKKIQLFV 114

Query: 240 AQLRDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCF-----YKLRSLRQGS 299
           A+ + YA TWWDKL   RR+N E PI SWY     ++E FVPK F      KL++LRQG+
Sbjct: 115 ARFKQYAQTWWDKLMSRRRRNLEAPIVSWYEFNESLKERFVPKHFERDMAQKLQALRQGN 174

Query: 300 NSVEAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKI 359
            SVE YY E+  L++ +DL ED + +MARFL  L KEIA+++DLQ Y D+E M+ +AIKI
Sbjct: 175 KSVEDYYKEIDTLMDRIDLDEDMKQLMARFLNDLNKEIADKVDLQPYFDIEEMLHLAIKI 234

Query: 360 EKHLQRKSTRYNKPKPFSKIHLSLENFSLPTNIKP 390
           E+ +QRKS RY+  K FS    + +  S  +++ P
Sbjct: 235 ERQIQRKSQRYSS-KQFSNSSATWKKDSKNSDVYP 268

[Close]

BLAST of Moc05g12830 vs. ExPASy TrEMBL
Match: A0A2N9HCS9 (Retrotrans_gag domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37610 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.9e-41
Identity = 101/263 (38.40%), Postives = 151/263 (57.41%), Query Frame = 0


Query: 183 NLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQL 242
           NLGG   VD  L SIK K+P F G+T+P+ Y++WE+++E +FD +  SEE KVKL V + 
Sbjct: 61  NLGGRDGVDKNLGSIKMKIPSFQGTTDPEVYLEWEKKIELMFDCHNYSEEKKVKLAVIEF 120

Query: 243 RDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFY-----KLRSLRQGSNSV 302
            DYAI WWD+L  +RR+N+E P+ +W  LK LMR  FVP  +Y     KL++L QGS SV
Sbjct: 121 TDYAIIWWDQLVTNRRRNYEKPVETWGELKALMRRRFVPSHYYRNLYQKLQNLTQGSRSV 180

Query: 303 EAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKH 362
           E Y+ EM++ +   ++ ED E  MARF  GL ++IA  ++LQ Y ++E MV +A+K+E+ 
Sbjct: 181 EDYHKEMEVAMIRANVEEDREATMARFFSGLNRDIANVIELQHYVEIEDMVHMAMKVERQ 240

Query: 363 LQRKSTRYNKPKPFSKIHLSLENFSLPTNIKPIVEVESD-----PIQ------------- 418
           L+RK T            +  E+      +  +V+   D     P+              
Sbjct: 241 LKRKGTARQVMIMRDNGEVMTESEDDSDGVPELVDASDDNGVVYPVTGESLVARRALNTH 300

[Close]

BLAST of Moc05g12830 vs. ExPASy TrEMBL
Match: A0A2N9GVR3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31343 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 91/186 (48.92%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 183 NLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQL 242
           NLGG   VD  L SIK K+P F G T+P+ Y++WE++++ VFD +  SEE KVKL V + 
Sbjct: 101 NLGGRDGVDRNLGSIKMKIPSFQGRTDPEVYLEWEKKIDLVFDCHNYSEEKKVKLAVIEF 160

Query: 243 RDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFY-----KLRSLRQGSNSV 302
            DYAI WWD+L  +RR+N E P+ +W  LK LMR  FVP  FY     KL++L QGS SV
Sbjct: 161 TDYAIIWWDQLVTNRRRNNERPVETWGELKALMRRRFVPSHFYRDLYQKLQNLTQGSRSV 220

Query: 303 EAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKH 362
           E Y+ EM++ +   ++ ED E  MARFL GL ++IA  ++LQ Y ++E MV +A+K+E+ 
Sbjct: 221 EDYHKEMEVAMIRANVEEDREATMARFLSGLNRDIANVIELQHYVEIEDMVHMAMKVERQ 280

Query: 363 LQRKST 364
           L+RK T
Sbjct: 281 LKRKGT 286

[Close]

BLAST of Moc05g12830 vs. ExPASy TrEMBL
Match: A0A2N9G1C9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21244 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 91/186 (48.92%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 183 NLGGVHKVDPILRSIKAKLPMFHGSTNPKEYIQWEQQVERVFDYYPLSEEVKVKLIVAQL 242
           NLGG   VD  L SIK K+P F G T+P+ Y++WE++++ VFD +  SEE KVKL V + 
Sbjct: 101 NLGGRDGVDRNLGSIKMKIPSFQGRTDPEVYLEWEKKIDLVFDCHNYSEEKKVKLAVIEF 160

Query: 243 RDYAITWWDKLFLSRRKNFECPINSWYVLKHLMREHFVPKCFY-----KLRSLRQGSNSV 302
            DYAI WWD+L  +RR+N E P+ +W  LK LMR  FVP  FY     KL++L QGS SV
Sbjct: 161 TDYAIIWWDQLVTNRRRNNERPVETWGELKALMRRRFVPSHFYRDLYQKLQNLTQGSRSV 220

Query: 303 EAYYMEMQMLLEELDLYEDEEVIMARFLRGLKKEIAERLDLQFYEDLEGMVQIAIKIEKH 362
           E Y+ EM++ +   ++ ED E  MARFL GL ++IA  ++LQ Y ++E MV +A+K+E+ 
Sbjct: 221 EDYHKEMEVAMIRANVEEDREATMARFLSGLNRDIANVIELQHYVEIEDMVHMAMKVERQ 280

Query: 363 LQRKST 364
           L+RK T
Sbjct: 281 LKRKGT 286

The following BLAST results are available for this feature:

BLAST of Moc05g12830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157414.1	3.0e-47	56.08	LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]	[more]
XP_038887118.1	1.1e-46	52.91	uncharacterized protein K02A2.6-like [Benincasa hispida]	[more]
XP_023520835.1	1.4e-44	41.95	LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp....	[more]
XP_023553652.1	6.8e-44	41.20	uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]	[more]
XP_022152309.1	2.6e-43	47.91	uncharacterized protein LOC111020057 [Momordica charantia]	[more]

BLAST of Moc05g12830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g12830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWE9	1.4e-47	56.08	LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia...	[more]
A0A6J1DFN2	1.3e-43	47.91	uncharacterized protein LOC111020057 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A2N9HCS9	9.9e-41	38.40	Retrotrans_gag domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU...	[more]
A0A2N9GVR3	1.3e-40	48.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31343 PE=4 SV=1	[more]
A0A2N9G1C9	1.3e-40	48.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21244 PE=4 SV=1	[more]

BLAST of Moc05g12830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..153
None	No IPR available	COILS	Coil	Coil	coord: 297..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..53
None	No IPR available	PANTHER	PTHR35046	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 152..396
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 237..329 e-value: 1.9E-13 score: 50.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g12830.1	Moc05g12830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding