Moc05g11130 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g11130
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 8691306 .. 8691587 (-)
RNA-Seq ExpressionMoc05g11130
SyntenyMoc05g11130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAATGGTAGAAGGGCAAGGTCACGATGGCCTAGCAACAGAACCCCTCCGCAGATCAGCACAAATCACCGCGCCTGTCCTACCACCTGCGCACCCCGCAAGGACATCCAAGGCCACCCGTGGCCAAGGTGGAACCTCTAAGAAGGGCTCCCGGGGTCCAGCCCCGGCCCCGACAAGCGAGAACTTGGACGCACTCTAG

mRNA sequence

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAATGGTAGAAGGGCAAGGTCACGATGGCCTAGCAACAGAACCCCTCCGCAGATCAGCACAAATCACCGCGCCTGTCCTACCACCTGCGCACCCCGCAAGGACATCCAAGGCCACCCGTGGCCAAGGTGGAACCTCTAAGAAGGGCTCCCGGGGTCCAGCCCCGGCCCCGACAAGCGAGAACTTGGACGCACTCTAG

Coding sequence (CDS)

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAATGGTAGAAGGGCAAGGTCACGATGGCCTAGCAACAGAACCCCTCCGCAGATCAGCACAAATCACCGCGCCTGTCCTACCACCTGCGCACCCCGCAAGGACATCCAAGGCCACCCGTGGCCAAGGTGGAACCTCTAAGAAGGGCTCCCGGGGTCCAGCCCCGGCCCCGACAAGCGAGAACTTGGACGCACTCTAG

Protein sequence

MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHPARTSKATRGQGGTSKKGSRGPAPAPTSENLDAL
Homology
BLAST of Moc05g11130 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-20
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQP +STNT DRR L A+D HQREVGA +VEGQ H+GL TEP  RSA+IT P L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 ARTSKATRGQGGTSKKGSRGPAPAPTSENLDAL 94
           +  KA RG+GG S++ + G APAP+ EN DAL
Sbjct: 61 -KPFKANRGRGGASRRTTLGAAPAPSRENFDAL 92

BLAST of Moc05g11130 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 8.8e-17
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQPANSTNTADRR LAA+  HQREVGA +VEGQGH+ L TEPL RSA+IT PVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 ARTSKA 67
           + SKA
Sbjct: 61 -KPSKA 65

BLAST of Moc05g11130 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQP  S NTA+RR L  ++  Q E+ A + E Q   G   +P RRS +    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 ARTSKATRGQGG 73
           R+ KA RG+GG
Sbjct: 61 -RSGKANRGRGG 71

BLAST of Moc05g11130 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.9e-21
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQP +STNT DRR L A+D HQREVGA +VEGQ H+GL TEP  RSA+IT P L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 ARTSKATRGQGGTSKKGSRGPAPAPTSENLDAL 94
           +  KA RG+GG S++ + G APAP+ EN DAL
Sbjct: 61 -KPFKANRGRGGASRRTTLGAAPAPSRENFDAL 92

BLAST of Moc05g11130 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQPANSTNTADRR LAA+  HQREVGA +VEGQGH+ L TEPL RSA+IT PVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 ARTSKA 67
           + SKA
Sbjct: 61 -KPSKA 65

BLAST of Moc05g11130 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAMVEGQGHDGLATEPLRRSAQITAPVLPPAHP 60
          MVQP  S NTA+RR L  ++  Q E+ A + E Q   G   +P RRS +    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 ARTSKATRGQGG 73
           R+ KA RG+GG
Sbjct: 61 -RSGKANRGRGG 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159327.11.0e-2063.44uncharacterized protein LOC111025738 [Momordica charantia][more]
XP_022152854.18.8e-1777.27uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022156638.13.5e-0547.22uncharacterized protein LOC111023488 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DZJ14.9e-2163.44uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DHB34.2e-1777.27uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DR601.7e-0547.22uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g11130.1Moc05g11130.1mRNA