Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATATCGCCCTCGAAACGAGTCCAAAATTCACTATCAAACTCGCCCGAGTTCGACTCAGCCTGCGACTCGACCTTCTCCCACTGCCTTTCTCAGACGCAGCACGCATACGACGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGCCCACCTCCACCGCCTCCTCACCGCCGTCCGGCCCCATCCTCTCATACTCAAGTGGCTCCCGTCTCCCCCGACTCGCCTCCAGGTCGACTCGGCCCTCCGAGTCATCAAGCGCGCCGACTCGGACCGCGACGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCGATCGAACTGTTTGCAGAGGCTGTGGCGGAGAACGTCGGAAGAGAGGTTCTGTTTCGAATCCCGGTCGGAGCCGCCGGAATCGCCGGACTCGGCGCCGTGACTCGGGCCGGGAAGAACCTGGTTGGGACTGTGGTTGCAGCGTACGCGTTTGGTGTTGCGGCTTCCGTATACCTGAGCTTGTCTGAGTAG
mRNA sequence
ATGGGGATATCGCCCTCGAAACGAGTCCAAAATTCACTATCAAACTCGCCCGAGTTCGACTCAGCCTGCGACTCGACCTTCTCCCACTGCCTTTCTCAGACGCAGCACGCATACGACGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGCCCACCTCCACCGCCTCCTCACCGCCGTCCGGCCCCATCCTCTCATACTCAAGTGGCTCCCGTCTCCCCCGACTCGCCTCCAGGTCGACTCGGCCCTCCGAGTCATCAAGCGCGCCGACTCGGACCGCGACGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCGATCGAACTGTTTGCAGAGGCTGTGGCGGAGAACGTCGGAAGAGAGGTTCTGTTTCGAATCCCGGTCGGAGCCGCCGGAATCGCCGGACTCGGCGCCGTGACTCGGGCCGGGAAGAACCTGGTTGGGACTGTGGTTGCAGCGTACGCGTTTGGTGTTGCGGCTTCCGTATACCTGAGCTTGTCTGAGTAG
Coding sequence (CDS)
ATGGGGATATCGCCCTCGAAACGAGTCCAAAATTCACTATCAAACTCGCCCGAGTTCGACTCAGCCTGCGACTCGACCTTCTCCCACTGCCTTTCTCAGACGCAGCACGCATACGACGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGCCCACCTCCACCGCCTCCTCACCGCCGTCCGGCCCCATCCTCTCATACTCAAGTGGCTCCCGTCTCCCCCGACTCGCCTCCAGGTCGACTCGGCCCTCCGAGTCATCAAGCGCGCCGACTCGGACCGCGACGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCGATCGAACTGTTTGCAGAGGCTGTGGCGGAGAACGTCGGAAGAGAGGTTCTGTTTCGAATCCCGGTCGGAGCCGCCGGAATCGCCGGACTCGGCGCCGTGACTCGGGCCGGGAAGAACCTGGTTGGGACTGTGGTTGCAGCGTACGCGTTTGGTGTTGCGGCTTCCGTATACCTGAGCTTGTCTGAGTAG
Protein sequence
MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
Homology
BLAST of Moc05g10280 vs. NCBI nr
Match:
XP_022145868.1 (uncharacterized protein LOC111015217 [Momordica charantia])
HSP 1 Score: 330.5 bits (846), Expect = 8.6e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV
Sbjct: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG
Sbjct: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
Query: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE 170
REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
Sbjct: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE 169
BLAST of Moc05g10280 vs. NCBI nr
Match:
XP_023539875.1 (uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 268.9 bits (686), Expect = 3.1e-68
Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL TQHAY GVFPYQLC AA HLHRLLT V
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLGPIRFKRWAIELFAEAVAENV 120
RPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLGPIRFKRWAIELFAEAV +NV
Sbjct: 61 RPHPLISKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAIELFAEAVVKNV 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
+EV+FR+PVG AGIAG+GAVTR+GK+LVGT++A YA GVA S+YL LS
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMIAVYALGVATSMYLGLS 169
BLAST of Moc05g10280 vs. NCBI nr
Match:
XP_022932745.1 (uncharacterized protein LOC111439202 [Cucurbita moschata])
HSP 1 Score: 268.5 bits (685), Expect = 4.0e-68
Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL TQHAY GVFPYQLC AA HLHRLLT V
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLGPIRFKRWAIELFAEAVAENV 120
RPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
+EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLS 169
BLAST of Moc05g10280 vs. NCBI nr
Match:
KAG7029126.1 (hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 268.5 bits (685), Expect = 4.0e-68
Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL TQHAY GVFPYQLC AA HLHRLLT V
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLGPIRFKRWAIELFAEAVAENV 120
RPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
+EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLS 169
BLAST of Moc05g10280 vs. NCBI nr
Match:
XP_038878178.1 (uncharacterized protein LOC120070324 [Benincasa hispida])
HSP 1 Score: 267.7 bits (683), Expect = 6.8e-68
Identity = 133/168 (79.17%), Postives = 149/168 (88.69%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSL+NS EFD AC+STFSHCL+ TQHAYDGVFPYQLCAAA HLH L+T V
Sbjct: 1 MGISASKRVRNSLTNSLEFDLACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLITVV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
RPHPLI WLPSPPTRLQVDSALR + R DSDR+ ETLGPIRFK WAIELFAEAVA+NVG
Sbjct: 61 RPHPLIANWLPSPPTRLQVDSALRAVNRDDSDREGETLGPIRFKHWAIELFAEAVAKNVG 120
Query: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
++V+ R+PVG AGIAG+GAVTR+GK++VGTVVA YA GVA SVYLSLS
Sbjct: 121 KKVMLRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLS 168
BLAST of Moc05g10280 vs. ExPASy TrEMBL
Match:
A0A6J1CX41 (uncharacterized protein LOC111015217 OS=Momordica charantia OX=3673 GN=LOC111015217 PE=4 SV=1)
HSP 1 Score: 330.5 bits (846), Expect = 4.1e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV
Sbjct: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG
Sbjct: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
Query: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE 170
REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
Sbjct: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE 169
BLAST of Moc05g10280 vs. ExPASy TrEMBL
Match:
A0A6J1F2Z4 (uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC111439202 PE=4 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL TQHAY GVFPYQLC AA HLHRLLT V
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLGPIRFKRWAIELFAEAVAENV 120
RPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
+EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLS 169
BLAST of Moc05g10280 vs. ExPASy TrEMBL
Match:
A0A6J1I3X0 (uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 3.7e-67
Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL TQHAY GVFPYQLC AA HLHRLLT V
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLGPIRFKRWAIELFAEAVAENV 120
RPHPLI KWLPSPPTRLQVDSAL+ + R D+ R D+ETLGPIRFK WAIELFAEAV +NV
Sbjct: 61 RPHPLISKWLPSPPTRLQVDSALQAVNRGDAGREDEETLGPIRFKHWAIELFAEAVVKNV 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
+EV+FR+PVG AGIAG+GAVTR+GK+LVG++VA YA GVA S+YL LS
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVGSMVAVYALGVATSMYLGLS 169
BLAST of Moc05g10280 vs. ExPASy TrEMBL
Match:
A0A0A0KVZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011030 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV+NSL+NS EFDSAC+STFSHCL+ TQHAY+GVFPYQLC AA HLH LLT V
Sbjct: 34 MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 93
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
+PHPLI WLPSPPTRLQVDSALR + R DSDR+DE LG I F RWAIELFAEAV +NVG
Sbjct: 94 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 153
Query: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
++V+ R+PVG AGIAG+GAVTR+GK++VGTVVA YA GVA SVYLSLS
Sbjct: 154 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLS 201
BLAST of Moc05g10280 vs. ExPASy TrEMBL
Match:
A0A5D3D2N6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001950 PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 5.8e-65
Identity = 126/168 (75.00%), Postives = 147/168 (87.50%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MG+S SKRV+NSL+NSPEFDSAC+STFSHCL+ TQHAY+GVFPYQLC AA HLH LLT V
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
+PHPLI WLPSPPTRLQVDSALR + R DSD + ETLG IRF+RWAIELFAEAV +NVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS 169
++V+ R+P+G AGIAG+GAVTR+GK++VG VVA YA GVA S+YLSLS
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVGAVVAVYALGVATSIYLSLS 168
BLAST of Moc05g10280 vs. TAIR 10
Match:
AT2G43540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 186.0 bits (471), Expect = 2.4e-47
Identity = 98/170 (57.65%), Postives = 125/170 (73.53%), Query Frame = 0
Query: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
MGIS SKRV LSNSPEFDSACDS + LS QHA+ GV PYQL +AAAH+HR L+A+
Sbjct: 1 MGISGSKRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSAL 60
Query: 61 RPHPLILKWLPSPPTRLQVDSALRV-IKRADSDRDDETLGPIRFKRWAIELFAEAVAENV 120
R PLI +WL SPP++ QVDSALRV + R + ++E LG FK+WA+E+FAEAV N
Sbjct: 61 R-FPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNA 120
Query: 121 GREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE 170
+ + RIP+G GI G+GAVTR+G+NL+G + YA GVA SV+LSL++
Sbjct: 121 RKTIASRIPLGIVGIGGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLTD 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022145868.1 | 8.6e-87 | 100.00 | uncharacterized protein LOC111015217 [Momordica charantia] | [more] |
XP_023539875.1 | 3.1e-68 | 79.29 | uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo] | [more] |
XP_022932745.1 | 4.0e-68 | 79.29 | uncharacterized protein LOC111439202 [Cucurbita moschata] | [more] |
KAG7029126.1 | 4.0e-68 | 79.29 | hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038878178.1 | 6.8e-68 | 79.17 | uncharacterized protein LOC120070324 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CX41 | 4.1e-87 | 100.00 | uncharacterized protein LOC111015217 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A6J1F2Z4 | 1.9e-68 | 79.29 | uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC1114392... | [more] |
A0A6J1I3X0 | 3.7e-67 | 78.11 | uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752... | [more] |
A0A0A0KVZ1 | 2.0e-65 | 76.79 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011030 PE=4 SV=1 | [more] |
A0A5D3D2N6 | 5.8e-65 | 75.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT2G43540.1 | 2.4e-47 | 57.65 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |