Moc05g09720 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g09720
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 7563896 .. 7564398 (+)
RNA-Seq ExpressionMoc05g09720
SyntenyMoc05g09720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATGTATGGTCTGTGGCTTAGTCATTTCGACATTTTGAAGAGTTATCAGGCACAGAATTGGAGATGACACCCACCTGCAATCTCTTGGGATGACTCTTTATCTCTGTTTCATCTTGGATCAGAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGGTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

mRNA sequence

ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGGTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

Coding sequence (CDS)

ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGGTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

Protein sequence

MFGDDLSSPLVSVMVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSNGKEDGAIGGQRRRCSGNRSNTILEYGDGIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIISVPIVNKDVMHHF
Homology
[Close]
BLAST of Moc05g09720 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 6.2e-05
Identity = 45/119 (37.82%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 14  MVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSN-----------------GKEDGAI 73
           M D   +  ISPLD +  VVV KIK N+V+  PW                    ++ G  
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 74  GGQRRRCSGNRSNTILEYGDGIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIIS 116
           GG     +  +SNT+L   + I LN ++I  QHD GNL N SL V VE+ K T + IIS
Sbjct: 61  GG----AATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVED-KTTFDTIIS 114

[Close]
BLAST of Moc05g09720 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-05
Identity = 45/119 (37.82%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 14  MVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSN-----------------GKEDGAI 73
           M D   +  ISPLD +  VVV KIK N+V+  PW                    ++ G  
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 74  GGQRRRCSGNRSNTILEYGDGIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIIS 116
           GG     +  +SNT+L   + I LN ++I  QHD GNL N SL V VE+ K T + IIS
Sbjct: 61  GG----AATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVED-KTTFDTIIS 114

The following BLAST results are available for this feature:
BLAST of Moc05g09720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.16.2e-0537.82uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of Moc05g09720 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g09720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ23.0e-0537.82uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of Moc05g09720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g09720.1Moc05g09720.1mRNA