Moc04g28400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g28400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 21006941 .. 21007724 (-)
RNA-Seq Expression	Moc04g28400
Synteny	Moc04g28400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTTTCGACGACGAAATGTAGTTTCGTCTCCGAAAGTGTTCACTTTCGGAGACGAAATAAGTCTTTCGTCGCTGAAAGTGAACACTTTCAACGACGAAATTTAATTTCGTCCCCGAAAGTGACTCTTTCAGCAACGAAATCTAATTTCGTCACCGAAAGTGGACACTTTCGGAGACGAAATCAGTTTTCGTCTCCGAAAGTCCAATCTTGGCTGACTTTCGGCGACGACTTTTACAAATCGTCGTTGAAAGTTGTACCTTTCAGCGACGACTTTTATACATCGTCGCCGAAAGGGGAGCATCAGCGACGAATTTTAAATTCGTCGCCAAAGGTTAGGCGGCAAAAAAGCTGCCATTTTTTCGCTAAAGTTTCGGCGACGACATTTTCGACCTTCGACGACCAAATTAATTTCATCGCTGAAAGTCACCCAAAATCCCCAAATCCCTATCTCTTCTTTCATTTCGCGATTTCAGAACAAAACAGCCCCCCCCCCCCTCGCATCGTCTGCTCCGCCGCCGAGAAGTCACCAGCTTCCGTCTGCCGCCAACGTCGGACGACGCGTCCGGTCTGCCGCCTTCGCCCGCCGACACGTCCGGTCTGCCGCCTTCAGCCGACGACGCGTCCCGTCAGTGCCTCCGCCCAAAAAGAGACCTCGCATCGCCCCCCTTGCATTGTCCGCCCCTTCCCCTTGCGCTGTCCGCCCCTCGTACCGTCCAACATCGACGACGCCTTCCGTCTGCAACGGCCAACACGTTCCGTCCGCCACCGCCGCCACCTGA

mRNA sequence

ATGTCACTTTCGACGACGAAATGTAGTTTCGTCTCCGAAAGTGTTCACTTTCGGAGACGAAATAAGTCTTTCGTCGCTGAAAGTGAACACTTTCAACGACGAAATTTAATTTCGTCCCCGAAAGTGACTCTTTCAGCAACGAAATCTAATTTCGTCACCGAAAGTGGACACTTTCGGAGACGAAATCAGTTTTCGTCTCCGAAAGTCCAATCTTGGCTGACTTTCGGCGACGACTTTTACAAATCGTCGTTGAAAGTTGTACCTTTCAGCGACGACTTTTATACATCGTCGCCGAAAGGGGAGCATCAGCGACGAATTTTAAATTCGTCGCCAAAGAACAAAACAGCCCCCCCCCCCCTCGCATCGTCTGCTCCGCCGCCGAGAAGTCACCAGCTTCCGTCTGCCGCCAACGTCGGACGACGCGTCCGGTCTGCCGCCTTCGCCCGCCGACACGTCCGGTCTGCCGCCTTCAGCCGACGACGCGTCCCGTCAGTGCCTCCGCCCAAAAAGAGACCTCGCATCGCCCCCCTTGCATTGTCCGCCCCTTCCCCTTGCGCTGTCCGCCCCTCGTACCGTCCAACATCGACGACGCCTTCCGTCTGCAACGGCCAACACGTTCCGTCCGCCACCGCCGCCACCTGA

Coding sequence (CDS)

ATGTCACTTTCGACGACGAAATGTAGTTTCGTCTCCGAAAGTGTTCACTTTCGGAGACGAAATAAGTCTTTCGTCGCTGAAAGTGAACACTTTCAACGACGAAATTTAATTTCGTCCCCGAAAGTGACTCTTTCAGCAACGAAATCTAATTTCGTCACCGAAAGTGGACACTTTCGGAGACGAAATCAGTTTTCGTCTCCGAAAGTCCAATCTTGGCTGACTTTCGGCGACGACTTTTACAAATCGTCGTTGAAAGTTGTACCTTTCAGCGACGACTTTTATACATCGTCGCCGAAAGGGGAGCATCAGCGACGAATTTTAAATTCGTCGCCAAAGAACAAAACAGCCCCCCCCCCCCTCGCATCGTCTGCTCCGCCGCCGAGAAGTCACCAGCTTCCGTCTGCCGCCAACGTCGGACGACGCGTCCGGTCTGCCGCCTTCGCCCGCCGACACGTCCGGTCTGCCGCCTTCAGCCGACGACGCGTCCCGTCAGTGCCTCCGCCCAAAAAGAGACCTCGCATCGCCCCCCTTGCATTGTCCGCCCCTTCCCCTTGCGCTGTCCGCCCCTCGTACCGTCCAACATCGACGACGCCTTCCGTCTGCAACGGCCAACACGTTCCGTCCGCCACCGCCGCCACCTGA

Protein sequence

MSLSTTKCSFVSESVHFRRRNKSFVAESEHFQRRNLISSPKVTLSATKSNFVTESGHFRRRNQFSSPKVQSWLTFGDDFYKSSLKVVPFSDDFYTSSPKGEHQRRILNSSPKNKTAPPPLASSAPPPRSHQLPSAANVGRRVRSAAFARRHVRSAAFSRRRVPSVPPPKKRPRIAPLALSAPSPCAVRPSYRPTSTTPSVCNGQHVPSATAAT

Homology

The following BLAST results are available for this feature:

BLAST of Moc04g28400 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g28400 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g28400 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g28400 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g28400.1	Moc04g28400.1	mRNA