Moc04g08560 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g08560
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein FAR-RED ELONGATED HYPOCOTYL 3-like
Location	chr4: 6169309 .. 6172215 (+)
RNA-Seq Expression	Moc04g08560
Synteny	Moc04g08560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCACCTATACGTACTGTCAACCCGCCATCTTCTGTACAATTTATGACTCCATTGACGGATAATGTTGTCCCATGCAATTTAGGCAAAGATGAACAAGAACACTTCAGTCAGTGGGATGATGTCGGAGGTGATGAGGACCATGAGTATGAGGATGAGGATGATGGTTACATAGGAACTGAGAATGAGGATGATGATTACATAGAAACTGAGAATAAGGAATGAATCTGATGACCTAGTTTGTGGCAGTGATCTATCCTCTAGAACACCTGTTGTTGAATTACAGTCTGTAAGTAGGAATGTCCTTTGTGCAACTACTAATAGTCAGCATGCATCCTTAGAACATATCGATAAAATTTGTAATAAGGATGATTTTATTGACGACATTGTAATTGGTAGTGTTTTTCGATCTAATGATGAATTACAATTTAAACTGGACGTTTTTGCTATCAATAGGAATTCTGAGTACAATGTTAAGAAATCTACTACAAAGCTATTATCTATACCATGCACGGAAGAGGGATGCAAATGGGCCCTACGTGCAAGAAGAATCAAAGGTTCGGATACCTTTCTCATCTCAACATTTTCTGAGAATCATAGTTGCGAACGACCGACACTTACACATGACAATCGACAAGCCGGTAGTTCGGTGGTGGGTCAGTTGATAAAGTCCAACTTTGAGGAGGTCAGCTGTCGTTACAAGCCTAAAGATATTATGAATGATATGCGAAAGAATTATGGTGTCAATGTCCGATATGAAAAGGCATGGTGAGCAAAAGAAGTCGCATTAGGCCTATTGATGAGATTGCCTAAAGAGTCGTACTATACTCTAAGTATAGAGAGGCTATGAAGACCGTGAATCAAGGAACAGTTTTCCACATGAAATTGGAGGACGACACATTCTTCAAGTACACATTCATGACCTTGGGATGCTCGATTAAGGGTTTTGGAAGTTGCATACGACCTATACTTATGATTGACGGGCACATCTGAAGGGGAAGTACAAGGGTTTGGTTTTTCGAGCGGGTTAAGATTTGTATAGGTGACATAAACGGTTTGGTTTTTGTATTTGACCGGCATCAAAGTATCACAAACTCCATGGTAACGGTGTTTCCTGATGCAACGCACGTCACATGTATGCATCATGTAGTGATGAAATTGAATGAGAGGTTTAGAAACGAGGGAATGTAAAAACTTTTCTATAAAGTAGCAAAGGTGTTCATGGTATCAAAGTTTCGCTACTATTGAGGCAAACTAACCGGATTCCCAAGAGTCTATAAATATTTGGAAGACATCAGATTCAACAAGTGGGCTCGTGCATATCAACCTGGAATGAGGTATAACCAAATGACCTCAAATCTTGCCAAATCCATGAATGCGATACTTGTTCATGCTCGTACTTTGCCAATAACAGCTCTGAAAATTGTCGAGCTCTATTACAACAATGGTTTTATGAGAGGCGGACAGCTGCCTCTAGTCGAGGAACAATTCTTACTAAATATGCAGATGATATTCTTAAAGAAGAGGCAGAATAAGCTCGATATCATCATGTCAGGCCAATTGATCGGTTCAAATTCAAAGTGCATGATGGTACGTCCAAGGTAAGTGTCAACCTGAATAGCAAGACCTGTACATGTAAACAATTTGACTATTTCGAGATTCCATTCTCTCACGCCATTAATGAGGCAGTTTTTCGAAACATTAGAGTGAATTCATTAGGTTCCAATAGGTACCGAATCGAAACCCTCATACTTGGTTACGTCGAATCCGTGTATCCACTCGGAGATGAGGAAGATTAGATTTTACTCGATGAATACGTGTCGAAGACGATTAAGCCACCAAAATTTGTTTCTCGTGTTGGACGTCGCCAAACTGTGTGAATACCATCAGTCGGGGAAGTCCGACAGTTACACAAATGCGGGCGATGTGGAAACGTTGGACACAACCGTAAGATGTGTAGGCAGCTGCTCCGAACAAAATGATATGGTTGTTATTGAATTTTGTTTTATTATAGTCGGAACTATGTGTGCTATGTAAATACTACTACATTATGGTTTTGCTGGCATTCAAATTATGTATTTTGTAGGTTCATTTCGGATTGCAAAAGAAATAGACTAGGTCAAGAATAATGCTTTTCAAATTCTGTCATAATTATCGGGCTCTATCTCGAGCGTGGTAGACCCCGATGTTGGCTCATTTTTTGGTTCTGTCAAAATTTTGGTTCAATCTCGGGCGAGTTGAAGCCCAAGGTTGGGTCATTTTCAGGTTCTGTCAAAATTCTCGGGCTTGATCTCGGGTGAGGTTGAACCAAAAGTTGGCATATTTTCACGTATTTCCATAATTCTCGACCAAATTATACTCGACCCCGACCGTAAAATTCAATGAGCTAAGAAAATAGAGATTCAATGATTAAATAGTTCGTACACTTGATTATTTCCGATAATAAAGTGATTACTAAATGATTACCAAATAGAGATTATAGAGAATATATTGAAAAATATTTCGTACAATTGATCACCAAACTGCTTTATTAGACCATAGCTGGAGGACAAATTGCCTCCTCAAGTATGACATATTGTTTTGTCTCAATGTTTATAAAGAAGTCCCTATTACATCATATTCAAAATACTTAACACAAAAAATGTCGCAGTCTCTACTACCAAACTACTGCGGTGCCAATGTAATCCTAAGAATTCGCCATGGTGTCATTGGTAGGTTTGGGCGTACCACGATGACCTGAGATTTATGCAGTAACGGCGGGATGACTGTGCGCATGACCTTCAGTTGCTACTCCAATGATGCATCTGAGGTAATAGACCTCAAGGAGTCCCAGACAACGATCTCACCTTCAACGGAGTCTATGCATATCATAACCCAATGGTTGCTGTTGACATTGAAGGGTAA

mRNA sequence

ATGCACTCACCTATACGTACTGTCAACCCGCCATCTTCTGTACAATTTATGACTCCATTGACGGATAATGTTGTCCCATGCAATTTAGGCAAAGATGAACAAGAACACTTCAGTCATGATCTATCCTCTAGAACACCTGTTGTTGAATTACAGTCTGTAAGTAGGAATGTCCTTTGTGCAACTACTAATAGTCAGCATGCATCCTTAGAACATATCGATAAAATTTGTAATAAGGATGATTTTATTGACGACATTGTAATTGGTAGTGTTTTTCGATCTAATGATGAATTACAATTTAAACTGGACGTTTTTGCTATCAATAGGAATTCTGAGTACAATGTTAAGAAATCTACTACAAAGCTATTATCTATACCATGCACGGAAGAGGGATGCAAATGGGCCCTACGTGCAAGAAGAATCAAAGGTTCGGATACCTTTCTCATCTCAACATTTTCTGAGAATCATAGTTGCGAACGACCGACACTTACACATGACAATCGACAAGCCGGTAGTTCGGTGGTGGGTCAGTTGATAAAGTCCAACTTTGAGGAGGTCAGCTGTCGTTACAAGCCTAAAGATATTATGAATGATATGCGAAAGAATTATGGTGTCAATGTCCGATATGAAAAGGCATGGGGAAGTACAAGGGTTTGGTTTTTCGAGCGGGTTAAGATTTGTATAGGTGACATAAACGGTTTGGTTTTTGTATTTGACCGGCATCAAAGTATCACAAACTCCATGGTAACGGTGTTTCCTGATGCAACGCACGTCACATGCAAACTAACCGGATTCCCAAGAGTCTATAAATATTTGGAAGACATCAGATTCAACAAGTGGGCTCGTGCATATCAACCTGGAATGAGGTATAACCAAATGACCTCAAATCTTGCCAAATCCATGAATGCGATACTTGTTCATGCTCGTACTTTGCCAATAACAGCTCTGAAAATTGTCGAGCTCTATTACAACAATGGTTTTATGAGAGGCGGACAGCTGCCTCTAGTCGAGGAACAATTCTTACTAAATATGCAGATGATATTCTTAAAGAAGAGGCAGAATAAGCTCGATATCATCATGTCAGGCCAATTGATCGGTTCAAATTCAAAGTGCATGATGGTTCCAATAGGTACCGAATCGAAACCCTCATACTTGGTTACGTCGAATCCGTGTATCCACTCGGAGATGAGGAAGATTAGATTTTACTCGATGAATACGTGTCGAAGACGATTAAGCCACCAAAATTTGTTTCTCGTGTTGGACGTCGCCAAACTGTGTGAATACCATCAGTCGGGGAAGTCCGACAGTTACACAAATGCGGGCGATGTGGAAACGTTGGACACAACCTCTCTACTACCAAACTACTGCGGTGCCAATGTAATCCTAAGAATTCGCCATGGTGTCATTGGTAGACCTCAAGGAGTCCCAGACAACGATCTCACCTTCAACGGAGTCTATGCATATCATAACCCAATGGTTGCTGTTGACATTGAAGGGTAA

Coding sequence (CDS)

ATGCACTCACCTATACGTACTGTCAACCCGCCATCTTCTGTACAATTTATGACTCCATTGACGGATAATGTTGTCCCATGCAATTTAGGCAAAGATGAACAAGAACACTTCAGTCATGATCTATCCTCTAGAACACCTGTTGTTGAATTACAGTCTGTAAGTAGGAATGTCCTTTGTGCAACTACTAATAGTCAGCATGCATCCTTAGAACATATCGATAAAATTTGTAATAAGGATGATTTTATTGACGACATTGTAATTGGTAGTGTTTTTCGATCTAATGATGAATTACAATTTAAACTGGACGTTTTTGCTATCAATAGGAATTCTGAGTACAATGTTAAGAAATCTACTACAAAGCTATTATCTATACCATGCACGGAAGAGGGATGCAAATGGGCCCTACGTGCAAGAAGAATCAAAGGTTCGGATACCTTTCTCATCTCAACATTTTCTGAGAATCATAGTTGCGAACGACCGACACTTACACATGACAATCGACAAGCCGGTAGTTCGGTGGTGGGTCAGTTGATAAAGTCCAACTTTGAGGAGGTCAGCTGTCGTTACAAGCCTAAAGATATTATGAATGATATGCGAAAGAATTATGGTGTCAATGTCCGATATGAAAAGGCATGGGGAAGTACAAGGGTTTGGTTTTTCGAGCGGGTTAAGATTTGTATAGGTGACATAAACGGTTTGGTTTTTGTATTTGACCGGCATCAAAGTATCACAAACTCCATGGTAACGGTGTTTCCTGATGCAACGCACGTCACATGCAAACTAACCGGATTCCCAAGAGTCTATAAATATTTGGAAGACATCAGATTCAACAAGTGGGCTCGTGCATATCAACCTGGAATGAGGTATAACCAAATGACCTCAAATCTTGCCAAATCCATGAATGCGATACTTGTTCATGCTCGTACTTTGCCAATAACAGCTCTGAAAATTGTCGAGCTCTATTACAACAATGGTTTTATGAGAGGCGGACAGCTGCCTCTAGTCGAGGAACAATTCTTACTAAATATGCAGATGATATTCTTAAAGAAGAGGCAGAATAAGCTCGATATCATCATGTCAGGCCAATTGATCGGTTCAAATTCAAAGTGCATGATGGTTCCAATAGGTACCGAATCGAAACCCTCATACTTGGTTACGTCGAATCCGTGTATCCACTCGGAGATGAGGAAGATTAGATTTTACTCGATGAATACGTGTCGAAGACGATTAAGCCACCAAAATTTGTTTCTCGTGTTGGACGTCGCCAAACTGTGTGAATACCATCAGTCGGGGAAGTCCGACAGTTACACAAATGCGGGCGATGTGGAAACGTTGGACACAACCTCTCTACTACCAAACTACTGCGGTGCCAATGTAATCCTAAGAATTCGCCATGGTGTCATTGGTAGACCTCAAGGAGTCCCAGACAACGATCTCACCTTCAACGGAGTCTATGCATATCATAACCCAATGGTTGCTGTTGACATTGAAGGGTAA

Protein sequence

MHSPIRTVNPPSSVQFMTPLTDNVVPCNLGKDEQEHFSHDLSSRTPVVELQSVSRNVLCATTNSQHASLEHIDKICNKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGCKWALRARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMNDMRKNYGVNVRYEKAWGSTRVWFFERVKICIGDINGLVFVFDRHQSITNSMVTVFPDATHVTCKLTGFPRVYKYLEDIRFNKWARAYQPGMRYNQMTSNLAKSMNAILVHARTLPITALKIVELYYNNGFMRGGQLPLVEEQFLLNMQMIFLKKRQNKLDIIMSGQLIGSNSKCMMVPIGTESKPSYLVTSNPCIHSEMRKIRFYSMNTCRRRLSHQNLFLVLDVAKLCEYHQSGKSDSYTNAGDVETLDTTSLLPNYCGANVILRIRHGVIGRPQGVPDNDLTFNGVYAYHNPMVAVDIEG

Homology

[Close]

BLAST of Moc04g08560 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-101
Identity = 225/504 (44.64%), Postives = 261/504 (51.79%), Query Frame = 0


Query: 1   MHSPIRTVNPPSSVQFMTPLTDNVVPCNLGKDEQEHFSH--------------------- 60
           +HS IRTV+PPSSV+FMTPLTDNVVPCNLG DE EHF                       
Sbjct: 150 VHSSIRTVHPPSSVKFMTPLTDNVVPCNLGDDEHEHFGQWDDVGDDEDHEYRMVGDDLED 209

Query: 61  ----------------------DLSSRTPVVELQSVSRNVLCATTNSQHASLEHIDKICN 120
                                 D S RTPVVE+QSVSRN  CAT    HASLE +D I  
Sbjct: 210 DDDYQEIESEDDNEADEPVYDGDPSLRTPVVEVQSVSRNAPCATVEGVHASLEQMDTIGC 269

Query: 121 KDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGCKWALRA 180
            DD +DDI +GS+FRS DEL+F L VFAI +N E+ VKKST  LLS+ C EEGC+WALRA
Sbjct: 270 DDDLVDDIALGSLFRSKDELRFTLAVFAIQKNFEFQVKKSTRSLLSVACKEEGCRWALRA 329

Query: 181 RRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMND 240
           R+IKGSDTFLISTFSE+H  ER TL HD++QAGS VVGQLIK+N E++S RY+P+DI+ D
Sbjct: 330 RKIKGSDTFLISTFSEDHIHERETLRHDHKQAGSWVVGQLIKTNLEDISRRYRPRDIITD 389

Query: 241 MRKNYGVNVRYEKAWGSTRV---------------------------------------- 300
           MR+NYGVN RYEK W +  V                                        
Sbjct: 390 MRRNYGVNTRYEKTWRAREVALSLLMGSPKESYTTLHKYGAALKAANVGTVFQIKLEDDT 449

Query: 301 ------------------------------------------------------------ 316
                                                                       
Sbjct: 450 YFKYAFMALGCSIRGFGSCIRQVLVVDGAHLKGKYRGVLLTASSVDGNNQIYPLAFGVVD 509

[Close]

BLAST of Moc04g08560 vs. NCBI nr
Match: XP_022157237.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia])

HSP 1 Score: 339.0 bits (868), Expect = 7.1e-89
Identity = 197/390 (50.51%), Postives = 216/390 (55.38%), Query Frame = 0


Query: 72  IDKICNKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGC 131
           +D I N+D F+ DI +GSVFRS DEL+FKL VFAI +N EY VKKSTTKLLS+ CTE GC
Sbjct: 1   MDTIGNEDGFVHDIAVGSVFRSKDELRFKLAVFAITKNFEYKVKKSTTKLLSVACTENGC 60

Query: 132 KWALRARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKP 191
           KWALR RRIKGS+TFLISTFSENHSCER TL HD+RQAGS VVGQLIKSNFEEVS RY+P
Sbjct: 61  KWALRVRRIKGSNTFLISTFSENHSCERSTLAHDHRQAGSWVVGQLIKSNFEEVSRRYRP 120

Query: 192 KDIMNDMRKNYGVNVRYEKA-----------WGSTR------------------------ 251
           KDI+NDM+KNYGVNVRYEKA            GS R                        
Sbjct: 121 KDIVNDMQKNYGVNVRYEKARRAKEVALGLLMGSPRESYSTLHKYGEALKAVNEGTVFHM 180

Query: 252 ------------------------------------------------------------ 311
                                                                       
Sbjct: 181 KLEDDTFFKYAFMALGCSIRGFGSCIRPILVVDGAHLKGKYKGVLLTASSIDGNNQIYHL 240

Query: 312 -------------VWFFERVKICIGDINGLVFVFDRHQSITNSMVTVFPDATHVTC---- 316
                         WF ERVKICIGDINGLVF+ DRHQSITNS+ TVFPDA HVTC    
Sbjct: 241 AFGVVDKARDDSWTWFIERVKICIGDINGLVFISDRHQSITNSVATVFPDAAHVTCMHHL 300

[Close]

BLAST of Moc04g08560 vs. NCBI nr
Match: XP_022154930.1 (uncharacterized protein LOC111022077 [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-59
Identity = 152/417 (36.45%), Postives = 193/417 (46.28%), Query Frame = 0


Query: 46  PVVELQSVSRNVLCATTNS-QHASLEHIDKICNKDDFIDDIVIGSVFRSNDELQFKLDVF 105
           PV E+QSVS N    T       S ++I     K D + DIV+G +FRS DEL+FKL V 
Sbjct: 84  PVFEVQSVSANACTHTVQELPRCSTQNITSTDAK-DCVGDIVVGGIFRSKDELRFKLLVL 143

Query: 106 AINRNSEYNVKKSTTKLLSIPCTEEGCKWALRARRIKGSDTFLISTFSENHSCERPTLTH 165
           A+  N E+ VKKST  L  + C E GCKW L A RI+G+D+F IS +++ H+C +  L H
Sbjct: 144 AMKLNFEFRVKKSTKTLYIVGCIEVGCKWGLHANRIRGADSFTISKYTDVHNCTQEVLNH 203

Query: 166 DNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMNDMRKNYGVNVRYEKAWGSTRV------- 225
           D+RQA S VVGQL+K+N E+VS  Y+PKDIM DMRK YGVN+RYEKAW +  V       
Sbjct: 204 DHRQARSWVVGQLLKANLEDVSRLYRPKDIMTDMRKQYGVNIRYEKAWRAKEVALNILVG 263

Query: 226 ------------------------------------------------------------ 285
                                                                       
Sbjct: 264 SPKESYNCLRRYEEALKVVNTGTIFEMELEEDKYFKYAFMALGCCIRGFSSCIRPVLVID 323

Query: 286 -----------------------------------------WFFERVKICIGDINGLVFV 316
                                                    WF ER+K CIG+++GL+FV
Sbjct: 324 GAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESBASWSWFLERLKHCIGEVDGLLFV 383

[Close]

BLAST of Moc04g08560 vs. NCBI nr
Match: XP_022156943.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia])

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-59
Identity = 142/409 (34.72%), Postives = 189/409 (46.21%), Query Frame = 0


Query: 53  VSRNVLCATTNSQHASLEHIDKICNKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEY 112
           +S N  C       + L     I NK D++ +I +  +FRS ++L+FKL V A+  N E+
Sbjct: 1   MSGNAPCQIVEEAVSHLMQNIIIANKSDYVCEIAVKGIFRSKEKLRFKLSVLAMKPNFEF 60

Query: 113 NVKKSTTKLLSIPCTEEGCKWALRARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSS 172
            VKKST  L ++ CT++GCKW LR + I+  D+F+IS F++ H C+R  L HD+RQA S 
Sbjct: 61  KVKKSTKTLYTVGCTKQGCKWGLRVKSIREGDSFIISKFNDVHKCKRDVLNHDHRQAQSW 120

Query: 173 VVGQLIKSNFEEVSCRYKPKDIMNDMRKNYGVNVRYEKAWGSTRV--------------- 232
           VVGQL+KSN E+VS +Y+PKDI+NDMRKNYGVN+RYEKAW +  V               
Sbjct: 121 VVGQLLKSNLEDVSRQYRPKDIINDMRKNYGVNIRYEKAWRAKNVCLNLLMGSPKHSYTL 180

Query: 233 ------------------------------------------------------------ 292
                                                                       
Sbjct: 181 LRKYGEALKVVNASIIFEVELEEDKYFNYAFMALGCCIRGFSSCIRPVLVIDDAHLKGKY 240

Query: 293 ---------------------------------WFFERVKICIGDINGLVFVFDRHQSIT 316
                                            WF   VK CIG+++GL+FV D+H  IT
Sbjct: 241 RGVIHIVFSVDDNNQIYPIAFGIVDRESDQSWTWFLNMVKTCIGEVDGLLFVSDQHVCIT 300

[Close]

BLAST of Moc04g08560 vs. NCBI nr
Match: XP_022156802.1 (uncharacterized protein LOC111023635 [Momordica charantia])

HSP 1 Score: 196.1 bits (497), Expect = 7.4e-46
Identity = 118/357 (33.05%), Postives = 154/357 (43.14%), Query Frame = 0


Query: 77  NKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGCKWALR 136
           N  DFI +I +  +FRS +EL+FKL V A+  N ++ VKKST  L ++ CTE+GCKW LR
Sbjct: 180 NGSDFIGEIAVKGIFRSKEELRFKLSVLAMKLNFKFKVKKSTKTLFTVGCTEQGCKWGLR 239

Query: 137 ARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMN 196
           A+ I+G D+F+IS F++ H C+R  L HD+RQA S VVGQL+KSN E+VS +Y+PKDI+N
Sbjct: 240 AKSIQGGDSFIISKFNDFHKCKREVLNHDHRQARSWVVGQLVKSNVEDVSRQYRPKDIIN 299

Query: 197 DMRKNYGVNVRYEKAWGSTRV--------------------------------------- 256
           DMR+NYGVN+RYEKAW +  V                                       
Sbjct: 300 DMRRNYGVNIRYEKAWRAKNVALNLLMGPPKHSYTLLRKYGEALKAVNSCTVFGVELEED 359

Query: 257 ------------------------------------------------------------ 288
                                                                       
Sbjct: 360 KYFKYAFMALSCCIRGLSSCIRPVLVIDGAHLKGKYRGVILIASXVDGNNQXYPLAFGLV 419

[Close]

BLAST of Moc04g08560 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 6.0e-102
Identity = 225/504 (44.64%), Postives = 261/504 (51.79%), Query Frame = 0


Query: 1   MHSPIRTVNPPSSVQFMTPLTDNVVPCNLGKDEQEHFSH--------------------- 60
           +HS IRTV+PPSSV+FMTPLTDNVVPCNLG DE EHF                       
Sbjct: 150 VHSSIRTVHPPSSVKFMTPLTDNVVPCNLGDDEHEHFGQWDDVGDDEDHEYRMVGDDLED 209

Query: 61  ----------------------DLSSRTPVVELQSVSRNVLCATTNSQHASLEHIDKICN 120
                                 D S RTPVVE+QSVSRN  CAT    HASLE +D I  
Sbjct: 210 DDDYQEIESEDDNEADEPVYDGDPSLRTPVVEVQSVSRNAPCATVEGVHASLEQMDTIGC 269

Query: 121 KDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGCKWALRA 180
            DD +DDI +GS+FRS DEL+F L VFAI +N E+ VKKST  LLS+ C EEGC+WALRA
Sbjct: 270 DDDLVDDIALGSLFRSKDELRFTLAVFAIQKNFEFQVKKSTRSLLSVACKEEGCRWALRA 329

Query: 181 RRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMND 240
           R+IKGSDTFLISTFSE+H  ER TL HD++QAGS VVGQLIK+N E++S RY+P+DI+ D
Sbjct: 330 RKIKGSDTFLISTFSEDHIHERETLRHDHKQAGSWVVGQLIKTNLEDISRRYRPRDIITD 389

Query: 241 MRKNYGVNVRYEKAWGSTRV---------------------------------------- 300
           MR+NYGVN RYEK W +  V                                        
Sbjct: 390 MRRNYGVNTRYEKTWRAREVALSLLMGSPKESYTTLHKYGAALKAANVGTVFQIKLEDDT 449

Query: 301 ------------------------------------------------------------ 316
                                                                       
Sbjct: 450 YFKYAFMALGCSIRGFGSCIRQVLVVDGAHLKGKYRGVLLTASSVDGNNQIYPLAFGVVD 509

[Close]

BLAST of Moc04g08560 vs. ExPASy TrEMBL
Match: A0A6J1DU12 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC111023994 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.4e-89
Identity = 197/390 (50.51%), Postives = 216/390 (55.38%), Query Frame = 0


Query: 72  IDKICNKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGC 131
           +D I N+D F+ DI +GSVFRS DEL+FKL VFAI +N EY VKKSTTKLLS+ CTE GC
Sbjct: 1   MDTIGNEDGFVHDIAVGSVFRSKDELRFKLAVFAITKNFEYKVKKSTTKLLSVACTENGC 60

Query: 132 KWALRARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKP 191
           KWALR RRIKGS+TFLISTFSENHSCER TL HD+RQAGS VVGQLIKSNFEEVS RY+P
Sbjct: 61  KWALRVRRIKGSNTFLISTFSENHSCERSTLAHDHRQAGSWVVGQLIKSNFEEVSRRYRP 120

Query: 192 KDIMNDMRKNYGVNVRYEKA-----------WGSTR------------------------ 251
           KDI+NDM+KNYGVNVRYEKA            GS R                        
Sbjct: 121 KDIVNDMQKNYGVNVRYEKARRAKEVALGLLMGSPRESYSTLHKYGEALKAVNEGTVFHM 180

Query: 252 ------------------------------------------------------------ 311
                                                                       
Sbjct: 181 KLEDDTFFKYAFMALGCSIRGFGSCIRPILVVDGAHLKGKYKGVLLTASSIDGNNQIYHL 240

Query: 312 -------------VWFFERVKICIGDINGLVFVFDRHQSITNSMVTVFPDATHVTC---- 316
                         WF ERVKICIGDINGLVF+ DRHQSITNS+ TVFPDA HVTC    
Sbjct: 241 AFGVVDKARDDSWTWFIERVKICIGDINGLVFISDRHQSITNSVATVFPDAAHVTCMHHL 300

[Close]

BLAST of Moc04g08560 vs. ExPASy TrEMBL
Match: A0A6J1DL12 (uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022077 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.7e-60
Identity = 152/417 (36.45%), Postives = 193/417 (46.28%), Query Frame = 0


Query: 46  PVVELQSVSRNVLCATTNS-QHASLEHIDKICNKDDFIDDIVIGSVFRSNDELQFKLDVF 105
           PV E+QSVS N    T       S ++I     K D + DIV+G +FRS DEL+FKL V 
Sbjct: 84  PVFEVQSVSANACTHTVQELPRCSTQNITSTDAK-DCVGDIVVGGIFRSKDELRFKLLVL 143

Query: 106 AINRNSEYNVKKSTTKLLSIPCTEEGCKWALRARRIKGSDTFLISTFSENHSCERPTLTH 165
           A+  N E+ VKKST  L  + C E GCKW L A RI+G+D+F IS +++ H+C +  L H
Sbjct: 144 AMKLNFEFRVKKSTKTLYIVGCIEVGCKWGLHANRIRGADSFTISKYTDVHNCTQEVLNH 203

Query: 166 DNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMNDMRKNYGVNVRYEKAWGSTRV------- 225
           D+RQA S VVGQL+K+N E+VS  Y+PKDIM DMRK YGVN+RYEKAW +  V       
Sbjct: 204 DHRQARSWVVGQLLKANLEDVSRLYRPKDIMTDMRKQYGVNIRYEKAWRAKEVALNILVG 263

Query: 226 ------------------------------------------------------------ 285
                                                                       
Sbjct: 264 SPKESYNCLRRYEEALKVVNTGTIFEMELEEDKYFKYAFMALGCCIRGFSSCIRPVLVID 323

Query: 286 -----------------------------------------WFFERVKICIGDINGLVFV 316
                                                    WF ER+K CIG+++GL+FV
Sbjct: 324 GAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESDASWSWFLERLKHCIGEVDGLLFV 383

[Close]

BLAST of Moc04g08560 vs. ExPASy TrEMBL
Match: A0A6J1DS25 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC111023776 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.2e-59
Identity = 142/409 (34.72%), Postives = 189/409 (46.21%), Query Frame = 0


Query: 53  VSRNVLCATTNSQHASLEHIDKICNKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEY 112
           +S N  C       + L     I NK D++ +I +  +FRS ++L+FKL V A+  N E+
Sbjct: 1   MSGNAPCQIVEEAVSHLMQNIIIANKSDYVCEIAVKGIFRSKEKLRFKLSVLAMKPNFEF 60

Query: 113 NVKKSTTKLLSIPCTEEGCKWALRARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSS 172
            VKKST  L ++ CT++GCKW LR + I+  D+F+IS F++ H C+R  L HD+RQA S 
Sbjct: 61  KVKKSTKTLYTVGCTKQGCKWGLRVKSIREGDSFIISKFNDVHKCKRDVLNHDHRQAQSW 120

Query: 173 VVGQLIKSNFEEVSCRYKPKDIMNDMRKNYGVNVRYEKAWGSTRV--------------- 232
           VVGQL+KSN E+VS +Y+PKDI+NDMRKNYGVN+RYEKAW +  V               
Sbjct: 121 VVGQLLKSNLEDVSRQYRPKDIINDMRKNYGVNIRYEKAWRAKNVCLNLLMGSPKHSYTL 180

Query: 233 ------------------------------------------------------------ 292
                                                                       
Sbjct: 181 LRKYGEALKVVNASIIFEVELEEDKYFNYAFMALGCCIRGFSSCIRPVLVIDDAHLKGKY 240

Query: 293 ---------------------------------WFFERVKICIGDINGLVFVFDRHQSIT 316
                                            WF   VK CIG+++GL+FV D+H  IT
Sbjct: 241 RGVIHIVFSVDDNNQIYPIAFGIVDRESDQSWTWFLNMVKTCIGEVDGLLFVSDQHVCIT 300

[Close]

BLAST of Moc04g08560 vs. ExPASy TrEMBL
Match: A0A6J1DSY0 (uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023635 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-46
Identity = 118/357 (33.05%), Postives = 154/357 (43.14%), Query Frame = 0


Query: 77  NKDDFIDDIVIGSVFRSNDELQFKLDVFAINRNSEYNVKKSTTKLLSIPCTEEGCKWALR 136
           N  DFI +I +  +FRS +EL+FKL V A+  N ++ VKKST  L ++ CTE+GCKW LR
Sbjct: 180 NGSDFIGEIAVKGIFRSKEELRFKLSVLAMKLNFKFKVKKSTKTLFTVGCTEQGCKWGLR 239

Query: 137 ARRIKGSDTFLISTFSENHSCERPTLTHDNRQAGSSVVGQLIKSNFEEVSCRYKPKDIMN 196
           A+ I+G D+F+IS F++ H C+R  L HD+RQA S VVGQL+KSN E+VS +Y+PKDI+N
Sbjct: 240 AKSIQGGDSFIISKFNDFHKCKREVLNHDHRQARSWVVGQLVKSNVEDVSRQYRPKDIIN 299

Query: 197 DMRKNYGVNVRYEKAWGSTRV--------------------------------------- 256
           DMR+NYGVN+RYEKAW +  V                                       
Sbjct: 300 DMRRNYGVNIRYEKAWRAKNVALNLLMGPPKHSYTLLRKYGEALKAVNSCTVFGVELEED 359

Query: 257 ------------------------------------------------------------ 288
                                                                       
Sbjct: 360 KYFKYAFMALSCCIRGLSSCIRPVLVIDGAHLKGKYRGVILIASXVDGNNQXYPLAFGLV 419

The following BLAST results are available for this feature:

BLAST of Moc04g08560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154803.1	1.2e-101	44.64	uncharacterized protein LOC111021969 [Momordica charantia]	[more]
XP_022157237.1	7.1e-89	50.51	protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]	[more]
XP_022154930.1	1.2e-59	36.45	uncharacterized protein LOC111022077 [Momordica charantia]	[more]
XP_022156943.1	4.5e-59	34.72	protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]	[more]
XP_022156802.1	7.4e-46	33.05	uncharacterized protein LOC111023635 [Momordica charantia]	[more]

BLAST of Moc04g08560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g08560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLB0	6.0e-102	44.64	uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1DU12	3.4e-89	50.51	protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1DL12	5.7e-60	36.45	uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DS25	2.2e-59	34.72	protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1DSY0	3.6e-46	33.05	uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc04g08560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 86..148 e-value: 4.1E-8 score: 33.1
None	No IPR available	PANTHER	PTHR31973:SF106	OS09G0268600 PROTEIN	coord: 87..214
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 87..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g08560.1	Moc04g08560.1	mRNA