Moc04g06710 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g06710
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	40S ribosomal protein S16
Location	chr4: 4715726 .. 4722392 (-)
RNA-Seq Expression	Moc04g06710
Synteny	Moc04g06710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCCGATCGAGTCGGTCCAGTGTTTCGGCCGGAAAAAGACGGCGGTGGCGGTGACGTACTGTAAGCGCGGTAGGGGTTTGATTAAGATCAATGGGTGCCCAATCGAACTTGTGGAGCCTGAGATCCTCCGTTTCAAGGCTTATGAGCCCATCCTCCTCCTTGGACGACACAGGTTCTCTGGAGTCGACATGCGCATCAGGGTCAAGGGTGGTGGTCACACCTCGCAGATTTACGCCATTCGTCAGAGCATAGCGAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAAATTAAGGATATCCTCGTCAGGTACGATAGGACCTTGCTAGTCGCGGATCCCCGACGTTGCGAGCCCAAGAAGTTTGGTGGTCGTGGAGCTCGTGCGAGGTTCCAGAAATCTTACCGTTGAACCCAATATATCCCATTTTGGAAAAGACTTTGTTATGGTTTTTGGCTTGCGGTTCTTTTTTATGCTTTCGAATTTACAAGGTTTTTTTTGGTTTAACCCTTTAATCTGTTCTCTCATAAAATTAGAATTTTTGTCGTAATGATTTAGACTCTTTTTTGCAATTATATTATTCGGCATTGGAATGCTCTTAGCTGATTAGTAGCCTGGATCTACAATAGCAGTTTGAATGGTGTTACTTTTCTCTGCAAGCTCTGTCACACCGTGTGTTTCCTAATTCTTATTATTCCCATTCTACGAATTTATGTGTTAGGGCGTAGTGTTTGACTTGGTTGATAGATTTGGTTGACAAACGCCTTCTGGTTGTCTCGCCTTGTGGCACATCCCTGTTCAAGTTAGCTGCTTGTGCTAAGAATTTGCCTTTGTCTGTGTCATTGATTGCAGCCCATGTACCTGATAGTGTCCAATCATGAATGGTTTTTGTTTGTGAATTTGGTTATCACTTTGTTCTCTTGGTGTATGGTTATCCCGAGCTCATTATGTAAATTTTAAATTGTAATTTTGCCATCCAAGTGTGTAATGCTGTGGTATATGGTTCACATTTTAACATTGACTGGAAATTTTTATTGACTTGAAAATGGGGGCATTAACAGTGTTTATTTCAGGCCTTGGAAAGAAACTCTCAAGTCAGTTTGTTGGACAATGTACTTCAGTACCTCTTTAGAGTCTTAGAAATTGTTAAAACTGATCAATTTTAAGTTATGTGACATCGTGATGCAGTATATTGTTTGTGTTTGGATATGAGTGTAACCTACTTGCTAGAAATATATTAGTTTCTGCCGATGTCCTTACATATTTTGCCACATGATTATTTAAGATGTATAAGTCATGTCTCCCATTGCTTTTAATGATACAAGTATCAGTCTGCAAGGTTTTTTTGCTACTAAAGCATGAAGGCATTTTCTGTTGAGTTTTCTTCTTGGAAGAATGGGTAGCCAATAGGGTGCTAGTTAATCCATTTGCCATTACTTGACGTTAGGCTGAAGGTCAGCCCTAAGGGGAAGGTTGGTTGATAAAGGTTTGGGGTCTCTTTGTGATACTGGTTTAGAGGTCTCAAGTTCGATTCTTTGGGTGTGCTTAATACCAAAAACTCTTGATGTCTCTCTCGCATCTTGGTCTTAGGTTGGGCATGGGTGCTCATGGGTATAGGGACTTCCCATCTTTAAAAAAAGATATTAAGTTGAAGATATATTGTGGAAACACTTTAGGATCAAGTAAATATGTTTCACTGTTACTTGGATCAATTTTTGTTGTAGTCTTATTCTGTTATATGTGTGTGTGTGTGTATATATATATATTAGTTTTTAAACTTTCCATGCTTGTTCTATTTTGTGTTTGTACTTTTGTTACTATTATAAATCTAATCTTTGTCACATTTGTTACTATTCTTCATTACTAGTTGATTGATTCCTTTTAAAGTTTTGGCTTCAATGATTATGAATATCCATTATGTTCGAGTTAATAGCCAAATTGTTATCGAATAGAGAGTAAATACAAGAATTATATCTCATACAAGTTAGTTTTATGTAATTTAATTTATATGTTCGTTCGTAGTAAATTTATGCCTGAACAGAACCAAATTGATACTATTGGAGATAAAACTATTAAGTTACATGTTTCTGGATAGAATTTTCAGAATCGTTTGTAATTTGGAATGAAAATGGCTGATAATGTAGTGCTGGTCGTGTGGATGACCCTTCACATGGTTTGATGTGCAAAATTATATTATATGTAATAATATATTTTGACTTATCACTTTGTTATTTATTTAACTTTTTTTTTTGTCAAAAGGGGTGAGGATTTGGACTTTCCACTTCTGATCTAAGTTATAGTTACATGGTTTAGTTAGTTGAGACATCGGACTAAGTTGAGTTAGGTTAAAGGGATTTTTTGGACGAATTCGAAAATTCGGTTGGGTTAAAGGGATTTTTTGGACCAACTCGAAAATTCGAGTTGGTTAGTTTGTGGACTCCATCGAACCAAAGTTGATAGGCAACCCAATCAGGTTCCAATAAGAGTTCTGTAACAAAAGTTCCACCAAAATTTTGTGGGTTTATGGGACTGATTTTGCAGAACAAAAGAAAGATAAAAAGCAATATAGAGACAGAGAGGGGGAAAACACCTGAAAATGACAGCGAGGTCAGGCACTCCCAAAAGGTTTCATAACCCAACTCAAACGGAGGATCTTCGACTCCACGAGTTCGGAGAATCTCTGGCTCCAAGGCAACCAAGTTTCTACTCTCTATTTTGCTTTTCTGTTACCTAGTTCCTTTGGCAAGTAGTTCTCCGACTCTCCCACTTTTATGATTTTCAAGTTTCTTGATTTTGAAACAAATTACGCAGAGGGAAGGTTTATATTACGGATGCAGGGCGATGAGCCCAGAATTGCCCCTTTGGGTCATATTATTGGGCAAGTAAGACTGTAGGATTGGGTCAATTGCTTGGCTTTTGCAATGAAGAACCGCACAGAATGTTGGAGTATGAGTACATGCCTAATGCTTCCCTCGCAGATTTTCTTTTCGGGTCTTCAAAACCAAATTGGTATCTGTTGGGATAAAAATTGTGGAGACAAATATTTGAAAAAGTCCAAACCTTTCTTTATTCTTCTTTTGTTGGTGGTGTGTGGCAAAATCAGCCGACAGTTCAAAACAAATTTGGTGAGTGGCGGTCGAAAACGATTTTGCACACAAATTTGAGTGGCGGCAAAGTTGTGTTGTTGCACAAACTTGTTGGCGGTGGCAGTGAGTGTTGGCAGAGCTTTAGAGGGGAGTTTTGGAAGTTGTAGTGCATTGTCGGCAACCAAATCTTGTGAGTATTGTGAGGTTTTTAATTATTGTATTTCTTAGGATTATATTGTTGTAGTTTCTAGAAACTAATTAACTTTTGTCGAGGCCTCTAGATTTGAGAGATTATATTATTGTCCACATATCATAGTAGAACCCGTTATCGCGGAATACTGAAATATTATTGGTAAGTAAATTTTTCCAACAATATCAAAAGAATTCAATAGGTTGACACTCACCAGTCCAATTTCAAAATACCCTAGGTTGACAGAGCATGCTCAACCCACTAAGCTGAAGGAAATTTTAATGACAAATATAACAAATAAATTATACATTACAAACTTCAACCTCACCAGAGTTTTGCCAAATCTTGAAACTCGTCATGAACCAATGGTTTCGTATGAATTTCATACTACTCAAATGAGATTTATTTCACCAAGTTTCATTTCATCTCTTTATTTATGTTTCAAACCTCACACTTTTTCATCAAACTAATGGTAATTTGGTACTTTCACCTTGCTAATAAATTAAAAAATATTTTTTGGTAAAAAAAAAAGTTTTGAAAACTTCTGGAAAACAGAAAAGATAATGGGCAGAACTATACCAGGTCAAACAACATCGAAAGTAGAAAAGATGAATAGGATTATTCCTATCTTCAGGATTACTGTAGATGTCAAAATCCCATAATATTTTACTCTAACGATTTTATAAATATAAAAAACATCATGACTGATAAAATGTCAACAGATTCTGATCTAGTTGAGTTCTTGAGGGATTATTATAAGAAATTAGGACTTTTAGTTGAAGAAAGTAATAAGGAGGTGAGTAAGAAGAAGACTCTGTCATCCATCTTTTGAATCAGAAAAAAGAATCAGAGTTGTCTTCTATGGATTTGAGAGATTTACAAATTAAGTATTGAATACATGTCTATGAATTTTGATGAACAATCAATTTTAAGGAATCGTCTAAAATAATTAATATTTTAATAAAGAGCAAAGTGTACCTCACTCTAGTTTAAAACCCCTTACACACAAAAAAAGTTGAAATGATGGAACATCAAACAAGTTTAATTGACTGGTTAATTAATATTTTTCACTCTCCTCTAGAGGATGTTTGTCTCCCCTCATTTGTCCCACATATTACACCGTTGACTGGTAACGTTATCCCATGTAACCTACGCGATGACAAATCTCCATATTATGATCAATTGTACGAGAATGAGGTTGAGTATGAGTTTCAGAGCGATGATGCGTATGATTATGAAGAATATCATACTGAGGATGGGGTTGAGGACGAAGATAGTGAAGCAAAGATTGAAAACAATGGTAGGAATGTGTATAATAACGGGGAGGGAGATGTGCTTGAAGACCATTTTGAGAATCAAGGTCGACCTGTTCATGAGTCGCATATAGTGAGTGAGAGAATGCACCTTGTCAAACAGTTGAAGGAGTAGTTTCACGTTCGATGCAGAATATCGTAACTGGTGATGAGACAGACTATGTAAGTGAAATTGTTGTTAAGGGTATTTTCCGATCGAAAGAAGAACTACGCTTCAAGCTGTCTGTGTTAGCTATGAAGCTTAATTTTGAATTTAAGGTATAATGGTAATTTCAAATTCACAGTAGTGGTTCTCTTTTTCACGGTCGTGGTACAACGAGTGGTTAGGTGAAACCTCGTCCATGAGAGATATTGCATTAACACCACGACCGTGTTGATTCGATCACGCCCGTGGTTTATGGTTCATTTGCGACTTCACTTTTGGTTTCCATATTGAGGCTAAAATAGTAATTTAACCCTTCTATATTCTTTTCAAATAATAGATTGGGCCAGAAAAGTCAATTTTTCTAATTGAGGTCATTAGAGCAAATGAGAAACTTTTTTAGGTCGTCAAAATCCGTAATTTCGAAGTACGCAAAACTCAAGTGGGCAGAACACTCTCAATCCACTCAGCAGAAAAGGAATTTTAATTACTCATAAGAGATTTCTTTGACCAAGTTTCATTTCATTGCTTTATCCATGACTCAGACCTCTCTCTCTCTTTTTTTTTATCAAACTAATAGTAGTTTTGTATTTTTGTCTTCGCTAACAAATCAGAAAAATATCTTTTGGGTCAATAAACAAGTTCCGAAAATTTGGGTCAATTACGTAAATCCAAAAACCTTTTGAATTATTTTGGTCAATTTTCCCTATTGTTTATTCAACTCTTAAAATTATCTTGTTTTTGTATTGTTGGGCCGTTGGCCCACTTGGGCTCACAATATCGAAACCCATTTATGAAGTGGTTAGGGCACTTCTTCTTCGGACAAAAGAAAACAGAAGCGTTTTTTTTTTTTGGGGGGGGGGGGTTCTTCTTGCGGCGGTAGCGAACCGGCGACTAGGGTTTTTTCTTATTCCTTCGCGTGTGAGCGCCGGAAGCCAGAGAGAGGTGAGTCGGTGTATAGCAGGTTCAGTCGATTTTGTAAACGTATTAATTGCAGTTCGTTTGATGTTTTCTCTACTGTACCTTTTGTAGCAGGAAATTTAGGCTTGTTATTTGAATAAGAAAAGAATGAGGTTAGAGAAGTGTTGGTTCTGTTCCTCCACCATATATCCAGGACATGGTATTCAGTTCGTTCGCAATGATGCCAAGGTAAGGGTGTAAAGTTGTTTTTATTAGCTTGAAGATTGCAAACTTTCTTGTTGACTTACGAGCCACCATCTTGTTCATGATCCTTTGTTTGCGGTGCATATTAGTTGTAGGAATTGATGGTCGTTCTTGGTGGTCGTTTTTCTGCAGATTTTTAAATTTTGTCGGTCAAAATGCCACAAGAACTTCAAGATGAAGAGGAATCCCCGTAAAGTAAAATGGACTAAGGCATACAGGAGGTTGAATGGAAAGGATATGACACAGGTAAACTTTCTTGATTGATTTCTGGAACAATTAGGATTTTGATTTTTGAAAGTCCAAACTTTCTGGCGTCTCTTTAATTGTTGTTTCATATTGGTATTATCCAGGACTCGACTTTTGAGTTTGAGAGGAAGCGCAACAGGCCAGAGAGATATGACAGGAATCTCACAGAAGAGACATTGAGGGCTATTAAGAAGATCGATAAAGTCAGAGCAGATAGGGAGTCAAGGCACATTGCACGCAGGTTTAAATCTCTTCCATTACCACGCTGTATGCCTATATACTGTAACTACTGCTTTAGGTGTAACTTGGGATTGTTCACATTTGTAGAATGCAAGGAAAGAAAGCAAAGGAGCTCAAAGAGGCGCGCAAGGAATTGGATCAGAGCATCAGTTTGGTCAAAGCACCTTCTGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGATCAAAGTCAAGGTGGCACAATCGCAAGCAGAGCAAAATCAGGCTATGGAAGAATGA

mRNA sequence

ATGGCTGCTCCGATCGAGTCGGTCCAGTGTTTCGGCCGGAAAAAGACGGCGGTGGCGGTGACGTACTGTAAGCGCGGTAGGGGTTTGATTAAGATCAATGGGTGCCCAATCGAACTTGTGGAGCCTGAGATCCTCCGTTTCAAGGCTTATGAGCCCATCCTCCTCCTTGGACGACACAGGTTCTCTGGAGTCGACATGCGCATCAGGGTCAAGGGTGGTGGTCACACCTCGCAGATTTACGCCATTCGTCAGAGCATAGCGAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAAATTAAGGATATCCTCGTCAGGTACGATAGGACCTTGCTAGTCGCGGATCCCCGACGTTGCGAGCCCAAGAAGTTTGGTGGTCGTGGAGCTCGTGCGAGGTCAGCCCTAAGGGGAAGGTTGGTTGATAAAGGTTTGGGGTCTCTTTGTGATACTGGTTTAGAGGATGGGGTTGAGGACGAAGATAGTGAAGCAAAGATTGAAAACAATGGTAGGAATGTGTATAATAACGGGGAGGGAGATGTGCTTGAAGACCATTTTGAGAATCAAGGTCGACCTGTTCATGAGTCGCATATAAATATCGTAACTGGTGATGAGACAGACTATGTAAGTGAAATTGTTGTTAAGGGTATTTTCCGATCGAAAGAAGAACTACGCTTCAAGCTGTCTGTGTTAGCTATGAAGCTTAATTTTGAATTTAAGGCTTGTTATTTGAATAAGAAAAGAATGAGGTTAGAGAAGTGTTGGTTCTGTTCCTCCACCATATATCCAGGACATGGTATTCAGTTCGTTCGCAATGATGCCAAGATTTTTAAATTTTGTCGGTCAAAATGCCACAAGAACTTCAAGATGAAGAGGAATCCCCGTAAAGTAAAATGGACTAAGGCATACAGGAGGTTGAATGGAAAGGATATGACACAGGACTCGACTTTTGAGTTTGAGAGGAAGCGCAACAGGCCAGAGAGATATGACAGGAATCTCACAGAAGAGACATTGAGGGCTATTAAGAAGATCGATAAAGTCAGAGCAGATAGGGAGTCAAGGCACATTGCACGCAGAATGCAAGGAAAGAAAGCAAAGGAGCTCAAAGAGGCGCGCAAGGAATTGGATCAGAGCATCAGTTTGGTCAAAGCACCTTCTGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGATCAAAGTCAAGGTGGCACAATCGCAAGCAGAGCAAAATCAGGCTATGGAAGAATGA

Coding sequence (CDS)

ATGGCTGCTCCGATCGAGTCGGTCCAGTGTTTCGGCCGGAAAAAGACGGCGGTGGCGGTGACGTACTGTAAGCGCGGTAGGGGTTTGATTAAGATCAATGGGTGCCCAATCGAACTTGTGGAGCCTGAGATCCTCCGTTTCAAGGCTTATGAGCCCATCCTCCTCCTTGGACGACACAGGTTCTCTGGAGTCGACATGCGCATCAGGGTCAAGGGTGGTGGTCACACCTCGCAGATTTACGCCATTCGTCAGAGCATAGCGAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAAATTAAGGATATCCTCGTCAGGTACGATAGGACCTTGCTAGTCGCGGATCCCCGACGTTGCGAGCCCAAGAAGTTTGGTGGTCGTGGAGCTCGTGCGAGGTCAGCCCTAAGGGGAAGGTTGGTTGATAAAGGTTTGGGGTCTCTTTGTGATACTGGTTTAGAGGATGGGGTTGAGGACGAAGATAGTGAAGCAAAGATTGAAAACAATGGTAGGAATGTGTATAATAACGGGGAGGGAGATGTGCTTGAAGACCATTTTGAGAATCAAGGTCGACCTGTTCATGAGTCGCATATAAATATCGTAACTGGTGATGAGACAGACTATGTAAGTGAAATTGTTGTTAAGGGTATTTTCCGATCGAAAGAAGAACTACGCTTCAAGCTGTCTGTGTTAGCTATGAAGCTTAATTTTGAATTTAAGGCTTGTTATTTGAATAAGAAAAGAATGAGGTTAGAGAAGTGTTGGTTCTGTTCCTCCACCATATATCCAGGACATGGTATTCAGTTCGTTCGCAATGATGCCAAGATTTTTAAATTTTGTCGGTCAAAATGCCACAAGAACTTCAAGATGAAGAGGAATCCCCGTAAAGTAAAATGGACTAAGGCATACAGGAGGTTGAATGGAAAGGATATGACACAGGACTCGACTTTTGAGTTTGAGAGGAAGCGCAACAGGCCAGAGAGATATGACAGGAATCTCACAGAAGAGACATTGAGGGCTATTAAGAAGATCGATAAAGTCAGAGCAGATAGGGAGTCAAGGCACATTGCACGCAGAATGCAAGGAAAGAAAGCAAAGGAGCTCAAAGAGGCGCGCAAGGAATTGGATCAGAGCATCAGTTTGGTCAAAGCACCTTCTGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGATCAAAGTCAAGGTGGCACAATCGCAAGCAGAGCAAAATCAGGCTATGGAAGAATGA

Protein sequence

MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARSALRGRLVDKGLGSLCDTGLEDGVEDEDSEAKIENNGRNVYNNGEGDVLEDHFENQGRPVHESHINIVTGDETDYVSEIVVKGIFRSKEELRFKLSVLAMKLNFEFKACYLNKKRMRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNGKDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKELKEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE

Homology

[Close]

BLAST of Moc04g06710 vs. NCBI nr
Match: XP_022135604.1 (probable ribosome biogenesis protein RLP24 [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 9.0e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE
Sbjct: 121 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 168

[Close]

BLAST of Moc04g06710 vs. NCBI nr
Match: XP_022148700.1 (probable ribosome biogenesis protein RLP24 [Momordica charantia])

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-83
Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRLNG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKK KEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKGKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAME+
Sbjct: 121 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEQ 168

[Close]

BLAST of Moc04g06710 vs. NCBI nr
Match: XP_038905540.1 (probable ribosome biogenesis protein RLP24 isoform X1 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-82
Identity = 163/179 (91.06%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 243 EFKACYLNKKRMRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKV 302
           +F+ CYL KKRMRLEKCWFCSSTIYPGHGIQFVRNDA IF+FCRSKCHKNFKMKRNPRKV
Sbjct: 18  KFRLCYLLKKRMRLEKCWFCSSTIYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKV 77

Query: 303 KWTKAYRRLNGKDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIA 362
           KWTKAYRRL+GKDMTQDSTFEFERKRNRPERYDRNLTEETL+AIKKIDKVRA+RESRHIA
Sbjct: 78  KWTKAYRRLHGKDMTQDSTFEFERKRNRPERYDRNLTEETLKAIKKIDKVRANRESRHIA 137

Query: 363 RRMQGKKAKELKEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           RR QGKKAKEL EA+KELDQSISLVKAPS LKEDPSLTLPKIKVKV  SQAEQNQ MEE
Sbjct: 138 RRHQGKKAKELGEAQKELDQSISLVKAPSALKEDPSLTLPKIKVKVVPSQAEQNQRMEE 196

[Close]

BLAST of Moc04g06710 vs. NCBI nr
Match: XP_022976358.1 (probable ribosome biogenesis protein RLP24 [Cucurbita maxima] >XP_022976359.1 probable ribosome biogenesis protein RLP24 [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 2.5e-79
Identity = 157/168 (93.45%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL+G
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRA+RESRHIARRMQGKKAKEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRAERESRHIARRMQGKKAKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           +EA+KELDQSISLVKAP  LKEDPSLTLPKIKV V  SQAEQNQ+MEE
Sbjct: 121 REAKKELDQSISLVKAPLALKEDPSLTLPKIKVSVEPSQAEQNQSMEE 168

[Close]

BLAST of Moc04g06710 vs. NCBI nr
Match: KAG6591317.1 (putative ribosome biogenesis protein RLP24, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024200.1 putative ribosome biogenesis protein RLP24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-78
Identity = 155/168 (92.26%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL+G
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRA+RESRHIARRMQGKKA+EL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRAERESRHIARRMQGKKAQEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           +EA+KELDQSISLVKAP  LKEDPSLTLPKIK+ V  SQAEQNQ+MEE
Sbjct: 121 REAKKELDQSISLVKAPLALKEDPSLTLPKIKLNVEPSQAEQNQSMEE 168

[Close]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot
Match: P46293 (40S ribosomal protein S16 OS=Gossypium hirsutum OX=3635 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 7.9e-68
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 5   IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGV 64
           IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GV
Sbjct: 6   IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGV 65

Query: 65  DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 124
           DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILV YDRTLLVADPRR
Sbjct: 66  DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRR 125

Query: 125 CEPKKFGGRGARAR 139
           CEPKKFGGRGARAR
Sbjct: 126 CEPKKFGGRGARAR 139

[Close]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot
Match: Q9SK22 (40S ribosomal protein S16-1 OS=Arabidopsis thaliana OX=3702 GN=RPS16A PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.2e-65
Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKFGGRGARAR 139
           EPKKFGGRGAR+R
Sbjct: 128 EPKKFGGRGARSR 140

[Close]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot
Match: Q42340 (40S ribosomal protein S16-3 OS=Arabidopsis thaliana OX=3702 GN=RPS16C PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-64
Identity = 118/133 (88.72%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKFGGRGARAR 139
           EPKKFGGRGAR+R
Sbjct: 128 EPKKFGGRGARSR 140

[Close]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot
Match: O22647 (40S ribosomal protein S16 OS=Fritillaria agrestis OX=64177 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-64
Identity = 122/139 (87.77%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRH 60
           MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRH
Sbjct: 1   MATPATESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRH 60

Query: 61  RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLV 120
           RF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVDEQ+KKE+KDIL+RYDRTLLV
Sbjct: 61  RFVGVDMRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLV 120

Query: 121 ADPRRCEPKKFGGRGARAR 139
           ADPRRCEPKKFGGRGAR+R
Sbjct: 121 ADPRRCEPKKFGGRGARSR 139

[Close]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot
Match: Q9XEK7 (40S ribosomal protein S16 OS=Syntrichia ruralis OX=38588 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 116/136 (85.29%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 3   APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFS 62
           A +ESVQCFGRKKTAVAVTYC+RGRGLI++   PIELVEPEILR+KA+EP+LLLGR +F+
Sbjct: 2   AAVESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFA 61

Query: 63  GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADP 122
           GVDMRIRVKGGG+TSQIYAIRQSIAKALVA++QKYVDEQSKKEIKD+L+RYDRTLLVADP
Sbjct: 62  GVDMRIRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVADP 121

Query: 123 RRCEPKKFGGRGARAR 139
           RRCEPKKFGGRGAR+R
Sbjct: 122 RRCEPKKFGGRGARSR 136

[Close]

BLAST of Moc04g06710 vs. ExPASy TrEMBL
Match: A0A6J1C1W9 (probable ribosome biogenesis protein RLP24 OS=Momordica charantia OX=3673 GN=LOC111007521 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 4.3e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE
Sbjct: 121 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 168

[Close]

BLAST of Moc04g06710 vs. ExPASy TrEMBL
Match: A0A6J1D3M8 (probable ribosome biogenesis protein RLP24 OS=Momordica charantia OX=3673 GN=LOC111017299 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.3e-84
Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRLNG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKK KEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKGKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAME+
Sbjct: 121 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEQ 168

[Close]

BLAST of Moc04g06710 vs. ExPASy TrEMBL
Match: A0A6J1ILW2 (probable ribosome biogenesis protein RLP24 OS=Cucurbita maxima OX=3661 GN=LOC111476784 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 157/168 (93.45%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL+G
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRA+RESRHIARRMQGKKAKEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRAERESRHIARRMQGKKAKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           +EA+KELDQSISLVKAP  LKEDPSLTLPKIKV V  SQAEQNQ+MEE
Sbjct: 121 REAKKELDQSISLVKAPLALKEDPSLTLPKIKVSVEPSQAEQNQSMEE 168

[Close]

BLAST of Moc04g06710 vs. ExPASy TrEMBL
Match: A0A6J1KWV2 (probable ribosome biogenesis protein RLP24 OS=Cucurbita maxima OX=3661 GN=LOC111498315 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-79
Identity = 153/168 (91.07%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSST+YPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL+G
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRA+RE+RHIARRM+GKK KEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRAEREARHIARRMKGKKGKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKEL+QSIS+VK P++LKEDPSLTLPKI+VKVAQSQAE+NQ MEE
Sbjct: 121 KEARKELEQSISMVKPPALLKEDPSLTLPKIQVKVAQSQAEKNQPMEE 168

[Close]

BLAST of Moc04g06710 vs. ExPASy TrEMBL
Match: A0A6J1GEZ5 (probable ribosome biogenesis protein RLP24 OS=Cucurbita moschata OX=3662 GN=LOC111453564 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-79
Identity = 153/168 (91.07%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSST+YPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL+G
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRA+RE+RHIARRM+GKK KEL
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRAEREARHIARRMKGKKGKEL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
           KEARKEL+QSIS+VK P++LKEDPSLTLPKI+VKVAQSQAE+NQ MEE
Sbjct: 121 KEARKELEQSISMVKPPALLKEDPSLTLPKIQVKVAQSQAEKNQPMEE 168

[Close]

BLAST of Moc04g06710 vs. TAIR 10
Match: AT2G09990.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 5.8e-66
Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKFGGRGARAR 139
           EPKKFGGRGAR+R
Sbjct: 128 EPKKFGGRGARSR 140

[Close]

BLAST of Moc04g06710 vs. TAIR 10
Match: AT5G18380.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 7.6e-66
Identity = 118/133 (88.72%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKFGGRGARAR 139
           EPKKFGGRGAR+R
Sbjct: 128 EPKKFGGRGARSR 140

[Close]

BLAST of Moc04g06710 vs. TAIR 10
Match: AT3G04230.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-61
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVD
Sbjct: 8   ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVD 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKEIKDIL+RYDRTLLVADPRRC
Sbjct: 68  MRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRC 127

Query: 126 EPKKFGGRGARAR 139
           E KKFGG GARAR
Sbjct: 128 ESKKFGGPGARAR 140

[Close]

BLAST of Moc04g06710 vs. TAIR 10
Match: AT5G18380.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-59
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           E  +F
Sbjct: 128 ELFRF 132

[Close]

BLAST of Moc04g06710 vs. TAIR 10
Match: AT2G44860.1 (Ribosomal protein L24e family protein )

HSP 1 Score: 225.7 bits (574), Expect = 6.9e-59
Identity = 115/168 (68.45%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 254 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLNG 313
           MRLEKCWFCSSTIYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKA+R  +G
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60

Query: 314 KDMTQDSTFEFERKRNRPERYDRNLTEETLRAIKKIDKVRADRESRHIARRMQGKKAKEL 373
           KDMT+D+TFEFE+KRNRPERYDRN+TE TL AIKKI K+R  RE++HI  R++  K K+L
Sbjct: 61  KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENRLKPNKQKKL 120

Query: 374 KEARKELDQSISLVKAPSVLKEDPSLTLPKIKVKVAQSQAEQNQAMEE 422
            +  KELDQ+I +V+AP            KIKV V++ ++ QN+AMEE
Sbjct: 121 NDDMKELDQNIHMVQAPGA---------QKIKVDVSEKKSVQNEAMEE 159

The following BLAST results are available for this feature:

BLAST of Moc04g06710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135604.1	9.0e-85	100.00	probable ribosome biogenesis protein RLP24 [Momordica charantia]	[more]
XP_022148700.1	1.3e-83	98.21	probable ribosome biogenesis protein RLP24 [Momordica charantia]	[more]
XP_038905540.1	2.4e-82	91.06	probable ribosome biogenesis protein RLP24 isoform X1 [Benincasa hispida]	[more]
XP_022976358.1	2.5e-79	93.45	probable ribosome biogenesis protein RLP24 [Cucurbita maxima] >XP_022976359.1 pr...	[more]
KAG6591317.1	1.6e-78	92.26	putative ribosome biogenesis protein RLP24, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Moc04g06710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46293	7.9e-68	96.27	40S ribosomal protein S16 OS=Gossypium hirsutum OX=3635 GN=RPS16 PE=2 SV=1	[more]
Q9SK22	8.2e-65	89.47	40S ribosomal protein S16-1 OS=Arabidopsis thaliana OX=3702 GN=RPS16A PE=2 SV=1	[more]
Q42340	1.1e-64	88.72	40S ribosomal protein S16-3 OS=Arabidopsis thaliana OX=3702 GN=RPS16C PE=2 SV=1	[more]
O22647	1.4e-64	87.77	40S ribosomal protein S16 OS=Fritillaria agrestis OX=64177 GN=RPS16 PE=2 SV=1	[more]
Q9XEK7	1.1e-61	85.29	40S ribosomal protein S16 OS=Syntrichia ruralis OX=38588 GN=RPS16 PE=2 SV=1	[more]

BLAST of Moc04g06710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1W9	4.3e-85	100.00	probable ribosome biogenesis protein RLP24 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1D3M8	6.3e-84	98.21	probable ribosome biogenesis protein RLP24 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1ILW2	1.2e-79	93.45	probable ribosome biogenesis protein RLP24 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1KWV2	7.9e-79	91.07	probable ribosome biogenesis protein RLP24 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GEZ5	7.9e-79	91.07	probable ribosome biogenesis protein RLP24 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Moc04g06710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G09990.1	5.8e-66	89.47	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT5G18380.1	7.6e-66	88.72	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G04230.1	1.5e-61	84.21	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT5G18380.2	2.4e-59	86.40	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT2G44860.1	6.9e-59	68.45	Ribosomal protein L24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011017	TRASH domain	SMART	SM00746	4TRASH	coord: 259..297 e-value: 9.7E-12 score: 55.0
IPR038630	Ribosomal protein L24e/L24 superfamily	GENE3D	2.30.170.20	Ribosomal protein L24e	coord: 254..321 e-value: 7.5E-34 score: 117.6
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 12..140 e-value: 1.3E-27 score: 96.7
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 4..138
IPR000988	Ribosomal protein L24e-related	PFAM	PF01246	Ribosomal_L24e	coord: 254..318 e-value: 7.0E-33 score: 112.7
IPR000988	Ribosomal protein L24e-related	CDD	cd00472	Ribosomal_L24e_L24	coord: 254..307 e-value: 2.58978E-30 score: 109.199
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 2..144 e-value: 3.5E-50 score: 172.0
None	No IPR available	PANTHER	PTHR21569:SF28	SUBFAMILY NOT NAMED	coord: 4..138
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 257..309
IPR023442	Ribosomal protein L24e, conserved site	PROSITE	PS01073	RIBOSOMAL_L24E	coord: 261..278
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 72..90
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 7..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g06710.1	Moc04g06710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003735	structural constituent of ribosome