Moc03g29980 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g29980
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA-(apurinic or apyrimidinic site) endonuclease
Location	chr3: 21364789 .. 21378455 (-)
RNA-Seq Expression	Moc03g29980
Synteny	Moc03g29980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGTGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGTTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGTAACTAGATTTCTGCCTCACTCTTTGCTTCACCTTGTGCGACGTTGATAATAGACGCTGATATTTTGTTCTATTTTCCCTTGGTTTTGGTTGTCTTATGAATTTTCATGAATGTGTGTTTTGGGTATGTACTATTTGGGGATCATGCAAGATTTTTCACTAGTAAATGCGAGTTTCTTTTTCCCTTCTGTAGCTGCGAGGAATTGATGATTCCTGGAATGTGCTGGTGGCATGTTTTATACTGGTTTTTTGTTTTTCTGGCTGCAAGGAATTAGTTACTGGATGTGTTGGTTTAGTTGCTTAATTTGACACGTTTATCTTCCATCTTTCTCTCTCTCTTTTTTTCTTTAAGAAAGTTCATGCAATAGCTCTTTGAAATTTAATAAATCGCAAATCCTGTCAATGGTTTCTTTTAAGATGGGTGTGGATGCATGTGCACCTGATGATGTCATTTTTGACGTTTCTATCTCAGTGGGATATATGCTATAAGTTTTGTTATGCTGTGTTTTCAGTCATTAGATAAGCTTTATGGGGACGATGACTTGATTTCACTTTTTCATAGTCTAGTATTTAACAATCATATGGCCGTGGTCCTGTATGGATTGAAGTCAATCAAATCAGTTATTTATTTGATTAATCCATCTCATACAGACTTCTTTATTCTAGTAGTCATCTGATACATTATCTTGTAGAACTACATAAGATGCAAATTATTCCCTTACATGGGCTATGACCTTATCATTGATTACTTCCACACTAGGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGGTAGGATTTTTTTTTCTGTTACTAAAGGTTTCTGGATGAGCAAGAAAGTTGGTTGTGTCGGGCAGGAAAGTGTATGCACGCACTTTGAATTTAGTCTTGTTCTGTGCTTTTATTTAATTTTTACATGAATAAACTTGTTAAGTAAAGCATGTGAAGATTGGTTCAAAAATTTATTTGATAAAGTTGGTGAATAATAATAGTCCGAATTCCAATGGATGAAAATAAGAGCTAAGATTGATTTATTTTTGTAACCAAAGCAACTTGCCAAATTCACAAGTTGAGAATTAAGAATTTATGGTACGTCTATTGGACTCTTTTTCCGTTTACCGGAGGCCGTCGAATCATTCTGATTCCGGCTGGTTCTGATAAGCTAGGATGGAGGGACTTTTGGACTATGCTTAGAAATTTTTCGGCAAAAAATGCAGAGAATCAGATGCTGGAAGCGGCAAATCTTAGAAAATAAAAAATCGAAGAAACCATTGAACCGGTTAAAAAAGATGTTAGGTTTAAGAAGTGTGCAATATTCCTTCTTTTGCAGAAGTAGTTAAGCGAAAAGCAGTTTCATCACTCGATTGTGCGATTATTCAACCCATCTTTGAAGGAAGCAGACTTAAGGCCGTACCTGATGAGAATAGATACCGTGAGTCTCACTCCCCTCGCCAGAATGATCAGAAGATGAGTGATAACAAGAAAAGGGTACCTGAACTTTGGATTCAGAAGGAAACAAAAGTTATTCATGTGGATTGGAACAACTTAATGATTGTTTCTAAGAGTTGTGCTCATGACGATTGGTATAAAATAGCTTTAGCCTTGAAGGAAAAGTATTCTCAGCCTTGTGTGCTCAATCCGTTTATGGCTGATAAAGCTTTGCTCAAGTTTAGCAATTACAGAGTATTAAATTCAAAAGAGTTAACTGGCAATTGGATTCCAGTGGTGAGTTTCGTATTAAGATTGAAATATGGAATGAAGATCGTCATTACAGACCCGAATTTATTAGAAGTTATGGGGGTTGGATTAAAATCATTGATCTTCCTTTGTCTTTATGGGATTGGGGATGTTTCGAAGCAATCGGGAAATATTGTGGTGGGTGTTAGGCCCCTCATAACCAAGACATATCATAGGAACGGAAAAAGGGGAATGTTGGGAGTATAGGCCATAACGGCCAGGAGAGAGAATGTTAGTAGCTGTTGTTAGGGAGTACAGTTAGGGTATAAGTTAGGGTATAAGGTAGGGAGGAGGTTGTAGGGAGGTTTTATTTTTTGGCTGAATTGTATTTGTCTTGTTAAGCAAGCGAGGGAGAGTTTCCCCACCCTCTCGAATAGGTGGGTTAGTGTCTTGTAAAGCCTTAGGGCTCCTTTGTTCTTGAAGTAATAGAAATGGTGAGGAGATACCTCACAAATTGGTATCAGAGCAAGTTTCGGTGCTGGGAACTGTGAGGAAGCATGACGGTCAAGGAGTTGGAGACACGGTGCGAGGCAGTAGAGCAAGAGATTGTTAGTGTGAAGTTGGAAATCGCATTGCTACATCAAAGGTTCGATGAACAACAGAAACAGATAGAGAGCCTCCATGTAACGCTGAAAACGTTCATGGCCCAGACTATTGGAGGATCCCCGTCGCAATCAAACTCCTTACTCACAGGGGAGACATTGATACGGAAAGGGAAGGAAGTTGCGGAAGATGTCCCGGCGAACAACAATGAGGCTCAGGGAAATGATCGGAACCGCTTCAAGAAAGTGGAGATGCCTATTTTCGGGGGAGAAGAGCTGGAGGCCTGGATCTTCAGAGCGGAACGATATTTCGAGATACAGAAACTGACCGATGAAGAGAAAATGATCGTTGCCATCATCAGCTTCGATGGAATAGCGTTGGCCTGGTACAGATACACGGACAATCGGGAGAAACACCAAGATTGGAATGATCTCAAAGGTCGACTGCGAGAAGTTTCCATCAGGCGAAAGAGGGAAGACAATGCGCGAAGCTCCTATCGCTGAAACAGGAAGGGAGTTTTGCAGAGTACCGGCAGCAATTTGAAGCTCTCGCGGTGGCGCTACCGCAACTAACTGACGATGTGTTAGAGAGTGCATTCTTGAATGGGCTGGACTCAATTGTTAGGGCTGAGATACGAGCGATGGAACCAAAAGGCTTGGATCAAATCATTCGCAAAGCCCAGCTGATAGATGACATCAACACGGCGATGATGGAAGCGGACGGCCAGATGATTAAAGAAAAAGCCTACACCGGCCCAGTTGCCAGCAAGTTGGCCCAAAAACCCCATGAGGTAATCCCCACACACACGGTCACCCTTACGACTAAAAACCCTAACTCTGTGCAGGGAGCAAGTACGACCCACACCGCCAAGAAGGAAACACCGTATAAGAAATTGACGGAGGCTGACTATCTGAAACAGAGGGAATGAGGGCTGTGCTTTCGCTGCGAGGAAAAATACACCGTCGGACACAAGTGCAGAAATCGAGAACTTCGAGTATTTGTGGTACACGACGACAAGCTCCTAGAAATGGAAGACGATTCAGTTATGGAGACGGAGACGGAAATGACAGGAGAGTCGAATGGAAGAATGGTAGAATGCCAATTAAACACCATTGTGGGCATCTCGACCCCAGGGACAATCAAGGTAAGGGGTTACTGCTAGATAAAGAGGTAACTCTTCTTATTGATTGTGGAGCCACCCACAATTTTATATCTCTTCCCCTCGCAGATGAATTGAAATTACCTAAGACAAAAACGATAAGTTATGGAGTCATCATGGGATCCGGAACAACAGTCAAGGGCCATGGAGTGTGCAAGGGCATTGTTCTCTCACTACCGGAACTTACAGTTAAAATGATTTCCTACCGTTGGACCTAGGCTCGCTGGATGTGGTATTAGGAATGCAGTGGCTCCAGACGATGGGGAAAATGGAAGCGGACAGGCCGGCGCTGACCCTCAGGTTCCATCGCGGCGAGAAGCAGATTACTATTAAGGGCGATCCTACCTTAGCACGACTGGAGGTGTCAATGAAACGCCTAGCTAAGTTATGGGAACCACAGGATCAAGGCTACCTAATAGAGATGAGGATGTTGAATGCTCAGCCAGACGAGATGGACCTGGCCCAAGATCAAATGTCCCCCAAGATAGAGGAACTCGTGCACGAGTACCTGGATGTCTTCCAGAAACCGGAGGAGCTACCTCCAGTTAGGACGACAGACCACCGTATCCCATTGCGAGAAGGTCACCCACCTGTGAATGTGCGTCCGTACCGCTACCCACATGCCCAAAAGGACGAAATTGAGGAAATGATAAACGAGATGCTAGCGGCGGGAATTATTAAGCCCAGCGTCAGCCCGTTTTCCAGCCCTATAATCTTAGTGAAAAAGAAGGACGGGAGTTGGCGCTTTTGCGTCGATTACAGAGCGTTGAACAATGCCACCATCCCTGATAAGTTCCCGATTCCAGTGGTGGAGGAGTTACATGGATCGAAAGTCTACTCGAAGATTGATTTACGATCAGGCTACCACCAGATCCGGATGGCGGCTGAAGACACGTATAAAACAGCCTTCAGAACCCATGCAGGGCACTATGAATTCTTGGTGATGCCATTCGGGCTAACCAACGCCCCCTCGACATTTCAAGCATTGATGAATGACGTGTTTAGACCGTATCTGCGCAGGTGCGTACTGGTTTTCTTTGATGATATCTTGATTTACAGTTCTGACATGGAGACTCACCTGCTTCGTTTGGCCATGGTATTTAACACCTTGCGGGAGAACTCGTTACACGCCAACTTAAAGAAGTGCCAGTTCACGGTAGAAAGGATTGAGTATCTGGGGTATTGGGTGTCTGCGGAGGGAGTAGAGGCGGACCAGCTAAAATAACGGCGATGCTACAATGGCCCGTACTCGCCAATGTGAAGGAACTCAGGGGGTTCTTAGGATTGACGGGGTACTACAGAAAATTCGTGGAAAACTACGGTACCATCGCCGCCCCACTAACTCAGTTGCTTAAGAGAGACGGATTTCAGTGGGATGATCAAGCAACAGCAGCCTTCGAGAGGTTAAAGGCAGCGATGGTTACCTTACCGGTATTGGCCCTTCCAGACTTTAGTGTGCCCTTCATCATAGAAACCGATGCGTCGAGAACGGGGTTGGGCGCCGTATTAACCCAGAATCAGAGACCAATTGCTTACTTTAGTCATACTTTATCACTCTAGAATCAGGCAAAGTCAATCTATGAAAGAGAATTGATGGCAGTGGTGTTGGCAATTCAAAGATGGAGGCCTTACCTATTGGGGCAGCGATTCATAGTGCGGACGGATCAACAAGCACTAAAATACTTGATGGAGCAATCCAACCTGAGTACCAGAAGTGGATTTCGAAACTATTGGGCTATGACTTTGAGATACAATACAAACCGGGAATGGAGAATAAGGCAGCTGATGCCTTGTCTAGGAGACCACCACCTGCACAATTGGCGGTTTTATCAGCGCCAGCAGTGGTGGACATCACGACCATCCGCCAAGAAGTTACTGCTGATCTGCACTTTGCCAAGATTCTAGAGCAACTAAAGGAAGATCCTGATAGTGTCCCGCGATTCCTAGTCCAGCAAGGTACCCTCTACTATAAGAATCGGATGTTAGGCCCTTCGTAACCAAGACATATCATAGGAAGGGAAAAAGGGGAATATTGGGAGTATAGGCCATAACGGCCAGGAGAGAGAATGTTAGTAGCTGCTGTTAGGGAGTACGGTTAGGGTATAAGGTAGGGAGAAGGTTGTAGGGAGGTTTTATTTTTTGGCTGAATTGTATTTGTCTTGTTAAGCAAGCGAGGGAGAGTTTCCCCACCCTCTCGAATAGGTGGGTTAGCGTCTTGTAAAGCCTTAGGGCTCCTTTGTTCTTGAAGTAATAGAAATAGTCAGGAGATACCTCACAAAGGGTTTGTAGGAATCTCAACAAAGACATTGAACCTTCTGGATGCCTCTGAAGCTTTCATCCAAGTTGCACCGAACAAATGTGGATTCTTACCAGCAGCCGTTAAGCTAAGCCATAAGAAGCTTGGTCCAATTACAGTACGTATTTTGGACTGCAATCAATCTAATTTCTCAAAGCCAACCGGTTCATTGAACGATGTTCAGAATTCACCTAATCCTTTGGAATTAGCCAGATTCCATACGGTTATGGATATTGAAAGGTCCATTACGGATGGCTTTGATATCTATTCCAATATGAAACACTTTTTTCAGGACCAAGAATTTTTTGAAACGGTTGATCTTCCCAAAGTAGACATTAATGTCGAAACTTTAAAAAGGAAAGAGCAAGAGGCAGTTTCACCTAAATGGTTGGAATTTATTGGTAGGGATTCAAGGGTTTCTAGTATTAATGAACCTCCTGTTTGCAGCCCAAGGAAAATTAAGGGATCCTCATTCCCTATTGAAGAAAGGAAGGCAAACGGTCGTGTGACTTCTCTCCAGTTTTTTTATTCAAGAAAAAGGGGTAAAATGATGGCCAATAAAGATACTAAGGAATTAGCTACGGTTGAGAGTTTTAAATCAAATTTATTGGCAGCTTTTTCAATGAGGAAAGAGATAACACTTCCCTAGATACTATACCGTTTGAGAAACCAGCCATGGTTGAAGGTTTAAAGTCAGATACATGCATGGCATTAGTTGAAGAAAGAGTAAGCTCTCCTATTATTACATCGGGTCTATCAGCAACTCTTCATGTCCGTTTGCCTCCCTCTTTATCACAAGGTGTAATCAATTCTAATAAGGATCCAGCCCCTTCGCCTCCTTCTTCTAAGATTTCTATTGGAGAAGATTTTGACTCGGATTTTAGCGTTAGTAGTCCGGATTATTCTCCGGTTGCCAACTCATTTGAAATTCCAGATGAAGTGTTATGCGAACAATCAATGGAGACAGATTTGCAGAAGTTGTTTCATGAGTCATCAGAAGGCGAAAAGTCAGAGTTAATCCCTCCATTCTTCGAAAAAGCAGGCATTAATCTGGTTCCAATCTCTGGCTCACAATGAAAGCTATCGCGTGGAAAGGAAGAGGTCTGTGTTAAGATGAAAATGATTGAAGTTCACGAAGCTTTTCCAAAATCAATGTCCAGATTTAGTATACCTTCAAGAAACAAAGATGGAGCAGGTTGATCCTTCAGCAATCAAATCCTTATGGAGTTTTAAAGATACTGGCTGGTTGTCTATTGATGCACTTGGAAAATCGGGAGTCACCCTATTAATGTGGGCTGAAGGGTGAATCAGTGTGAAAGATGTGATGAAAGGGGGTATTCTTTATTGGTCCTAACCTCTTTTTCTGATTTTGATAATGATCGGCTTTAATCTGTTTATGGTCCAACAGATTATAAGGAAAGGAAATTCTTTTTTTCAAGAACTTCGAGATTTTTCAACACTCTCTAAAGTTGTTGGTGCATAGGTGGAGACTCTAATGTTATTCGGTGGCCTTTCGAAAGATTTTCTTGTTTTCGCTCAGCAATAGCCATGAATAGTCATTTTCCCATCATTCTGGAGGCGGGAGATTTTAAATGTGGCCTTGGTCCCTTCAGATTCTTCAATTCGTGGTTGCAAGATAAGGAGTGCATTGGTATTATTGAGTCTAAGCCTGCGAACGATTACTCTTAGAAGACCTAACGCATTATGGCGCAAAGTGATAGCAAGTTTATATGAGGAGTCTGATTTGGGTTGGTCTTCGGGTATCATGTTGATTGGCAGCAAGACTTGATTCAGGTACATCTATTCTGTTTTGGCTGCACTAATGGGCTGGAGATCGGTCTCCTCCGGATTGCTTCCAAAGTTCTTCAGGCTTTCCCTCCACTCTAGGGTCTGCGGCAGATTCTTGGGCTTCTCATGCATTATCTAGGGGAATTTTTTCTTATGCTCTTATGCCTTTATGCAAGTCTGTGCTGGAGTCTTTTTTTAGAAGAATTTAATCTGGTTTGGTTTTTGACCAAAAGATGGCAGATAACTTGTTTCAGCTTCTATCGGGGCCTATTTTGAATCCTAAAGAGTTTATCCCTCGATTAAATGAAGTTAAAGGCACTAGTGCATGAGTTGTGGTATGAAAGAAACTTGAGATTTTTGTTGAAAAGAAGCAGCCTCCTTCAGTACGCTTGGTTCCAGCTAAATTCAAGGCTTCCCTTTGGAGTTCTTTATCTTCTCTATTTAAATCTTTTTCCCCAAGTTTGATTAGTGTGATTATCTTGTTTTGGGGTGCTTTTATTACAATTTTATGAGTTTTGGATTTATTTGTAATTTATGCTTTTTCACTCTTTCGGGAGTTTGTATCTTTGAACAATTTTGTTCTCATTATTTCAATGAGAAGTTCGTATCTTGTTCAAAAAAAAAAGATTGATTTATTTTTGTTATTTTGAGGTATGGGGTTATTTTTAATAAATTTCGTAACGCAATTCTTTGATTAAATAGTCAGTTGGAAGTCTATTGGGTGTCTTGAAGTTTGAATCTAATTGAATTTTTAGTTGTAGCTCAAGTCTTGGAGGATTTGTAATTGAGTTATGGCTATCTCCAATTATGCAGAAGAATCAGTGTTCTTGGTGCAAAATAGCAATTATTACTTATAATACAAACCTAAAATCATGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAGGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGGTATCTTCTCTTCTTGATGTATTGGGACATTTGATGTTGTGCTATTTCATTATGCATTCTTGTGTTCTTTTATTGACGTATTGATGCATGCAGTGTCCTGATGTCTTATAATCATCTTATGCTATTTCCTTACCATGAACTTTATCATTAATTAGTACTGTTAATTCTTATATGTTTTTTGTTTAGCAAACTTTTAAATGTTGGAGTAGTTTGTCAGTGCTGAGGTCATCCAATGTGTATCCTCCATGCATTCGGTTACTTCTGGGAAAGTTCTTTTTCGAGATTTACTCTTATTATGCCCACATTTGGGTCCCTTCGGGGACATCTGATTATGCACACGTTTGGTCAATATACTATATGGATTCTTGATTCATTTCCAAATGGACTTGATGCTTTATAGAAATATTTTTTTGTATTCAACAGGTCTACGTGAGAGGAAATTTCAGTTTCCTTCTCCTTCTTCTCCTTCTTTCATTTTTATATCCTTCTATTTTTGCATTATAATTTTATTTTTTTATAAAAATAAACAAGTATCTTAACAAAAGAAGGAATATAATAGGTATAAATCCAATAACGAAGAAGTTATGAATTCCTTCTCCAAGTAGCACAAATAGAAGTAAGACCATAGTTACAAAAATCTTTATGAAGTGAGGTCAAAGAGTGAAAAAAAATTAAATTATTGTACTCCCAATTCCTCATTGAAGTCCTGTAGCCCTATTAATCCATCCGCTTAAAGTTTCTTCTACTCCTTTCTAGCTCACAGAAGGTAGCCTTGTACTATTAAACAACAAAGGTCTTTTTTTTTGTTAAATCTTTATTTAAAATGCGAAACTGCAGATACGTGAAGGAAGCTGACAACTCCATTTCTCAGCTAAATTTTCAAATCTCTCTCTGCTGTAAAGCTGCTTATTGTTTAGTATTGCTGAGCCGACTTTAGATCATATAAAATTAGTGTTGATAATCAAGACATGCCTGGTTTCTTGATCTTCATTTTTATGTTAATTAATTATGGGACAAATAAATCGGTCTAGTCATGTTCTGAAGTTCAAGGGATATTTTATCTTTTATTTCACATGTCCGTGAGGAAGAGCTATTAAATCATACAGGTGTCCCTGTTTGTAGCTTTAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAGGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGGTAAGCATTCTTGATTAATTTTTGAAGGTTGGTCCATTCCGTGATCTTTCAATTTCTTTCATTTATATTGTAATCAACCTGGACTATGTTCTATCCACTATTTGAGTGCTTCTAGCTAGGTGCTTGAAGTTTTCGGACACAAAATATTGTTTTGCCTTCATGGATCTAACTCAATTAACTTTTAAAGTTGGTTAATCATCTTGCATAGTAATTCATATGTAATCATGAAAAATGCCTGTAGATCCGAATTTGTCTTGAAAGGATAGAAAACATCTAAGAACTCATATTATGCAAAAATCTTTAATAATTCTCTTTGCTCCCCGCCCCCCTCTTCCTTTAAGAGAACCTGTTCAAATTAAGACTTCTTTACAAGAGTACACATCTAAGTGTTGGTAATAAAAATAAGTAGAATATTTCAAATGGATTGTGTTTAAATTTACTCAATTTGATTTTTGTTGCATTAATTTTATTGTGCAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGTAGTGAAGCTTGCCGTATAGAGCTCTGGCATATTCATTTCCCCTAGAATTTACATAAATGGTTGTCTTTGTTTCTCTATTAATACCGACGAGGTTTTATTTTTTTTATTTATTATTTTTTTTAAGATTATTATTCGGTTATCTATGTGGACTTGCATTCATTTAGAAGTATTTACGTTTTGAAACTTGATTGTATTAATATTCATGGGGTTCCATCTCAAAACCAATTGGTTAGGAGAGGAGTAGCCTCTTTTCAATGTGGGATCCTTAACATGCCCCTCAAGATCGTAGCTCTTTTGGCTCATCGGTCTTGGCCGGATCCTATTTGTTTTGGATCGGATGCTCATTTGAGCGTTTTGGACTTTGATACCATATTAATATTCATGGGTTCCATCTCAAAACCAATTGGTTAGGAGAGGAGTAGTCCATGTCTATTATAAACCATTGTTAGGTCCCCTCTCTTTTCAATATGAGGACCTTAACATGCCCCCTCAAGATCGTAGCTCTTTTGGTCATAACTGAAATGATAGTCATCCGATGAAGTCATTGATTGAGGGATAGAATAGAATTCTATGTGAAATTCTGCTTCGTACAGGAAAAGAGGGATTACTGAGTACCATTTCCTTTTATGCCTTTTTTCATGTTTATTTTTGTTTGTGTCCGTCCAATACAGAGAGTGTGTGTGTGGGTATTTATTGAGAATGAAGATAAGATCAGGAACAACACCAAAAGTTTCCTCAGATAGCATTCTTTTTCCAATACAGTATTTATTTTTATAAAAAAAGAACAGAACAAAGATTGAGAATTCCTTCTAGTATTTTATTCCCAGAATATAAAATAATCAGACGACTACTCAATTAGTTTCTTTATGGTGCAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGTATGCAATTTTTTGTAGAAATGACCTTCTGTTGATTTTTGCTTGCATGCTCGTAGTGGCACTTTAATCTGCTCCTTTTAATTATTTTTTTGCTGGGGGTACGAAGTCCATTTAAAAAGTTAGCTGTTTCAGGTTGTTATAATCAGTCTTCAGTTATCCTTTGCAACTTTCACTTCACCCGACTACATCTCTTCTCTTAATACCTCCTGATTTCTAATAAACACAACTACTGGTTTCATAAAATTCTTATCTAATCCAAAGGGAGAGAAATATGTAGTGGTTTCCCTTCTTGTTATCTTGGTATAAAACTGGTTATCTTTTGCCTTCTGCGTGTATTATGTTCCAGGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTAAGAAAGATATACATTATGGATGACTCTAATTTACTACTTATTTAACCAGAAGTACTACTCCCTGTATTCTTTGGCTTACCATGTAGTGATATCATCATTGTTAAAAGCTGTTAGTTATGTTAACTAAATAATTACTGAGTAGGATCTGCGTCTACAACTATACAAGTTCAGATTTGGAAATGTTTGTTTTTTTTAATGAAATAAAGAAACTGTTATATCAATTGATATAAGCATCTATGCCTCCATCCTGTCCCGTTGACACCTCTAATATCATTGAGACGGGCGTCTGTTACATTCTTTTGGAGAGGTTTTCGCAGTATGATGTTCAATCTACTCATACCATTATGGAGGACTCCTAGAGTTTACTTGGTTAGGAAAACTAAAACCTGTTCCTATCCATGTCTAAATCAGATCCCATCTCCACTGAAACTGAACCGTTATGTCCAGTATTTTTCTTTGAAAGAGTTAGGAAACAGTAGTCCTTCCTTTATCCAGTCTGGCTGTAGTTATCAAGTTGGAGCAGTATGATGTTCAATCTTCTCATACCATTTTCGTCATGTTACTTGAAAGGAATGGAAATGAGGAAATAAAATTACCATCCTGTTGTTTACTAGTTTCATCTAAGAATGGAGAATGGTTTCCAATTTTCTGGAATTCACACCAAAAATGGAAATCATGCTCCTCAGCTTGTAAGCTGTTTTCTTCTCACCTCAATAAAGCTTCTGTTTCTTTCTTACCAAGAAAAAATGATTATATATATTTCCAGGTATCGAGGCAAAAGGATGAGAATCGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTGCACTTCGCTTCTTTTCCATTATTTATGTTTCTTCATATGCATCTTAAGAATTACTCATGCATAGTATAACATCAAAATTTAACCATACCTCAGAAATCTGGCTAATGAAATTTTAACCATACCTCAATTCCCTTCTGGGTTTGGGTTTTGGGCTCATAGGTTCTGTCTTTCGCTAGTCAAGTCTACTTTTGATACAGATTTTCTAATCCTACGAATTGAAACAATAAAATCACACTACTAAATTCACTTCTAACCTACGCTCTACAAATACTTAGTTTGCAAAATAAAAAACAAGAAAAATTCAGACTTTTGAAACTCACGACCATCACAGGTTGGCCTAGTAGTCTAAAGGAGTCAAAGTAAATTTTAAAGAATTTAGAGGAAATGTGTTCAAACCATAGTGGTCTGGCCATCCACCTGGGATTTAGTATCCGACAAATTTTTTTTACAACTAAATGTAGTCAGGTTTGGTGGTTGTTTCGGAATTTTCTTTTTTTATACAAAGCTTCAAACTAATGAACCAACTAACATCCTCCGTGAAGACTTACAATACGGCTACTATTTTATCTCTTAATATGACTGCGAAAGCGATGTTACTTTGACAGTGATCTTGAATTCATGTAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCTTGTCCTGAGTCTCAAGAAAACTGA

mRNA sequence

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGTGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGTTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAGGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGCTTTAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAGGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTATCGAGGCAAAAGGATGAGAATCGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCTTGTCCTGAGTCTCAAGAAAACTGA

Coding sequence (CDS)

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGTGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGTTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAGGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGCTTTAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAGGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTATCGAGGCAAAAGGATGAGAATCGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCTTGTCCTGAGTCTCAAGAAAACTGA

Protein sequence

MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN

Homology

[Close]

BLAST of Moc03g29980 vs. NCBI nr
Match: XP_022137368.1 (DNA-(apurinic or apyrimidinic site) lyase [Momordica charantia])

HSP 1 Score: 741.9 bits (1914), Expect = 2.6e-210
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA
Sbjct: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL
Sbjct: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN
Sbjct: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 359

[Close]

BLAST of Moc03g29980 vs. NCBI nr
Match: XP_004152506.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus] >XP_011651906.1 DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 336/361 (93.07%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGD--DSEASVPDKKEPLKFITWNANSLLLRVKNDW 60
           MKRFFKPIEKEGSSKK ALSPSLKDGD  DSEASVPDKKEPLKF+TWNANSLLLRVKNDW
Sbjct: 1   MKRFFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDW 60

Query: 61  PEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPF 120
            EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+TSREEKQMLMRALSSPPF
Sbjct: 61  SEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPF 120

Query: 121 ANYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNT 180
           ANYRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNT
Sbjct: 121 ANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180

Query: 181 YAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240
           Y+PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA
Sbjct: 181 YSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240

Query: 241 KLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIG 300
           KLNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDA+RFLHKEKDMERGFSWSGHPIG
Sbjct: 241 KLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300

Query: 301 KYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQE 360
           KYRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+
Sbjct: 301 KYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQK 360

[Close]

BLAST of Moc03g29980 vs. NCBI nr
Match: XP_008439197.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_008439208.1 PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_008439217.1 PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo])

HSP 1 Score: 693.0 bits (1787), Expect = 1.4e-195
Identity = 333/360 (92.50%), Postives = 345/360 (95.83%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDG-DDSEASVPDKKEPLKFITWNANSLLLRVKNDWP 60
           MKRFFKPIEKEGSSKK ALSPSLKD  DDSE S PDKKEPLKF+TWNANSLLLRVKNDWP
Sbjct: 1   MKRFFKPIEKEGSSKKPALSPSLKDNDDDSELSAPDKKEPLKFVTWNANSLLLRVKNDWP 60

Query: 61  EFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFA 120
           EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+ SREEKQMLMRALSSPPFA
Sbjct: 61  EFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNISREEKQMLMRALSSPPFA 120

Query: 121 NYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTY 180
           NYRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNTY
Sbjct: 121 NYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180

Query: 181 APNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240
           +PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK
Sbjct: 181 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240

Query: 241 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 300
           LNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDAYR+LHKEKDMERGFSWSGHPIGK
Sbjct: 241 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAYRYLHKEKDMERGFSWSGHPIGK 300

Query: 301 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           YRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+N
Sbjct: 301 YRGKRMRIDYFIVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQKN 360

[Close]

BLAST of Moc03g29980 vs. NCBI nr
Match: XP_023519158.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 692.6 bits (1786), Expect = 1.8e-195
Identity = 331/359 (92.20%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAAL+PSLKDGDDSEASV DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALTPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPD+IAIQEVRIPAAGSKGA KNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDIIAIQEVRIPAAGSKGASKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEAFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMERGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESL  RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEASSCPESQ++
Sbjct: 301 RGKRMRIDYFLASESLADRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASSCPESQKS 359

[Close]

BLAST of Moc03g29980 vs. NCBI nr
Match: XP_022923651.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucurbita moschata])

HSP 1 Score: 692.6 bits (1786), Expect = 1.8e-195
Identity = 332/359 (92.48%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASV DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPD+IAIQEVRIPAAGSKGA KNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDIIAIQEVRIPAAGSKGASKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEEFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMERGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESLV RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEAS CPESQ++
Sbjct: 301 RGKRMRIDYFLASESLVDRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASFCPESQKS 359

[Close]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot
Match: Q5XF07 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Arabidopsis thaliana OX=3702 GN=APE1L PE=1 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 6.2e-162
Identity = 269/362 (74.31%), Postives = 315/362 (87.02%), Query Frame = 0


Query: 1   MKRFFKPIEKEGS--SKKAALSPSLKDGD-DSEASVPDKKEPLKFITWNANSLLLRVKND 60
           MKRFFKPIEKE S  +KK  LSP  +DGD D      ++ EP KF+TWNANS LLRVKND
Sbjct: 1   MKRFFKPIEKENSPAAKKPCLSPEKRDGDGDGVEEEKNQNEPSKFMTWNANSFLLRVKND 60

Query: 61  WPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPP 120
           W +F+K VS+ DPDVIAIQEVR+PAAG KG PKN  EL DDT   REEKQ+L RALSSPP
Sbjct: 61  WSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTKVLREEKQILTRALSSPP 120

Query: 121 FANYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLN 180
           F NY VWWSL+DSKYAGTAL +K+C +P+KV+FNLD++A KHE DGRVILAEFETFRLLN
Sbjct: 121 FGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLLN 180

Query: 181 TYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSA 240
           TY+PNNGWKDEEN+F+RRRKWDKRI+EF++++SDKPLIWCGDLNVSHEEIDVSHP+FF+ 
Sbjct: 181 TYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSDKPLIWCGDLNVSHEEIDVSHPEFFAT 240

Query: 241 AKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPI 300
           AKLNGY+PPNKEDCGQPGFT +ER RFGA +KEG+L+DAYR+LHKE++ME GFSWSG+PI
Sbjct: 241 AKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPI 300

Query: 301 GKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ 360
           GKYRGKRMRIDYF+VSE L  RIVSC+MHG+GIEL+GF+GSDHCPV+LELS+ SS  E +
Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLELSKPSS--EME 360

[Close]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot
Match: P43138 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 9.5e-30
Identity = 101/348 (29.02%), Postives = 162/348 (46.55%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKN---DWPEFT 65
           K  EKE + +   L    +D  D + S   K   LK  +WN + L   +K    DW    
Sbjct: 30  KKTEKEAAGEGPVL---YEDPPDQKTSASGKSATLKICSWNVDGLRAWIKKKGLDW---- 89

Query: 66  KLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYR 125
             V    PD++ +QE +                          +  L   L   P   ++
Sbjct: 90  --VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLTHQ 149

Query: 126 VWWSLSDSK-YAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYAP 185
            W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEFE+F L+  Y P
Sbjct: 150 YWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFESFILVTAYVP 209

Query: 186 NNGWKDEENSFKRRRKWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 245
           N G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P        
Sbjct: 210 NAGRGLVRLEY--RQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNP-------- 269

Query: 246 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 305
                 NK++    GFT  ER+ FG +L+   L D++R L+        F W+     + 
Sbjct: 270 ----KGNKKNA---GFTPQERQGFGEMLQAVPLADSFRHLYPNTAYAYTF-WTYMMNARS 316

Query: 306 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
           +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 330 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 316

[Close]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot
Match: P28352 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 101/348 (29.02%), Postives = 162/348 (46.55%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKN---DWPEFT 65
           K  EKE + +   L    +D  D + S   K   LK  +WN + L   +K    DW    
Sbjct: 30  KKTEKEAAGEGPVL---YEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDW---- 89

Query: 66  KLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYR 125
             V    PD++ +QE +                          +  L   L   P   ++
Sbjct: 90  --VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLTHQ 149

Query: 126 VWWSLSDSK-YAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYAP 185
            W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEFE+F L+  Y P
Sbjct: 150 YWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFESFVLVTAYVP 209

Query: 186 NNGWKDEENSFKRRRKWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 245
           N G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P        
Sbjct: 210 NAGRGLVRLEY--RQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNP-------- 269

Query: 246 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 305
                 NK++    GFT  ER+ FG +L+   L D++R L+        F W+     + 
Sbjct: 270 ----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTF-WTYMMNARS 316

Query: 306 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
           +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 330 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 316

[Close]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot
Match: A1YFZ3 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan paniscus OX=9597 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-29
Identity = 100/349 (28.65%), Postives = 164/349 (46.99%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSL-KDGDDSEASVPDKKEPLKFITWNANSLLLRVKN---DWPEF 65
           K   K+   + A   P+L +D  D + S   K   LK  +WN + L   +K    DW   
Sbjct: 27  KTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDW--- 86

Query: 66  TKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANY 125
              V    PD++ +QE +                          +  L   L   P  ++
Sbjct: 87  ---VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLSH 146

Query: 126 RVWWSLSDSK-YAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 185
           + W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEF++F L+  Y 
Sbjct: 147 QYWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFDSFVLVTAYV 206

Query: 186 PNNGWKDEENSFKRRRKWDKRIMEFVH-QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 245
           PN G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P       
Sbjct: 207 PNAGRGLVRLEY--RQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNP------- 266

Query: 246 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 305
                  NK++    GFT  ER+ FG +L+   L D++R L+        F W+     +
Sbjct: 267 -----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTF-WTYMMNAR 317

Query: 306 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
            +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 327 SKNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 317

[Close]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot
Match: A2T6Y4 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan troglodytes OX=9598 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-29
Identity = 100/349 (28.65%), Postives = 164/349 (46.99%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSL-KDGDDSEASVPDKKEPLKFITWNANSLLLRVKN---DWPEF 65
           K   K+   + A   P+L +D  D + S   K   LK  +WN + L   +K    DW   
Sbjct: 27  KTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDW--- 86

Query: 66  TKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANY 125
              V    PD++ +QE +                          +  L   L   P  ++
Sbjct: 87  ---VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLSH 146

Query: 126 RVWWSLSDSK-YAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 185
           + W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEF++F L+  Y 
Sbjct: 147 QYWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFDSFVLVTAYV 206

Query: 186 PNNGWKDEENSFKRRRKWDKRIMEFVH-QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 245
           PN G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P       
Sbjct: 207 PNAGRGLVRLEY--RQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNP------- 266

Query: 246 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 305
                  NK++    GFT  ER+ FG +L+   L D++R L+        F W+     +
Sbjct: 267 -----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTF-WTYMMNAR 317

Query: 306 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
            +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 327 SKNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 317

[Close]

BLAST of Moc03g29980 vs. ExPASy TrEMBL
Match: A0A6J1CA58 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 GN=LOC111008839 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.3e-210
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA
Sbjct: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL
Sbjct: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN
Sbjct: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 359

[Close]

BLAST of Moc03g29980 vs. ExPASy TrEMBL
Match: A0A0A0LR25 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G050040 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.1e-197
Identity = 336/361 (93.07%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGD--DSEASVPDKKEPLKFITWNANSLLLRVKNDW 60
           MKRFFKPIEKEGSSKK ALSPSLKDGD  DSEASVPDKKEPLKF+TWNANSLLLRVKNDW
Sbjct: 1   MKRFFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDW 60

Query: 61  PEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPF 120
            EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+TSREEKQMLMRALSSPPF
Sbjct: 61  SEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPF 120

Query: 121 ANYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNT 180
           ANYRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNT
Sbjct: 121 ANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180

Query: 181 YAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240
           Y+PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA
Sbjct: 181 YSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240

Query: 241 KLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIG 300
           KLNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDA+RFLHKEKDMERGFSWSGHPIG
Sbjct: 241 KLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300

Query: 301 KYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQE 360
           KYRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+
Sbjct: 301 KYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQK 360

[Close]

BLAST of Moc03g29980 vs. ExPASy TrEMBL
Match: A0A1S3AY74 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103484065 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.8e-196
Identity = 333/360 (92.50%), Postives = 345/360 (95.83%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDG-DDSEASVPDKKEPLKFITWNANSLLLRVKNDWP 60
           MKRFFKPIEKEGSSKK ALSPSLKD  DDSE S PDKKEPLKF+TWNANSLLLRVKNDWP
Sbjct: 1   MKRFFKPIEKEGSSKKPALSPSLKDNDDDSELSAPDKKEPLKFVTWNANSLLLRVKNDWP 60

Query: 61  EFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFA 120
           EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+ SREEKQMLMRALSSPPFA
Sbjct: 61  EFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNISREEKQMLMRALSSPPFA 120

Query: 121 NYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTY 180
           NYRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNTY
Sbjct: 121 NYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180

Query: 181 APNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240
           +PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK
Sbjct: 181 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240

Query: 241 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 300
           LNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDAYR+LHKEKDMERGFSWSGHPIGK
Sbjct: 241 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAYRYLHKEKDMERGFSWSGHPIGK 300

Query: 301 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           YRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+N
Sbjct: 301 YRGKRMRIDYFIVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQKN 360

[Close]

BLAST of Moc03g29980 vs. ExPASy TrEMBL
Match: A0A6J1E7C5 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 GN=LOC111431300 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 8.8e-196
Identity = 332/359 (92.48%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASV DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPD+IAIQEVRIPAAGSKGA KNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDIIAIQEVRIPAAGSKGASKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEEFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMERGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESLV RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEAS CPESQ++
Sbjct: 301 RGKRMRIDYFLASESLVDRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASFCPESQKS 359

[Close]

BLAST of Moc03g29980 vs. ExPASy TrEMBL
Match: A0A6J1KMJ1 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=LOC111495528 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 7.0e-193
Identity = 329/359 (91.64%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASV DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPDVIAIQEVRIPAAGSKG  KNQGELKDDTS SREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDVIAIQEVRIPAAGSKGVSKNQGELKDDTSASREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+K+C QPKKVFFNLDRIA KHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEEFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKED GQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDME GFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDYGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMECGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESL  RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEASSCPESQ++
Sbjct: 301 RGKRMRIDYFLASESLADRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASSCPESQKS 359

[Close]

BLAST of Moc03g29980 vs. TAIR 10
Match: AT3G48425.1 (DNAse I-like superfamily protein )

HSP 1 Score: 571.6 bits (1472), Expect = 4.4e-163
Identity = 269/362 (74.31%), Postives = 315/362 (87.02%), Query Frame = 0


Query: 1   MKRFFKPIEKEGS--SKKAALSPSLKDGD-DSEASVPDKKEPLKFITWNANSLLLRVKND 60
           MKRFFKPIEKE S  +KK  LSP  +DGD D      ++ EP KF+TWNANS LLRVKND
Sbjct: 1   MKRFFKPIEKENSPAAKKPCLSPEKRDGDGDGVEEEKNQNEPSKFMTWNANSFLLRVKND 60

Query: 61  WPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPP 120
           W +F+K VS+ DPDVIAIQEVR+PAAG KG PKN  EL DDT   REEKQ+L RALSSPP
Sbjct: 61  WSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTKVLREEKQILTRALSSPP 120

Query: 121 FANYRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLN 180
           F NY VWWSL+DSKYAGTAL +K+C +P+KV+FNLD++A KHE DGRVILAEFETFRLLN
Sbjct: 121 FGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLLN 180

Query: 181 TYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSA 240
           TY+PNNGWKDEEN+F+RRRKWDKRI+EF++++SDKPLIWCGDLNVSHEEIDVSHP+FF+ 
Sbjct: 181 TYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSDKPLIWCGDLNVSHEEIDVSHPEFFAT 240

Query: 241 AKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPI 300
           AKLNGY+PPNKEDCGQPGFT +ER RFGA +KEG+L+DAYR+LHKE++ME GFSWSG+PI
Sbjct: 241 AKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPI 300

Query: 301 GKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ 360
           GKYRGKRMRIDYF+VSE L  RIVSC+MHG+GIEL+GF+GSDHCPV+LELS+ SS  E +
Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLELSKPSS--EME 360

[Close]

BLAST of Moc03g29980 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-28
Identity = 94/319 (29.47%), Postives = 155/319 (48.59%), Query Frame = 0


Query: 33  VPDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQ 92
           +P+  + +K +TWN N L   +K +     +L    + D++ +QE ++            
Sbjct: 269 LPEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKL------------ 328

Query: 93  GELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSK--YAGTALFMKRCLQPKKVFF 152
            ++KD      E K+ L+             +WS S SK  Y+GTA+  +  ++P  V +
Sbjct: 329 -QVKD----VEEIKKTLIDGYD-------HSFWSCSVSKLGYSGTAIISR--IKPLSVRY 388

Query: 153 NLDRIALKHEVDGRVILAEFETFRLLNTYAPNNGWKDEENSFKRRRKWDKRIMEFVHQ-S 212
                   H+ +GR++ AEF++F L+NTY PN+G   +  S+ R  +WD+ +   + +  
Sbjct: 389 GTGLSG--HDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSY-RIEEWDRTLSNHIKELE 448

Query: 213 SDKPLIWCGDLNVSHEEIDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGAILK 272
             KP++  GDLN +HEEID+ +P              NK      GFT+ ER+ FGA L 
Sbjct: 449 KSKPVVLTGDLNCAHEEIDIFNP------------AGNKRSA---GFTIEERQSFGANLL 508

Query: 273 EGKLIDAYRFLHKEKDMERGFS-WSGHPIGKYRGKRMRIDYFVVSESLVGRIVSCEMHGQ 332
           +   +D +R   K+     G++ W     G+   K  R+DYF+VS+S     ++  +H  
Sbjct: 509 DKGFVDTFR---KQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS-----IAANVHDS 534

Query: 333 GIELKGFYGSDHCPVSLEL 348
            I L    GSDHCP+ L L
Sbjct: 569 YI-LPDINGSDHCPIGLIL 534

[Close]

BLAST of Moc03g29980 vs. TAIR 10
Match: AT3G60950.1 (C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase )

HSP 1 Score: 59.3 bits (142), Expect = 7.3e-09
Identity = 31/97 (31.96%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 143 LQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYAPN--NGWKD----EENSFKRRR 202
           ++P +V +        H+++GR++ AEF++F L++TY PN  +G K     + N+ +   
Sbjct: 502 IKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIE--- 561

Query: 203 KWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHP 233
            WD+ +   +      KP++  GDLN +HEEID+ +P
Sbjct: 562 DWDRTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNP 595

[Close]

BLAST of Moc03g29980 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-08
Identity = 42/154 (27.27%), Postives = 75/154 (48.70%), Query Frame = 0


Query: 33  VPDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQ 92
           +P+  + +K +TWN N L   +K +     +L    + D++ +QE ++            
Sbjct: 269 LPEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKL------------ 328

Query: 93  GELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSK--YAGTALFMKRCLQPKKVFF 152
            ++KD      E K+ L+             +WS S SK  Y+GTA+  +  ++P  V +
Sbjct: 329 -QVKD----VEEIKKTLIDGYD-------HSFWSCSVSKLGYSGTAIISR--IKPLSVRY 388

Query: 153 NLDRIALKHEVDGRVILAEFETFRLLNTYAPNNG 185
                   H+ +GR++ AEF++F L+NTY PN+G
Sbjct: 389 GTGLSG--HDTEGRIVTAEFDSFYLINTYVPNSG 394

The following BLAST results are available for this feature:

BLAST of Moc03g29980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137368.1	2.6e-210	100.00	DNA-(apurinic or apyrimidinic site) lyase [Momordica charantia]	[more]
XP_004152506.1	1.3e-196	93.07	DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus] >XP_011651906.1 DNA-...	[more]
XP_008439197.1	1.4e-195	92.50	PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_00843920...	[more]
XP_023519158.1	1.8e-195	92.20	DNA-(apurinic or apyrimidinic site) lyase [Cucurbita pepo subsp. pepo]	[more]
XP_022923651.1	1.8e-195	92.48	DNA-(apurinic or apyrimidinic site) lyase [Cucurbita moschata]	[more]

BLAST of Moc03g29980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF07	6.2e-162	74.31	DNA-(apurinic or apyrimidinic site) endonuclease OS=Arabidopsis thaliana OX=3702...	[more]
P43138	9.5e-30	29.02	DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 G...	[more]
P28352	1.2e-29	29.02	DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Ape...	[more]
A1YFZ3	2.1e-29	28.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan paniscus OX=9597 GN=APEX...	[more]
A2T6Y4	2.1e-29	28.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan troglodytes OX=9598 GN=A...	[more]

BLAST of Moc03g29980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CA58	1.3e-210	100.00	DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LR25	6.1e-197	93.07	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3AY74	6.8e-196	92.50	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1E7C5	8.8e-196	92.48	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KMJ1	7.0e-193	91.64	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Moc03g29980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48425.1	4.4e-163	74.31	DNAse I-like superfamily protein	[more]
AT2G41460.1	5.4e-28	29.47	apurinic endonuclease-redox protein	[more]
AT3G60950.1	7.3e-09	31.96	C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase	[more]
AT2G41460.2	2.8e-08	27.27	apurinic endonuclease-redox protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 6..349 e-value: 4.4E-70 score: 238.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 40..347
IPR004808	AP endonuclease 1	TIGRFAM	TIGR00633	TIGR00633	coord: 40..347 e-value: 2.4E-45 score: 153.0
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 29..351
IPR004808	AP endonuclease 1	PROSITE	PS51435	AP_NUCLEASE_F1_4	coord: 40..349 score: 40.901684
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 44..340 e-value: 2.8E-10 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..107
None	No IPR available	PANTHER	PTHR22748:SF10	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	coord: 29..351
None	No IPR available	CDD	cd09087	Ape1-like_AP-endo	coord: 40..347 e-value: 5.5098E-100 score: 294.075

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g29980.1	Moc03g29980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0008311	double-stranded DNA 3'-5' exodeoxyribonuclease activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008081	phosphoric diester hydrolase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004518	nuclease activity