Moc03g04760 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g04760
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RING-H2 finger protein ATL1-like
Location	chr3: 3550665 .. 3551135 (+)
RNA-Seq Expression	Moc03g04760
Synteny	Moc03g04760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGCCGCCACCGTCAGTGTTATCTCCGCCGCCGATGCCGTTAAACGCCGTCAGCCACAGTCTCTTTGGGGAATTGCCAAAACACGTTCAGATTTTGTGTGTGGTTGCTATGTTCCTCCTCGTTATACTCTACGTCTTCATTCTCAGGCTCATTCTCGACAGAAGCTGCGGATCCAACGGCGGAGAATTGCCGGAGGCGTTACCGCAGAAGAGGTTGCAGATTGAAGCTCCGATTTTCGCTTACGGCGGATCGGGCGACGACGACGAAGAATGTGCAATTTGCCTTAGCAAATTTGAACAAGGAGAGAAGTGCCGCAAAATGAGTAAGTGCGACCACGTGTTTCACCGGGACTGTATTGACCGGTGGCTGAAGGCGGAGCGCCACTGCCCGCTTTGCCGGACCAGTATTTGCATCGTCGTTCACGGTGGAGACAACATCGTCCCTCCAGCCGTCCCAAATGCTTGA

mRNA sequence

ATGTCATCGCCGCCACCGTCAGTGTTATCTCCGCCGCCGATGCCGTTAAACGCCGTCAGCCACAGTCTCTTTGGGGAATTGCCAAAACACGTTCAGATTTTGTGTGTGGTTGCTATGTTCCTCCTCGTTATACTCTACGTCTTCATTCTCAGGCTCATTCTCGACAGAAGCTGCGGATCCAACGGCGGAGAATTGCCGGAGGCGTTACCGCAGAAGAGGTTGCAGATTGAAGCTCCGATTTTCGCTTACGGCGGATCGGGCGACGACGACGAAGAATGTGCAATTTGCCTTAGCAAATTTGAACAAGGAGAGAAGTGCCGCAAAATGAGTAAGTGCGACCACGTGTTTCACCGGGACTGTATTGACCGGTGGCTGAAGGCGGAGCGCCACTGCCCGCTTTGCCGGACCAGTATTTGCATCGTCGTTCACGGTGGAGACAACATCGTCCCTCCAGCCGTCCCAAATGCTTGA

Coding sequence (CDS)

ATGTCATCGCCGCCACCGTCAGTGTTATCTCCGCCGCCGATGCCGTTAAACGCCGTCAGCCACAGTCTCTTTGGGGAATTGCCAAAACACGTTCAGATTTTGTGTGTGGTTGCTATGTTCCTCCTCGTTATACTCTACGTCTTCATTCTCAGGCTCATTCTCGACAGAAGCTGCGGATCCAACGGCGGAGAATTGCCGGAGGCGTTACCGCAGAAGAGGTTGCAGATTGAAGCTCCGATTTTCGCTTACGGCGGATCGGGCGACGACGACGAAGAATGTGCAATTTGCCTTAGCAAATTTGAACAAGGAGAGAAGTGCCGCAAAATGAGTAAGTGCGACCACGTGTTTCACCGGGACTGTATTGACCGGTGGCTGAAGGCGGAGCGCCACTGCCCGCTTTGCCGGACCAGTATTTGCATCGTCGTTCACGGTGGAGACAACATCGTCCCTCCAGCCGTCCCAAATGCTTGA

Protein sequence

MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA

Homology

[Close]

BLAST of Moc03g04760 vs. NCBI nr
Match: XP_022158251.1 (RING-H2 finger protein ATL1-like [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.3e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS 60
           MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS
Sbjct: 1   MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS 60

Query: 61  NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC 120
           NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC
Sbjct: 61  NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC 120

Query: 121 IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA 157
           IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
Sbjct: 121 IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA 156

[Close]

BLAST of Moc03g04760 vs. NCBI nr
Match: XP_022158250.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 68/142 (47.89%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 11  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EA 70
           P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  + 
Sbjct: 8   PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDR 67

Query: 71  LPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAE 130
             +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRKMS+C H+FHR+CIDRWL+ E
Sbjct: 68  EQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVE 127

Query: 131 RHCPLCRTSICIVVHGGDNIVP 151
           RHCPLCR  +CIVVH  + +VP
Sbjct: 128 RHCPLCRGCVCIVVHDANTVVP 148

[Close]

BLAST of Moc03g04760 vs. NCBI nr
Match: XP_011659772.1 (RING-H2 finger protein ATL39 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-31
Identity = 77/140 (55.00%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 9   LSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEA 68
           LSP P+P     HSL   LP  +  L  V M LL++L+ FIL L   RS  S+G ELPE 
Sbjct: 3   LSPSPIP---SLHSLI-LLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPE- 62

Query: 69  LPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAE 128
                L IEAPIF Y G   D++ECAICL + E+GEKCRKM  C HVFH+DCIDRW K +
Sbjct: 63  ----NLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVD 122

Query: 129 RHCPLCRTSICIVV--HGGD 147
            HCP+CRTS+C+VV  HGG+
Sbjct: 123 GHCPICRTSVCVVVVDHGGN 133

[Close]

BLAST of Moc03g04760 vs. NCBI nr
Match: XP_008457567.1 (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo] >TYJ97405.1 RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 9.8e-29
Identity = 72/151 (47.68%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 1   MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSC 60
           MSSP   P +L  PP PL  +   +   LP+ ++ L +++MFLL++L + I  L     C
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIV--LPRSIEDLLMLSMFLLLVLILVIAIL-----C 60

Query: 61  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHR 120
           G    +  E    K L I+APIF YG  GDD++ECAICL + E+GEKCRKM  C H FH+
Sbjct: 61  GKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHK 120

Query: 121 DCIDRWLKAERHCPLCRTSICIVVHGGDNIV 150
           DCIDRW   E HCPLCRTS C+VV   +N++
Sbjct: 121 DCIDRWFTVELHCPLCRTSGCVVVDRSENVM 144

[Close]

BLAST of Moc03g04760 vs. NCBI nr
Match: KAA0067739.1 (RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 9.8e-29
Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 1   MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSC 60
           MSSP   PS+L  PP PL  +  S+   LP+ ++ L +++M LL     F+L L++   C
Sbjct: 1   MSSPILLPSLLPLPPSPLPPLHSSIV--LPRSIEDLLMLSMVLL-----FVLLLVIAILC 60

Query: 61  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHR 120
           G    +  E    K L I+A +F YG  GDD++ECAICL + E+GEKCRKM  C H FH+
Sbjct: 61  GRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHK 120

Query: 121 DCIDRWLKAERHCPLCRTSICIVVHGGDN 148
           DCIDRW   E HCPLCRTS+C+VV   +N
Sbjct: 121 DCIDRWFTVELHCPLCRTSVCVVVDRSEN 142

[Close]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot
Match: Q9P7E1 (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.4e-15
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 62  GGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCI 121
           G E P    QK L+    +F + G+   DE C +CLS FE  ++CR++ +C+H FHR+CI
Sbjct: 497 GIEKPPVASQKDLEKAGGVFPFSGT---DERCLVCLSNFELNDECRRLKQCNHFFHRECI 556

Query: 122 DRWL-KAERHCPLCRT 137
           D+WL  ++  CPLCRT
Sbjct: 557 DQWLTSSQNSCPLCRT 569

[Close]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 87  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGD 146
           G  + ECAICL++FE  E  R + KCDHVFH  CID WL+A   CP+CR ++   V  G+
Sbjct: 122 GKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGE 181

Query: 147 NIVP 151
           ++ P
Sbjct: 182 SVEP 185

[Close]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 88  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI 139
           ++++EC ICL  FE+GEK + +  C H +H +C+DRWLK E  CPLCR SI
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152

[Close]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 4   PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-------- 63
           PP +  + P  P  + S + F  L   V I  +   FLLV  Y+F+++  L+        
Sbjct: 21  PPSTTFTSPIFPRTSSSGTNFPILAIAV-IGILATAFLLVSYYIFVIKCCLNWHQIDIFR 80

Query: 64  ---RSCGSN------GGELPEALPQKRLQIEAPIFAYGG----SGDDD-----EECAICL 123
              RS   N        E+   L +  ++   P+F +      +G++D     +EC++CL
Sbjct: 81  RRRRSSDQNPLMIYSPHEVNRGLDESAIR-AIPVFKFKKRDVVAGEEDQSKNSQECSVCL 140

Query: 124 SKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP 155
           ++F++ EK R +  C HVFH DCID WL+   +CPLCRTS+ C      D I  P+ P
Sbjct: 141 NEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSP 196

[Close]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 59  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDE------ECAICLSKFEQGEKCRKMSKC 118
           G+ GG  PE L    + + +   A   + +++E      ECA+CL++ E GE+ R + +C
Sbjct: 94  GTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRC 153

Query: 119 DHVFHRDCIDRWLKAERHCPLCRTSICI 141
            H FH +C+D WL +   CPLCR ++ +
Sbjct: 154 GHGFHAECVDMWLGSHSTCPLCRLTVVV 181

[Close]

BLAST of Moc03g04760 vs. ExPASy TrEMBL
Match: A0A6J1E0E9 (RING-H2 finger protein ATL1-like OS=Momordica charantia OX=3673 GN=LOC111024786 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS 60
           MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS
Sbjct: 1   MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGS 60

Query: 61  NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC 120
           NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC
Sbjct: 61  NGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDC 120

Query: 121 IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA 157
           IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
Sbjct: 121 IDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA 156

[Close]

BLAST of Moc03g04760 vs. ExPASy TrEMBL
Match: A0A0A0K790 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 1   MSSPP--PSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSC 60
           MSSP   PS++   P P+ ++ HSL   LP  +  L  V M LL++L+ FIL L   RS 
Sbjct: 1   MSSPNILPSLMPLSPSPIPSL-HSLI-LLPGFIMDLLTVPMLLLIVLFSFILILCRKRSA 60

Query: 61  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHR 120
            S+G ELPE      L IEAPIF Y G   D++ECAICL + E+GEKCRKM  C HVFH+
Sbjct: 61  KSDGEELPE-----NLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHK 120

Query: 121 DCIDRWLKAERHCPLCRTSICIVV--HGGD 147
           DCIDRW K + HCP+CRTS+C+VV  HGG+
Sbjct: 121 DCIDRWFKVDGHCPICRTSVCVVVVDHGGN 143

[Close]

BLAST of Moc03g04760 vs. ExPASy TrEMBL
Match: A0A6J1DVB5 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111024784 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 68/142 (47.89%), Postives = 98/142 (69.01%), Query Frame = 0


Query: 11  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EA 70
           P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  + 
Sbjct: 8   PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDR 67

Query: 71  LPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAE 130
             +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRKMS+C H+FHR+CIDRWL+ E
Sbjct: 68  EQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVE 127

Query: 131 RHCPLCRTSICIVVHGGDNIVP 151
           RHCPLCR  +CIVVH  + +VP
Sbjct: 128 RHCPLCRGCVCIVVHDANTVVP 148

[Close]

BLAST of Moc03g04760 vs. ExPASy TrEMBL
Match: A0A5D3BG26 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002250 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.8e-29
Identity = 72/151 (47.68%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 1   MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSC 60
           MSSP   P +L  PP PL  +   +   LP+ ++ L +++MFLL++L + I  L     C
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIV--LPRSIEDLLMLSMFLLLVLILVIAIL-----C 60

Query: 61  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHR 120
           G    +  E    K L I+APIF YG  GDD++ECAICL + E+GEKCRKM  C H FH+
Sbjct: 61  GKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHK 120

Query: 121 DCIDRWLKAERHCPLCRTSICIVVHGGDNIV 150
           DCIDRW   E HCPLCRTS C+VV   +N++
Sbjct: 121 DCIDRWFTVELHCPLCRTSGCVVVDRSENVM 144

[Close]

BLAST of Moc03g04760 vs. ExPASy TrEMBL
Match: A0A5A7VRG5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00590 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.8e-29
Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 1   MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSC 60
           MSSP   PS+L  PP PL  +  S+   LP+ ++ L +++M LL     F+L L++   C
Sbjct: 1   MSSPILLPSLLPLPPSPLPPLHSSIV--LPRSIEDLLMLSMVLL-----FVLLLVIAILC 60

Query: 61  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHR 120
           G    +  E    K L I+A +F YG  GDD++ECAICL + E+GEKCRKM  C H FH+
Sbjct: 61  GRRFAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHK 120

Query: 121 DCIDRWLKAERHCPLCRTSICIVVHGGDN 148
           DCIDRW   E HCPLCRTS+C+VV   +N
Sbjct: 121 DCIDRWFTVELHCPLCRTSVCVVVDRSEN 142

[Close]

BLAST of Moc03g04760 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 87  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGD 146
           G  + ECAICL++FE  E  R + KCDHVFH  CID WL+A   CP+CR ++   V  G+
Sbjct: 122 GKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGE 181

Query: 147 NIVP 151
           ++ P
Sbjct: 182 SVEP 185

[Close]

BLAST of Moc03g04760 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 88  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI 139
           ++++EC ICL  FE+GEK + +  C H +H +C+DRWLK E  CPLCR SI
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152

[Close]

BLAST of Moc03g04760 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 4   PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-------- 63
           PP +  + P  P  + S + F  L   V I  +   FLLV  Y+F+++  L+        
Sbjct: 21  PPSTTFTSPIFPRTSSSGTNFPILAIAV-IGILATAFLLVSYYIFVIKCCLNWHQIDIFR 80

Query: 64  ---RSCGSN------GGELPEALPQKRLQIEAPIFAYGG----SGDDD-----EECAICL 123
              RS   N        E+   L +  ++   P+F +      +G++D     +EC++CL
Sbjct: 81  RRRRSSDQNPLMIYSPHEVNRGLDESAIR-AIPVFKFKKRDVVAGEEDQSKNSQECSVCL 140

Query: 124 SKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP 155
           ++F++ EK R +  C HVFH DCID WL+   +CPLCRTS+ C      D I  P+ P
Sbjct: 141 NEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSP 196

[Close]

BLAST of Moc03g04760 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 67  EALPQKRLQIEAPIFAYGGSG----DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCID 126
           +AL Q  L  + PIF Y        ++ EEC++CLS+FE+ ++ R + KC H FH DCID
Sbjct: 79  QALDQAVLD-KIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 138

Query: 127 RWLKAERHCPLCRTSI 139
            W ++   CPLCR  +
Sbjct: 139 TWFRSRSTCPLCRAPV 153

[Close]

BLAST of Moc03g04760 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 72.0 bits (175), Expect = 4.7e-13
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 79  PIFAYGGSGDDD--EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRT 138
           PIF Y     +   EEC++CLS+FE+ ++ R + KC HVFH DCID W ++   CPLCR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

The following BLAST results are available for this feature:

BLAST of Moc03g04760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158251.1	3.3e-85	100.00	RING-H2 finger protein ATL1-like [Momordica charantia]	[more]
XP_022158250.1	2.8e-31	47.89	E3 ubiquitin-protein ligase RING1-like [Momordica charantia]	[more]
XP_011659772.1	3.6e-31	55.00	RING-H2 finger protein ATL39 [Cucumis sativus]	[more]
XP_008457567.1	9.8e-29	47.68	PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo] >TYJ97405.1 RING-H2 ...	[more]
KAA0067739.1	9.8e-29	47.65	RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa]	[more]

BLAST of Moc03g04760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9P7E1	8.4e-15	44.74	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
Q8RXX9	1.7e-12	48.44	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9SRM0	2.3e-12	52.94	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
P93823	5.1e-12	31.46	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LRB7	5.1e-12	34.09	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]

BLAST of Moc03g04760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0E9	1.6e-85	100.00	RING-H2 finger protein ATL1-like OS=Momordica charantia OX=3673 GN=LOC111024786 ...	[more]
A0A0A0K790	1.3e-31	53.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 P...	[more]
A0A6J1DVB5	1.3e-31	47.89	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102478...	[more]
A0A5D3BG26	4.8e-29	47.68	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7VRG5	4.8e-29	47.65	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Moc03g04760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	1.2e-13	48.44	RING/U-box superfamily protein	[more]
AT3G11110.1	1.6e-13	52.94	RING/U-box superfamily protein	[more]
AT1G04360.1	3.6e-13	31.46	RING/U-box superfamily protein	[more]
AT2G47560.1	3.6e-13	42.11	RING/U-box superfamily protein	[more]
AT3G62690.1	4.7e-13	46.77	AtL5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 93..134 e-value: 1.1E-5 score: 34.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 92..135 e-value: 2.8E-14 score: 53.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 93..135 score: 12.99088
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 68..140 e-value: 1.8E-20 score: 73.9
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 32..136
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 32..136
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 88..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g04760.1	Moc03g04760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane