Moc02g09270 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAGTAATATTACCACTCTCAAGTGCCTTGTTCCTTTGGTTCATCTCATTCTCTCTTCTGCATGAAGTTTCTGAAGTTAGTTTAGTAGGCTCTTGAATTTTAAAATGTATCTAATAGATCCCTAACTTATTAGACACGTTTACAGTTTAAAGACCTATTAGATACTTTTTAACATTCAAGGACCTATCACATATACTGTAAAAGTTCAGGCAACAAACTTTTAATCATTTTTAAACCGGGATTTTCTGCCTACCTGTTTTGCATTAAAAAGAATTTATACTAACAAAACTTGCTTGTACTTTGATATGATTCATCGAAAAGAGATGAAAATCGAACTGCAAATTACATGTAATTTTTAAGAAATGGGGCATGAAATTCAGTACTCATTCAGTTTCTCAAGAGATCTTATCTTACTATGGATGCGTCATTGAGCAGATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACDVPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS Homology
BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022146098.1 (DDB1- and CUL4-associated factor 8 [Momordica charantia] >XP_022146099.1 DDB1- and CUL4-associated factor 8 [Momordica charantia]) HSP 1 Score: 313.5 bits (802), Expect = 9.8e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022986111.1 (DDB1- and CUL4-associated factor 8 [Cucurbita maxima]) HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68 Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Moc02g09270 vs. NCBI nr
Match: XP_038902691.1 (DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 6.1e-68 Identity = 128/152 (84.21%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of Moc02g09270 vs. NCBI nr
Match: KAG6570754.1 (DDB1- and CUL4-associated factor 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 267.3 bits (682), Expect = 8.0e-68 Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022944589.1 (DDB1- and CUL4-associated factor 8 [Cucurbita moschata]) HSP 1 Score: 267.3 bits (682), Expect = 8.0e-68 Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q8N7N5 (DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.1e-19 Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5TAQ9 (DDB1- and CUL4-associated factor 8 OS=Homo sapiens OX=9606 GN=DCAF8 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5R448 (DDB1- and CUL4-associated factor 8 OS=Pongo abelii OX=9601 GN=DCAF8 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5U2M6 (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q6NRH1 (DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1CXN7 (DDB1- and CUL4-associated factor 8 OS=Momordica charantia OX=3673 GN=LOC111015394 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 4.7e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1JA63 (DDB1- and CUL4-associated factor 8 OS=Cucurbita maxima OX=3661 GN=LOC111483952 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68 Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1FWZ1 (DDB1- and CUL4-associated factor 8 OS=Cucurbita moschata OX=3662 GN=LOC111449002 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68 Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A1S3CLR9 (DDB1- and CUL4-associated factor 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501905 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65 Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A5A7T1Q2 (DDB1-and CUL4-associated factor 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00830 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65 Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of Moc02g09270 vs. TAIR 10
Match: AT3G45620.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 7.0e-46 Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0
BLAST of Moc02g09270 vs. TAIR 10
Match: AT3G45620.2 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 7.0e-46 Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0
BLAST of Moc02g09270 vs. TAIR 10
Match: AT4G35140.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 5.6e-19 Identity = 49/141 (34.75%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of Moc02g09270 vs. TAIR 10
Match: AT4G38480.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Moc02g09270 vs. TAIR 10
Match: AT5G10940.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12 Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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