Moc02g09270 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g09270
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DDB1- and CUL4-associated factor 8
Location	chr2: 6574739 .. 6575629 (-)
RNA-Seq Expression	Moc02g09270
Synteny	Moc02g09270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAGTAATATTACCACTCTCAAGTGCCTTGTTCCTTTGGTTCATCTCATTCTCTCTTCTGCATGAAGTTTCTGAAGTTAGTTTAGTAGGCTCTTGAATTTTAAAATGTATCTAATAGATCCCTAACTTATTAGACACGTTTACAGTTTAAAGACCTATTAGATACTTTTTAACATTCAAGGACCTATCACATATACTGTAAAAGTTCAGGCAACAAACTTTTAATCATTTTTAAACCGGGATTTTCTGCCTACCTGTTTTGCATTAAAAAGAATTTATACTAACAAAACTTGCTTGTACTTTGATATGATTCATCGAAAAGAGATGAAAATCGAACTGCAAATTACATGTAATTTTTAAGAAATGGGGCATGAAATTCAGTACTCATTCAGTTTCTCAAGAGATCTTATCTTACTATGGATGCGTCATTGAGCAGATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG

mRNA sequence

ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG

Coding sequence (CDS)

ATGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGAGGCCGTAATCGTTAAGTCAATGGTCGGTGATCGTAACGTTGTAAATCATATCGAGCCCCATCCACATCTGCCTATTCTTGCTACTTGTGGCATTGAAAATGATGTAAAGATCTGGACTCCCATCGCTTGTGATGTTCCTCCGTTGCCTGATGACATAGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCTCTGGTGACCCTTACTCCTGATGTTATCATGCACGTCCTACGCCTCCAAAGAAGACAGGCATCTGCATTTACAGAGAGAAGACGCACCACAGCTGATATCGACAGCGATGAAGAAAACGAGTGGGAAGCATATAATCTGGAAGTCGTAAATGGTAATGCCTCTTCTGAAGAAGATCCCGCAGAAGTTTCTTCTGAGTGTAACATCAGCTAG

Protein sequence

MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACDVPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEENEWEAYNLEVVNGNASSEEDPAEVSSECNIS

Homology

[Close]

BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022146098.1 (DDB1- and CUL4-associated factor 8 [Momordica charantia] >XP_022146099.1 DDB1- and CUL4-associated factor 8 [Momordica charantia])

HSP 1 Score: 313.5 bits (802), Expect = 9.8e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD
Sbjct: 337 MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
Sbjct: 457 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 488

[Close]

BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022986111.1 (DDB1- and CUL4-associated factor 8 [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68
Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK MVGDRNVVNHIEPHPHLPILATCGIE +VKIWTP+ACD
Sbjct: 337 VSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEA NLE ++GN S EED  E SS+CNIS
Sbjct: 457 ENEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 488

[Close]

BLAST of Moc02g09270 vs. NCBI nr
Match: XP_038902691.1 (DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 6.1e-68
Identity = 128/152 (84.21%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK A +VK MVGDRNVVNHIEPHPHLPILATCGIEN+VKIWTP+  D
Sbjct: 337 VSGSDCGHIYIWKKKGAPLVKLMVGDRNVVNHIEPHPHLPILATCGIENNVKIWTPMVSD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIE IMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR + ADIDSDE
Sbjct: 397 VPPLPDDIEPIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWE+YNL+V++GN S EED  E +SECNIS
Sbjct: 457 ENEWESYNLQVLDGNVSFEEDSTEYASECNIS 488

[Close]

BLAST of Moc02g09270 vs. NCBI nr
Match: KAG6570754.1 (DDB1- and CUL4-associated factor 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 8.0e-68
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK MVGDRNVVNHIEPHPHLPILATCGIE +VKIWTP+ACD
Sbjct: 323 VSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACD 382

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE
Sbjct: 383 VPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDE 442

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           +NEWEA NLE ++GN S EED  E SS+CNIS
Sbjct: 443 DNEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 474

[Close]

BLAST of Moc02g09270 vs. NCBI nr
Match: XP_022944589.1 (DDB1- and CUL4-associated factor 8 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 8.0e-68
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK MVGDRNVVNHIEPHPHLPILATCGIE +VKIWTP+ACD
Sbjct: 337 VSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           +NEWEA NLE ++GN S EED  E SS+CNIS
Sbjct: 457 DNEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 488

[Close]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q8N7N5 (DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.1e-19
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDR-NVVNHIEPHPHLPILATCGIENDVKIWTPIAC 60
           +SGSDCGHI++W+K    I++ M GD+  VVN +EPHPHLP+LAT G+++DVKIW P A 
Sbjct: 445 VSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA- 504

Query: 61  DVPPLPDDIEQIMESNRQGREDHSL--VTLTPD----VIMHVLRLQRRQASAFTERRRTT 120
           +       ++++++ N++ R++ SL    L        +MH LR QRR    + E     
Sbjct: 505 EASTELTGLKEVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLR-QRRHHRRWREPGVGA 564

[Close]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5TAQ9 (DDB1- and CUL4-associated factor 8 OS=Homo sapiens OX=9606 GN=DCAF8 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDR-NVVNHIEPHPHLPILATCGIENDVKIWTPIAC 60
           +SGSDCGHI++W+K    I++ M GD+  VVN +EPHPHLP+LAT G+++DVKIW P A 
Sbjct: 451 VSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA- 510

Query: 61  DVPPLPDDIEQIMESNRQGREDHSL--VTLTPD----VIMHVLRLQRRQASAFTERRRTT 120
           +       ++ +++ N++ R++ SL    L        +MH LR QRR    + E     
Sbjct: 511 EASTELTGLKDVIKKNKRERDEDSLHQTDLFDSHMLWFLMHHLR-QRRHHRRWREPGVGA 570

[Close]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5R448 (DDB1- and CUL4-associated factor 8 OS=Pongo abelii OX=9601 GN=DCAF8 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDR-NVVNHIEPHPHLPILATCGIENDVKIWTPIAC 60
           +SGSDCGHI++W+K    I++ M GD+  VVN +EPHPHLP+LAT G+++DVKIW P A 
Sbjct: 451 VSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA- 510

Query: 61  DVPPLPDDIEQIMESNRQGREDHSL--VTLTPD----VIMHVLRLQRRQASAFTERRRTT 120
           +       ++ +++ N++ R++ SL    L        +MH LR QRR    + E     
Sbjct: 511 EASTELTGLKDVIKKNKRERDEDSLHRTDLFDSHMLWFLMHHLR-QRRHHRRWREPGVGA 570

[Close]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q5U2M6 (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDR-NVVNHIEPHPHLPILATCGIENDVKIWTPIAC 60
           +SGSDCGHI++W+K    I++ M GD+  VVN +EPHPHLP+LAT G+++DVKIW P A 
Sbjct: 445 VSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA- 504

Query: 61  DVPPLPDDIEQIMESNRQGREDHSL--VTLTPD----VIMHVLRLQRRQASAFTERRRTT 120
           +       ++ +++ N++ R++ SL    L        +MH LR QRR    + E     
Sbjct: 505 EASTELTGLKDVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLR-QRRHHRRWREPGVGA 564

[Close]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot
Match: Q6NRH1 (DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDR-NVVNHIEPHPHLPILATCGIENDVKIWTPIAC 60
           +SGSDCGHI++W+K    IV+ M GD+  VVN +EPHPHLP+LAT G++ DVKIW P A 
Sbjct: 454 VSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAK 513

Query: 61  DVPPLPDDIEQIMESNRQGREDHSL--VTLTPD----VIMHVLRLQRRQASAFTERRRTT 120
           + P   D ++++++ N++ R++ SL    L  +     +MH LR QR Q     +     
Sbjct: 514 E-PTELDGLKEVIKKNKRERDEDSLHHTDLFDNHMLWFLMHHLR-QRGQRRRRRDAGLGA 573

[Close]

BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1CXN7 (DDB1- and CUL4-associated factor 8 OS=Momordica charantia OX=3673 GN=LOC111015394 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.7e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD
Sbjct: 337 MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS
Sbjct: 457 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 488

[Close]

BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1JA63 (DDB1- and CUL4-associated factor 8 OS=Cucurbita maxima OX=3661 GN=LOC111483952 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK MVGDRNVVNHIEPHPHLPILATCGIE +VKIWTP+ACD
Sbjct: 337 VSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEA NLE ++GN S EED  E SS+CNIS
Sbjct: 457 ENEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 488

[Close]

BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A6J1FWZ1 (DDB1- and CUL4-associated factor 8 OS=Cucurbita moschata OX=3662 GN=LOC111449002 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK MVGDRNVVNHIEPHPHLPILATCGIE +VKIWTP+ACD
Sbjct: 337 VSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACD 396

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDDIEQIMESNRQGREDHS VTLTPDVIMHVLRLQRRQASAFTERR +  DI SDE
Sbjct: 397 VPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDE 456

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           +NEWEA NLE ++GN S EED  E SS+CNIS
Sbjct: 457 DNEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 488

[Close]

BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A1S3CLR9 (DDB1- and CUL4-associated factor 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501905 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK M GD +VVNHIEPHPHLPILATCGIEN++KIWTP+A D
Sbjct: 329 VSGSDCGHIYIWKKKGAVLVKLMFGDHDVVNHIEPHPHLPILATCGIENNIKIWTPMASD 388

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDD+EQIMESN+QGREDHS VTLTPDVI+H LRLQRRQ S FTERR   ADI+SDE
Sbjct: 389 VPPLPDDMEQIMESNKQGREDHSRVTLTPDVIVHALRLQRRQTSVFTERRYNPADINSDE 448

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEAYNLEV++GN S EED  E +SECNIS
Sbjct: 449 ENEWEAYNLEVLDGNVSLEEDSTEHASECNIS 480

[Close]

BLAST of Moc02g09270 vs. ExPASy TrEMBL
Match: A0A5A7T1Q2 (DDB1-and CUL4-associated factor 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00830 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCGHIYIWKKK AV+VK M GD +VVNHIEPHPHLPILATCGIEN++KIWTP+A D
Sbjct: 372 VSGSDCGHIYIWKKKGAVLVKLMFGDHDVVNHIEPHPHLPILATCGIENNIKIWTPMASD 431

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
           VPPLPDD+EQIMESN+QGREDHS VTLTPDVI+H LRLQRRQ S FTERR   ADI+SDE
Sbjct: 432 VPPLPDDMEQIMESNKQGREDHSRVTLTPDVIVHALRLQRRQTSVFTERRYNPADINSDE 491

Query: 121 ENEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           ENEWEAYNLEV++GN S EED  E +SECNIS
Sbjct: 492 ENEWEAYNLEVLDGNVSLEEDSTEHASECNIS 523

[Close]

BLAST of Moc02g09270 vs. TAIR 10
Match: AT3G45620.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 7.0e-46
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 2   SGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACDV 61
           SGSDCGHI+IWKKK   +V++MVGDR VVN +E HPH+P+LA+CGIE  VK+WTP++ DV
Sbjct: 338 SGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVKLWTPMSNDV 397

Query: 62  PPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEE 121
             LP+ I+++ME NR GRED S VTLTPDVIMHVLRLQRRQ SAFTERR  + DI SDE 
Sbjct: 398 LSLPEKIDKVMELNRVGREDQSRVTLTPDVIMHVLRLQRRQTSAFTERRYVSTDIGSDEG 457

Query: 122 NEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           N+       V N + SS+        EC +S
Sbjct: 458 NDARFIASLVANDDESSDR-------ECTVS 481

[Close]

BLAST of Moc02g09270 vs. TAIR 10
Match: AT3G45620.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 7.0e-46
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 2   SGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACDV 61
           SGSDCGHI+IWKKK   +V++MVGDR VVN +E HPH+P+LA+CGIE  VK+WTP++ DV
Sbjct: 372 SGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVKLWTPMSNDV 431

Query: 62  PPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDEE 121
             LP+ I+++ME NR GRED S VTLTPDVIMHVLRLQRRQ SAFTERR  + DI SDE 
Sbjct: 432 LSLPEKIDKVMELNRVGREDQSRVTLTPDVIMHVLRLQRRQTSAFTERRYVSTDIGSDEG 491

Query: 122 NEWEAYNLEVVNGNASSEEDPAEVSSECNIS 153
           N+       V N + SS+        EC +S
Sbjct: 492 NDARFIASLVANDDESSDR-------ECTVS 515

[Close]

BLAST of Moc02g09270 vs. TAIR 10
Match: AT4G35140.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-19
Identity = 49/141 (34.75%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCG I+IW+KK   +++ M  DR+VVN IEPHPH+P+LA+ GIE+D+K+WT  A +
Sbjct: 350 VSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDIKVWTSKAAE 409

Query: 61  VPPLPDDIEQIMESNRQGREDHSLVTLTPDVIMHVLRLQRRQASAFTERRRTTADIDSDE 120
              LP++IE      R  R     V+   +++  +  LQ R +S+      +++    + 
Sbjct: 410 RATLPENIEL---RKRTPRGWMYRVSSPHELLAQLFSLQNRSSSSPEREGESSSATGREL 469

Query: 121 ENEWEAYNLEVVNGNASSEED 142
            +    +N +  + NA+ ++D
Sbjct: 470 LDLILTFNDQSDDENATDDDD 487

[Close]

BLAST of Moc02g09270 vs. TAIR 10
Match: AT4G38480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1   MSGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACD 60
           +SGSDCG I+IW+KK+  ++++M  DR+VVN IE HPH+P++ + GI+ D+KIWTP   +
Sbjct: 326 VSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIWTPGGTE 385

Query: 61  VPPLPDDIEQ 71
            P  P + +Q
Sbjct: 386 KPLSPGNAKQ 395

[Close]

BLAST of Moc02g09270 vs. TAIR 10
Match: AT5G10940.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 2   SGSDCGHIYIWKKKEAVIVKSMVGDRNVVNHIEPHPHLPILATCGIENDVKIWTPIACDV 61
           SGSD G  +IW+K+   ++K +VGD +V+N I+ HP   ++AT GI+N +KIW+P A  V
Sbjct: 638 SGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTA-SV 697

Query: 62  P---------PLPDDIEQIMESNRQ 78
           P         P   ++ ++MESN+Q
Sbjct: 698 PSIVAGGSAGPATANVVEVMESNQQ 721

The following BLAST results are available for this feature:

BLAST of Moc02g09270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146098.1	9.8e-82	100.00	DDB1- and CUL4-associated factor 8 [Momordica charantia] >XP_022146099.1 DDB1- a...	[more]
XP_022986111.1	3.6e-68	84.87	DDB1- and CUL4-associated factor 8 [Cucurbita maxima]	[more]
XP_038902691.1	6.1e-68	84.21	DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida]	[more]
KAG6570754.1	8.0e-68	84.21	DDB1- and CUL4-associated factor 8, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022944589.1	8.0e-68	84.21	DDB1- and CUL4-associated factor 8 [Cucurbita moschata]	[more]

BLAST of Moc02g09270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N7N5	7.1e-19	41.73	DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1	[more]
Q5TAQ9	1.2e-18	41.73	DDB1- and CUL4-associated factor 8 OS=Homo sapiens OX=9606 GN=DCAF8 PE=1 SV=1	[more]
Q5R448	1.2e-18	41.73	DDB1- and CUL4-associated factor 8 OS=Pongo abelii OX=9601 GN=DCAF8 PE=2 SV=1	[more]
Q5U2M6	1.2e-18	41.73	DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 S...	[more]
Q6NRH1	2.1e-18	41.73	DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1	[more]

BLAST of Moc02g09270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXN7	4.7e-82	100.00	DDB1- and CUL4-associated factor 8 OS=Momordica charantia OX=3673 GN=LOC11101539...	[more]
A0A6J1JA63	1.7e-68	84.87	DDB1- and CUL4-associated factor 8 OS=Cucurbita maxima OX=3661 GN=LOC111483952 P...	[more]
A0A6J1FWZ1	3.9e-68	84.21	DDB1- and CUL4-associated factor 8 OS=Cucurbita moschata OX=3662 GN=LOC111449002...	[more]
A0A1S3CLR9	2.4e-65	80.26	DDB1- and CUL4-associated factor 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A5A7T1Q2	2.4e-65	80.26	DDB1-and CUL4-associated factor 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Moc02g09270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45620.1	7.0e-46	59.60	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G45620.2	7.0e-46	59.60	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G35140.1	5.6e-19	34.75	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G38480.1	1.1e-17	48.57	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G10940.1	1.0e-12	41.18	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..56 e-value: 2.3E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	PANTHER	PTHR15574:SF64	DDB1- AND CUL4-ASSOCIATED FACTOR 8-LIKE	coord: 1..152
IPR045151	DDB1- and CUL4-associated factor 8-like	PANTHER	PTHR15574	WD REPEAT DOMAIN-CONTAINING FAMILY	coord: 1..152
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g09270.1	Moc02g09270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding