Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGGTCAGATAGAACGCTTCAATAGTATGTTGGAGGAATACCTCCGCCACTTCATTGATGCTCGACAGCAAAATTGGATACAGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA
mRNA sequence
ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA
Coding sequence (CDS)
ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA
Protein sequence
MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHTTMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHPYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPPRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF
Homology
BLAST of Moc01g14830 vs. NCBI nr
Match:
TYK01597.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 360.1 bits (923), Expect = 1.5e-95
Identity = 176/281 (62.63%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 1 MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------ 60
MT+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1245 MTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTER 1304
Query: 61 ---------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDH 120
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DH
Sbjct: 1305 FNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDH 1364
Query: 121 PYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPE 180
P+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRP+
Sbjct: 1365 PFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPK 1424
Query: 181 QLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDP 240
Q+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLKS+H DT D
Sbjct: 1425 QVRFRGRKDQRLVRKYEGPVQVLKKVGNTSYRVVLPTWMKIYPVIHVSNLKSYHQDTEDL 1484
Query: 241 PRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1485 QRNIVTRPIIDLSQKEDKDVEEILAERVRRGRRPTRRIHEY 1525
BLAST of Moc01g14830 vs. NCBI nr
Match:
KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1263 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1322
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1323 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1382
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1383 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1442
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1443 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1502
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1503 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1542
BLAST of Moc01g14830 vs. NCBI nr
Match:
KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. NCBI nr
Match:
TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. NCBI nr
Match:
KAA0053339.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 69/245 (28.16%), Postives = 103/245 (42.04%), Query Frame = 0
Query: 5 LFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT---------- 64
L F I G P ++ SDRD R T + EL + LG +SS+ HP T
Sbjct: 1218 LLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQT 1277
Query: 65 -----------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHI-IDHPYA 124
L +F +N + T+GK+PFEI G L P I D
Sbjct: 1278 LNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVN 1337
Query: 125 GKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLR 184
+S A K + T + LE A M+ +++R+PL GD VL+
Sbjct: 1338 ARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH---RDAY 1397
Query: 185 FWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKS--HHPDTIDPP 220
F ++ + Y GP +++K+ +Y + L S K H +I+V LK + PD P
Sbjct: 1398 FKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKFVYRPDAY--P 1457
BLAST of Moc01g14830 vs. ExPASy Swiss-Prot
Match:
Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)
HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 65/229 (28.38%), Postives = 96/229 (41.92%), Query Frame = 0
Query: 5 LFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT---------- 64
L F I G P ++ SDRD R T + EL + LG +SS+ HP T
Sbjct: 1244 LLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQT 1303
Query: 65 -----------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHI-IDHPYA 124
L +F +N + T+GK+PFEI G L P I D
Sbjct: 1304 LNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVN 1363
Query: 125 GKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLR 184
+S A K + T + LE A M+ +++R+PL GD VL+
Sbjct: 1364 ARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH---RDAY 1423
Query: 185 FWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKS 206
F ++ + Y GP +++K+ +Y + L S K H +I+V LKS
Sbjct: 1424 FKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKS 1469
BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match:
A0A5D3BQE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001890 PE=4 SV=1)
HSP 1 Score: 360.1 bits (923), Expect = 7.3e-96
Identity = 176/281 (62.63%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 1 MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------ 60
MT+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1245 MTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTER 1304
Query: 61 ---------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDH 120
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DH
Sbjct: 1305 FNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDH 1364
Query: 121 PYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPE 180
P+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRP+
Sbjct: 1365 PFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPK 1424
Query: 181 QLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDP 240
Q+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLKS+H DT D
Sbjct: 1425 QVRFRGRKDQRLVRKYEGPVQVLKKVGNTSYRVVLPTWMKIYPVIHVSNLKSYHQDTEDL 1484
Query: 241 PRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1485 QRNIVTRPIIDLSQKEDKDVEEILAERVRRGRRPTRRIHEY 1525
BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match:
A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match:
A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match:
A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match:
A0A5D3B7E7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00360 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0
Query: 2 TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF LG++LNISSSYHP T
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326
Query: 62 --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
+LDVAQFCFN Q S++ G++PFEIV GR +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386
Query: 122 YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446
Query: 182 LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
+RF G KDQRLVRKY GPV +++KV TSYRV LP+WMKI+P+IHVSNLK +H DT D
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506
Query: 242 RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK01597.1 | 1.5e-95 | 62.63 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
KAA0067557.1 | 3.4e-95 | 62.50 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
KAA0037220.1 | 3.4e-95 | 62.50 | reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta... | [more] |
TYK28713.1 | 3.4e-95 | 62.50 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
KAA0053339.1 | 3.4e-95 | 62.50 | reverse transcriptase [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Q99315 | 1.6e-15 | 28.16 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Q7LHG5 | 1.6e-15 | 28.38 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BQE4 | 7.3e-96 | 62.63 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... | [more] |
A0A5D3C4R1 | 1.6e-95 | 62.50 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
A0A5A7UXR6 | 1.6e-95 | 62.50 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22... | [more] |
A0A5A7T0E2 | 1.6e-95 | 62.50 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20... | [more] |
A0A5D3B7E7 | 1.6e-95 | 62.50 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
Match Name | E-value | Identity | Description | |