Moc01g14830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g14830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr1: 9266292 .. 9267136 (-)
RNA-Seq Expression	Moc01g14830
Synteny	Moc01g14830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGGTCAGATAGAACGCTTCAATAGTATGTTGGAGGAATACCTCCGCCACTTCATTGATGCTCGACAGCAAAATTGGATACAGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA

mRNA sequence

ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA

Coding sequence (CDS)

ATGACATCACAGTTATTCTTCGAGAACATAGTGAAACTATGGGGTGTCCCCGAAAGCGTCATAAGTGATAGAGATGGAAGATTCACTGGAACCTTCTGGACGGAACTCTTCCGTCTACTTGGCTCCAACTTGAACATATCCTCAAGCTACCATCCGCATACGACGATGCTTGATGTAGCCCAATTTTGTTTCAACTGCCAGAAGAGCACAACCATAGGGAAGGCTCCGTTTGAAATAGTATGTGGGCGCTTACTTATGTTACCTCACATCATCGACCACCCTTACGCAGGAAAGAGCCCTCAAGCTTACAACTTCACCAAAGGATGGCAACAATCCACGGATGTTGCCCGAGCACACCTTGAGAAGGCGTCTAAGCACATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTGGAATTTCAAGCAGGAGATCAAGTGCTTATTAAATTACGCCCGGAACAGCTCCGATTCTGGGGTAACAAAGATCAACGCCTTGTGCGGAAATATGGAGGGCCAGTCAACATCATTCAAAAGGTCGAGAAGACGTCATACAGGGTCCAATTACCCTCATGGATGAAAATCCACCCAATGATTCATGTGAGCAACTTGAAATCCCATCACCCGGACACCATTGATCCCCCACGAAATGAAGTGATCCGACCAGCAGTCACCTTGAACAACAAGATGGAAAAAGAAGTTGAAGAAACCTTAGCTGAAAGAACTCGTCGAGTCAGACGACCGAGAAGGGACGTACAAGAATTCTAA

Protein sequence

MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHTTMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHPYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPPRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF

Homology

[Close]

BLAST of Moc01g14830 vs. NCBI nr
Match: TYK01597.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.5e-95
Identity = 176/281 (62.63%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1    MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------ 60
            MT+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T      
Sbjct: 1245 MTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTER 1304

Query: 61   ---------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDH 120
                                  +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DH
Sbjct: 1305 FNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDH 1364

Query: 121  PYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPE 180
            P+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRP+
Sbjct: 1365 PFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPK 1424

Query: 181  QLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDP 240
            Q+RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLKS+H DT D 
Sbjct: 1425 QVRFRGRKDQRLVRKYEGPVQVLKKVGNTSYRVVLPTWMKIYPVIHVSNLKSYHQDTEDL 1484

Query: 241  PRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
             RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1485 QRNIVTRPIIDLSQKEDKDVEEILAERVRRGRRPTRRIHEY 1525

[Close]

BLAST of Moc01g14830 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1263 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1322

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1323 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1382

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1383 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1442

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1443 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1502

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1503 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1542

[Close]

BLAST of Moc01g14830 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. NCBI nr
Match: TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. NCBI nr
Match: KAA0053339.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 69/245 (28.16%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 5    LFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT---------- 64
            L F  I    G P ++ SDRD R T   + EL + LG    +SS+ HP T          
Sbjct: 1218 LLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQT 1277

Query: 65   -----------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHI-IDHPYA 124
                               L   +F +N   + T+GK+PFEI  G L   P I  D    
Sbjct: 1278 LNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVN 1337

Query: 125  GKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLR 184
             +S  A    K  +  T   +  LE A   M+   +++R+PL    GD VL+        
Sbjct: 1338 ARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH---RDAY 1397

Query: 185  FWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKS--HHPDTIDPP 220
            F      ++ + Y GP  +++K+   +Y + L S  K H +I+V  LK   + PD    P
Sbjct: 1398 FKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKFVYRPDAY--P 1457

[Close]

BLAST of Moc01g14830 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 65/229 (28.38%), Postives = 96/229 (41.92%), Query Frame = 0


Query: 5    LFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT---------- 64
            L F  I    G P ++ SDRD R T   + EL + LG    +SS+ HP T          
Sbjct: 1244 LLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQT 1303

Query: 65   -----------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHI-IDHPYA 124
                               L   +F +N   + T+GK+PFEI  G L   P I  D    
Sbjct: 1304 LNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVN 1363

Query: 125  GKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQLR 184
             +S  A    K  +  T   +  LE A   M+   +++R+PL    GD VL+        
Sbjct: 1364 ARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH---RDAY 1423

Query: 185  FWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKS 206
            F      ++ + Y GP  +++K+   +Y + L S  K H +I+V  LKS
Sbjct: 1424 FKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKS 1469

[Close]

BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match: A0A5D3BQE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001890 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.3e-96
Identity = 176/281 (62.63%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1    MTSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------ 60
            MT+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T      
Sbjct: 1245 MTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTER 1304

Query: 61   ---------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDH 120
                                  +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DH
Sbjct: 1305 FNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDH 1364

Query: 121  PYAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPE 180
            P+AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRP+
Sbjct: 1365 PFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPK 1424

Query: 181  QLRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDP 240
            Q+RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLKS+H DT D 
Sbjct: 1425 QVRFRGRKDQRLVRKYEGPVQVLKKVGNTSYRVVLPTWMKIYPVIHVSNLKSYHQDTEDL 1484

Query: 241  PRNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
             RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1485 QRNIVTRPIIDLSQKEDKDVEEILAERVRRGRRPTRRIHEY 1525

[Close]

BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

[Close]

BLAST of Moc01g14830 vs. ExPASy TrEMBL
Match: A0A5D3B7E7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00360 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 175/280 (62.50%), Postives = 213/280 (76.07%), Query Frame = 0


Query: 2    TSQLFFENIVKLWGVPESVISDRDGRFTGTFWTELFRLLGSNLNISSSYHPHT------- 61
            T+QLFF+++VKLWGVP S++SDRDGRF G+FWTELF  LG++LNISSSYHP T       
Sbjct: 1267 TAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYHPQTDGQTERF 1326

Query: 62   --------------------TMLDVAQFCFNCQKSTTIGKAPFEIVCGRLLMLPHIIDHP 121
                                 +LDVAQFCFN Q S++ G++PFEIV GR  +LPH++DHP
Sbjct: 1327 NSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHP 1386

Query: 122  YAGKSPQAYNFTKGWQQSTDVARAHLEKASKHMKKWADKKRRPLEFQAGDQVLIKLRPEQ 181
            +AGK+PQA NFTK W+Q+ D+ARA+LEKASK MKKWADKKRRPLEF+AGDQVLIKLRPEQ
Sbjct: 1387 FAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQ 1446

Query: 182  LRFWGNKDQRLVRKYGGPVNIIQKVEKTSYRVQLPSWMKIHPMIHVSNLKSHHPDTIDPP 241
            +RF G KDQRLVRKY GPV +++KV  TSYRV LP+WMKI+P+IHVSNLK +H DT D  
Sbjct: 1447 VRFRGRKDQRLVRKYEGPVEVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQ 1506

Query: 242  RNEVIRPAVTLNNKMEKEVEETLAERTRRVRRPRRDVQEF 255
            RN V RP + L+ K +K+VEE LAER RR RRP R + E+
Sbjct: 1507 RNVVTRPTIDLSQKEDKDVEEILAERVRRGRRPARRIHEY 1546

The following BLAST results are available for this feature:

BLAST of Moc01g14830 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01597.1	1.5e-95	62.63	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	3.4e-95	62.50	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	3.4e-95	62.50	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
TYK28713.1	3.4e-95	62.50	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053339.1	3.4e-95	62.50	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc01g14830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.6e-15	28.16	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.6e-15	28.38	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Moc01g14830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQE4	7.3e-96	62.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5D3C4R1	1.6e-95	62.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	1.6e-95	62.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7T0E2	1.6e-95	62.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5D3B7E7	1.6e-95	62.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Moc01g14830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..113 e-value: 8.7E-11 score: 43.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..254
None	No IPR available	PANTHER	PTHR24559:SF367	SUBFAMILY NOT NAMED	coord: 12..209
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 12..209
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g14830.1	Moc01g14830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity