MS028645 (gene) Bitter gourd (TR) v1

Overview
NameMS028645
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold101: 893849 .. 895835 (-)
RNA-Seq ExpressionMS028645
SyntenyMS028645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTCAAGAAACCAGCGGCTGAGGAAGACAAGGACAAGAAAGAGGAAGAAACAGAAATGGTAGATAGGTTGGGATTGATCGGTCGAAGATTGCGATTTGAAGGAGAGAAGAGAAATGTATTTTTATAAAAGAAAAATCTTTAAAAAAGAATATGGAATTCAATAAATAATTTTTGGTTAAAAGCCATATTTGATCCCTACCGATTTGCACAAATACCTCGGCGATTCCCGCATCCTGTTGTCCGGTCAAAAAGAAGAAGGGAAACGAAAGTTTTTTTTAATGATTTTTTATCCTTCTTTACCACCCGGTGCCGCGCTTGGGATGATTTTAGGCGCGGCCTTGCCTCCTAGATCCACTGGTCTATCGCTTGTAAAGCATCCCAGGTAGTACTCAATCAGATAGATTTTAGTCCCTAAATTTTAGTTTGTAACGATTTAATCCATATACTCTCATTAAAGTAATGATTTTTAGTCGCTTTGTAACGATTTAGTCCCCGTAGTTTAAATTTTGTAACAATTTATTCCTTATAGTGAAAAGTCTTATAAAAATTAAGTGTCAAGTTTTATCATATATCAATTTAATCTTTCTAATTTATAAATATATTTGGTCACTCATTGGTTTATCAATCTATATATATAAGAAATTTAATAAATAAAAAAAAACCACGATGCGGACTAAATCGTTGTAAACTTTAAAATACAAGGACTAAATGATTACATGTTAAAGTTTGAGGACTAAATTGTTATCAATTTGAAAGTAAAGAGACTAAATCGTTACAAATTAAAGTTTAGGGACTAGATCGTTACTTTAACAGAAGTATACGGGGACTAAAAGTATTTTTTAACCATAATTTTTAATCTTAAATATGCGGACCCGACCTTAAAAATTATTTATTTAAAAAAAAAAACCTGAACACAGTTGTTAATATATATTTTAAATTTATGTTATGGTATGAAATTTCTCAAATTACTTTTTTTATCCAAAATCTGAAATTTAAGAAAAAGCAAAAAGAAGAAAATTTTTTGTATTCAATATTTGAAAAATATTTATTTTAAGCAACTGGTTCCATGTATCAGTCGGGTTCCATGTATTCTCAAAATCGTAGTTTTGGAATGGTATTGAGGCCTCTTGAGCCTCCTCAATTGACCACTACTATATCTACTATCTGACCGCCTTTACCCATTGAAAAATTCATTATGGTGCCTCCTCCTTGTAGTGCTCATAGTAATCATCATCTTCCCTTAGAAACTTTAGTTCAAAAGAAAGTCGATGTGAGTGCTGAAATAAAGGAGGAGAGCTCTCGAACACAGTTGGAAATGTATATTTTGATTATTTGAGGCACCGGCAGGAGTGACGATAGGGGGAACATAAAGAGGAAAGTTCATGTGTACGTAGCATGAAAATTGATGAGAGTTTGAACACAGAGATTGAGGCAAGGCCTCTGATGCCTCCCTCTGTGACAATAGGAGAAAATTCGAGAAACGGGTCGGTTCAGTAGATCTATCTAGTGCAACAGGAAAGAAAAGTAGAGAGGATGATTTTCGGAGGATGACATCTGAGGAATGGAAAGTGATGTTTGAAGATGCTAGGAGGATTGTCAATCAAATTACTTGAAGAGCTTGTTATATGCAGCCACCTCTGCAATCACCAGTAAGATCTCGAACAGTAAGTCTCCAAGAAGAGGAGATAGAAATAGAACGGCAGTTACCTCTTGAGATTTCAATGGAAGCGTTATCTAAGAGTTTAGAGGATGAGGTAACTAGACCTACGCCAAAGGATGGAGATTATGCAACTCCGCAAGCCACCTTACCTGGAATTGGAGCACCACTAGAAATTTATGGAGATTGGGAAATTGAGTCTTATTCTGCCATGCCGGCTTCGAATGATCTAAATGCTCCTTCAATAAATTCCATTCAAAGAGAGCATTCAACAGGGTCCCCTCGTTCTGAGAGAGAAAGGAATCCACACAAAGGGGATATGTAG

mRNA sequence

ATGAAAGTCAAGAAACCAGCGGCTGAGGAAGACAAGGACAAGAAAGAGGAAGAAACAGAAATGCCACCTCTGCAATCACCAGTAAGATCTCGAACAGTAAGTCTCCAAGAAGAGGAGATAGAAATAGAACGGCAGTTACCTCTTGAGATTTCAATGGAAGCGTTATCTAAGAGTTTAGAGGATGAGGTAACTAGACCTACGCCAAAGGATGGAGATTATGCAACTCCGCAAGCCACCTTACCTGGAATTGGAGCACCACTAGAAATTTATGGAGATTGGGAAATTGAGTCTTATTCTGCCATGCCGGCTTCGAATGATCTAAATGCTCCTTCAATAAATTCCATTCAAAGAGAGCATTCAACAGGGTCCCCTCGTTCTGAGAGAGAAAGGAATCCACACAAAGGGGATATGTAG

Coding sequence (CDS)

ATGAAAGTCAAGAAACCAGCGGCTGAGGAAGACAAGGACAAGAAAGAGGAAGAAACAGAAATGCCACCTCTGCAATCACCAGTAAGATCTCGAACAGTAAGTCTCCAAGAAGAGGAGATAGAAATAGAACGGCAGTTACCTCTTGAGATTTCAATGGAAGCGTTATCTAAGAGTTTAGAGGATGAGGTAACTAGACCTACGCCAAAGGATGGAGATTATGCAACTCCGCAAGCCACCTTACCTGGAATTGGAGCACCACTAGAAATTTATGGAGATTGGGAAATTGAGTCTTATTCTGCCATGCCGGCTTCGAATGATCTAAATGCTCCTTCAATAAATTCCATTCAAAGAGAGCATTCAACAGGGTCCCCTCGTTCTGAGAGAGAAAGGAATCCACACAAAGGGGATATGTAG

Protein sequence

MKVKKPAAEEDKDKKEEETEMPPLQSPVRSRTVSLQEEEIEIERQLPLEISMEALSKSLEDEVTRPTPKDGDYATPQATLPGIGAPLEIYGDWEIESYSAMPASNDLNAPSINSIQREHSTGSPRSERERNPHKGDM
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS028645.1MS028645.1mRNA