MS026286 (gene) Bitter gourd (TR) v1

Overview


Name	MS026286
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WRKY domain-containing protein
Location	scaffold63: 3424928 .. 3425943 (+)
RNA-Seq Expression	MS026286
Synteny	MS026286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTGACAATATTTCACAGCTGCTGAGTGCACCCACCAATGGTGATATTGCACACACACAGCTTCTTCCTCTCAGCCAAAGCTGTGATGAAATTGACTGGGAAGGGCTGCTCTGTGGTTCGTCTTTGAGTTTGGAGATGGAGAAGGCAAGTGGAAGTGAGGGGATAAAAATGGGGGATTTTGATGGTGGAGCTGGAAGAAGAGATGAGGGTAATAATGGAGGGAAAAACAAAGGGAAAATGATGATGGGCAAAAGAAGTAGCAGTGCAGTAGTGCCTAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTACAGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACACATCCCAGGTACATGTATATGTTTTTGTTTTGTTTGTTGTCATTTTGTCTCAGTCTTCAGATTTGTGAAGAGAAAATGGAGTGCCCAAACACTAATATAAGTTGATGAAAGGGGGAAAAAAGAAATGAAAGTGGTTCAAAGATGCATGTTATTTGAGAATGTGGGCATCAATCCGCGAGCTTTTTTTTTATGTTGTTGAGTTCAACGTGAGAGTTGAACTACACTTAAATTGACAAGTAATAAATAATTATGTTGATTACTCAAATCATGCGTGTGTGTATAATTTCTTTCCTTATAAGTAAGTTGATGAAAGAAAAACACGAAAAGAAAGGTAAAATTTGTTATTGTGTCTACTAAATTGATGTATACTAATAACTTAATATGAGTTAACATGTTAAAAAAACTTGTTTAAATTCTCACTTTGGAAAGTGGGTTTCTTTTTCTTTTGTTTGATTTGTTTTAGGAGCTATTACCGGTGTACACATCATACATGCAACGTTAAGAAACAAATTCAAAGGCACTCAAAGGATCCAACCATTGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAAAAATTAATGGAGACTCTAAGCCCTCTCCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

mRNA sequence

ATGGATGGTGACAATATTTCACAGCTGCTGAGTGCACCCACCAATGGTGATATTGCACACACACAGCTTCTTCCTCTCAGCCAAAGCTGTGATGAAATTGACTGGGAAGGGCTGCTCTGTGGTTCGTCTTTGAGTTTGGAGATGGAGAAGGCAAGTGGAAGTGAGGGGATAAAAATGGGGGATTTTGATGGTGGAGCTGGAAGAAGAGATGAGGGTAATAATGGAGGGAAAAACAAAGGGAAAATGATGATGGGCAAAAGAAGTAGCAGTGCAGTAGTGCCTAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTACAGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACACATCCCAGGAGCTATTACCGGTGTACACATCATACATGCAACGTTAAGAAACAAATTCAAAGGCACTCAAAGGATCCAACCATTGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAAAAATTAATGGAGACTCTAAGCCCTCTCCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

Coding sequence (CDS)

ATGGATGGTGACAATATTTCACAGCTGCTGAGTGCACCCACCAATGGTGATATTGCACACACACAGCTTCTTCCTCTCAGCCAAAGCTGTGATGAAATTGACTGGGAAGGGCTGCTCTGTGGTTCGTCTTTGAGTTTGGAGATGGAGAAGGCAAGTGGAAGTGAGGGGATAAAAATGGGGGATTTTGATGGTGGAGCTGGAAGAAGAGATGAGGGTAATAATGGAGGGAAAAACAAAGGGAAAATGATGATGGGCAAAAGAAGTAGCAGTGCAGTAGTGCCTAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTACAGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACACATCCCAGGAGCTATTACCGGTGTACACATCATACATGCAACGTTAAGAAACAAATTCAAAGGCACTCAAAGGATCCAACCATTGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAAAAATTAATGGAGACTCTAAGCCCTCTCCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

Protein sequence

MDGDNISQLLSAPTNGDIAHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMGDFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

Homology

[Close]

BLAST of MS026286 vs. NCBI nr
Match: XP_022136661.1 (probable WRKY transcription factor 24 [Momordica charantia])

HSP 1 Score: 374.4 bits (960), Expect = 5.7e-100
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIAHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 60
           MDGDNISQLLSAPTNGDI HTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG
Sbjct: 3   MDGDNISQLLSAPTNGDITHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 62

Query: 61  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 120
           DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA
Sbjct: 63  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 122

Query: 121 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 180
           VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL
Sbjct: 123 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 182

Query: 181 QFLSGI 187
           QFLSGI
Sbjct: 183 QFLSGI 188

[Close]

BLAST of MS026286 vs. NCBI nr
Match: AZU90778.1 (WRKY transcription factor 3 [Siraitia grosvenorii] >QEE82237.1 WRKY transcription factor 3 [Siraitia grosvenorii])

HSP 1 Score: 241.9 bits (616), Expect = 4.4e-60
Identity = 141/204 (69.12%), Postives = 155/204 (75.98%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIA--------------HTQLLPLSQ----SCDEIDWEGLLCGS 60
           MDGD I QLL+APT  D+A              +   LPL++    + D+IDW GLL   
Sbjct: 3   MDGD-IPQLLTAPTIADMATSSSSSYPSSSSLINCTQLPLNENSDAAADDIDWVGLLSAG 62

Query: 61  SLSLEMEKASGSEGIKMGDFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRS 120
           SLSLEMEK  GSE + M D  GG     EG  GGKNKGK M+GKRS+   +PRIAFQTRS
Sbjct: 63  SLSLEMEKPCGSE-VAMADDVGGR----EG-YGGKNKGK-MVGKRSA---LPRIAFQTRS 122

Query: 121 AEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH 180
           AEDVLDDGYRWRKYGQKAVKHS++PRSYYRCTHHTCNVKKQIQRHSKDP IVVTTYEG+H
Sbjct: 123 AEDVLDDGYRWRKYGQKAVKHSSYPRSYYRCTHHTCNVKKQIQRHSKDPNIVVTTYEGVH 182

Query: 181 NHPSEKLMETLSPLLKQLQFLSGI 187
           NHPSEKLMETLSPLLKQLQFLSGI
Sbjct: 183 NHPSEKLMETLSPLLKQLQFLSGI 195

[Close]

BLAST of MS026286 vs. NCBI nr
Match: XP_023544319.1 (probable WRKY transcription factor 24 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-57
Identity = 126/165 (76.36%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 27  SQSCDEIDWEGLLCGSS-LSLEMEKASG-SEGIKMGDFDGGAGRRDEGN---NGGKNKGK 86
           S +  EIDW G+  GSS +SLEMEK SG SEG  M    G    ++E +   +GGKNKGK
Sbjct: 24  SDAAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMA--MGDCNYQNESHVHVHGGKNKGK 83

Query: 87  MMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 146
           M MGKR +   +PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK
Sbjct: 84  MAMGKRGA---IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 143

Query: 147 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 187
           KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Sbjct: 144 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 183

[Close]

BLAST of MS026286 vs. NCBI nr
Match: KAG7031188.1 (putative WRKY transcription factor 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 7.8e-57
Identity = 126/165 (76.36%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 27  SQSCDEIDWEGLLCGSS-LSLEMEKASG-SEGIKMGDFDGGAGRRDEGN---NGGKNKGK 86
           S    EIDW G+  GSS +SLEMEK SG SEG  M    G    ++E +   +GGKNKGK
Sbjct: 23  SSDAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMA--MGDCNYQNESHVHVHGGKNKGK 82

Query: 87  MMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 146
           M MGKR +   +PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK
Sbjct: 83  MAMGKRGA---IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 142

Query: 147 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 187
           KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Sbjct: 143 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 182

[Close]

BLAST of MS026286 vs. NCBI nr
Match: XP_038888280.1 (probable WRKY transcription factor 24 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 3.9e-56
Identity = 136/199 (68.34%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIAHTQLLPLSQSCDEIDWEGLLCGSSL-SLEMEKA-SGSEGIK 60
           MDGD I+         D  H     L  +C EIDW+GL   S L +LE+EK   GSE   
Sbjct: 1   MDGDIIN------NPQDNHHMGTSSLMNNC-EIDWDGLFSSSCLNNLELEKGICGSEDYP 60

Query: 61  MGDFDGGA--GRRDEGN-NGGKNK--------GKMMMGKRSSSAVVPRIAFQTRSAEDVL 120
           MGD+D  A  G   EGN  GGKN         GKM+M KR  + + PRIAFQTRSAEDVL
Sbjct: 61  MGDYDNVAVGGINLEGNIIGGKNNNSNNKYKGGKMVMSKR-RNVMAPRIAFQTRSAEDVL 120

Query: 121 DDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSE 180
           DDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSE
Sbjct: 121 DDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSE 180

Query: 181 KLMETLSPLLKQLQFLSGI 187
           KLMETLSPLLKQLQFLSGI
Sbjct: 181 KLMETLSPLLKQLQFLSGI 191

[Close]

BLAST of MS026286 vs. ExPASy Swiss-Prot
Match: Q9FFS3 (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-42
Identity = 82/106 (77.36%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 79  KGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTC 138
           KGK +  KRS    VPRIAF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTC
Sbjct: 71  KGKELKEKRSRK--VPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTC 130

Query: 139 NVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           NVKKQ+QR +KDP +VVTTYEG+HNHP EKLMETL+PLL+QLQFLS
Sbjct: 131 NVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLS 174

[Close]

BLAST of MS026286 vs. ExPASy Swiss-Prot
Match: Q8VWQ4 (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-42
Identity = 96/186 (51.61%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 4   DNISQLLSAPT---NGDIAHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 63
           D+ + ++ AP+   +GD+      P S SC          G  LS ++E   G  G   G
Sbjct: 26  DDKTLMMMAPSLIFSGDVG-----PSSSSCTP-------AGYHLSAQLENFRGGGGEMGG 85

Query: 64  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 123
                +   D   N  K KGK  +        + RIAF TRS +DVLDDGYRWRKYGQK+
Sbjct: 86  LVSNNSNNSDHNKNCNKGKGKRTL-------AMQRIAFHTRSDDDVLDDGYRWRKYGQKS 145

Query: 124 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 183
           VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP EKLMETLSPLL+QL
Sbjct: 146 VKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLSPLLRQL 192

Query: 184 QFLSGI 187
           QFLS +
Sbjct: 206 QFLSRV 192

[Close]

BLAST of MS026286 vs. ExPASy Swiss-Prot
Match: Q8GY11 (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-34
Identity = 67/91 (73.63%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 94  PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 153
           PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +I
Sbjct: 16  PRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSI 75

Query: 154 VVTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           V TTYEGIHNHP E+LM+TL+PLL QLQFLS
Sbjct: 76  VETTYEGIHNHPCEELMQTLTPLLHQLQFLS 106

[Close]

BLAST of MS026286 vs. ExPASy Swiss-Prot
Match: Q9FYA2 (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 95  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIV 154
           R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  CNVKKQ+QR + D  +V
Sbjct: 54  RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVV 113

Query: 155 VTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           VTTYEG+H+HP EK  E    +L Q+Q  S
Sbjct: 114 VTTYEGVHSHPIEKSTENFEHILTQMQIYS 143

[Close]

BLAST of MS026286 vs. ExPASy Swiss-Prot
Match: Q8VWJ2 (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24
Identity = 61/119 (51.26%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 51  ASGSEGIKMGDFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAV----VPRIAFQTRSAEDV 110
           +S SE    G+ D G  RR     G +++    +GK   + V     PR++F T+S  D 
Sbjct: 112 SSSSEADHPGE-DSGKSRRKRELVGEEDQISKKVGKTKKTEVKKQREPRVSFMTKSEVDH 171

Query: 111 LDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHP 166
           L+DGYRWRKYGQKAVK+S +PRSYYRCT   CNVKK+++R  +DPT+V+TTYEG HNHP
Sbjct: 172 LEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHP 229

[Close]

BLAST of MS026286 vs. ExPASy TrEMBL
Match: A0A6J1C449 (probable WRKY transcription factor 24 OS=Momordica charantia OX=3673 GN=LOC111008314 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.8e-100
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIAHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 60
           MDGDNISQLLSAPTNGDI HTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG
Sbjct: 3   MDGDNISQLLSAPTNGDITHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 62

Query: 61  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 120
           DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA
Sbjct: 63  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 122

Query: 121 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 180
           VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL
Sbjct: 123 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 182

Query: 181 QFLSGI 187
           QFLSGI
Sbjct: 183 QFLSGI 188

[Close]

BLAST of MS026286 vs. ExPASy TrEMBL
Match: A0A3Q9QZY9 (WRKY transcription factor 3 OS=Siraitia grosvenorii OX=190515 GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60
Identity = 141/204 (69.12%), Postives = 155/204 (75.98%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIA--------------HTQLLPLSQ----SCDEIDWEGLLCGS 60
           MDGD I QLL+APT  D+A              +   LPL++    + D+IDW GLL   
Sbjct: 3   MDGD-IPQLLTAPTIADMATSSSSSYPSSSSLINCTQLPLNENSDAAADDIDWVGLLSAG 62

Query: 61  SLSLEMEKASGSEGIKMGDFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRS 120
           SLSLEMEK  GSE + M D  GG     EG  GGKNKGK M+GKRS+   +PRIAFQTRS
Sbjct: 63  SLSLEMEKPCGSE-VAMADDVGGR----EG-YGGKNKGK-MVGKRSA---LPRIAFQTRS 122

Query: 121 AEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH 180
           AEDVLDDGYRWRKYGQKAVKHS++PRSYYRCTHHTCNVKKQIQRHSKDP IVVTTYEG+H
Sbjct: 123 AEDVLDDGYRWRKYGQKAVKHSSYPRSYYRCTHHTCNVKKQIQRHSKDPNIVVTTYEGVH 182

Query: 181 NHPSEKLMETLSPLLKQLQFLSGI 187
           NHPSEKLMETLSPLLKQLQFLSGI
Sbjct: 183 NHPSEKLMETLSPLLKQLQFLSGI 195

[Close]

BLAST of MS026286 vs. ExPASy TrEMBL
Match: A0A6J1FW26 (probable WRKY transcription factor 43 OS=Cucurbita moschata OX=3662 GN=LOC111447402 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.9e-56
Identity = 125/165 (75.76%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 27  SQSCDEIDWEGLLCGSS-LSLEMEKASG-SEGIKMGDFDGGAGRRDEGN---NGGKNKGK 86
           S    EIDW G+  GSS +SLEMEK SG SEG  M    G    ++E +   +GGKNKGK
Sbjct: 11  SSDAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMA--MGDCNYQNESHVHVHGGKNKGK 70

Query: 87  MMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 146
           M MGKR +   +PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHST+PRSYYRCTHHTCNVK
Sbjct: 71  MAMGKRGA---IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTYPRSYYRCTHHTCNVK 130

Query: 147 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 187
           KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Sbjct: 131 KQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 170

[Close]

BLAST of MS026286 vs. ExPASy TrEMBL
Match: A0A6J1J4I8 (probable WRKY transcription factor 43 OS=Cucurbita maxima OX=3661 GN=LOC111481692 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.1e-56
Identity = 123/159 (77.36%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 32  EIDWEGLLCG-SSLSLEMEKASG-SEG--IKMGDFDGGAGRRDEGNNGGKNKGKMMMGKR 91
           EIDW G+  G S +SLEMEK SG SEG  + MGD++          +GGKNKGKM M KR
Sbjct: 19  EIDWVGIFGGYSDVSLEMEKGSGVSEGATMAMGDYN-YQNDTHVHVHGGKNKGKMAMAKR 78

Query: 92  SSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH 151
            +   +PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH
Sbjct: 79  GA---IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH 138

Query: 152 SKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 187
           SKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Sbjct: 139 SKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 173

[Close]

BLAST of MS026286 vs. ExPASy TrEMBL
Match: A0A1S3BSW1 (probable WRKY transcription factor 43 OS=Cucumis melo OX=3656 GN=LOC103493140 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.9e-55
Identity = 129/213 (60.56%), Postives = 140/213 (65.73%), Query Frame = 0


Query: 1   MDGDNISQLLSAPTNGDIAHTQLLPLSQSCDEIDWEGLLCGSSLS---LEM-EKA-SGSE 60
           M  DNI+Q+           T    +  +C+ IDW+GL   S LS   LEM EK   GSE
Sbjct: 1   MGDDNINQM---------GTTSSSSMMNNCEIIDWDGLFSSSCLSNNNLEMVEKGICGSE 60

Query: 61  ----------------------GIKMGDFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVV 120
                                 G+K GD     G     NN  K KG+M+MGKR S+   
Sbjct: 61  DDNNYYPMGDSNYDNNNNVVIGGVKEGDIVISGGNNHNNNNNIKYKGRMVMGKRRSAMAS 120

Query: 121 PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 180
           PRIAFQTRS EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKKQIQRHSKDPTI
Sbjct: 121 PRIAFQTRSVEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTI 180

Query: 181 VVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 187
           VVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Sbjct: 181 VVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 204

[Close]

BLAST of MS026286 vs. TAIR 10
Match: AT5G41570.1 (WRKY DNA-binding protein 24 )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 82/106 (77.36%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 79  KGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTC 138
           KGK +  KRS    VPRIAF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTC
Sbjct: 71  KGKELKEKRSRK--VPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTC 130

Query: 139 NVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           NVKKQ+QR +KDP +VVTTYEG+HNHP EKLMETL+PLL+QLQFLS
Sbjct: 131 NVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLS 174

[Close]

BLAST of MS026286 vs. TAIR 10
Match: AT1G64000.1 (WRKY DNA-binding protein 56 )

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 96/186 (51.61%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 4   DNISQLLSAPT---NGDIAHTQLLPLSQSCDEIDWEGLLCGSSLSLEMEKASGSEGIKMG 63
           D+ + ++ AP+   +GD+      P S SC          G  LS ++E   G  G   G
Sbjct: 26  DDKTLMMMAPSLIFSGDVG-----PSSSSCTP-------AGYHLSAQLENFRGGGGEMGG 85

Query: 64  DFDGGAGRRDEGNNGGKNKGKMMMGKRSSSAVVPRIAFQTRSAEDVLDDGYRWRKYGQKA 123
                +   D   N  K KGK  +        + RIAF TRS +DVLDDGYRWRKYGQK+
Sbjct: 86  LVSNNSNNSDHNKNCNKGKGKRTL-------AMQRIAFHTRSDDDVLDDGYRWRKYGQKS 145

Query: 124 VKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQL 183
           VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP EKLMETLSPLL+QL
Sbjct: 146 VKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLSPLLRQL 192

Query: 184 QFLSGI 187
           QFLS +
Sbjct: 206 QFLSRV 192

[Close]

BLAST of MS026286 vs. TAIR 10
Match: AT2G46130.1 (WRKY DNA-binding protein 43 )

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 67/91 (73.63%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 94  PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 153
           PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +I
Sbjct: 16  PRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSI 75

Query: 154 VVTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           V TTYEGIHNHP E+LM+TL+PLL QLQFLS
Sbjct: 76  VETTYEGIHNHPCEELMQTLTPLLHQLQFLS 106

[Close]

BLAST of MS026286 vs. TAIR 10
Match: AT2G46130.2 (WRKY DNA-binding protein 43 )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 94  PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 153
           PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +P    RCT H CNVKKQ+QR SK+ +I
Sbjct: 4   PRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYP----RCTQHMCNVKKQVQRLSKETSI 63

Query: 154 VVTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           V TTYEGIHNHP E+LM+TL+PLL QLQFLS
Sbjct: 64  VETTYEGIHNHPCEELMQTLTPLLHQLQFLS 90

[Close]

BLAST of MS026286 vs. TAIR 10
Match: AT5G13080.1 (WRKY DNA-binding protein 75 )

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-29
Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 95  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIV 154
           R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  CNVKKQ+QR + D  +V
Sbjct: 54  RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVV 113

Query: 155 VTTYEGIHNHPSEKLMETLSPLLKQLQFLS 185
           VTTYEG+H+HP EK  E    +L Q+Q  S
Sbjct: 114 VTTYEGVHSHPIEKSTENFEHILTQMQIYS 143

The following BLAST results are available for this feature:

BLAST of MS026286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136661.1	5.7e-100	99.46	probable WRKY transcription factor 24 [Momordica charantia]	[more]
AZU90778.1	4.4e-60	69.12	WRKY transcription factor 3 [Siraitia grosvenorii] >QEE82237.1 WRKY transcriptio...	[more]
XP_023544319.1	6.0e-57	76.36	probable WRKY transcription factor 24 [Cucurbita pepo subsp. pepo]	[more]
KAG7031188.1	7.8e-57	76.36	putative WRKY transcription factor 24, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_038888280.1	3.9e-56	68.34	probable WRKY transcription factor 24 [Benincasa hispida]	[more]

BLAST of MS026286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFS3	1.9e-42	77.36	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 ...	[more]
Q8VWQ4	3.3e-42	51.61	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 ...	[more]
Q8GY11	1.5e-34	73.63	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ...	[more]
Q9FYA2	1.0e-27	64.44	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 ...	[more]
Q8VWJ2	3.1e-24	51.26	WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1	[more]

BLAST of MS026286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C449	2.8e-100	99.46	probable WRKY transcription factor 24 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A3Q9QZY9	2.1e-60	69.12	WRKY transcription factor 3 OS=Siraitia grosvenorii OX=190515 GN=WRKY3 PE=2 SV=1	[more]
A0A6J1FW26	1.9e-56	75.76	probable WRKY transcription factor 43 OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]
A0A6J1J4I8	7.1e-56	77.36	probable WRKY transcription factor 43 OS=Cucurbita maxima OX=3661 GN=LOC11148169...	[more]
A0A1S3BSW1	7.9e-55	60.56	probable WRKY transcription factor 43 OS=Cucumis melo OX=3656 GN=LOC103493140 PE...	[more]

BLAST of MS026286 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41570.1	1.4e-43	77.36	WRKY DNA-binding protein 24	[more]
AT1G64000.1	2.3e-43	51.61	WRKY DNA-binding protein 56	[more]
AT2G46130.1	1.1e-35	73.63	WRKY DNA-binding protein 43	[more]
AT2G46130.2	1.6e-31	69.23	WRKY DNA-binding protein 43	[more]
AT5G13080.1	7.3e-29	64.44	WRKY DNA-binding protein 75	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 107..166 e-value: 2.6E-36 score: 136.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 108..165 e-value: 9.8E-25 score: 86.6
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 102..167 score: 29.229555
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 91..166 e-value: 2.2E-33 score: 115.9
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 100..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..87
None	No IPR available	PANTHER	PTHR31221:SF111	WRKY TRANSCRIPTION FACTOR 43-RELATED	coord: 24..182
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 24..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026286.1	MS026286.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding