MS026239 (gene) Bitter gourd (TR) v1

Overview


Name	MS026239
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold797: 1047344 .. 1049575 (-)
RNA-Seq Expression	MS026239
Synteny	MS026239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCTCCATAAACCCTATTGTTACCGCTCATTATCCACTCTATGCTCTCCCGCCGACGCTCTTCTTGCTGACAAAGCCATCGTCTATCTCAGGCGCCACCCCGATCACCTCAACTTTCTTTCTCCCCACTTCACTCCCCAAGCTTCCTCGAATTTACTCCTGAAGTCACAATTCGACCAGAATTTAGTCGTCAAATTCCTTGATTGGGCACGGAGCCAGAGGTTCTTCTCCTTCCAATGCAAATGCCTCGCGCTCCACATCCTCACTCGCTTCAAACTCTACAGAACGGCGCAATCTCTTGCCGAGGAAGTAGCTGTCAATTCGATTGATGAAACTGGCGCCGAGCTCTTTCAATGCCTTAAGGACTCGTATCATCTGTGCAATTCGAGCTCGGCGGTGTTTGATCTGGTAGTTAAGTCTTATTCTCACGTTAACTTGATCAATAAGGCTTTGAACATTGTTAATTTAGCTAAGTCTCATGGCTTTATGCCGGGCGTGCTTTCGTATAATGCTATTTTAGATGCGGTAATTAGGACGAAACAGTCTGTTAAGTTTGCGGAGGAGGTATTTAAGGAGATGATGGGAACTGGGATTTCGCCCAATGTGTTTACATATAACATTTTGATTCGCGGTTTTTGCTCTGCTGGAAATTTGGAGATGGGTTTATCTTTTTTCGGTGAAATGGAGAGAAATGGGTGTTTGCCGAACGTGGTTACCTATAATACAATAATTGATGCTTATTGTAAGTTAAGGAAGATCGACGAGGCATTTGGGTTATTGAGATCGATGGCATTCAAAGGCTTGGAGCCAAATTTGATTTCATACAATGTGGTTATAAATGGGTTATGTCGAGAGGGAAGAATGAAGGATACAAGTGACATTCTTGAGGAAATGAATAGAAGGAGATATGTTCCTGATGAGGTGACTTTTAATACACTTATAAATGGATACTGTAAGGAAGGTAATTTTCATCAAGCACTTGTGTTGCATGCAGATATGATGAAGAATGGTCTATCCCCGAATGTTGTTACGTATACAACTTTGATTAATAGTATGTGCAAGGCTGGTAATTTGAATAGAGCAATGGAGTTTTTGGATCAGATGCGAGATAGAGGGCTATGTCCTAATGGGAGGACGTATACAACATTGATTGATGGATTTTCTCAGCAGGGATTATTAAACCAAGCTTACCAAGTTATGAAAGAAATGGTTGAGAATGGATTCACCCCTACAATTGTAACTTATAATGCTCTCATCAATGGGCATTGCATATTAGGGGGGATGGAAGAGGCCAATGGGGTCCTTCAAGAAATGGTGGAGAGAGGTTTTATCCCCGACGTTGTAAGCTATAGTACCATAATTTCTGGTTTTTGTCGAAATCAAGAATTGGAAAAAGCTTTTCAACTGAAAGTGGAGATGGTGACGAAGGGCATTTCTCCTGATGCAGTAACTTACTCATCACTAATTCAAGGTCTTTGTCAGCAGAGAAAACTTAGTGAAGCTTGTGATCTCTTTCAAGAAATGCTAAGCGCAGGTTTGTCTCCGGATGAAGTTACTTACACATCCTTGATCAATGCTTACTGCACTGAAGGGGATTTAGATAAGGCTCTTAGGTTGCATGATGAAATGATTCAGAAGGGGTTTTCGCCTGATATTGTCACCTACAATGTGCTTATTAATGGATTAAATAAACAAGCTCGTACGAGGGAAGCAAAGAGGCTTCTGCTGAAGTTATTATATGAAGAGTCTGTGCCAAATGAGGTCACATATAATACTCTAATAGAAAACTGCAACAATTTGGAATTCAAGAGTGCCTTGGCTCTTATGAAGGGATTCTGTATGAAGGGCTTGATGAATGAAGCAGACAGAATTTTTGAGTCAATGCTTCAAAAAGATTACAAAACCAATGAGGCAGTTTACAATGTCATTATACATGGTCACAGTAAAGTTGGAAATATTGAAAAAGCATACAATTTATATAAGAAAATGTTGTGTTTTGGATTTGTTCCCCACTCTGTGACTATTATGGCTCTGGCAAAATCACTATTTGATGAAGGAAAAGATGTAGAGTTGAATCAACTTCTTGAGAGCACACTCAAAAGCTGTAGGATAAATGACGCAGAGCTAGCGAAAGAACTCGTCAAAATCAACCATAAAGAAGGTAACATGGATGCAGTTTTCAATGTGCTTAAAGCTATGGCTCACAGTGGCTTACTACCATACAGTTAA

mRNA sequence

ATGCTCCTCCATAAACCCTATTGTTACCGCTCATTATCCACTCTATGCTCTCCCGCCGACGCTCTTCTTGCTGACAAAGCCATCGTCTATCTCAGGCGCCACCCCGATCACCTCAACTTTCTTTCTCCCCACTTCACTCCCCAAGCTTCCTCGAATTTACTCCTGAAGTCACAATTCGACCAGAATTTAGTCGTCAAATTCCTTGATTGGGCACGGAGCCAGAGGTTCTTCTCCTTCCAATGCAAATGCCTCGCGCTCCACATCCTCACTCGCTTCAAACTCTACAGAACGGCGCAATCTCTTGCCGAGGAAGTAGCTGTCAATTCGATTGATGAAACTGGCGCCGAGCTCTTTCAATGCCTTAAGGACTCGTATCATCTGTGCAATTCGAGCTCGGCGGTGTTTGATCTGGTAGTTAAGTCTTATTCTCACGTTAACTTGATCAATAAGGCTTTGAACATTGTTAATTTAGCTAAGTCTCATGGCTTTATGCCGGGCGTGCTTTCGTATAATGCTATTTTAGATGCGGTAATTAGGACGAAACAGTCTGTTAAGTTTGCGGAGGAGGTATTTAAGGAGATGATGGGAACTGGGATTTCGCCCAATGTGTTTACATATAACATTTTGATTCGCGGTTTTTGCTCTGCTGGAAATTTGGAGATGGGTTTATCTTTTTTCGGTGAAATGGAGAGAAATGGGTGTTTGCCGAACGTGGTTACCTATAATACAATAATTGATGCTTATTGTAAGTTAAGGAAGATCGACGAGGCATTTGGGTTATTGAGATCGATGGCATTCAAAGGCTTGGAGCCAAATTTGATTTCATACAATGTGGTTATAAATGGGTTATGTCGAGAGGGAAGAATGAAGGATACAAGTGACATTCTTGAGGAAATGAATAGAAGGAGATATGTTCCTGATGAGGTGACTTTTAATACACTTATAAATGGATACTGTAAGGAAGGTAATTTTCATCAAGCACTTGTGTTGCATGCAGATATGATGAAGAATGGTCTATCCCCGAATGTTGTTACGTATACAACTTTGATTAATAGTATGTGCAAGGCTGGTAATTTGAATAGAGCAATGGAGTTTTTGGATCAGATGCGAGATAGAGGGCTATGTCCTAATGGGAGGACGTATACAACATTGATTGATGGATTTTCTCAGCAGGGATTATTAAACCAAGCTTACCAAGTTATGAAAGAAATGGTTGAGAATGGATTCACCCCTACAATTGTAACTTATAATGCTCTCATCAATGGGCATTGCATATTAGGGGGGATGGAAGAGGCCAATGGGGTCCTTCAAGAAATGGTGGAGAGAGGTTTTATCCCCGACGTTGTAAGCTATAGTACCATAATTTCTGGTTTTTGTCGAAATCAAGAATTGGAAAAAGCTTTTCAACTGAAAGTGGAGATGGTGACGAAGGGCATTTCTCCTGATGCAGTAACTTACTCATCACTAATTCAAGGTCTTTGTCAGCAGAGAAAACTTAGTGAAGCTTGTGATCTCTTTCAAGAAATGCTAAGCGCAGGTTTGTCTCCGGATGAAGTTACTTACACATCCTTGATCAATGCTTACTGCACTGAAGGGGATTTAGATAAGGCTCTTAGGTTGCATGATGAAATGATTCAGAAGGGGTTTTCGCCTGATATTGTCACCTACAATGTGCTTATTAATGGATTAAATAAACAAGCTCGTACGAGGGAAGCAAAGAGGCTTCTGCTGAAGTTATTATATGAAGAGTCTGTGCCAAATGAGGTCACATATAATACTCTAATAGAAAACTGCAACAATTTGGAATTCAAGAGTGCCTTGGCTCTTATGAAGGGATTCTGTATGAAGGGCTTGATGAATGAAGCAGACAGAATTTTTGAGTCAATGCTTCAAAAAGATTACAAAACCAATGAGGCAGTTTACAATGTCATTATACATGGTCACAGTAAAGTTGGAAATATTGAAAAAGCATACAATTTATATAAGAAAATGTTGTGTTTTGGATTTGTTCCCCACTCTGTGACTATTATGGCTCTGGCAAAATCACTATTTGATGAAGGAAAAGATGTAGAGTTGAATCAACTTCTTGAGAGCACACTCAAAAGCTGTAGGATAAATGACGCAGAGCTAGCGAAAGAACTCGTCAAAATCAACCATAAAGAAGGTAACATGGATGCAGTTTTCAATGTGCTTAAAGCTATGGCTCACAGTGGCTTACTACCATACAGTTAA

Coding sequence (CDS)

ATGCTCCTCCATAAACCCTATTGTTACCGCTCATTATCCACTCTATGCTCTCCCGCCGACGCTCTTCTTGCTGACAAAGCCATCGTCTATCTCAGGCGCCACCCCGATCACCTCAACTTTCTTTCTCCCCACTTCACTCCCCAAGCTTCCTCGAATTTACTCCTGAAGTCACAATTCGACCAGAATTTAGTCGTCAAATTCCTTGATTGGGCACGGAGCCAGAGGTTCTTCTCCTTCCAATGCAAATGCCTCGCGCTCCACATCCTCACTCGCTTCAAACTCTACAGAACGGCGCAATCTCTTGCCGAGGAAGTAGCTGTCAATTCGATTGATGAAACTGGCGCCGAGCTCTTTCAATGCCTTAAGGACTCGTATCATCTGTGCAATTCGAGCTCGGCGGTGTTTGATCTGGTAGTTAAGTCTTATTCTCACGTTAACTTGATCAATAAGGCTTTGAACATTGTTAATTTAGCTAAGTCTCATGGCTTTATGCCGGGCGTGCTTTCGTATAATGCTATTTTAGATGCGGTAATTAGGACGAAACAGTCTGTTAAGTTTGCGGAGGAGGTATTTAAGGAGATGATGGGAACTGGGATTTCGCCCAATGTGTTTACATATAACATTTTGATTCGCGGTTTTTGCTCTGCTGGAAATTTGGAGATGGGTTTATCTTTTTTCGGTGAAATGGAGAGAAATGGGTGTTTGCCGAACGTGGTTACCTATAATACAATAATTGATGCTTATTGTAAGTTAAGGAAGATCGACGAGGCATTTGGGTTATTGAGATCGATGGCATTCAAAGGCTTGGAGCCAAATTTGATTTCATACAATGTGGTTATAAATGGGTTATGTCGAGAGGGAAGAATGAAGGATACAAGTGACATTCTTGAGGAAATGAATAGAAGGAGATATGTTCCTGATGAGGTGACTTTTAATACACTTATAAATGGATACTGTAAGGAAGGTAATTTTCATCAAGCACTTGTGTTGCATGCAGATATGATGAAGAATGGTCTATCCCCGAATGTTGTTACGTATACAACTTTGATTAATAGTATGTGCAAGGCTGGTAATTTGAATAGAGCAATGGAGTTTTTGGATCAGATGCGAGATAGAGGGCTATGTCCTAATGGGAGGACGTATACAACATTGATTGATGGATTTTCTCAGCAGGGATTATTAAACCAAGCTTACCAAGTTATGAAAGAAATGGTTGAGAATGGATTCACCCCTACAATTGTAACTTATAATGCTCTCATCAATGGGCATTGCATATTAGGGGGGATGGAAGAGGCCAATGGGGTCCTTCAAGAAATGGTGGAGAGAGGTTTTATCCCCGACGTTGTAAGCTATAGTACCATAATTTCTGGTTTTTGTCGAAATCAAGAATTGGAAAAAGCTTTTCAACTGAAAGTGGAGATGGTGACGAAGGGCATTTCTCCTGATGCAGTAACTTACTCATCACTAATTCAAGGTCTTTGTCAGCAGAGAAAACTTAGTGAAGCTTGTGATCTCTTTCAAGAAATGCTAAGCGCAGGTTTGTCTCCGGATGAAGTTACTTACACATCCTTGATCAATGCTTACTGCACTGAAGGGGATTTAGATAAGGCTCTTAGGTTGCATGATGAAATGATTCAGAAGGGGTTTTCGCCTGATATTGTCACCTACAATGTGCTTATTAATGGATTAAATAAACAAGCTCGTACGAGGGAAGCAAAGAGGCTTCTGCTGAAGTTATTATATGAAGAGTCTGTGCCAAATGAGGTCACATATAATACTCTAATAGAAAACTGCAACAATTTGGAATTCAAGAGTGCCTTGGCTCTTATGAAGGGATTCTGTATGAAGGGCTTGATGAATGAAGCAGACAGAATTTTTGAGTCAATGCTTCAAAAAGATTACAAAACCAATGAGGCAGTTTACAATGTCATTATACATGGTCACAGTAAAGTTGGAAATATTGAAAAAGCATACAATTTATATAAGAAAATGTTGTGTTTTGGATTTGTTCCCCACTCTGTGACTATTATGGCTCTGGCAAAATCACTATTTGATGAAGGAAAAGATGTAGAGTTGAATCAACTTCTTGAGAGCACACTCAAAAGCTGTAGGATAAATGACGCAGAGCTAGCGAAAGAACTCGTCAAAATCAACCATAAAGAAGGTAACATGGATGCAGTTTTCAATGTGCTTAAAGCTATGGCTCACAGTGGCTTACTACCATACAGTTAA

Protein sequence

MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFDQNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQCLKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHKEGNMDAVFNVLKAMAHSGLLPYS

Homology

[Close]

BLAST of MS026239 vs. NCBI nr
Match: XP_022135848.1 (pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135849.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135850.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135851.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia])

HSP 1 Score: 1486.1 bits (3846), Expect = 0.0e+00
Identity = 739/743 (99.46%), Postives = 741/743 (99.73%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD
Sbjct: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC
Sbjct: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTS+ILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSEILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI
Sbjct: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS
Sbjct: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL
Sbjct: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTN AVYNVIIHGHSKVGNIEKAYNL
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNGAVYNVIIHGHSKVGNIEKAYNL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK
Sbjct: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNVLK MAH+GLLPYS
Sbjct: 721 EGNMDAVFNVLKDMAHTGLLPYS 743

[Close]

BLAST of MS026239 vs. NCBI nr
Match: XP_022972338.1 (pentatricopeptide repeat-containing protein At5g39710 [Cucurbita maxima])

HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 668/743 (89.91%), Postives = 704/743 (94.75%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL+KP+ YRS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNKPHFYRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWARSQRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARSQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAE VFKEM+  G+SPNV+TYNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEGVFKEMIECGVSPNVYTYNILIRGFCAAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLINGYCKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTLNTLINGYCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTLIDGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLIDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+L E CDLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 PDTVTYSSLIQGLCEQRRLREVCDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLYEESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ NEAVYNVI HGHSKVGNIEKAY+L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPNEAVYNVITHGHSKVGNIEKAYSL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           Y++ML  GFVPHSVTIMALA  LF EGKDVELN++LE TLKSC+I DAELAK LV IN+K
Sbjct: 661 YEEMLQSGFVPHSVTIMALANLLFAEGKDVELNRVLEYTLKSCKITDAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. NCBI nr
Match: XP_022952422.1 (pentatricopeptide repeat-containing protein At5g39710 [Cucurbita moschata])

HSP 1 Score: 1345.5 bits (3481), Expect = 0.0e+00
Identity = 667/743 (89.77%), Postives = 703/743 (94.62%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL++P+CYRS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNRPHCYRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWAR QRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARYQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAE VFKEM+  G+SPNV+TYNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEGVFKEMIECGVSPNVYTYNILIRGFCAAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLINGYCKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTLNTLINGYCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTLIDGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLIDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+LSE CDLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 PDTVTYSSLIQGLCEQRRLSEVCDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLY ESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYVESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ +EAVYNVI HGHSKVGNIEKAY+L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPDEAVYNVITHGHSKVGNIEKAYSL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHSVTIMAL   LF EGKDVELN++LE TLKSCRI DAELAK LV IN+K
Sbjct: 661 YKEMLRSGFVPHSVTIMALGNLLFAEGKDVELNRVLEYTLKSCRIADAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. NCBI nr
Match: XP_023511577.1 (pentatricopeptide repeat-containing protein At5g39710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1344.7 bits (3479), Expect = 0.0e+00
Identity = 666/743 (89.64%), Postives = 702/743 (94.48%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL+KP+CYRS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNKPHCYRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWARSQRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARSQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSV FAE VFKEM+  G+SPNV+TYNILIRGFC+AGNLEMGLSFF EMERNGCLPNVVT
Sbjct: 181 KQSVNFAEGVFKEMIECGVSPNVYTYNILIRGFCTAGNLEMGLSFFDEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLING+CKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTMNTLINGHCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTL+DGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLVDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+LSE CDLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 PDTVTYSSLIQGLCEQRRLSEVCDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLY ESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYVESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ NEAVYNVI HGHSKVGNIEKAY L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPNEAVYNVITHGHSKVGNIEKAYGL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHSVTIMALA  LF EGKDVELN++LE TLKSC+I DAELAK LV IN+K
Sbjct: 661 YKEMLRSGFVPHSVTIMALANLLFAEGKDVELNRVLEYTLKSCKITDAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. NCBI nr
Match: KAG6571990.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1335.5 bits (3455), Expect = 0.0e+00
Identity = 664/743 (89.37%), Postives = 702/743 (94.48%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL+KP+C+RS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNKPHCFRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWAR QRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARYQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAE VFKEM+  G+SPNV++YNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEGVFKEMIECGVSPNVYSYNILIRGFCAAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLINGYCKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTLNTLINGYCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTLIDGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLIDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGQMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
            D VTYSSLIQGLC+QR+LSE  DLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 LDTVTYSSLIQGLCEQRRLSEVYDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLY ESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYVESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ +EAVYNVI HGHSKVGNIEKAY+L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPDEAVYNVITHGHSKVGNIEKAYSL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHSVTIMALA  LF EGKDVELN++LE TL+SCRI DAELAK LV IN+K
Sbjct: 661 YKEMLRSGFVPHSVTIMALANLLFAEGKDVELNRVLEYTLESCRIADAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 1036.2 bits (2678), Expect = 1.8e-301
Identity = 491/743 (66.08%), Postives = 628/743 (84.52%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLC-SPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQF 60
           M L K    RSLST   SP+D+LLADKA+ +L+RHP  L+ LS +FTP+A+SNLLLKSQ 
Sbjct: 1   MFLTKTLIRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQN 60

Query: 61  DQNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAEL-F 120
           DQ L++KFL+WA   +FF+ +CKC+ LHILT+FKLY+TAQ LAE+VA  ++D+  A L F
Sbjct: 61  DQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVF 120

Query: 121 QCLKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVI 180
           + L+++Y LC S+S+VFDLVVKSYS ++LI+KAL+IV+LA++HGFMPGVLSYNA+LDA I
Sbjct: 121 KSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 180

Query: 181 RTKQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNV 240
           R+K+++ FAE VFKEM+ + +SPNVFTYNILIRGFC AGN+++ L+ F +ME  GCLPNV
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240

Query: 241 VTYNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEE 300
           VTYNT+ID YCKLRKID+ F LLRSMA KGLEPNLISYNVVINGLCREGRMK+ S +L E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300

Query: 301 MNRRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGN 360
           MNRR Y  DEVT+NTLI GYCKEGNFHQALV+HA+M+++GL+P+V+TYT+LI+SMCKAGN
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360

Query: 361 LNRAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNA 420
           +NRAMEFLDQMR RGLCPN RTYTTL+DGFSQ+G +N+AY+V++EM +NGF+P++VTYNA
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420

Query: 421 LINGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKG 480
           LINGHC+ G ME+A  VL++M E+G  PDVVSYST++SGFCR+ ++++A ++K EMV KG
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480

Query: 481 ISPDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKAL 540
           I PD +TYSSLIQG C+QR+  EACDL++EML  GL PDE TYT+LINAYC EGDL+KAL
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 541 RLHDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENC 600
           +LH+EM++KG  PD+VTY+VLINGLNKQ+RTREAKRLLLKL YEESVP++VTY+TLIENC
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 601 NNLEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAY 660
           +N+EFKS ++L+KGFCMKG+M EAD++FESML K++K +   YN++IHGH + G+I KAY
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 661 NLYKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKIN 720
            LYK+M+  GF+ H+VT++AL K+L  EGK  ELN ++   L+SC +++AE AK LV+IN
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720

Query: 721 HKEGNMDAVFNVLKAMAHSGLLP 742
           H+EGNMD V +VL  MA  G LP
Sbjct: 721 HREGNMDVVLDVLAEMAKDGFLP 743

[Close]

BLAST of MS026239 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-92
Identity = 199/632 (31.49%), Postives = 325/632 (51.42%), Query Frame = 0


Query: 63  LVVKFLDWARSQRFFS----FQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELF 122
           L +KFL W   Q         Q  C+  HIL R ++Y  A+ + +E+++ S     + +F
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS--GKSSFVF 111

Query: 123 QCLKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVI 182
             L  +Y LCNS+ +V+D++++ Y    +I  +L I  L   +GF P V + NAIL +V+
Sbjct: 112 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 171

Query: 183 RTKQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNV 242
           ++ + V       KEM+   I P+V T+NILI   C+ G+ E       +ME++G  P +
Sbjct: 172 KSGEDVS-VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 231

Query: 243 VTYNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEE 302
           VTYNT++  YCK  +   A  LL  M  KG++ ++ +YN++I+ LCR  R+     +L +
Sbjct: 232 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 291

Query: 303 MNRRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGN 362
           M +R   P+EVT+NTLING+  EG    A  L  +M+  GLSPN VT+  LI+     GN
Sbjct: 292 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 351

Query: 363 LNRAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNA 422
              A++    M  +GL P+  +Y  L+DG  +    + A      M  NG     +TY  
Sbjct: 352 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 411

Query: 423 LINGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKG 482
           +I+G C  G ++EA  +L EM + G  PD+V+YS +I+GFC+    + A ++   +   G
Sbjct: 412 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 471

Query: 483 ISPDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKAL 542
           +SP+ + YS+LI   C+   L EA  +++ M+  G + D  T+  L+ + C  G + +A 
Sbjct: 472 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 531

Query: 543 RLHDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENC 602
                M   G  P+ V+++ LING        +A  +  ++      P   TY       
Sbjct: 532 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG------ 591

Query: 603 NNLEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAY 662
                    +L+KG C  G + EA++  +S+       +  +YN ++    K GN+ KA 
Sbjct: 592 ---------SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 651

Query: 663 NLYKKMLCFGFVPHSVTIMALAKSLFDEGKDV 691
           +L+ +M+    +P S T  +L   L  +GK V
Sbjct: 652 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

[Close]

BLAST of MS026239 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-91
Identity = 208/719 (28.93%), Postives = 349/719 (48.54%), Query Frame = 0


Query: 28  IVYLRRHPDHLNFLSPHFTPQASSNL---LLKSQFDQNLVVKFLDWARSQRFFSFQCKCL 87
           ++ LRR       L P+     + +L   L+K + D  LV+ F DWARS+R  + +  C+
Sbjct: 65  VIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCI 124

Query: 88  ALHILTRFKLYRTAQSLAE---EVAVNSIDETGAELFQCLKDSYHLCNSSSAVFDLVVKS 147
            +H+    K  + AQSL     E    ++ ++  + F  L  +Y    S   VFD+  + 
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184

Query: 148 YSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEMMGTGISP 207
                L+ +A  +     ++G +  V S N  L  + +       A  VF+E    G+  
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244

Query: 208 NVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKIDEAFGLL 267
           NV +YNI+I   C  G ++        ME  G  P+V++Y+T+++ YC+  ++D+ + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 268 RSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTLINGYCKE 327
             M  KGL+PN   Y  +I  LCR                                 CK 
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCR--------------------------------ICKL 364

Query: 328 GNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLCPNGRTY 387
               +A    ++M++ G+ P+ V YTTLI+  CK G++  A +F  +M  R + P+  TY
Sbjct: 365 AEAEEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 424

Query: 388 TTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANGVLQEMVE 447
           T +I GF Q G + +A ++  EM   G  P  VT+  LING+C  G M++A  V   M++
Sbjct: 425 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 484

Query: 448 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLCQQRKLSE 507
            G  P+VV+Y+T+I G C+  +L+ A +L  EM   G+ P+  TY+S++ GLC+   + E
Sbjct: 485 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 544

Query: 508 ACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIVTYNVLIN 567
           A  L  E  +AGL+ D VTYT+L++AYC  G++DKA  +  EM+ KG  P IVT+NVL+N
Sbjct: 545 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 604

Query: 568 GLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFCMKGLMNE 627
           G        + ++LL  +L +   PN  T+N+L+               K +C++  +  
Sbjct: 605 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV---------------KQYCIRNNLKA 664

Query: 628 ADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSVTIMALAK 687
           A  I++ M  +    +   Y  ++ GH K  N+++A+ L+++M   GF     T   L K
Sbjct: 665 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 724

Query: 688 SLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHKEGNMDAVFNVLKAMAHSGLL 741
                 K +E  ++ +   +     D E+        +K    D + + +  +  + L+
Sbjct: 725 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733

[Close]

BLAST of MS026239 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-87
Identity = 173/562 (30.78%), Postives = 298/562 (53.02%), Query Frame = 0


Query: 135 FDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEM 194
           F  ++ + + +N  +  +++    ++ G    + +Y+ +++   R  Q +  A  V  +M
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ-LSLALAVLAKM 143

Query: 195 MGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
           M  G  P++ T N L+ GFC    +   +S  G+M   G  P+  T+NT+I    +  + 
Sbjct: 144 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 203

Query: 255 DEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTL 314
            EA  L+  M  KG +P+L++Y +V+NGLC+ G +     +L++M + +  P  V +NT+
Sbjct: 204 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 263

Query: 315 INGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
           I+  C   N + AL L  +M   G+ PNVVTY +LI  +C  G  + A   L  M +R +
Sbjct: 264 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 323

Query: 375 CPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANG 434
            PN  T++ LID F ++G L +A ++  EM++    P I TY++LING C+   ++EA  
Sbjct: 324 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 383

Query: 435 VLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLC 494
           + + M+ +   P+VV+Y+T+I GFC+ + +++  +L  EM  +G+  + VTY++LI G  
Sbjct: 384 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 443

Query: 495 QQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIV 554
           Q R+   A  +F++M+S G+ PD +TY+ L++  C  G ++ AL + + + +    PDI 
Sbjct: 444 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 503

Query: 555 TYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFC 614
           TYN++I G+ K  +  +   L   L  +   PN VTY T               +M GFC
Sbjct: 504 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT---------------MMSGFC 563

Query: 615 MKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSV 674
            KGL  EAD +F  M ++    +   YN +I  H + G+   +  L ++M    FV  + 
Sbjct: 564 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 623

Query: 675 TIMALAKSLFDEGKDVELNQLL 697
           TI  +   L D   D    ++L
Sbjct: 624 TIGLVTNMLHDGRLDKSFLKML 629

[Close]

BLAST of MS026239 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-87
Identity = 178/562 (31.67%), Postives = 299/562 (53.20%), Query Frame = 0


Query: 135 FDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEM 194
           F  ++ + + +N  +  +++    ++ G      +Y+ +++   R  Q +  A  V  +M
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKM 143

Query: 195 MGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
           M  G  PN+ T + L+ G+C +  +   ++   +M   G  PN VT+NT+I       K 
Sbjct: 144 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 203

Query: 255 DEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTL 314
            EA  L+  M  KG +P+L++Y VV+NGLC+ G      ++L +M + +  P  + +NT+
Sbjct: 204 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 263

Query: 315 INGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
           I+G CK  +   AL L  +M   G+ PNVVTY++LI+ +C  G  + A   L  M +R +
Sbjct: 264 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 323

Query: 375 CPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANG 434
            P+  T++ LID F ++G L +A ++  EMV+    P+IVTY++LING C+   ++EA  
Sbjct: 324 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 383

Query: 435 VLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLC 494
           + + MV +   PDVV+Y+T+I GFC+ + +E+  ++  EM  +G+  + VTY+ LIQGL 
Sbjct: 384 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 443

Query: 495 QQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIV 554
           Q      A ++F+EM+S G+ P+ +TY +L++  C  G L+KA+ + + + +    P I 
Sbjct: 444 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 503

Query: 555 TYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFC 614
           TYN++I G+ K  +  +   L   L  +   P+ V YNT+I                GFC
Sbjct: 504 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI---------------SGFC 563

Query: 615 MKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSV 674
            KG   EAD +F+ M +     N   YN +I    + G+ E +  L K+M   GF   + 
Sbjct: 564 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 623

Query: 675 TIMALAKSLFDEGKDVELNQLL 697
           TI  +   L D   D     +L
Sbjct: 624 TIGLVTNMLHDGRLDKSFLDML 629

[Close]

BLAST of MS026239 vs. ExPASy TrEMBL
Match: A0A6J1C1W8 (pentatricopeptide repeat-containing protein At5g39710 OS=Momordica charantia OX=3673 GN=LOC111007700 PE=4 SV=1)

HSP 1 Score: 1486.1 bits (3846), Expect = 0.0e+00
Identity = 739/743 (99.46%), Postives = 741/743 (99.73%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD
Sbjct: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC
Sbjct: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTS+ILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSEILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI
Sbjct: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS
Sbjct: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL
Sbjct: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTN AVYNVIIHGHSKVGNIEKAYNL
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNGAVYNVIIHGHSKVGNIEKAYNL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK
Sbjct: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNVLK MAH+GLLPYS
Sbjct: 721 EGNMDAVFNVLKDMAHTGLLPYS 743

[Close]

BLAST of MS026239 vs. ExPASy TrEMBL
Match: A0A6J1I9N0 (pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita maxima OX=3661 GN=LOC111470919 PE=4 SV=1)

HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 668/743 (89.91%), Postives = 704/743 (94.75%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL+KP+ YRS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNKPHFYRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWARSQRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARSQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAE VFKEM+  G+SPNV+TYNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEGVFKEMIECGVSPNVYTYNILIRGFCAAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLINGYCKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTLNTLINGYCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTLIDGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLIDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+L E CDLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 PDTVTYSSLIQGLCEQRRLREVCDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLYEESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ NEAVYNVI HGHSKVGNIEKAY+L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPNEAVYNVITHGHSKVGNIEKAYSL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           Y++ML  GFVPHSVTIMALA  LF EGKDVELN++LE TLKSC+I DAELAK LV IN+K
Sbjct: 661 YEEMLQSGFVPHSVTIMALANLLFAEGKDVELNRVLEYTLKSCKITDAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. ExPASy TrEMBL
Match: A0A6J1GKD6 (pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita moschata OX=3662 GN=LOC111455115 PE=4 SV=1)

HSP 1 Score: 1345.5 bits (3481), Expect = 0.0e+00
Identity = 667/743 (89.77%), Postives = 703/743 (94.62%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           MLL++P+CYRS+STLCSPADALLADKAIVYLRRHPD L  LS HFTPQASSNLLLKSQFD
Sbjct: 1   MLLNRPHCYRSISTLCSPADALLADKAIVYLRRHPDQLAILSSHFTPQASSNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           QNLV+KFLDWAR QRFFSFQCKCLALHILTRFKLY+TAQSLAEEVAVN+IDETGAELFQC
Sbjct: 61  QNLVLKFLDWARYQRFFSFQCKCLALHILTRFKLYKTAQSLAEEVAVNTIDETGAELFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LKDSYHLCNSSSAV DLVVKS S VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKDSYHLCNSSSAVIDLVVKSCSRVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVKFAE VFKEM+  G+SPNV+TYNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKFAEGVFKEMIECGVSPNVYTYNILIRGFCAAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMK+TSDILEEMN
Sbjct: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKETSDILEEMN 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPDEVT NTLINGYCKEGNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 KRRYVPDEVTLNTLINGYCKEGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAMEFLDQMRDRGL PNGRTYTTLIDGFSQQGLLNQAYQVMKEM+ENGFTPTIVTYN LI
Sbjct: 361 RAMEFLDQMRDRGLRPNGRTYTTLIDGFSQQGLLNQAYQVMKEMIENGFTPTIVTYNTLI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG MEEA  +LQEM E+GF PDVVSYSTIISGFCRN+ELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEEAAELLQEMTEKGFTPDVVSYSTIISGFCRNRELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+LSE CDLFQEM+S GLSPDEVTYTSLINAYCTEGDLDKAL L
Sbjct: 481 PDTVTYSSLIQGLCEQRRLSEVCDLFQEMVSVGLSPDEVTYTSLINAYCTEGDLDKALGL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMI+KGF PDIVTYNVLINGLNKQART+EAKRLLLKLLY ESVPNE+TYNTLI+NCNN
Sbjct: 541 HDEMIKKGFLPDIVTYNVLINGLNKQARTKEAKRLLLKLLYVESVPNEITYNTLIDNCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           LEFKSALALMKGFCMKGLMNEADR+FESMLQK Y+ +EAVYNVI HGHSKVGNIEKAY+L
Sbjct: 601 LEFKSALALMKGFCMKGLMNEADRVFESMLQKGYEPDEAVYNVITHGHSKVGNIEKAYSL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHSVTIMAL   LF EGKDVELN++LE TLKSCRI DAELAK LV IN+K
Sbjct: 661 YKEMLRSGFVPHSVTIMALGNLLFAEGKDVELNRVLEYTLKSCRIADAELAKVLVDINNK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNV+K MAHSGLLPYS
Sbjct: 721 EGNMDAVFNVIKDMAHSGLLPYS 743

[Close]

BLAST of MS026239 vs. ExPASy TrEMBL
Match: A0A5D3C4F1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00380 PE=4 SV=1)

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 643/743 (86.54%), Postives = 687/743 (92.46%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           ML H P  YRS+STL SP DALLADKAIVYLRRHP+ L  LS HFTPQAS NLLLKSQFD
Sbjct: 1   MLRHNPRYYRSISTLFSPGDALLADKAIVYLRRHPEQLTLLSSHFTPQASFNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           Q+L +KFL+WARSQ+FFSFQCKCLALHILTRFKLY+ AQSLAEEV VN++DETG +LFQC
Sbjct: 61  QHLFLKFLNWARSQQFFSFQCKCLALHILTRFKLYKAAQSLAEEVVVNTVDETGQDLFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LK+SYH C SSSAVFDLVVKS + VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKNSYHQCKSSSAVFDLVVKSCARVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVK AE VFKEM+ +G+SPNV+TYNILIRGFC+AGNLEMGLSFFGEMERNGCLPNVVT
Sbjct: 181 KQSVKMAEGVFKEMIESGVSPNVYTYNILIRGFCTAGNLEMGLSFFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAF L RSMA KGL+PNLISYNVVINGLCREG+MK+TS+ILEEM+
Sbjct: 241 YNTIIDAYCKLRKIDEAFKLFRSMALKGLDPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPD+VTFNTLINGYC  GNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 QRRYVPDQVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAME LDQMR RGL PNGRTYTTLIDGFSQQGLL QAYQVMKEMVENGFTPTI+TYNALI
Sbjct: 361 RAMEILDQMRGRGLHPNGRTYTTLIDGFSQQGLLKQAYQVMKEMVENGFTPTIITYNALI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG ME+A+G+LQEMVERGF+PDVVSYSTIISGFCRNQELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEDASGLLQEMVERGFMPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+L E CDLFQEMLS GL PDEVTYTSLINAYC EG LDKALRL
Sbjct: 481 PDVVTYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGGLDKALRL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMIQKGFSPDIVTYNVLINGLNKQART+EAKRLLLKLLYEESVPNE+TYNTLIENCNN
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTKEAKRLLLKLLYEESVPNEITYNTLIENCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           L+FKSALALMKGFCMKGLMNEADR+FESML+K YK NE +YNVIIHGHSKVGNIEKAYNL
Sbjct: 601 LDFKSALALMKGFCMKGLMNEADRVFESMLRKGYKLNEELYNVIIHGHSKVGNIEKAYNL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHS TIMALAKSL+ EGKDVELNQLL+ TLKSCRI +  LAK LV IN K
Sbjct: 661 YKEMLHSGFVPHSETIMALAKSLYSEGKDVELNQLLDYTLKSCRITEGALAKVLVGINSK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNVLK MA SGLLPYS
Sbjct: 721 EGNMDAVFNVLKDMALSGLLPYS 743

[Close]

BLAST of MS026239 vs. ExPASy TrEMBL
Match: A0A1S4E0J0 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g39710-like OS=Cucumis melo OX=3656 GN=LOC103495222 PE=4 SV=1)

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 642/743 (86.41%), Postives = 686/743 (92.33%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLCSPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQFD 60
           ML H P  YRS+STL SP DALLADKAIVYLRRHP+ L  LS HFTPQAS NLLLKSQFD
Sbjct: 1   MLRHNPRYYRSISTLFSPGDALLADKAIVYLRRHPEQLTLLSSHFTPQASFNLLLKSQFD 60

Query: 61  QNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELFQC 120
           Q+L +KFL+WARSQ+FFSFQCKCLALHILTRFKLY+ AQSLAEEV VN++DETG +LFQC
Sbjct: 61  QHLFLKFLNWARSQQFFSFQCKCLALHILTRFKLYKAAQSLAEEVVVNTVDETGQDLFQC 120

Query: 121 LKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRT 180
           LK+SYH C SSSAVFDLVVKS + VNLINKALNIVNLAKSHGFMPGVLSYNA+LDAVIRT
Sbjct: 121 LKNSYHQCKSSSAVFDLVVKSCARVNLINKALNIVNLAKSHGFMPGVLSYNAVLDAVIRT 180

Query: 181 KQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVT 240
           KQSVK AE VFKEM+ +G+SPNV+TYNILIRGFC+AGNLEMGLS FGEMERNGCLPNVVT
Sbjct: 181 KQSVKMAEGVFKEMIESGVSPNVYTYNILIRGFCTAGNLEMGLSXFGEMERNGCLPNVVT 240

Query: 241 YNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMN 300
           YNTIIDAYCKLRKIDEAF L RSMA KGL+PNLISYNVVINGLCREG+MK+TS+ILEEM+
Sbjct: 241 YNTIIDAYCKLRKIDEAFKLFRSMALKGLDPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 301 RRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLN 360
           +RRYVPD+VTFNTLINGYC  GNFHQALVLHA+M+KNGLSPNVVTYTTLINSMCKAGNLN
Sbjct: 301 QRRYVPDQVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 361 RAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALI 420
           RAME LDQMR RGL PNGRTYTTLIDGFSQQGLL QAYQVMKEMVENGFTPTI+TYNALI
Sbjct: 361 RAMEILDQMRGRGLHPNGRTYTTLIDGFSQQGLLKQAYQVMKEMVENGFTPTIITYNALI 420

Query: 421 NGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGIS 480
           NGHCILG ME+A+G+LQEMVERGF+PDVVSYSTIISGFCRNQELEKAFQLKVEMV KGIS
Sbjct: 421 NGHCILGRMEDASGLLQEMVERGFMPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 481 PDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRL 540
           PD VTYSSLIQGLC+QR+L E CDLFQEMLS GL PDEVTYTSLINAYC EG LDKALRL
Sbjct: 481 PDVVTYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGGLDKALRL 540

Query: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNN 600
           HDEMIQKGFSPDIVTYNVLINGLNKQART+EAKRLLLKLLYEESVPNE+TYNTLIENCNN
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGLNKQARTKEAKRLLLKLLYEESVPNEITYNTLIENCNN 600

Query: 601 LEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNL 660
           L+FKSALALMKGFCMKGLMNEADR+FESML+K YK NE +YNVIIHGHSKVGNIEKAYNL
Sbjct: 601 LDFKSALALMKGFCMKGLMNEADRVFESMLRKGYKLNEELYNVIIHGHSKVGNIEKAYNL 660

Query: 661 YKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHK 720
           YK+ML  GFVPHS TIMALAKSL+ EGKDVELNQLL+ TLKSCRI +  LAK LV IN K
Sbjct: 661 YKEMLHSGFVPHSETIMALAKSLYSEGKDVELNQLLDYTLKSCRITEGALAKVLVGINSK 720

Query: 721 EGNMDAVFNVLKAMAHSGLLPYS 744
           EGNMDAVFNVLK MA SGLLPYS
Sbjct: 721 EGNMDAVFNVLKDMALSGLLPYS 743

[Close]

BLAST of MS026239 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1036.2 bits (2678), Expect = 1.3e-302
Identity = 491/743 (66.08%), Postives = 628/743 (84.52%), Query Frame = 0


Query: 1   MLLHKPYCYRSLSTLC-SPADALLADKAIVYLRRHPDHLNFLSPHFTPQASSNLLLKSQF 60
           M L K    RSLST   SP+D+LLADKA+ +L+RHP  L+ LS +FTP+A+SNLLLKSQ 
Sbjct: 1   MFLTKTLIRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQN 60

Query: 61  DQNLVVKFLDWARSQRFFSFQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAEL-F 120
           DQ L++KFL+WA   +FF+ +CKC+ LHILT+FKLY+TAQ LAE+VA  ++D+  A L F
Sbjct: 61  DQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVF 120

Query: 121 QCLKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVI 180
           + L+++Y LC S+S+VFDLVVKSYS ++LI+KAL+IV+LA++HGFMPGVLSYNA+LDA I
Sbjct: 121 KSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 180

Query: 181 RTKQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNV 240
           R+K+++ FAE VFKEM+ + +SPNVFTYNILIRGFC AGN+++ L+ F +ME  GCLPNV
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240

Query: 241 VTYNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEE 300
           VTYNT+ID YCKLRKID+ F LLRSMA KGLEPNLISYNVVINGLCREGRMK+ S +L E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300

Query: 301 MNRRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGN 360
           MNRR Y  DEVT+NTLI GYCKEGNFHQALV+HA+M+++GL+P+V+TYT+LI+SMCKAGN
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360

Query: 361 LNRAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNA 420
           +NRAMEFLDQMR RGLCPN RTYTTL+DGFSQ+G +N+AY+V++EM +NGF+P++VTYNA
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420

Query: 421 LINGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKG 480
           LINGHC+ G ME+A  VL++M E+G  PDVVSYST++SGFCR+ ++++A ++K EMV KG
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480

Query: 481 ISPDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKAL 540
           I PD +TYSSLIQG C+QR+  EACDL++EML  GL PDE TYT+LINAYC EGDL+KAL
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 541 RLHDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENC 600
           +LH+EM++KG  PD+VTY+VLINGLNKQ+RTREAKRLLLKL YEESVP++VTY+TLIENC
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 601 NNLEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAY 660
           +N+EFKS ++L+KGFCMKG+M EAD++FESML K++K +   YN++IHGH + G+I KAY
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 661 NLYKKMLCFGFVPHSVTIMALAKSLFDEGKDVELNQLLESTLKSCRINDAELAKELVKIN 720
            LYK+M+  GF+ H+VT++AL K+L  EGK  ELN ++   L+SC +++AE AK LV+IN
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720

Query: 721 HKEGNMDAVFNVLKAMAHSGLLP 742
           H+EGNMD V +VL  MA  G LP
Sbjct: 721 HREGNMDVVLDVLAEMAKDGFLP 743

[Close]

BLAST of MS026239 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-93
Identity = 199/632 (31.49%), Postives = 325/632 (51.42%), Query Frame = 0


Query: 63  LVVKFLDWARSQRFFS----FQCKCLALHILTRFKLYRTAQSLAEEVAVNSIDETGAELF 122
           L +KFL W   Q         Q  C+  HIL R ++Y  A+ + +E+++ S     + +F
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS--GKSSFVF 151

Query: 123 QCLKDSYHLCNSSSAVFDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVI 182
             L  +Y LCNS+ +V+D++++ Y    +I  +L I  L   +GF P V + NAIL +V+
Sbjct: 152 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 211

Query: 183 RTKQSVKFAEEVFKEMMGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNV 242
           ++ + V       KEM+   I P+V T+NILI   C+ G+ E       +ME++G  P +
Sbjct: 212 KSGEDVS-VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 271

Query: 243 VTYNTIIDAYCKLRKIDEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEE 302
           VTYNT++  YCK  +   A  LL  M  KG++ ++ +YN++I+ LCR  R+     +L +
Sbjct: 272 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 331

Query: 303 MNRRRYVPDEVTFNTLINGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGN 362
           M +R   P+EVT+NTLING+  EG    A  L  +M+  GLSPN VT+  LI+     GN
Sbjct: 332 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 391

Query: 363 LNRAMEFLDQMRDRGLCPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNA 422
              A++    M  +GL P+  +Y  L+DG  +    + A      M  NG     +TY  
Sbjct: 392 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 451

Query: 423 LINGHCILGGMEEANGVLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKG 482
           +I+G C  G ++EA  +L EM + G  PD+V+YS +I+GFC+    + A ++   +   G
Sbjct: 452 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 511

Query: 483 ISPDAVTYSSLIQGLCQQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKAL 542
           +SP+ + YS+LI   C+   L EA  +++ M+  G + D  T+  L+ + C  G + +A 
Sbjct: 512 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 571

Query: 543 RLHDEMIQKGFSPDIVTYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENC 602
                M   G  P+ V+++ LING        +A  +  ++      P   TY       
Sbjct: 572 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG------ 631

Query: 603 NNLEFKSALALMKGFCMKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAY 662
                    +L+KG C  G + EA++  +S+       +  +YN ++    K GN+ KA 
Sbjct: 632 ---------SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 691

Query: 663 NLYKKMLCFGFVPHSVTIMALAKSLFDEGKDV 691
           +L+ +M+    +P S T  +L   L  +GK V
Sbjct: 692 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

[Close]

BLAST of MS026239 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-92
Identity = 208/719 (28.93%), Postives = 349/719 (48.54%), Query Frame = 0


Query: 28  IVYLRRHPDHLNFLSPHFTPQASSNL---LLKSQFDQNLVVKFLDWARSQRFFSFQCKCL 87
           ++ LRR       L P+     + +L   L+K + D  LV+ F DWARS+R  + +  C+
Sbjct: 65  VIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCI 124

Query: 88  ALHILTRFKLYRTAQSLAE---EVAVNSIDETGAELFQCLKDSYHLCNSSSAVFDLVVKS 147
            +H+    K  + AQSL     E    ++ ++  + F  L  +Y    S   VFD+  + 
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184

Query: 148 YSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEMMGTGISP 207
                L+ +A  +     ++G +  V S N  L  + +       A  VF+E    G+  
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244

Query: 208 NVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKIDEAFGLL 267
           NV +YNI+I   C  G ++        ME  G  P+V++Y+T+++ YC+  ++D+ + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 268 RSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTLINGYCKE 327
             M  KGL+PN   Y  +I  LCR                                 CK 
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCR--------------------------------ICKL 364

Query: 328 GNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLCPNGRTY 387
               +A    ++M++ G+ P+ V YTTLI+  CK G++  A +F  +M  R + P+  TY
Sbjct: 365 AEAEEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 424

Query: 388 TTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANGVLQEMVE 447
           T +I GF Q G + +A ++  EM   G  P  VT+  LING+C  G M++A  V   M++
Sbjct: 425 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 484

Query: 448 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLCQQRKLSE 507
            G  P+VV+Y+T+I G C+  +L+ A +L  EM   G+ P+  TY+S++ GLC+   + E
Sbjct: 485 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 544

Query: 508 ACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIVTYNVLIN 567
           A  L  E  +AGL+ D VTYT+L++AYC  G++DKA  +  EM+ KG  P IVT+NVL+N
Sbjct: 545 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 604

Query: 568 GLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFCMKGLMNE 627
           G        + ++LL  +L +   PN  T+N+L+               K +C++  +  
Sbjct: 605 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV---------------KQYCIRNNLKA 664

Query: 628 ADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSVTIMALAK 687
           A  I++ M  +    +   Y  ++ GH K  N+++A+ L+++M   GF     T   L K
Sbjct: 665 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 724

Query: 688 SLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHKEGNMDAVFNVLKAMAHSGLL 741
                 K +E  ++ +   +     D E+        +K    D + + +  +  + L+
Sbjct: 725 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733

[Close]

BLAST of MS026239 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-92
Identity = 208/719 (28.93%), Postives = 349/719 (48.54%), Query Frame = 0


Query: 28  IVYLRRHPDHLNFLSPHFTPQASSNL---LLKSQFDQNLVVKFLDWARSQRFFSFQCKCL 87
           ++ LRR       L P+     + +L   L+K + D  LV+ F DWARS+R  + +  C+
Sbjct: 65  VIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCI 124

Query: 88  ALHILTRFKLYRTAQSLAE---EVAVNSIDETGAELFQCLKDSYHLCNSSSAVFDLVVKS 147
            +H+    K  + AQSL     E    ++ ++  + F  L  +Y    S   VFD+  + 
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184

Query: 148 YSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEMMGTGISP 207
                L+ +A  +     ++G +  V S N  L  + +       A  VF+E    G+  
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244

Query: 208 NVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKIDEAFGLL 267
           NV +YNI+I   C  G ++        ME  G  P+V++Y+T+++ YC+  ++D+ + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 268 RSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTLINGYCKE 327
             M  KGL+PN   Y  +I  LCR                                 CK 
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCR--------------------------------ICKL 364

Query: 328 GNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLCPNGRTY 387
               +A    ++M++ G+ P+ V YTTLI+  CK G++  A +F  +M  R + P+  TY
Sbjct: 365 AEAEEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 424

Query: 388 TTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANGVLQEMVE 447
           T +I GF Q G + +A ++  EM   G  P  VT+  LING+C  G M++A  V   M++
Sbjct: 425 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 484

Query: 448 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLCQQRKLSE 507
            G  P+VV+Y+T+I G C+  +L+ A +L  EM   G+ P+  TY+S++ GLC+   + E
Sbjct: 485 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 544

Query: 508 ACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIVTYNVLIN 567
           A  L  E  +AGL+ D VTYT+L++AYC  G++DKA  +  EM+ KG  P IVT+NVL+N
Sbjct: 545 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 604

Query: 568 GLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFCMKGLMNE 627
           G        + ++LL  +L +   PN  T+N+L+               K +C++  +  
Sbjct: 605 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV---------------KQYCIRNNLKA 664

Query: 628 ADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSVTIMALAK 687
           A  I++ M  +    +   Y  ++ GH K  N+++A+ L+++M   GF     T   L K
Sbjct: 665 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 724

Query: 688 SLFDEGKDVELNQLLESTLKSCRINDAELAKELVKINHKEGNMDAVFNVLKAMAHSGLL 741
                 K +E  ++ +   +     D E+        +K    D + + +  +  + L+
Sbjct: 725 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733

[Close]

BLAST of MS026239 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 325.9 bits (834), Expect = 8.6e-89
Identity = 173/562 (30.78%), Postives = 298/562 (53.02%), Query Frame = 0


Query: 135 FDLVVKSYSHVNLINKALNIVNLAKSHGFMPGVLSYNAILDAVIRTKQSVKFAEEVFKEM 194
           F  ++ + + +N  +  +++    ++ G    + +Y+ +++   R  Q +  A  V  +M
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ-LSLALAVLAKM 143

Query: 195 MGTGISPNVFTYNILIRGFCSAGNLEMGLSFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
           M  G  P++ T N L+ GFC    +   +S  G+M   G  P+  T+NT+I    +  + 
Sbjct: 144 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 203

Query: 255 DEAFGLLRSMAFKGLEPNLISYNVVINGLCREGRMKDTSDILEEMNRRRYVPDEVTFNTL 314
            EA  L+  M  KG +P+L++Y +V+NGLC+ G +     +L++M + +  P  V +NT+
Sbjct: 204 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 263

Query: 315 INGYCKEGNFHQALVLHADMMKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
           I+  C   N + AL L  +M   G+ PNVVTY +LI  +C  G  + A   L  M +R +
Sbjct: 264 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 323

Query: 375 CPNGRTYTTLIDGFSQQGLLNQAYQVMKEMVENGFTPTIVTYNALINGHCILGGMEEANG 434
            PN  T++ LID F ++G L +A ++  EM++    P I TY++LING C+   ++EA  
Sbjct: 324 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 383

Query: 435 VLQEMVERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVTKGISPDAVTYSSLIQGLC 494
           + + M+ +   P+VV+Y+T+I GFC+ + +++  +L  EM  +G+  + VTY++LI G  
Sbjct: 384 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 443

Query: 495 QQRKLSEACDLFQEMLSAGLSPDEVTYTSLINAYCTEGDLDKALRLHDEMIQKGFSPDIV 554
           Q R+   A  +F++M+S G+ PD +TY+ L++  C  G ++ AL + + + +    PDI 
Sbjct: 444 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 503

Query: 555 TYNVLINGLNKQARTREAKRLLLKLLYEESVPNEVTYNTLIENCNNLEFKSALALMKGFC 614
           TYN++I G+ K  +  +   L   L  +   PN VTY T               +M GFC
Sbjct: 504 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT---------------MMSGFC 563

Query: 615 MKGLMNEADRIFESMLQKDYKTNEAVYNVIIHGHSKVGNIEKAYNLYKKMLCFGFVPHSV 674
            KGL  EAD +F  M ++    +   YN +I  H + G+   +  L ++M    FV  + 
Sbjct: 564 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 623

Query: 675 TIMALAKSLFDEGKDVELNQLL 697
           TI  +   L D   D    ++L
Sbjct: 624 TIGLVTNMLHDGRLDKSFLKML 629

The following BLAST results are available for this feature:

BLAST of MS026239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135848.1	0.0e+00	99.46	pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_...	[more]
XP_022972338.1	0.0e+00	89.91	pentatricopeptide repeat-containing protein At5g39710 [Cucurbita maxima]	[more]
XP_022952422.1	0.0e+00	89.77	pentatricopeptide repeat-containing protein At5g39710 [Cucurbita moschata]	[more]
XP_023511577.1	0.0e+00	89.64	pentatricopeptide repeat-containing protein At5g39710 [Cucurbita pepo subsp. pep...	[more]
KAG6571990.1	0.0e+00	89.37	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of MS026239 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIX3	1.8e-301	66.08	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LVQ5	1.6e-92	31.49	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	1.8e-91	28.93	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9CAN0	1.2e-87	30.78	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]
Q9SXD1	2.1e-87	31.67	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]

BLAST of MS026239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1W8	0.0e+00	99.46	pentatricopeptide repeat-containing protein At5g39710 OS=Momordica charantia OX=...	[more]
A0A6J1I9N0	0.0e+00	89.91	pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GKD6	0.0e+00	89.77	pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita moschata OX=3...	[more]
A0A5D3C4F1	0.0e+00	86.54	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E0J0	0.0e+00	86.41	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g39710-like ...	[more]

BLAST of MS026239 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39710.1	1.3e-302	66.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G55840.1	1.2e-93	31.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	1.3e-92	28.93	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	1.3e-92	28.93	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G63130.1	8.6e-89	30.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 640..671 e-value: 6.6E-8 score: 30.3 coord: 484..518 e-value: 1.2E-10 score: 38.9 coord: 608..636 e-value: 8.2E-4 score: 17.4 coord: 169..203 e-value: 7.3E-4 score: 17.5 coord: 414..448 e-value: 9.1E-8 score: 29.8 coord: 519..553 e-value: 2.8E-11 score: 40.8 coord: 344..377 e-value: 7.0E-11 score: 39.6 coord: 309..343 e-value: 4.3E-11 score: 40.3 coord: 449..483 e-value: 4.0E-9 score: 34.1 coord: 239..272 e-value: 1.3E-9 score: 35.7 coord: 380..412 e-value: 2.2E-8 score: 31.7 coord: 274..308 e-value: 5.3E-8 score: 30.6 coord: 204..238 e-value: 2.6E-11 score: 41.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 640..669 e-value: 6.2E-6 score: 26.1 coord: 608..632 e-value: 0.0025 score: 17.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 306..355 e-value: 2.1E-19 score: 69.5 coord: 380..424 e-value: 3.7E-13 score: 49.5 coord: 236..285 e-value: 7.0E-19 score: 67.8 coord: 165..215 e-value: 9.1E-13 score: 48.2 coord: 446..495 e-value: 6.5E-18 score: 64.7 coord: 516..564 e-value: 6.2E-18 score: 64.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 13.76745
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 482..516 score: 13.67976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..306 score: 12.221907
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 237..271 score: 13.482456
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 12.298636
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 377..411 score: 12.506901
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 552..586 score: 9.689847
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 637..671 score: 11.849223
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 202..236 score: 13.778412
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 517..551 score: 14.951271
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 166..201 score: 9.865228
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 447..481 score: 12.517862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 307..341 score: 13.909947
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 39..195 e-value: 7.0E-8 score: 34.2 coord: 334..405 e-value: 2.6E-24 score: 87.8 coord: 266..333 e-value: 1.8E-21 score: 78.5 coord: 546..607 e-value: 3.6E-11 score: 44.9 coord: 406..475 e-value: 8.1E-20 score: 73.1 coord: 476..545 e-value: 2.2E-24 score: 88.0 coord: 196..265 e-value: 5.9E-25 score: 89.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 608..741 e-value: 1.6E-17 score: 65.9
None	No IPR available	PANTHER	PTHR47933:SF32	OS06G0111300 PROTEIN	coord: 48..449
None	No IPR available	PANTHER	PTHR47933:SF32	OS06G0111300 PROTEIN	coord: 429..494
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 429..494 coord: 484..731
None	No IPR available	PANTHER	PTHR47933:SF32	OS06G0111300 PROTEIN	coord: 484..731
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 48..449
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 488..665

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026239.1	MS026239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding