MS025177 (gene) Bitter gourd (TR) v1

Overview
NameMS025177
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold871: 377510 .. 377749 (-)
RNA-Seq ExpressionMS025177
SyntenyMS025177
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGAATGTCATTTCCCCACCAGTGCCAGATTTGGGACCCTCCGTGTGAAGGCCATTTGAAGCTCAATACTGATGCTTCATGTAGACCTTCTTCTTCGGGTCTGGGGTTTTTTTTGCTCAGGTCTGATGGCGTTTTGGTAGCGGCCAAATCTGTCTTCGTTCCTCATTCCCTTCCACCACACTGCTTGCTGAAATTAAAGGAATTTTGGAAGGTCTGCGGTTTGCTCGATCTATGA

mRNA sequence

ATGCTAAGAATGTCATTTCCCCACCAGTGCCAGATTTGGGACCCTCCGTGTGAAGGCCATTTGAAGCTCAATACTGATGCTTCATGTAGACCTTCTTCTTCGGGTCTGGGGTTTTTTTTGCTCAGGTCTGATGGCGTTTTGGTAGCGGCCAAATCTGTCTTCGTTCCTCATTCCCTTCCACCACACTGCTTGCTGAAATTAAAGGAATTTTGGAAGGTCTGCGGTTTGCTCGATCTATGA

Coding sequence (CDS)

ATGCTAAGAATGTCATTTCCCCACCAGTGCCAGATTTGGGACCCTCCGTGTGAAGGCCATTTGAAGCTCAATACTGATGCTTCATGTAGACCTTCTTCTTCGGGTCTGGGGTTTTTTTTGCTCAGGTCTGATGGCGTTTTGGTAGCGGCCAAATCTGTCTTCGTTCCTCATTCCCTTCCACCACACTGCTTGCTGAAATTAAAGGAATTTTGGAAGGTCTGCGGTTTGCTCGATCTATGA

Protein sequence

MLRMSFPHQCQIWDPPCEGHLKLNTDASCRPSSSGLGFFLLRSDGVLVAAKSVFVPHSLPPHCLLKLKEFWKVCGLLDL
Homology
[Close]
BLAST of MS025177 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04
Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 7   PHQCQIWDPPCEGHLKLNTDASCRPSSSGLGFFLLRSDGVLVAAKSVFVPHSLPP 62
           P  C+ W PP +  +K+N+DA+CR +S+GLG  +    GVL+ AKS+F+P  L P
Sbjct: 110 PPSCR-WLPPRDSAMKVNSDAACRSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNP 163

[Close]
BLAST of MS025177 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04
Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 7   PHQCQIWDPPCEGHLKLNTDASCRPSSSGLGFFLLRSDGVLVAAKSVFVPHSLPP 62
           P  C+ W PP +  +K+N+DA+CR +S+GLG  +    GVL+ AKS+F+P  L P
Sbjct: 110 PPSCR-WLPPRDSAMKVNSDAACRSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNP 163

The following BLAST results are available for this feature:
BLAST of MS025177 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022131661.17.2e-0445.45uncharacterized protein LOC111004786 [Momordica charantia][more]
BLAST of MS025177 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS025177 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BQ493.5e-0445.45uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
BLAST of MS025177 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS025177.1MS025177.1mRNA