MS024853 (gene) Bitter gourd (TR) v1

Overview


Name	MS024853
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cellulose synthase-like protein H1
Location	scaffold176: 1294472 .. 1295182 (+)
RNA-Seq Expression	MS024853
Synteny	MS024853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCTGACCCACTGTATGAAAAAGCAGCCATTAGAAGGCATGCCCAAAGAGCATTGGATCTTACCATCTTCTTCCTCTTGCTTTCTCTTGTGGGTTATCGCCTCCTGTTTCTCTGGAGCCATGGCTTCTCCTATCTCCAAACCATCGCCTTTCTCTGCGAGTCATGGTTCTCCTTCGTCTGGCTTCTCGCCATCATCACCAAGTGGAATCCCGTGGACTACAAAACTTACCCTCATCGCCTCCTCAAACGGTAATTAAACCCACAATTATTTTTTCATTTAATTTGTACCCACATCAGAGCAAATGGGAAAATTTTAAAAGTTTTAATCTTGAGGGTTAAAATGATATATAGGGAGGTGGAGCTTCCGGCGGTGGACATATTCGTGACGACGGCGGATCCGGTGCTGGAACCGCCGATAATAACGGTGAATACGGTGCTGTCTTTGATGGCGATGGATTATCCGGCGAATAAGCTGGCTTGCTATGTTTCCGACGACGGGTGTTCTCCTGTGACGTTCTATTGTCTGAGAGAAGCACTAAAATTTGCAAAGATTTGGGTTCCGTTTTGCAAAAGGTATGAGGTTGAAGTTCGTGCTCCGTTCAGATACTTCTTGAATGGCTTAAAACTGCCCCATGATCTGGAAAAGCCAGCAGAATTCAAAAAAGAGTGGAAAATGATGAAGGTAAGTGACAGTGACGACTGA

mRNA sequence

ATGGCCAAATCTGACCCACTGTATGAAAAAGCAGCCATTAGAAGGCATGCCCAAAGAGCATTGGATCTTACCATCTTCTTCCTCTTGCTTTCTCTTGTGGGTTATCGCCTCCTGTTTCTCTGGAGCCATGGCTTCTCCTATCTCCAAACCATCGCCTTTCTCTGCGAGTCATGGTTCTCCTTCGTCTGGCTTCTCGCCATCATCACCAAGTGGAATCCCGTGGACTACAAAACTTACCCTCATCGCCTCCTCAAACGGGAGGTGGAGCTTCCGGCGGTGGACATATTCGTGACGACGGCGGATCCGGTGCTGGAACCGCCGATAATAACGGTGAATACGGTGCTGTCTTTGATGGCGATGGATTATCCGGCGAATAAGCTGGCTTGCTATGTTTCCGACGACGGGTGTTCTCCTGTGACGTTCTATTGTCTGAGAGAAGCACTAAAATTTGCAAAGATTTGGGTTCCGTTTTGCAAAAGGTATGAGGTTGAAGTTCGTGCTCCGTTCAGATACTTCTTGAATGGCTTAAAACTGCCCCATGATCTGGAAAAGCCAGCAGAATTCAAAAAAGAGTGGAAAATGATGAAGGTAAGTGACAGTGACGACTGA

Coding sequence (CDS)

ATGGCCAAATCTGACCCACTGTATGAAAAAGCAGCCATTAGAAGGCATGCCCAAAGAGCATTGGATCTTACCATCTTCTTCCTCTTGCTTTCTCTTGTGGGTTATCGCCTCCTGTTTCTCTGGAGCCATGGCTTCTCCTATCTCCAAACCATCGCCTTTCTCTGCGAGTCATGGTTCTCCTTCGTCTGGCTTCTCGCCATCATCACCAAGTGGAATCCCGTGGACTACAAAACTTACCCTCATCGCCTCCTCAAACGGGAGGTGGAGCTTCCGGCGGTGGACATATTCGTGACGACGGCGGATCCGGTGCTGGAACCGCCGATAATAACGGTGAATACGGTGCTGTCTTTGATGGCGATGGATTATCCGGCGAATAAGCTGGCTTGCTATGTTTCCGACGACGGGTGTTCTCCTGTGACGTTCTATTGTCTGAGAGAAGCACTAAAATTTGCAAAGATTTGGGTTCCGTTTTGCAAAAGGTATGAGGTTGAAGTTCGTGCTCCGTTCAGATACTTCTTGAATGGCTTAAAACTGCCCCATGATCTGGAAAAGCCAGCAGAATTCAAAAAAGAGTGGAAAATGATGAAGGTAAGTGACAGTGACGACTGA

Protein sequence

MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKPAEFKKEWKMMKVSDSDD

Homology

[Close]

BLAST of MS024853 vs. NCBI nr
Match: XP_022140392.1 (LOW QUALITY PROTEIN: cellulose synthase-like protein H1 [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWF 
Sbjct: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFF 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM
Sbjct: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWV FCKRYEVEVRAPFRYFLNGLKLPH
Sbjct: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVLFCKRYEVEVRAPFRYFLNGLKLPH 180

Query: 181 DLEKPAEFKKEWKMMK 197
            LEKPAEFKKEWKMMK
Sbjct: 181 HLEKPAEFKKEWKMMK 196

[Close]

BLAST of MS024853 vs. NCBI nr
Match: XP_022140393.1 (cellulose synthase-like protein H1 [Momordica charantia])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 178/196 (90.82%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKS  LYEK AI+R  QRALD  IFFLLLSLVGYR +FL SHGFSYLQT+AFLCESWFS
Sbjct: 1   MAKSLSLYEKTAIKRPTQRALDFAIFFLLLSLVGYRFMFLSSHGFSYLQTMAFLCESWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVWLLAII KWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM
Sbjct: 61  FVWLLAIIIKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYPA KLACYVSDDGCSPVTFY LREALKFAKIWVPFCK+YEVEVRAPFRYFLNG KLPH
Sbjct: 121 DYPAKKLACYVSDDGCSPVTFYSLREALKFAKIWVPFCKKYEVEVRAPFRYFLNGSKLPH 180

Query: 181 DLEKPAEFKKEWKMMK 197
           DLE+PAEFKKEWKMMK
Sbjct: 181 DLERPAEFKKEWKMMK 196

[Close]

BLAST of MS024853 vs. NCBI nr
Match: XP_038902792.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.3e-78
Identity = 147/197 (74.62%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MA S  LYEK  I+R  QRALD+ IFFLL+ L+GYR+L ++ HGFSYLQTIA LCE+WF+
Sbjct: 1   MANSLSLYEKEIIKRSTQRALDIAIFFLLVCLIGYRVLLVFKHGFSYLQTIALLCETWFT 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LAIITKWNPVDYKTYPHRLLKREVE+PAVDIFVTT DPVLEP IITVNTVLSLMA+
Sbjct: 61  FVWFLAIITKWNPVDYKTYPHRLLKREVEVPAVDIFVTTVDPVLEPSIITVNTVLSLMAL 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYPANKL+CYVSDDGCS +T Y L EA+KFAKIWVPFCK+YEVEV APFRYFLN   LPH
Sbjct: 121 DYPANKLSCYVSDDGCSALTLYALSEAVKFAKIWVPFCKKYEVEVGAPFRYFLNASTLPH 180

Query: 181 DLEKPAEFKKEWKMMKV 198
            L    +F+ +W+ +KV
Sbjct: 181 -LHSSPQFQNDWQTVKV 196

[Close]

BLAST of MS024853 vs. NCBI nr
Match: XP_038900388.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-78
Identity = 147/197 (74.62%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MA + PLYEK  I+R  QRALD+ IFFLLLSLV YRLL L++HGFS+LQTIAFLCESWFS
Sbjct: 1   MANTLPLYEKTIIKRPTQRALDIAIFFLLLSLVSYRLLLLFNHGFSHLQTIAFLCESWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LA+I KWNPVDYKTYP RLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMA+
Sbjct: 61  FVWFLAVIIKWNPVDYKTYPQRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAL 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYP NKL+CY+SDDGCS +TFY L E + FAK+WVPFCK+YEVE+RAPFRYFLN    P 
Sbjct: 121 DYPTNKLSCYISDDGCSAMTFYALSETVNFAKMWVPFCKKYEVEIRAPFRYFLN--DSPM 180

Query: 181 DLEKPAEFKKEWKMMKV 198
                 +F+ +WK +KV
Sbjct: 181 HFHSSPQFQHDWKTVKV 195

[Close]

BLAST of MS024853 vs. NCBI nr
Match: XP_038900389.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 2.3e-78
Identity = 146/197 (74.11%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MA + PLYEK  I+R  QRALD+ IFFLLLSLV YRLL L++HGFS+LQTIAFLCESWFS
Sbjct: 1   MANTLPLYEKTIIKRPTQRALDIAIFFLLLSLVSYRLLLLFNHGFSHLQTIAFLCESWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LA+I KWNPVDYKTYP RLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMA+
Sbjct: 61  FVWFLAVIIKWNPVDYKTYPQRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAL 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYP NKL+CY+SDDGCS +TFY L E + FAK+WVPFCK+YEVE+RAPFRYFLN    P 
Sbjct: 121 DYPTNKLSCYISDDGCSAMTFYALSETVNFAKMWVPFCKKYEVEIRAPFRYFLN--DSPM 180

Query: 181 DLEKPAEFKKEWKMMKV 198
                 +F+ +WK +K+
Sbjct: 181 HFHSSPQFQHDWKTVKI 195

[Close]

BLAST of MS024853 vs. ExPASy Swiss-Prot
Match: O80899 (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 113/191 (59.16%), Postives = 148/191 (77.49%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PLYE  + + +  RA+DLTI  LL SL+ +R+L++  +G  +L  +AFLCES FSFVWLL
Sbjct: 10  PLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWL--VAFLCESCFSFVWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
           +  TKW+P + K YP RL +R  +LP+VD+FV TADPV EPPI+ VNTVLSL+A++YPAN
Sbjct: 70  STCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y ++VRAPFRYFLN    P    + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLN----PFAATEG 189

Query: 186 AEFKKEWKMMK 197
           +EF ++W+M K
Sbjct: 190 SEFSRDWEMTK 194

[Close]

BLAST of MS024853 vs. ExPASy Swiss-Prot
Match: Q8RX83 (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.4e-56
Identity = 108/191 (56.54%), Postives = 144/191 (75.39%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL EK + + +  R +DLTI   L SL+ YR+L +  +   ++  +AFLCES+FSF+WLL
Sbjct: 10  PLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWV--VAFLCESFFSFIWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P  YK+YP RL +R  +LP+VD+FVTTADPV EPPI+  NT+LSL+A++YPAN
Sbjct: 70  ITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y ++VRAPFRYFLN    P    + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFLN----PPAATES 189

Query: 186 AEFKKEWKMMK 197
           +EF K+W++ K
Sbjct: 190 SEFSKDWEITK 194

[Close]

BLAST of MS024853 vs. ExPASy Swiss-Prot
Match: O80891 (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=CSLB4 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.4e-56
Identity = 113/191 (59.16%), Postives = 143/191 (74.87%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL E+ + + +  RA+DLTI  LLLSL+ YR+L +      ++  +AFLCE+ F+FVWLL
Sbjct: 10  PLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWI--VAFLCETCFTFVWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P DYKTYP RL +R  ELP VD+FVTTADPV EPP+I VNTVLSL+A++YPAN
Sbjct: 70  ITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y V VRAPF YF N      +  + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYFRNS----PEAAEG 189

Query: 186 AEFKKEWKMMK 197
           +EF K+W+M K
Sbjct: 190 SEFSKDWEMTK 194

[Close]

BLAST of MS024853 vs. ExPASy Swiss-Prot
Match: O23386 (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55
Identity = 111/191 (58.12%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL E+ + + +  R +DLTI  LL SL+ YR+L +  +   +L  +AFLCES FSF+WL+
Sbjct: 10  PLCERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWL--VAFLCESCFSFMWLI 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P + K YP+RL +R  +LP+VD+FV TADPV EPPII VNTVLSL+A++YPAN
Sbjct: 70  ITCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KF KIW PFCK+Y V VRAPFRYFLN L    D    
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDD---- 189

Query: 186 AEFKKEWKMMK 197
           + F K+WKMMK
Sbjct: 190 SVFSKDWKMMK 194

[Close]

BLAST of MS024853 vs. ExPASy Swiss-Prot
Match: Q339N5 (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-51
Identity = 107/192 (55.73%), Postives = 136/192 (70.83%), Query Frame = 0


Query: 7   LYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLLA 66
           L E+  IRR A R  DL I FLLL+L+ +R+L     G  + +  A  CE+WF+F+WLL 
Sbjct: 11  LQERVPIRRTAWRLADLAILFLLLALLLHRVLH--DSGAPW-RRAALACEAWFTFMWLLN 70

Query: 67  IITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPA-- 126
           +  KW+PV + T+P  L +R  ELPAVD+FVTTADPVLEPP++TVNTVLSL+A+DYPA  
Sbjct: 71  VNAKWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAG 130

Query: 127 NKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEK 186
            KLACYVSDDGCSP+T Y LREA +FA+ WVPFC+R+ V VRAPFRYF +    P     
Sbjct: 131 EKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSS---TPEFGPA 190

Query: 187 PAEFKKEWKMMK 197
             +F ++W  MK
Sbjct: 191 DGKFLEDWTFMK 196

[Close]

BLAST of MS024853 vs. ExPASy TrEMBL
Match: A0A6J1CGT0 (LOW QUALITY PROTEIN: cellulose synthase-like protein H1 OS=Momordica charantia OX=3673 GN=LOC111011080 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWF 
Sbjct: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFF 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM
Sbjct: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWV FCKRYEVEVRAPFRYFLNGLKLPH
Sbjct: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVLFCKRYEVEVRAPFRYFLNGLKLPH 180

Query: 181 DLEKPAEFKKEWKMMK 197
            LEKPAEFKKEWKMMK
Sbjct: 181 HLEKPAEFKKEWKMMK 196

[Close]

BLAST of MS024853 vs. ExPASy TrEMBL
Match: A0A6J1CHW9 (cellulose synthase-like protein H1 OS=Momordica charantia OX=3673 GN=LOC111011082 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 178/196 (90.82%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKS  LYEK AI+R  QRALD  IFFLLLSLVGYR +FL SHGFSYLQT+AFLCESWFS
Sbjct: 1   MAKSLSLYEKTAIKRPTQRALDFAIFFLLLSLVGYRFMFLSSHGFSYLQTMAFLCESWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVWLLAII KWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM
Sbjct: 61  FVWLLAIIIKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYPA KLACYVSDDGCSPVTFY LREALKFAKIWVPFCK+YEVEVRAPFRYFLNG KLPH
Sbjct: 121 DYPAKKLACYVSDDGCSPVTFYSLREALKFAKIWVPFCKKYEVEVRAPFRYFLNGSKLPH 180

Query: 181 DLEKPAEFKKEWKMMK 197
           DLE+PAEFKKEWKMMK
Sbjct: 181 DLERPAEFKKEWKMMK 196

[Close]

BLAST of MS024853 vs. ExPASy TrEMBL
Match: A0A0A0LQD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416240 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.2e-78
Identity = 147/197 (74.62%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKS PLYEK  I+R  QR LD+TIF LL+SL GYR+L +++HGFSYLQTIAFLCE WFS
Sbjct: 1   MAKSLPLYEKTNIKRSTQRVLDITIFILLVSLDGYRVLLIYNHGFSYLQTIAFLCEFWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LAII KWNPV Y+TYP RLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMA+
Sbjct: 61  FVWFLAIIIKWNPVHYETYPQRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAL 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYP+NKL CYVSDDGCS +T Y L+EALKF KIWVPFCK+YE++VRAPFRYF +    P 
Sbjct: 121 DYPSNKLGCYVSDDGCSSLTLYALKEALKFGKIWVPFCKKYEIQVRAPFRYFSS----PP 180

Query: 181 DLEKPAEFKKEWKMMKV 198
            L   AEF+ +W+M+KV
Sbjct: 181 HLHTSAEFRNDWQMVKV 193

[Close]

BLAST of MS024853 vs. ExPASy TrEMBL
Match: A0A5A7SVW8 (Cellulose synthase-like protein H1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00240 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.5e-78
Identity = 143/197 (72.59%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKS PLYEK  I+R  QRALD+ IF LL+SLV YR+L +++HGFS+LQTIAFLCE WFS
Sbjct: 1   MAKSLPLYEKLIIKRPTQRALDIAIFILLISLVAYRVLLMYNHGFSHLQTIAFLCEFWFS 60

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LAI+T+WNPVD+KTYP RLLKREVE PAVDIFVTTADP+LEPPIITVNTVLSLMA+
Sbjct: 61  FVWFLAIVTRWNPVDFKTYPQRLLKREVEYPAVDIFVTTADPMLEPPIITVNTVLSLMAL 120

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYP+NKL+CYVSDDGCSP+TFY L EAL FAKIW+PFCK+Y+V+VRAPF YF      PH
Sbjct: 121 DYPSNKLSCYVSDDGCSPLTFYALNEALNFAKIWIPFCKKYDVQVRAPFMYFSTP---PH 180

Query: 181 DLEKPAEFKKEWKMMKV 198
            L    +F+ +WK +KV
Sbjct: 181 HLHSSTQFQYDWKTLKV 194

[Close]

BLAST of MS024853 vs. ExPASy TrEMBL
Match: A0A1S3C1K4 (cellulose synthase-like protein H1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495979 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.5e-78
Identity = 143/197 (72.59%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAKSDPLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFS 60
           MAKS PLYEK  I+R  QRALD+ IF LL+SLV YR+L +++HGFS+LQTIAFLCE WFS
Sbjct: 9   MAKSLPLYEKLIIKRPTQRALDIAIFILLISLVAYRVLLMYNHGFSHLQTIAFLCEFWFS 68

Query: 61  FVWLLAIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAM 120
           FVW LAI+T+WNPVD+KTYP RLLKREVE PAVDIFVTTADP+LEPPIITVNTVLSLMA+
Sbjct: 69  FVWFLAIVTRWNPVDFKTYPQRLLKREVEYPAVDIFVTTADPMLEPPIITVNTVLSLMAL 128

Query: 121 DYPANKLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPH 180
           DYP+NKL+CYVSDDGCSP+TFY L EAL FAKIW+PFCK+Y+V+VRAPF YF      PH
Sbjct: 129 DYPSNKLSCYVSDDGCSPLTFYALNEALNFAKIWIPFCKKYDVQVRAPFMYFSTP---PH 188

Query: 181 DLEKPAEFKKEWKMMKV 198
            L    +F+ +WK +KV
Sbjct: 189 HLHSSTQFQYDWKTLKV 202

[Close]

BLAST of MS024853 vs. TAIR 10
Match: AT2G32620.1 (cellulose synthase-like B )

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-59
Identity = 113/191 (59.16%), Postives = 148/191 (77.49%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PLYE  + + +  RA+DLTI  LL SL+ +R+L++  +G  +L  +AFLCES FSFVWLL
Sbjct: 10  PLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWL--VAFLCESCFSFVWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
           +  TKW+P + K YP RL +R  +LP+VD+FV TADPV EPPI+ VNTVLSL+A++YPAN
Sbjct: 70  STCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y ++VRAPFRYFLN    P    + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLN----PFAATEG 189

Query: 186 AEFKKEWKMMK 197
           +EF ++W+M K
Sbjct: 190 SEFSRDWEMTK 194

[Close]

BLAST of MS024853 vs. TAIR 10
Match: AT2G32530.1 (cellulose synthase-like B3 )

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 108/191 (56.54%), Postives = 144/191 (75.39%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL EK + + +  R +DLTI   L SL+ YR+L +  +   ++  +AFLCES+FSF+WLL
Sbjct: 10  PLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWV--VAFLCESFFSFIWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P  YK+YP RL +R  +LP+VD+FVTTADPV EPPI+  NT+LSL+A++YPAN
Sbjct: 70  ITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y ++VRAPFRYFLN    P    + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFLN----PPAATES 189

Query: 186 AEFKKEWKMMK 197
           +EF K+W++ K
Sbjct: 190 SEFSKDWEITK 194

[Close]

BLAST of MS024853 vs. TAIR 10
Match: AT2G32540.1 (cellulose synthase-like B4 )

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 113/191 (59.16%), Postives = 143/191 (74.87%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL E+ + + +  RA+DLTI  LLLSL+ YR+L +      ++  +AFLCE+ F+FVWLL
Sbjct: 10  PLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWI--VAFLCETCFTFVWLL 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P DYKTYP RL +R  ELP VD+FVTTADPV EPP+I VNTVLSL+A++YPAN
Sbjct: 70  ITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KFAKIWVPFCK+Y V VRAPF YF N      +  + 
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYFRNS----PEAAEG 189

Query: 186 AEFKKEWKMMK 197
           +EF K+W+M K
Sbjct: 190 SEFSKDWEMTK 194

[Close]

BLAST of MS024853 vs. TAIR 10
Match: AT4G15320.1 (cellulose synthase-like B6 )

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 111/192 (57.81%), Postives = 142/192 (73.96%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL E+ + + +  R +DLTI  LL SL+ YR+L +  +   +L  +AFLCES FSF+WL+
Sbjct: 10  PLCERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWL--VAFLCESCFSFMWLI 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P + K YP+RL +R  +LP+VD+FV TADPV EPPII VNTVLSL+A++YPAN
Sbjct: 70  ITCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KF KIW PFCK+Y V VRAPFRYFLN L    D    
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDD---- 189

Query: 186 AEFKKEWKMMKV 198
           + F K+WKMMK+
Sbjct: 190 SVFSKDWKMMKI 195

[Close]

BLAST of MS024853 vs. TAIR 10
Match: AT4G15290.1 (Cellulose synthase family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51
Identity = 106/191 (55.50%), Postives = 136/191 (71.20%), Query Frame = 0


Query: 6   PLYEKAAIRRHAQRALDLTIFFLLLSLVGYRLLFLWSHGFSYLQTIAFLCESWFSFVWLL 65
           PL E+ + + +  RA+DLTI  LL SL+ YR+L +  +   +L  +AF CES FS VWL+
Sbjct: 10  PLCERISHKSYVLRAVDLTILGLLYSLLLYRILHISENDNVWL--LAFFCESCFSLVWLI 69

Query: 66  AIITKWNPVDYKTYPHRLLKREVELPAVDIFVTTADPVLEPPIITVNTVLSLMAMDYPAN 125
               KW+P +   Y + L +R  +LP++D+FV TAD V E PIITVNTVLSL+A++YPAN
Sbjct: 70  FTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPAN 129

Query: 126 KLACYVSDDGCSPVTFYCLREALKFAKIWVPFCKRYEVEVRAPFRYFLNGLKLPHDLEKP 185
           KLACYVSDDGCSP+T++ L+EA KF KIW PFCK+Y V VRAPFRYFLN L    D    
Sbjct: 130 KLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDD---- 189

Query: 186 AEFKKEWKMMK 197
           + F K+WKMMK
Sbjct: 190 SVFSKDWKMMK 194

The following BLAST results are available for this feature:

BLAST of MS024853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140392.1	1.3e-105	98.47	LOW QUALITY PROTEIN: cellulose synthase-like protein H1 [Momordica charantia]	[more]
XP_022140393.1	4.1e-96	90.82	cellulose synthase-like protein H1 [Momordica charantia]	[more]
XP_038902792.1	1.3e-78	74.62	cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]	[more]
XP_038900388.1	1.8e-78	74.62	cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]	[more]
XP_038900389.1	2.3e-78	74.11	cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]	[more]

BLAST of MS024853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80899	2.1e-58	59.16	Cellulose synthase-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=CSLB2 PE=2...	[more]
Q8RX83	4.4e-56	56.54	Cellulose synthase-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=CSLB3 PE=2...	[more]
O80891	4.4e-56	59.16	Cellulose synthase-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=CSLB4 PE=3...	[more]
O23386	1.3e-55	58.12	Cellulose synthase-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=CSLB6 PE=2...	[more]
Q339N5	9.4e-51	55.73	Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of MS024853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGT0	6.2e-106	98.47	LOW QUALITY PROTEIN: cellulose synthase-like protein H1 OS=Momordica charantia O...	[more]
A0A6J1CHW9	2.0e-96	90.82	cellulose synthase-like protein H1 OS=Momordica charantia OX=3673 GN=LOC11101108...	[more]
A0A0A0LQD3	3.2e-78	74.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416240 PE=4 SV=1	[more]
A0A5A7SVW8	5.5e-78	72.59	Cellulose synthase-like protein H1 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C1K4	5.5e-78	72.59	cellulose synthase-like protein H1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of MS024853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32620.1	1.5e-59	59.16	cellulose synthase-like B	[more]
AT2G32530.1	3.1e-57	56.54	cellulose synthase-like B3	[more]
AT2G32540.1	3.1e-57	59.16	cellulose synthase-like B4	[more]
AT4G15320.1	3.1e-57	57.81	cellulose synthase-like B6	[more]
AT4G15290.1	3.3e-51	55.50	Cellulose synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 82..171 e-value: 8.4E-6 score: 27.0
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 93..196 e-value: 3.1E-34 score: 118.6
None	No IPR available	PANTHER	PTHR13301:SF53	CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED	coord: 5..195
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 5..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024853.1	MS024853.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity